Psyllid ID: psy18117

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
Protein Sequence
MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHccccccccccccccHHHHHHHcccccccccccHHHHccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccEEcccccc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccccccccHcHcEEccHHccccHHHHHHHcHHcccccccccHHHHHccccccHHHHHHHHHHHHHHHHHccHcccccccHHHHHHHHHHcccccccHHccHHHHHcccHHHHHHHHHHHHcccccccHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccc
Coil and Loop (DISEMBL)
msvktssvdsflgtpyymsperlkelkysfpsdvwsLGCVLYEvdsflgtpyymsperlkelkysfpsdvwsLGCVLYEMVALqspffskhisLNGLCKRiemalfpplpsgvlysdktlhhpnIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Flexible Loop (DISEMBL)
msvktssvdsflgtpyymSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Low Complexity Region (SEG)
MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Disordered region (IsUnstruct)
**********FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRT******
Disordered Region (DISOPRED)
**********FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP******LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLAL************AECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQ**
Disordered Region (DISEMBL)
*********SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Disordered Region (DISPRO)
*********SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVL************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	215	2.2.26 [Sep-21-2011]
Q9ES74	302	Serine/threonine-protein	yes	N/A	0.288	0.205	0.636	4e-20
Q8TDX7	302	Serine/threonine-protein	yes	N/A	0.288	0.205	0.636	4e-20
D3ZBE5	302	Serine/threonine-protein	yes	N/A	0.288	0.205	0.636	5e-20
Q9HC98	313	Serine/threonine-protein	no	N/A	0.334	0.230	0.602	1e-19
P59895	313	Serine/threonine-protein	no	N/A	0.334	0.230	0.602	1e-19
A2BD05	313	Serine/threonine-protein	no	N/A	0.334	0.230	0.602	1e-19
Q9ES70	313	Serine/threonine-protein	no	N/A	0.334	0.230	0.602	1e-19
Q55BN8	418	Probable serine/threonine	yes	N/A	0.297	0.153	0.469	3e-12
Q9CAU7	606	Serine/threonine-protein	yes	N/A	0.348	0.123	0.437	1e-11
P51955	445	Serine/threonine-protein	no	N/A	0.367	0.177	0.389	3e-11

>sp|Q9ES74|NEK7_MOUSE Serine/threonine-protein kinase Nek7 OS=Mus musculus GN=Nek7 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 255 YPPLPS 260

Protein kinase which plays an important role in mitotic cell cycle progression. Required for microtubule nucleation activity of the centrosome, robust mitotic spindle formation and cytokinesis. Phosphorylates RPS6KB1.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8TDX7|NEK7_HUMAN Serine/threonine-protein kinase Nek7 OS=Homo sapiens GN=NEK7 PE=1 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 255 YPPLPS 260

Protein kinase which plays an important role in mitotic cell cycle progression. Required for microtubule nucleation activity of the centrosome, robust mitotic spindle formation and cytokinesis. Phosphorylates RPS6KB1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|D3ZBE5|NEK7_RAT Serine/threonine-protein kinase Nek7 OS=Rattus norvegicus GN=Nek7 PE=2 SV=1

 Score = 97.8 bits (242), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 255 YPPLPS 260

Protein kinase which plays an important role in mitotic cell cycle progression. Required for microtubule nucleation activity of the centrosome, robust mitotic spindle formation and cytokinesis. Phosphorylates RPS6KB1. releasing the autoinhibitory function of Tyr-97.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9HC98|NEK6_HUMAN Serine/threonine-protein kinase Nek6 OS=Homo sapiens GN=NEK6 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct: 206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query: 106 FPPLPSGVLYSDK 118
           +PPLP G  YS+K
Sbjct: 266 YPPLP-GEHYSEK 277

Protein kinase which plays an important role in mitotic cell cycle progression. Required for chromosome segregation at metaphase-anaphase transition, robust mitotic spindle formation and cytokinesis. Phosphorylates ATF4, CIR1, PTN, RAD26L, RBBP6, RPS7, RPS6KB1, TRIP4, STAT3 and histones H1 and H3. Phosphorylates KIF11 to promote mitotic spindle formation. Involved in G2/M phase cell cycle arrest induced by DNA damage. Inhibition of activity results in apoptosis. May contribute to tumorigenesis by suppressing p53/TP53-induced cancer cell senescence.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P59895|NEK6_RAT Serine/threonine-protein kinase Nek6 OS=Rattus norvegicus GN=Nek6 PE=1 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct: 206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query: 106 FPPLPSGVLYSDK 118
           +PPLP G  YS+K
Sbjct: 266 YPPLP-GEHYSEK 277

Protein kinase which plays an important role in mitotic cell cycle progression. Required for chromosome segregation at metaphase-anaphase transition, robust mitotic spindle formation and cytokinesis. Phosphorylates ATF4, CIR1, PTN, RAD26L, RBBP6, RPS7, TRIP4, STAT3 and histones H1 and H3. Phosphorylates KIF11 to promote mitotic spindle formation. Involved in G2/M phase cell cycle arrest induced by DNA damage. Inhibition of activity results in apoptosis. May contribute to tumorigenesis by suppressing p53/TP53-induced cancer cell senescence (By similarity). Phosphorylates RPS6KB1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2BD05|NEK6_PIG Serine/threonine-protein kinase Nek6 OS=Sus scrofa GN=NEK6 PE=3 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct: 206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query: 106 FPPLPSGVLYSDK 118
           +PPLP G  YS+K
Sbjct: 266 YPPLP-GEHYSEK 277

Protein kinase which plays an important role in mitotic cell cycle progression. Required for chromosome segregation at metaphase-anaphase transition, robust mitotic spindle formation and cytokinesis. Phosphorylates ATF4, CIR1, PTN, RAD26L, RBBP6, RPS7, RPS6KB1, TRIP4, STAT3 and histones H1 and H3. Phosphorylates KIF11 to promote mitotic spindle formation. Involved in G2/M phase cell cycle arrest induced by DNA damage. Inhibition of activity results in apoptosis. May contribute to tumorigenesis by suppressing p53/TP53-induced cancer cell senescence.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ES70|NEK6_MOUSE Serine/threonine-protein kinase Nek6 OS=Mus musculus GN=Nek6 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct: 206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query: 106 FPPLPSGVLYSDK 118
           +PPLP G  YS+K
Sbjct: 266 YPPLP-GEHYSEK 277

Protein kinase which plays an important role in mitotic cell cycle progression. Required for chromosome segregation at metaphase-anaphase transition, robust mitotic spindle formation and cytokinesis. Phosphorylates ATF4, CIR1, PTN, RAD26L, RBBP6, RPS7, TRIP4, RPS6KB1 and histones H1 and H3. Phosphorylates KIF11 to promote mitotic spindle formation. Involved in G2/M phase cell cycle arrest induced by DNA damage. Inhibition of activity results in apoptosis. May contribute to tumorigenesis by suppressing p53/TP53-induced cancer cell senescence (By similarity). Phosphorylates STAT3.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q55BN8|NEK2_DICDI Probable serine/threonine-protein kinase nek2 OS=Dictyostelium discoideum GN=nek2 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  LKY+  SDVWS+GC++YEM  L  PF + + +   L  +I++  
Sbjct: 168 TFVGTPYYMSPEQIHGLKYNERSDVWSVGCLIYEMATLSPPFEATNQA--QLTSKIQVGR 225

Query: 106 FPPLPS 111
           + P+PS
Sbjct: 226 YNPIPS 231

Involved in centrosome biogenesis. Seems to be required for recruitment of centrosomal material and might be involved in de novo centrosome formation.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAU7|NEK2_ARATH Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana GN=NEK2 PE=2 SV=1

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 35  WSLGCVLYEVD---SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + L  VL   D   S +GTP YM PE L ++ Y   SD+WSLGC +YEM A++  F  K 
Sbjct: 148 FGLAKVLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCMYEMTAMKPAF--KA 205

Query: 92  ISLNGLCKRIEMALFPPLPS 111
             + GL  RI  ++ PPLP+
Sbjct: 206 FDMQGLINRINRSIVPPLPA 225

May be involved in plant development processes.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P51955|NEK2_HUMAN Serine/threonine-protein kinase Nek2 OS=Homo sapiens GN=NEK2 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 16/95 (16%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232

Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
           F  +P    YSD            K  H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265

Protein kinase which is involved in the control of centrosome separation and bipolar spindle formation in mitotic cells and chromatin condensation in meiotic cells. Regulates centrosome separation (essential for the formation of bipolar spindles and high-fidelity chromosome separation) by phosphorylating centrosomal proteins such as CROCC, CEP250 and NINL, resulting in their displacement from the centrosomes. Regulates kinetochore microtubule attachment stability in mitosis via phosphorylation of NDC80. Involved in regulation of mitotic checkpoint protein complex via phosphorylation of CDC20 and MAD2L1. Plays an active role in chromatin condensation during the first meiotic division through phosphorylation of HMGA2. Phosphorylates: PPP1CC; SGOL1; NECAB3 and NPM1. Essential for localization of MAD2L1 to kinetochore and MAPK1 and NPM1 to the centrosome. Isoform 1 phosphorylates and activates NEK11 in G1/S-arrested cells. Isoform 2, which is not present in the nucleolus, does not.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
328774279	303	hypothetical protein BATDEDRAFT_85310 [B	0.348	0.247	0.605	1e-19
260803069	299	hypothetical protein BRAFLDRAFT_121258 [	0.367	0.264	0.6	1e-19
321470384	311	hypothetical protein DAPPUDRAFT_50099 [D	0.302	0.209	0.626	4e-19
326431587	294	NEK/NEK6 protein kinase [Salpingoeca sp.	0.306	0.224	0.602	5e-19
156365628	289	predicted protein [Nematostella vectensi	0.288	0.214	0.636	5e-19
167535083	309	hypothetical protein [Monosiga brevicoll	0.334	0.233	0.602	6e-19
354485115	422	PREDICTED: serine/threonine-protein kina	0.288	0.146	0.636	1e-18
402594742	312	other/NEK/NEK6 protein kinase [Wuchereri	0.297	0.205	0.588	1e-18
443703146	291	hypothetical protein CAPTEDRAFT_105438 [	0.316	0.233	0.597	1e-18
170586105	312	Serine/threonine-protein kinase Nek7 [Br	0.306	0.211	0.588	1e-18

>gi|328774279|gb|EGF84316.1| hypothetical protein BATDEDRAFT_85310 [Batrachochytrium dendrobatidis JAM81]

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 43  EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
           E  S +GTPYYMSPER+ E  YSF SD+WSLGC+LYEM AL SPF+   ++L GLC++IE
Sbjct: 184 EAHSLVGTPYYMSPERIHEAGYSFQSDIWSLGCLLYEMAALHSPFYGDKMTLAGLCRKIE 243

Query: 103 MALFPPLPSGVLYSDK 118
              +PPLPS  LYS++
Sbjct: 244 ACDYPPLPS-ELYSEE 258

Source: Batrachochytrium dendrobatidis JAM81

Species: Batrachochytrium dendrobatidis

Genus: Batrachochytrium

Order: Rhizophydiales

Class: Chytridiomycetes

Phylum: Chytridiomycota

Superkingdom: Eukaryota

>gi|260803069|ref|XP_002596414.1| hypothetical protein BRAFLDRAFT_121258 [Branchiostoma floridae] gi|20302767|gb|AAM18889.1|AF391294_3 unknown [Branchiostoma floridae] gi|229281669|gb|EEN52426.1| hypothetical protein BRAFLDRAFT_121258 [Branchiostoma floridae]

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 1/80 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 187 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 246

Query: 106 FPPLPSGVLYSDKTLHHPNI 125
           +PPLPS   YSD+  H  NI
Sbjct: 247 YPPLPSE-HYSDELRHLVNI 265

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|321470384|gb|EFX81360.1| hypothetical protein DAPPUDRAFT_50099 [Daphnia pulex]

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 53/67 (79%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPERLK+  Y F SD+WSLGC+LYEM ALQSPF+ + I+L  LC++IE   
Sbjct: 180 SLVGTPYYMSPERLKQTGYDFKSDIWSLGCLLYEMAALQSPFYGEKINLFSLCQKIERCE 239

Query: 106 FPPLPSG 112
           +PP+PS 
Sbjct: 240 YPPIPSA 246

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326431587|gb|EGD77157.1| NEK/NEK6 protein kinase [Salpingoeca sp. ATCC 50818]

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 53/68 (77%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER++E  Y F SD+WSLGC+LYEM ALQSPF+   ++L  LC++I+   
Sbjct: 185 SLVGTPYYMSPERIREQPYDFASDIWSLGCLLYEMAALQSPFYGDQLNLYSLCRKIDKCA 244

Query: 106 FPPLPSGV 113
           +PPLPS V
Sbjct: 245 YPPLPSDV 252

Source: Salpingoeca sp. ATCC 50818

Species: Salpingoeca sp. ATCC 50818

Genus: Salpingoeca

Family: Salpingoecidae

Order: Choanoflagellida

Superkingdom: Eukaryota

>gi|156365628|ref|XP_001626746.1| predicted protein [Nematostella vectensis] gi|156213634|gb|EDO34646.1| predicted protein [Nematostella vectensis]

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 53/66 (80%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+KE  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 182 SLVGTPYYMSPERIKENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 241

Query: 106 FPPLPS 111
           +PPLP+
Sbjct: 242 YPPLPA 247

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|167535083|ref|XP_001749216.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772369|gb|EDQ86022.1| predicted protein [Monosiga brevicollis MX1]

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER++E  Y F SD+WSLGC+LYEM ALQSPF+   +SL  LCK+I+   
Sbjct: 188 SLVGTPYYMSPERIREQPYHFASDIWSLGCLLYEMAALQSPFYGDQLSLYTLCKKIDKCA 247

Query: 106 FPPLPSGVLYSDK 118
           +PPLP+  LYS++
Sbjct: 248 YPPLPAD-LYSEQ 259

Source: Monosiga brevicollis MX1

Species: Monosiga brevicollis

Genus: Monosiga

Family: Codonosigidae

Order: Choanoflagellida

Superkingdom: Eukaryota

>gi|354485115|ref|XP_003504729.1| PREDICTED: serine/threonine-protein kinase Nek7-like [Cricetulus griseus]

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 315 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 374

Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 375 YPPLPS 380

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402594742|gb|EJW88668.1| other/NEK/NEK6 protein kinase [Wuchereria bancrofti]

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 54/68 (79%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER++E  Y+F SD+WS+GC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 177 SLVGTPYYMSPERIQENGYNFKSDLWSIGCLLYEMAALQSPFYGDKLNLYSLCKKIENCE 236

Query: 106 FPPLPSGV 113
           +PPLP+ +
Sbjct: 237 YPPLPADI 244

Source: Wuchereria bancrofti

Species: Wuchereria bancrofti

Genus: Wuchereria

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|443703146|gb|ELU00857.1| hypothetical protein CAPTEDRAFT_105438 [Capitella teleta]

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 54/72 (75%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 181 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 240

Query: 106 FPPLPSGVLYSD 117
           +PPLPS    +D
Sbjct: 241 YPPLPSEYYSAD 252

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|170586105|ref|XP_001897821.1| Serine/threonine-protein kinase Nek7 [Brugia malayi] gi|158594760|gb|EDP33341.1| Serine/threonine-protein kinase Nek7, putative [Brugia malayi]

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 54/68 (79%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER++E  Y+F SD+WS+GC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 177 SLVGTPYYMSPERIQENGYNFKSDLWSIGCLLYEMAALQSPFYGDKLNLYSLCKKIENCE 236

Query: 106 FPPLPSGV 113
           +PPLP+ +
Sbjct: 237 YPPLPADI 244

Source: Brugia malayi

Species: Brugia malayi

Genus: Brugia

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	215
MGI|MGI:1890645	302	Nek7 "NIMA (never in mitosis g	0.367	0.261	0.575	2.1e-20
RGD|1311160	302	Nek7 "NIMA-related kinase 7" [	0.367	0.261	0.575	2.1e-20
UNIPROTKB|E2R2U0	302	NEK7 "Uncharacterized protein"	0.334	0.238	0.602	3.5e-20
UNIPROTKB|Q8TDX7	302	NEK7 "Serine/threonine-protein	0.334	0.238	0.602	3.5e-20
UNIPROTKB|J9NX17	313	NEK6 "Uncharacterized protein"	0.334	0.230	0.602	3.5e-20
UNIPROTKB|A6H7J4	313	NEK6 "NEK6 protein" [Bos tauru	0.334	0.230	0.602	3.5e-20
UNIPROTKB|Q9HC98	313	NEK6 "Serine/threonine-protein	0.334	0.230	0.602	3.5e-20
UNIPROTKB|A2BD05	313	NEK6 "Serine/threonine-protein	0.334	0.230	0.602	3.5e-20
MGI|MGI:1891638	313	Nek6 "NIMA (never in mitosis g	0.334	0.230	0.602	3.5e-20
RGD|727779	313	Nek6 "NIMA-related kinase 6" [	0.334	0.230	0.602	3.5e-20

MGI|MGI:1890645 Nek7 "NIMA (never in mitosis gene a)-related expressed kinase 7" [Mus musculus (taxid:10090)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 46/80 (57%), Positives = 58/80 (72%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct:   195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query:   106 FPPLPSGVLYSDKTLHHPNI 125
             +PPLPS   YS++     NI
Sbjct:   255 YPPLPSDH-YSEELRQLVNI 273

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1311160 Nek7 "NIMA-related kinase 7" [Rattus norvegicus (taxid:10116)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 46/80 (57%), Positives = 58/80 (72%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct:   195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query:   106 FPPLPSGVLYSDKTLHHPNI 125
             +PPLPS   YS++     NI
Sbjct:   255 YPPLPSDH-YSEELRQLVNI 273

GO:0000922 "spindle pole" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R2U0 NEK7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct:   195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query:   106 FPPLPSGVLYSDK 118
             +PPLPS   YS++
Sbjct:   255 YPPLPSDH-YSEE 266

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q8TDX7 NEK7 "Serine/threonine-protein kinase Nek7" [Homo sapiens (taxid:9606)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct:   195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query:   106 FPPLPSGVLYSDK 118
             +PPLPS   YS++
Sbjct:   255 YPPLPSDH-YSEE 266

GO:0005524 "ATP binding" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0000910 "cytokinesis" evidence=TAS

GO:0007346 "regulation of mitotic cell cycle" evidence=TAS

GO:0051225 "spindle assembly" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

UNIPROTKB|J9NX17 NEK6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|A6H7J4 NEK6 "NEK6 protein" [Bos taurus (taxid:9913)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0031572 "G2 DNA damage checkpoint" evidence=IEA

GO:0030071 "regulation of mitotic metaphase/anaphase transition" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q9HC98 NEK6 "Serine/threonine-protein kinase Nek6" [Homo sapiens (taxid:9606)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0005874 "microtubule" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0004871 "signal transducer activity" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IDA

GO:0030071 "regulation of mitotic metaphase/anaphase transition" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0019894 "kinesin binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0051225 "spindle assembly" evidence=TAS

GO:0007346 "regulation of mitotic cell cycle" evidence=TAS

GO:0000910 "cytokinesis" evidence=TAS

GO:2000772 "regulation of cellular senescence" evidence=TAS

GO:0031572 "G2 DNA damage checkpoint" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007165 "signal transduction" evidence=IMP

UNIPROTKB|A2BD05 NEK6 "Serine/threonine-protein kinase Nek6" [Sus scrofa (taxid:9823)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0031572 "G2 DNA damage checkpoint" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0019901 "protein kinase binding" evidence=ISS

GO:0016607 "nuclear speck" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000922 "spindle pole" evidence=IEA

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0030071 "regulation of mitotic metaphase/anaphase transition" evidence=IEA

GO:0019894 "kinesin binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1891638 Nek6 "NIMA (never in mitosis gene a)-related expressed kinase 6" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007059 "chromosome segregation" evidence=ISO

GO:0007067 "mitosis" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO

GO:0019894 "kinesin binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030071 "regulation of mitotic metaphase/anaphase transition" evidence=ISO

GO:0031572 "G2 DNA damage checkpoint" evidence=ISO

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

RGD|727779 Nek6 "NIMA-related kinase 6" [Rattus norvegicus (taxid:10116)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query:    46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct:   206 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 265

Query:   106 FPPLPSGVLYSDK 118
             +PPLP G  YS+K
Sbjct:   266 YPPLP-GEHYSEK 277

GO:0000287 "magnesium ion binding" evidence=ISO;ISS

GO:0000922 "spindle pole" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0004871 "signal transducer activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=ISO;ISS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0006915 "apoptotic process" evidence=IEA

GO:0007059 "chromosome segregation" evidence=ISO;ISS

GO:0007067 "mitosis" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0016607 "nuclear speck" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA;ISO

GO:0019894 "kinesin binding" evidence=IEA;ISO

GO:0019901 "protein kinase binding" evidence=ISO;ISS

GO:0030071 "regulation of mitotic metaphase/anaphase transition" evidence=ISO;ISS

GO:0031572 "G2 DNA damage checkpoint" evidence=ISO;ISS

GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=ISO;ISS

GO:0051301 "cell division" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	215
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-28
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-26
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-25
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-25
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-21
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-17
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-16
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-15
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-15
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-14
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-14
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-13
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-13
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-12
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-12
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-12
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-12
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	6e-12
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-11
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-11
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-11
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-11
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	6e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	7e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-10
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-10
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-10
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-10
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	5e-10
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	7e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	7e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	8e-10
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	9e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-09
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-09
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-09
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-09
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	5e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	5e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-09
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	7e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	9e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-08
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-08
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-08
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-08
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-08
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-08
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	5e-08
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-08
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	7e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	9e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-07
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-07
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-07
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-07
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-07
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-07
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-07
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-07
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-07
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	5e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-07
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-07
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	6e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-07
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	8e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	9e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-06
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-06
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-06
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-06
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	2e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-06
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-06
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-06
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	5e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-06
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-06
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	6e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	7e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-06
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	9e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	9e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-05
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-05
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-05
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-05
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	2e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-05
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-05
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-05
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	3e-05
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-05
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	5e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	6e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	6e-05
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	7e-05
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	7e-05
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	8e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	8e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	9e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	9e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	9e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-04
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	4e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	4e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	5e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-04
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	5e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	6e-04
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	6e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	7e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	7e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	7e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	7e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	8e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	8e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	8e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	9e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	9e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.001
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.001
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	0.001
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.001
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.001
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	0.001
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	0.001
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.001
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	0.001
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.001
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.001
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.001
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.001
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.001
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.001
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.001
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.001
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.001
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.002
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.002
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.002
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.002
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.002
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.002
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.002
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.002
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.002
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.002
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	0.002
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.002
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.002
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.002
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	0.002
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.002
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.003
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.003
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	0.003
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	0.003
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.003
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.003
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.003
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.003
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.003
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.003
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.003
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.003
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.003
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.003
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.004
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.004
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.004
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.004
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.004
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.004
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.004
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.004
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	0.004
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	0.004
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.004
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.004
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.004
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	0.004
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.004
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	0.004

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  106 bits (267), Expect = 3e-28
 Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD 224

Query: 106 FPPLPSGVLYSDK 118
           +PPLP+   YS++
Sbjct: 225 YPPLPADH-YSEE 236

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score =  100 bits (251), Expect = 6e-26
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 224

Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 225 YPPLPS 230

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 99.3 bits (247), Expect = 2e-25
 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 1/73 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LC++IE   
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 224

Query: 106 FPPLPSGVLYSDK 118
           +PPLP    YS+K
Sbjct: 225 YPPLP-TEHYSEK 236

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 97.6 bits (244), Expect = 8e-25
 Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GTPYY+SPE  +   Y++ SD+WSLGCVLYE+  L+ PF  +  +L  L  +I    
Sbjct: 162 TVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF--EGENLLELALKILKGQ 219

Query: 106 FPPLPSGVLYSDK 118
           +PP+PS   YS +
Sbjct: 220 YPPIPSQ--YSSE 230

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 6/73 (8%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK-HISLNGLCKRIEMA 104
           +++GTPYYMSPE+L  + Y   SD+WSLGC++YE+ AL  PF ++  + L     +I+  
Sbjct: 169 TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS---KIKEG 225

Query: 105 LFPPLPSGVLYSD 117
            F  +P    YS 
Sbjct: 226 KFRRIPYR--YSS 236

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 87.9 bits (219), Expect = 3e-21
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNI++   +F      +L +V+E AD GDL+  I + +++     E  +  +F Q
Sbjct: 54  KKLNHPNIIKYYESFEE--KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ 111

Query: 178 IAAALQYVHSRRILHR 193
           +  AL+Y+HSR+ILHR
Sbjct: 112 LCLALKYLHSRKILHR 127

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 82.2 bits (204), Expect = 3e-19
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
            +F+GTP YM+PE L    Y    D+WSLG +LYE++  + PF      L  L K+I   
Sbjct: 154 TTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDD-QLLELFKKIGKP 212

Query: 105 LFPPLPSGVLYSD 117
             P  P     S 
Sbjct: 213 KPPFPPPEWDISP 225

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 78.3 bits (194), Expect = 1e-17
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNIV L   F      +L+LV+E  + GDL  ++    +K+  L+E     Y RQ
Sbjct: 52  KKLKHPNIVRLYDVF--EDEDKLYLVMEYCEGGDLFDLL----KKRGRLSEDEARFYLRQ 105

Query: 178 IAAALQYVHSRRILHR 193
           I +AL+Y+HS+ I+HR
Sbjct: 106 ILSALEYLHSKGIVHR 121

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 75.9 bits (187), Expect = 1e-16
 Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPN+++  ++F   +  EL +VLELAD GDL+ +I   +++K  + E  +W YF Q
Sbjct: 57  KQLDHPNVIKYLASFIENN--ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQ 114

Query: 178 IAAALQYVHSRRILHR 193
           + +AL+++HS+RI+HR
Sbjct: 115 LCSALEHMHSKRIMHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 75.6 bits (186), Expect = 1e-16
 Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 4/70 (5%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GTP+YM+PE  K   YS+ SD+WSLGC+LYEM     PF ++  S+  L  +++   +P
Sbjct: 162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR--SMQDLRYKVQRGKYP 219

Query: 108 PLPSGVLYSD 117
           P+P   +YS 
Sbjct: 220 PIPP--IYSQ 227

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 72.2 bits (178), Expect = 2e-15
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 16/80 (20%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF-------SKHISLNGL 97
           ++ +GTPY+M+PE +    Y + +D+WSLG    E+   + P+           I+ NG 
Sbjct: 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG- 213

Query: 98  CKRIEMALFPPLPSGVLYSD 117
                    P L +   +SD
Sbjct: 214 --------PPGLRNPEKWSD 225

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 71.8 bits (177), Expect = 3e-15
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 25/107 (23%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP-------E 57
              + +F+GTP YM+PE L    Y    D+WSLG +LYE+    G P +          +
Sbjct: 150 GEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYEL--LTGKPPFPGDDQLLELFK 207

Query: 58  RLKELKYSFPSDVWSLGCVLYEMV----------------ALQSPFF 88
           ++ + K  FP   W +     +++                ALQ PFF
Sbjct: 208 KIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 71.2 bits (174), Expect = 5e-15
 Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPN+++  ++F   +  EL +VLELAD GDL+ +I   +++K  + E  VW YF Q
Sbjct: 57  KQLNHPNVIKYYASFIEDN--ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQ 114

Query: 178 IAAALQYVHSRRILHR 193
           + +AL+++HSRR++HR
Sbjct: 115 LCSALEHMHSRRVMHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPN+++   +F   +  EL +VLELAD GDL+ +I   +++K  + E  VW YF Q
Sbjct: 57  KQLNHPNVIKYLDSFIEDN--ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQ 114

Query: 178 IAAALQYVHSRRILHR 193
           + +A++++HSRR++HR
Sbjct: 115 LCSAVEHMHSRRVMHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV L  AF       L+LV+E  + GDL   ++    +   L+E        Q
Sbjct: 53  RRLSHPNIVRLIDAF--EDKDHLYLVMEYCEGGDLFDYLS----RGGPLSEDEAKKIALQ 106

Query: 178 IAAALQYVHSRRILHR 193
           I   L+Y+HS  I+HR
Sbjct: 107 ILRGLEYLHSNGIIHR 122

Length = 260

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 69.6 bits (170), Expect = 2e-14
 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 10/94 (10%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GTPYYMSPE      Y++ SDVW+LGC +YEM  L+  F +K   +N L  RI    
Sbjct: 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK--DMNSLVYRIIEGK 218

Query: 106 FPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQE 139
            PP+P          + P + EL +   S+  ++
Sbjct: 219 LPPMPKD--------YSPELGELIATMLSKRPEK 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 68.4 bits (168), Expect = 3e-14
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L   F       L+LV+E  + G L  ++   ++ +  L+E  +     Q
Sbjct: 46  KKLNHPNIVKLYGVF--EDENHLYLVMEYCEGGSLKDLL---KENEGKLSEDEILRILLQ 100

Query: 178 IAAALQYVHSRRILHR 193
           I   L+Y+HS  I+HR
Sbjct: 101 ILEGLEYLHSNGIIHR 116

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 68.8 bits (169), Expect = 4e-14
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 5/81 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        RS Q L++V+E  + GDLA +I +C++++ ++ E  +W    Q
Sbjct: 54  RELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQ 113

Query: 178 IAAALQYVHSR-----RILHR 193
           +  AL   H+R      +LHR
Sbjct: 114 LLLALYECHNRSDPGNTVLHR 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)

Query: 45  DSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
            +F+GTP+YM+PE L     Y    DVWSLG +LYE++  + PF  ++I L+ L + I  
Sbjct: 156 TTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENI-LDQL-QLIRR 213

Query: 104 ALFPPLPSGVLYSD 117
            L PPL        
Sbjct: 214 ILGPPLEFDEPKWS 227

Length = 260

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 67.1 bits (164), Expect = 1e-13
 Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           ++ +GTPYYMSPE  + +KY+F SD+W+LGCVLYE++ L+  F + +     L  +I   
Sbjct: 159 ETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--NLVVKIVQG 216

Query: 105 LFPPLPSG 112
            + P+ S 
Sbjct: 217 NYTPVVSV 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 65.5 bits (160), Expect = 5e-13
 Identities = 23/44 (52%), Positives = 34/44 (77%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +  + S  ++ +GTPYYMSPE  + +KY+F SD+W+LGCVLYE+
Sbjct: 151 LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYEL 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 64.9 bits (159), Expect = 8e-13
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
            T + ++ +GTPY+M+PE +    Y + +D+WSLG    E+    G P Y     +K L 
Sbjct: 150 DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL--AEGKPPYSELPPMKALF 207

Query: 64  Y 64
            
Sbjct: 208 K 208

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GT  Y  PE +K   Y   +DVW+ GC+LY+M  LQ PF+S ++    L  +I  A+
Sbjct: 172 SVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--SLATKIVEAV 229

Query: 106 FPPLPSGVLYSDK 118
           + PLP G+ YS+ 
Sbjct: 230 YEPLPEGM-YSED 241

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 64.8 bits (158), Expect = 1e-12
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GTPYY+SPE  ++  Y+  SDVW+LG VLYE    + PF +   +   L  +I   +
Sbjct: 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN--NQGALILKIIRGV 217

Query: 106 FPPLPSG 112
           FPP+   
Sbjct: 218 FPPVSQM 224

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 20/42 (47%), Positives = 29/42 (69%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           SF+GT  Y+SPE L E      SD+W+LGC++Y+M+  + PF
Sbjct: 181 SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HPNI+  + AF    G +L +V+E A  GDL+  I++ ++K+  + E  +W  F Q+   
Sbjct: 58  HPNIISYKEAFLD--GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG 115

Query: 182 LQYVHSRRILHR 193
           LQ +H ++ILHR
Sbjct: 116 LQALHEQKILHR 127

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 20/46 (43%), Positives = 30/46 (65%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           ++F GTP Y++PE L    Y    D WSLG +LYEM+  + PF+++
Sbjct: 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 16/76 (21%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--------HISLNGL 97
           S  GTPY+M+PE ++  +Y   +D+WSLGC + EM   + P+            I  +G 
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE 221

Query: 98  CKRIEMALFPPLPSGV 113
                    P +P  +
Sbjct: 222 P--------PEIPEHL 229

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 63.3 bits (154), Expect = 3e-12
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GTPYY+SPE  +   Y+  SD+W+LGCVLYEM  L+  F +   ++  L  +I    +P
Sbjct: 162 IGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG--NMKNLVLKIIRGSYP 219

Query: 108 PLPSGVLYSDKTL 120
           P+ S   Y  + L
Sbjct: 220 PVSSHYSYDLRNL 232

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 62.6 bits (152), Expect = 6e-12
 Identities = 26/42 (61%), Positives = 29/42 (69%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTPYYMSPE LK   Y   SD+WSLGC+LYEM  L   F
Sbjct: 164 TFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAF 205

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 61.9 bits (150), Expect = 1e-11
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GTPYY+SPE  +   Y+  +D+WSLGCVLYE+  L+ PF     +L+ L  +I    F 
Sbjct: 163 VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN--NLHQLVLKICQGYFA 220

Query: 108 PLPSGVLYSDKTL 120
           P+        ++L
Sbjct: 221 PISPNFSRDLRSL 233

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 61.5 bits (149), Expect = 1e-11
 Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +++GTPYY+ PE  + + Y+  SD+WSLGC+LYE+  L+ PF +   S   L  ++    
Sbjct: 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN--SWKNLILKVCQGS 216

Query: 106 FPPLPSGVLYSDKTL 120
           + PLPS   Y  ++L
Sbjct: 217 YKPLPSHYSYELRSL 231

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 8/66 (12%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP------YYMSPERLKELK 63
           SF+GT  Y+SPE L E      SD+W+LGC++Y++    G P       Y++ +++ +L+
Sbjct: 181 SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQM--LTGKPPFRGSNEYLTFQKILKLE 238

Query: 64  YSFPSD 69
           YSFP +
Sbjct: 239 YSFPPN 244

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 61.3 bits (150), Expect = 2e-11
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNIV+L     +     L+LV E  D  DL   + +       L+  L+ S   Q
Sbjct: 53  KELKHPNIVKLLDVIHTERK--LYLVFEYCDM-DLKKYLDKRPGP---LSPNLIKSIMYQ 106

Query: 178 IAAALQYVHSRRILHR 193
           +   L Y HS RILHR
Sbjct: 107 LLRGLAYCHSHRILHR 122

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 36  SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS-KHISL 94
            L   L + ++F+GT  YMSPER++   YS+ +D+WSLG  L E    + PF      S 
Sbjct: 149 VLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208

Query: 95  NGLCKRIEMALFPPLPSGVLYSDKT 119
             L + I     P LP+   +S + 
Sbjct: 209 FELMQAICDGPPPSLPAE-EFSPEF 232

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG---LCKRI 101
            +F+GT  YM+PER++   YS  SD+WSLG  L E+   + P+  ++   +G   L + I
Sbjct: 157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI 216

Query: 102 EMALFPPLPSGVLYSD 117
                P LPSG    D
Sbjct: 217 VNEPPPRLPSGKFSPD 232

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 60.2 bits (146), Expect = 4e-11
 Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKY 64
           +GTP+YM+PE  K   YS+ SD+WSLGC+LYE+ +F   P       +++L+Y
Sbjct: 162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATF-APP--FEARSMQDLRY 211

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 46  SFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQS 85
           + +GTP YM+PE L     YS  SD+WSLG +LYE+  L+ 
Sbjct: 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYELPELKD 192

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 60.0 bits (146), Expect = 5e-11
 Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)

Query: 6   SSVDSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL-- 62
           SS+ +F+GTP+YM+PE L     Y    DVWSLG +LYE+    G P +     L +L  
Sbjct: 153 SSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYEL--LTGKPPFSGENILDQLQL 210

Query: 63  -------KYSFPSDVWSLG 74
                     F    WS G
Sbjct: 211 IRRILGPPLEFDEPKWSSG 229

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.6 bits (145), Expect = 5e-11
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEVDSF 47
           ++   S + + +GTP YM+PE L     YS  SD+WSLG +LYE+   
Sbjct: 143 LTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYELPEL 190

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 60.2 bits (146), Expect = 5e-11
 Identities = 22/39 (56%), Positives = 28/39 (71%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP YM+PE L+   Y F  D ++LGC LYEM+A +SPF
Sbjct: 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 60.8 bits (147), Expect = 5e-11
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           SF GTPYY++PE  +  +YS  +D+WSLG +LYE++ L  PF  K  S   + +++    
Sbjct: 230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPF--KGPSQREIMQQVLYGK 287

Query: 106 FPPLPSGVLYSDKTLHHP 123
           + P P  V    K L  P
Sbjct: 288 YDPFPCPVSSGMKALLDP 305

Length = 478

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 60.2 bits (146), Expect = 6e-11
 Identities = 23/43 (53%), Positives = 29/43 (67%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            +F GTP Y++PE LK  KY+   D WS G +LYEM+  QSPF
Sbjct: 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK---HISLNGLCKRIE 102
            +GTP Y++PE +    +S   D WSLGC+LYE +    PF  +    I  N L  +IE
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 59.5 bits (145), Expect = 9e-11
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++F+GT  YMSPER++   YS+ +D+WSLG  L E
Sbjct: 158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLE 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.7 bits (143), Expect = 1e-10
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           S  GTPY+M+PE ++  +Y   +D+WSLGC + E
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIE 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 58.2 bits (141), Expect = 3e-10
 Identities = 22/41 (53%), Positives = 27/41 (65%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE L    Y    D W+LG +LYEM+A QSPF
Sbjct: 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPF 196

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 57.5 bits (140), Expect = 4e-10
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 26/111 (23%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYMSP--- 56
           +S + S  ++F GTP Y++PE L    Y    D WSLG +LYE+    G  P+Y      
Sbjct: 143 LSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEM--LTGKPPFYAEDRKE 200

Query: 57  --ERLKELKYSFPSDVWS-----------------LGCVLYEMVALQSPFF 88
             E++ +    FP  +                   LG    E +    PFF
Sbjct: 201 IYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIK-AHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 57.3 bits (138), Expect = 4e-10
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +F GTPYYMSPE LK   Y   SD+WSLGC+LYE+
Sbjct: 164 TFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 4e-10
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
           +S +GTP Y++PE L+   Y    D WSLG +LYEM+    PF+S   +L     +I
Sbjct: 188 NSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD--TLQETYNKI 242

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+   + F       L + +E A+ G L   I   RQK     E +V  Y  QI 
Sbjct: 56  LQHPNIIAYYNHFMDD--NTLLIEMEYANGGTLYDKIV--RQKGQLFEEEMVLWYLFQIV 111

Query: 180 AALQYVHSRRILHR 193
           +A+ Y+H   ILHR
Sbjct: 112 SAVSYIHKAGILHR 125

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYM-SPERL----KELKY 64
            +GTP Y++PE +    +S   D WSLGC+LYE    +G  P++  +PE +       K 
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEF--LVGIPPFHGETPEEIFQNILNGKI 218

Query: 65  SFPSDV 70
            +P DV
Sbjct: 219 EWPEDV 224

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 57.5 bits (139), Expect = 5e-10
 Identities = 22/42 (52%), Positives = 31/42 (73%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+EL+Y    D W+LG ++YEM+A Q PF
Sbjct: 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV+L         + L +V+E    GDL   + + R K+  L++ L ++   Q
Sbjct: 56  RKLDHPNIVKLLGV--CTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFAL--Q 111

Query: 178 IAAALQYVHSRRILHR 193
           IA  ++Y+ S+  +HR
Sbjct: 112 IARGMEYLESKNFIHR 127

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 56.7 bits (137), Expect = 7e-10
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV     F       L++V++L +   L       ++KK    E  +W+ F Q
Sbjct: 64  EQLRHPNIVRYYKTFLE--NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 178 IAAALQYVH-SRRILHR 193
           +  AL+Y+H  +RI+HR
Sbjct: 122 MVLALRYLHKEKRIVHR 138

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 57.1 bits (138), Expect = 7e-10
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GT +YM+PER++   YS  SDVWSLG  L E+   + PF
Sbjct: 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPF 203

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 56.9 bits (137), Expect = 8e-10
 Identities = 24/42 (57%), Positives = 31/42 (73%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+ LKY+F  D WS G +LYEM+  QSPF
Sbjct: 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV L+    S+    +++V E  D  DL  ++      +    E  +  Y +Q
Sbjct: 53  QKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLL---DSPEVKFTESQIKCYMKQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   LQY+HS  ILHR
Sbjct: 109 LLEGLQYLHSNGILHR 124

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           S   +F+GT  YM+PER++   YS  SD+WSLG  L E+
Sbjct: 154 SLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIEL 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HPNIV+   ++    G EL++V+E  D G L  +I +   +   + E  +    R+
Sbjct: 70  KDCKHPNIVDYYDSY--LVGDELWVVMEYMDGGSLTDIITQNFVR---MNEPQIAYVCRE 124

Query: 178 IAAALQYVHSRRILHR 193
           +   L+Y+HS+ ++HR
Sbjct: 125 VLQGLEYLHSQNVIHR 140

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 20/40 (50%), Positives = 29/40 (72%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +GT  YM+PE +K  +Y+F  D W LGC++YEM+  +SPF
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 23/40 (57%), Positives = 31/40 (77%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +GT  YM+PE +K  +Y+F  D W+LGC+LYEM+A QSPF
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            +S +G+P YM+PE L+   Y F  D WSLGC+LYE +    PF
Sbjct: 155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPF 198

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            +L HPNIV    +        L + LE    G L+ ++    +K   L E ++  Y RQ
Sbjct: 54  SSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL----KKFGKLPEPVIRKYTRQ 109

Query: 178 IAAALQYVHSRRILHR 193
           I   L Y+HS  I+HR
Sbjct: 110 ILEGLAYLHSNGIVHR 125

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F  +S   + LV E  +  DL  VI   + K   L    + SY     
Sbjct: 59  LKHPNIIGLLDVFGHKS--NINLVFEFME-TDLEKVI---KDKSIVLTPADIKSYMLMTL 112

Query: 180 AALQYVHSRRILHR 193
             L+Y+HS  ILHR
Sbjct: 113 RGLEYLHSNWILHR 126

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 54.8 bits (133), Expect = 3e-09
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+PE LK+ K++  SDVWS G +L+E+ +    PY  MS E + EL
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEL 216

Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 54.8 bits (132), Expect = 4e-09
 Identities = 21/43 (48%), Positives = 31/43 (72%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +S  T+  ++ +GTPYY+SPE  ++  Y+  SDVW+LG VLYE
Sbjct: 151 LSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYE 193

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 54.8 bits (133), Expect = 4e-09
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKE 61
           +M+PE LK+  ++  SDVWS G +L+E+ +   TPY  +S E + E
Sbjct: 173 WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE 218

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 55.0 bits (132), Expect = 4e-09
 Identities = 22/39 (56%), Positives = 30/39 (76%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GT  YM+PE LKE  YS+P D +++GC +YEMVA ++PF
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 54.2 bits (130), Expect = 5e-09
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNIV  R ++    G  L++V+   + GDL   + E  QK   L E  V  +F QIA
Sbjct: 56  LKHPNIVAYRESWEGEDGL-LYIVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIA 112

Query: 180 AALQYVHSRRILHR 193
            ALQY+H + ILHR
Sbjct: 113 MALQYLHEKHILHR 126

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 54.5 bits (132), Expect = 5e-09
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HP I++L   F       L+ VLE A  G+L   I   R+      +C  + Y  +I  
Sbjct: 60  GHPGIIKLYYTFQDEE--NLYFVLEYAPNGELLQYI---RKYGSLDEKCTRF-YAAEILL 113

Query: 181 ALQYVHSRRILHR 193
           AL+Y+HS+ I+HR
Sbjct: 114 ALEYLHSKGIIHR 126

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 21/40 (52%), Positives = 26/40 (65%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
            S   +F GT +YM+PER++   YS  SDVWSLG  L EV
Sbjct: 157 NSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 54.7 bits (131), Expect = 5e-09
 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 14/123 (11%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA--IGR-YPIPPPDAKELEAI 213

Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V          ++ +     + +S +G+  R  MA+F           P LP+GV 
Sbjct: 214 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 273

Query: 115 YSD 117
             D
Sbjct: 274 TPD 276

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 54.1 bits (131), Expect = 6e-09
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           +M+PE LKE K++  SDVWS G +L+E+ +    PY  MS   + E 
Sbjct: 170 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEY 216

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
             HP +V+L   F    G    LV+E     DL+ V+ +  +    L E  V SY R + 
Sbjct: 56  CQHPYVVKLLDVF--PHGSGFVLVMEYM-PSDLSEVLRDEERP---LPEAQVKSYMRMLL 109

Query: 180 AALQYVHSRRILHR 193
             + Y+H+  I+HR
Sbjct: 110 KGVAYMHANGIMHR 123

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)

Query: 46  SFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPF 87
           SF G+PY+M+PE + +   Y   +D+WSLGC + EM   + P+
Sbjct: 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW 202

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 54.1 bits (131), Expect = 6e-09
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHL--AECLVWSYF 175
           + L HPN+V+L         + L++V+E  + GDL   +   R+ +  L  ++ L ++  
Sbjct: 56  RKLDHPNVVKLLGV--CTEEEPLYIVMEYMEGGDLLSYL---RKNRPKLSLSDLLSFAL- 109

Query: 176 RQIAAALQYVHSRRILHR 193
            QIA  ++Y+ S+  +HR
Sbjct: 110 -QIARGMEYLESKNFIHR 126

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 53.8 bits (129), Expect = 7e-09
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           + HPNIV   ++F  +    LF+V+E  D GDL   I   RQ+    +E  + S+F QI+
Sbjct: 56  MKHPNIVTFFASF--QENGRLFIVMEYCDGGDLMKRIN--RQRGVLFSEDQILSWFVQIS 111

Query: 180 AALQYVHSRRILHRG--ERETFLS 201
             L+++H R+ILHR    +  FLS
Sbjct: 112 LGLKHIHDRKILHRDIKSQNIFLS 135

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 53.7 bits (130), Expect = 7e-09
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           +M+PE LKE K++  SDVWS G +L+E+ +    PY  MS E + E 
Sbjct: 169 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEY 215

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.4 bits (129), Expect = 7e-09
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 40  VLYEVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPF--FSKHISL 94
           +     + +GTP YM+PE L  L     S  SD+WSLG  LYE++    PF       + 
Sbjct: 161 IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSAT 220

Query: 95  NGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL 128
           +   K I     P L S +  S+  L      +L
Sbjct: 221 SQTLKIILELPTPSLASPLSPSNPELISKAASDL 254

Length = 384

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 7e-09
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNIV+   +    +   L+++LE A+ G L  +I    +K     E LV  Y  Q
Sbjct: 54  KNLKHPNIVKYIGSI--ETSDSLYIILEYAENGSLRQII----KKFGPFPESLVAVYVYQ 107

Query: 178 IAAALQYVHSRRILHR 193
           +   L Y+H + ++HR
Sbjct: 108 VLQGLAYLHEQGVIHR 123

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.0 bits (130), Expect = 8e-09
 Identities = 22/43 (51%), Positives = 30/43 (69%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           D+F+GT  YMSPER++  KY+  SDVWSLG  + E+   + PF
Sbjct: 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 53.8 bits (129), Expect = 9e-09
 Identities = 21/40 (52%), Positives = 28/40 (70%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +GT  YM+PE +   KY+F  D W LGC++YEM+  QSPF
Sbjct: 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           + HPNIV+ + +F       L++V++  + GDL   I    Q+     E  +  +F QI 
Sbjct: 56  MKHPNIVQYQESFEENG--NLYIVMDYCEGGDLYKKINA--QRGVLFPEDQILDWFVQIC 111

Query: 180 AALQYVHSRRILHR 193
            AL++VH R+ILHR
Sbjct: 112 LALKHVHDRKILHR 125

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 53.5 bits (128), Expect = 1e-08
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
           + S  GTPY+MSPE +    Y   +DVWSLGC + EM+  + P ++++ ++  + K    
Sbjct: 166 IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEYEAMAAIFKIATQ 224

Query: 104 ALFPPLPS 111
              P LPS
Sbjct: 225 PTNPQLPS 232

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           S +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH 202

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEM 80
           +SF+GT  YMSPERL+   Y+  SD+WSLG  L EM
Sbjct: 156 NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM 191

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 53.4 bits (128), Expect = 1e-08
 Identities = 20/40 (50%), Positives = 27/40 (67%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +GT  YM+PE L   +Y+   D W LGC++YEM+  QSPF
Sbjct: 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 20/44 (45%), Positives = 28/44 (63%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           S  GTPY+M+PE + E  Y   SD+WS+GC ++EM   + P  S
Sbjct: 167 SMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 19/33 (57%), Positives = 26/33 (78%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +GTPYY+SPE  +   Y+  SD+W+LGCVLYE+
Sbjct: 162 IGTPYYLSPEICENRPYNNKSDIWALGCVLYEM 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGT-PYYMSPE 57
           S  D+F+GT  YMSPER++  KY+  SDVWSLG  + E+   LG  P+  S  
Sbjct: 157 SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIEL--ALGKFPFAFSNI 207

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 24/119 (20%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   Y+  SD+WSLG  L E+   +G  Y + P   KEL+  
Sbjct: 153 SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM--AIGR-YPIPPPDAKELEAM 209

Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGV 113
           F             +   ++    + +S +       MA+F           P LPSG 
Sbjct: 210 FG----------RPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGA 258

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 17/47 (36%), Positives = 31/47 (65%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++ +GTP++M+PE ++E+ Y+  +D+WSLG    EM   + P+   H
Sbjct: 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIH 203

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 9/60 (15%)

Query: 41  LYEVDSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
           L   DSF+GTPY+M+PE      +K+  Y + +D+WSLG  L EM  ++ P    H  LN
Sbjct: 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHELN 219

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.8 bits (125), Expect = 3e-08
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
           H PNIV+L   F  +    L+LV+E  D G L  ++ +  +K   L+E        QI +
Sbjct: 56  HPPNIVKLYDFF--QDEGSLYLVMEYVDGGSLEDLLKKIGRKGP-LSESEALFILAQILS 112

Query: 181 ALQYVHSRRILHR 193
           AL+Y+HS+ I+HR
Sbjct: 113 ALEYLHSKGIIHR 125

Length = 384

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 46  SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           SF+GTPY+M+PE     +   Y    D+W+LG    E+  LQ P F  H
Sbjct: 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNI++L   F  R   +L+LV E  D  DL  +I   + ++  L E L+ SY  Q
Sbjct: 53  KELNHPNIIKLLDVF--RHKGDLYLVFEFMDT-DLYKLI---KDRQRGLPESLIKSYLYQ 106

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS  ILHR
Sbjct: 107 LLQGLAFCHSHGILHR 122

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 9/56 (16%)

Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L EM  ++ P    H  LN
Sbjct: 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP----HHELN 212

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 51.8 bits (124), Expect = 3e-08
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GTP Y+SPE  +   Y+  SD+W+LGCVLYE+ +L+  F +   +L  L  +I    F 
Sbjct: 162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA--NLPALVLKIMSGTFA 219

Query: 108 PL 109
           P+
Sbjct: 220 PI 221

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 19/38 (50%), Positives = 26/38 (68%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +  +S +G+P YM+PE L+   Y F  D WSLGC+LYE
Sbjct: 153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH-------LAECL 170
           K L HPN+V L         + L+LVLE  + GDL   + + R            L + L
Sbjct: 51  KKLGHPNVVRLLGV--CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLL 108

Query: 171 VWSYFRQIAAALQYVHSRRILHR 193
            ++   QIA  ++Y+ S++ +HR
Sbjct: 109 SFAI--QIAKGMEYLASKKFVHR 129

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 51.8 bits (124), Expect = 4e-08
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 8/78 (10%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH--LAECLVWSYF 175
           K L HPNI+E    F     + L +V+E A  G LA  I    QK+C+  L E  +  +F
Sbjct: 54  KLLSHPNIIEYYENFLE--DKALMIVMEYAPGGTLAEYI----QKRCNSLLDEDTILHFF 107

Query: 176 RQIAAALQYVHSRRILHR 193
            QI  AL +VH++ ILHR
Sbjct: 108 VQILLALHHVHTKLILHR 125

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 13/95 (13%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER--L 59
           SV      SF GTPYY++PE  +  +YS  +D+WSLG +LYE+ + L  P+    +R  +
Sbjct: 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT-LHRPFKGPSQREIM 280

Query: 60  KELKYS----FPSDVWSLGCVLYEMVALQSPFFSK 90
           +++ Y     FP  V S       M AL  P  SK
Sbjct: 281 QQVLYGKYDPFPCPVSS------GMKALLDPLLSK 309

Length = 478

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNIV+       R    L++ LEL   G LA ++    +K     E ++  Y RQI 
Sbjct: 59  LQHPNIVQYLGT--EREEDNLYIFLELVPGGSLAKLL----KKYGSFPEPVIRLYTRQIL 112

Query: 180 AALQYVHSRRILHR 193
             L+Y+H R  +HR
Sbjct: 113 LGLEYLHDRNTVHR 126

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.7 bits (124), Expect = 5e-08
 Identities = 20/42 (47%), Positives = 30/42 (71%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 52.0 bits (124), Expect = 6e-08
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 15/72 (20%)

Query: 46  SFLGTPYYMSPERL-KELK-YSFPSDVWSLGCVLYEMVALQSPF-----FSKHISLNGLC 98
           S +GTPYY SPE L  E K Y   SD+W+LGC++YE+ + ++PF     FS+ IS     
Sbjct: 200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS----- 254

Query: 99  KRIEMALFPPLP 110
              E+   P LP
Sbjct: 255 ---ELKRGPDLP 263

Length = 1021

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 51.1 bits (122), Expect = 7e-08
 Identities = 18/35 (51%), Positives = 28/35 (80%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +++GTPYY+ PE  + + Y+  SD+WSLGC+LYE+
Sbjct: 159 TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNIVEL+     +    +FLV+E  +Q DLA ++          +E  V     Q+ 
Sbjct: 63  LRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLL---DNMPTPFSESQVKCLMLQLL 118

Query: 180 AALQYVHSRRILHR 193
             LQY+H   I+HR
Sbjct: 119 RGLQYLHENFIIHR 132

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.0 bits (122), Expect = 8e-08
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           S  GTPY+MSPE +    Y   +DVWS+GC + EM+  + P+
Sbjct: 166 SVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 15/35 (42%), Positives = 25/35 (71%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E
Sbjct: 156 NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE 190

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.8 bits (122), Expect = 9e-08
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L+HP +V L  +F     + ++LV++L   GDL   +     +K   +E  V  +  +I 
Sbjct: 57  LNHPFLVNLWYSFQDE--ENMYLVVDLLLGGDLRYHL----SQKVKFSEEQVKFWICEIV 110

Query: 180 AALQYVHSRRILHR 193
            AL+Y+HS+ I+HR
Sbjct: 111 LALEYLHSKGIIHR 124

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 51.1 bits (122), Expect = 9e-08
 Identities = 22/48 (45%), Positives = 31/48 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           +F GTP Y++PE L++  Y    D W LG VLYEM+    PF+S+ +S
Sbjct: 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS 202

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             ++HP IV+L  AF +    +L+LVLE A  G+L   +    ++     E   + Y  +
Sbjct: 48  SRINHPFIVKLHYAFQTEE--KLYLVLEYAPGGELFSHL---SKEGRFSEERARF-YAAE 101

Query: 178 IAAALQYVHSRRILHR 193
           I  AL+Y+HS  I++R
Sbjct: 102 IVLALEYLHSLGIIYR 117

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 19/33 (57%), Positives = 26/33 (78%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +GTPYY+SPE  +   Y+  +D+WSLGCVLYE+
Sbjct: 163 VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
           +M+PE LK+  ++  SDVWS G +L+E+  L  +P+    +S   + + +      P P 
Sbjct: 173 WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG--LSNEEVLEYLRKGYRLPKPE 230

Query: 112 GV 113
             
Sbjct: 231 YC 232

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 16/76 (21%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
            S +GTPY+M+PE ++    S  SD+WSLGC + E++    P++     LN +      A
Sbjct: 157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYY----DLNPM-----AA 207

Query: 105 LF-------PPLPSGV 113
           LF       PPLP G+
Sbjct: 208 LFRIVQDDHPPLPEGI 223

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 50.7 bits (121), Expect = 1e-07
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
            ++ + S  GTPY+M+PE + E  Y   SD+WS+GC ++E+ +  G P   S +RL  + 
Sbjct: 161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT--GKPPLASMDRLAAMF 218

Query: 64  Y 64
           Y
Sbjct: 219 Y 219

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 51.0 bits (122), Expect = 1e-07
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F GTPYY++PE  +   YS  +D++SLG +LYE++ L+ PF     ++  +  +     
Sbjct: 204 TFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF--DGENMEEVMHKTLAGR 261

Query: 106 FPPLPSGV 113
           + PLP  +
Sbjct: 262 YDPLPPSI 269

Length = 496

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
           GTP Y++PE +    Y    D W+LG ++YEM+A   PFF    +   + ++I
Sbjct: 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD--NPIQIYEKI 210

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 50.4 bits (120), Expect = 1e-07
 Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 16/120 (13%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA--IGR-YPIPPPDAKELELM 213

Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V             + P   + +S  G   R  MA+F           P LPSGV 
Sbjct: 214 FGCPVEGDPAESETSPRPRPP--GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVF 271

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE +    Y F  D WSLG +LYE++  + PF
Sbjct: 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPF 192

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 20/42 (47%), Positives = 31/42 (73%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+  +Y F  D W+LG +++EM+A +SPF
Sbjct: 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
           + S  GTPY+MSPE +    Y   +DVWS+ C + EM+  + P ++++ ++  + K    
Sbjct: 166 IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT-EKPPWAEYEAMAAIFKIATQ 224

Query: 104 ALFPPLPSGV 113
              P LP GV
Sbjct: 225 PTKPMLPDGV 234

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 22/42 (52%), Positives = 28/42 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L   KY+   D WS G +LYEM+  QSPF
Sbjct: 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           S +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 46  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +F+GTPY+M+PE + E K Y   +D+WSLG  +YEM A  +P +S  
Sbjct: 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEM-ATGNPPYSDV 205

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 19/44 (43%), Positives = 27/44 (61%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           S +GTP Y++PE   +  Y+   D WSLG ++YEM+    PF S
Sbjct: 198 STVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS 241

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 16/79 (20%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPY+M+PE +K   Y    D+WSLG +  EM   + P    ++    L      AL
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP----YLREPPL-----RAL 225

Query: 106 F-------PPLPSGVLYSD 117
           F       PPL +   +S 
Sbjct: 226 FLITTKGIPPLKNPEKWSP 244

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 50.1 bits (119), Expect = 3e-07
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 12/117 (10%)

Query: 84  QSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLV 143
           Q  F  K IS  GL +R +  L   +   V+   + L H NIV     F +++ Q+L+++
Sbjct: 38  QEFFCWKAISYRGLKEREKSQLV--IEVNVM---RELKHKNIVRYIDRFLNKANQKLYIL 92

Query: 144 LELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-------RRILHR 193
           +E  D GDL+  I +C +    + E  +    RQ+  AL Y H+        R+LHR
Sbjct: 93  MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149

Length = 1021

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 18/39 (46%), Positives = 22/39 (56%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP YM+PE L    YS   D WSLG   YE +  + P+
Sbjct: 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY 199

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 20/44 (45%), Positives = 29/44 (65%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           S +GTPY+M+PE +    Y    D+WSLG ++ EMV  + P+FS
Sbjct: 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFS 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 49.3 bits (117), Expect = 3e-07
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           S +GTPY+M+PE +  L Y    D+WSLG ++ EM+  + P+F++
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV L       S  +L+LV E  D  DL   +         L   L+ SY  Q
Sbjct: 53  KELNHPNIVRLLDVV--HSENKLYLVFEFLDL-DLKKYMDSS--PLTGLDPPLIKSYLYQ 107

Query: 178 IAAALQYVHSRRILHR 193
           +   + Y HS R+LHR
Sbjct: 108 LLQGIAYCHSHRVLHR 123

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 48.8 bits (116), Expect = 4e-07
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           + HPNIV  + +F +     L++V+E  D GDL   I   R K     E  +  +F Q+ 
Sbjct: 55  MKHPNIVAFKESFEADG--HLYIVMEYCDGGDLMQKIKLQRGKL--FPEDTILQWFVQMC 110

Query: 180 AALQYVHSRRILHR 193
             +Q++H +R+LHR
Sbjct: 111 LGVQHIHEKRVLHR 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN-GLCKRIEMAL 105
            LGT  +M+PE L+  +Y    DVWS+GCV+ EM   + P+ ++  S +  L  +I  A 
Sbjct: 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT 227

Query: 106 FPP 108
             P
Sbjct: 228 TAP 230

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           +F GTP Y++PE L++  Y    D W LG VLYEM+    PF+S+  +
Sbjct: 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA 202

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 48.9 bits (116), Expect = 4e-07
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y F +D+WSLG    E+   + P    H
Sbjct: 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 205

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 48.9 bits (116), Expect = 4e-07
 Identities = 20/41 (48%), Positives = 29/41 (70%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 13/93 (13%)

Query: 102 EMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ 161
           E+AL            + L H N+V L   F   + + ++L+ + A+  DL  +I   RQ
Sbjct: 52  EIALL-----------RELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQ 99

Query: 162 KK-CHLAECLVWSYFRQIAAALQYVHSRRILHR 193
            K   +   +V S   QI   + Y+HS  +LHR
Sbjct: 100 AKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHR 132

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
            +F GTP Y++PE LK  KY+   D WS G +LYE+
Sbjct: 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           S +GTP Y++PE L    Y+   D WS+G +LYEM+  Q PF
Sbjct: 203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE +    Y F  D WSLG +LYE
Sbjct: 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYE 184

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNIV L+      S   L+L+ E     DL   +    + + ++   LV SY  Q
Sbjct: 54  KELQHPNIVCLQDVLMQES--RLYLIFEFLSM-DLKKYLDSLPKGQ-YMDAELVKSYLYQ 109

Query: 178 IAAALQYVHSRRILHR 193
           I   + + HSRR+LHR
Sbjct: 110 ILQGILFCHSRRVLHR 125

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 17/42 (40%), Positives = 30/42 (71%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           S  G+ ++M+PE +K+  Y+  +D+WSLGC++ EM+  + PF
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPF 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 48.7 bits (116), Expect = 6e-07
 Identities = 19/42 (45%), Positives = 29/42 (69%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+E+ Y    D W++G +LYEM+   +PF
Sbjct: 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L H NIV L+ AF  R    L+LV E  ++  L L+ A        L    V SY  Q
Sbjct: 55  RQLRHENIVNLKEAF--RRKGRLYLVFEYVERTLLELLEA----SPGGLPPDAVRSYIWQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +  A+ Y HS  I+HR
Sbjct: 109 LLQAIAYCHSHNIIHR 124

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVW--SYF 175
           K L HPNIV L        G+ L++V E    GDL   +   R+    L   L       
Sbjct: 56  KKLSHPNIVRLLGV--CTQGEPLYIVTEYMPGGDLLDFL---RKHGEKL--TLKDLLQMA 108

Query: 176 RQIAAALQYVHSRRILHR 193
            QIA  ++Y+ S+  +HR
Sbjct: 109 LQIAKGMEYLESKNFVHR 126

Length = 258

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYE 43
            V+ S   SF G+PY+M+PE + +   Y   +D+WSLGC + E
Sbjct: 152 VVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLE 194

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (115), Expect = 7e-07
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           ++F GTP Y++PE L    Y+   D W+LG +LYEM+    PF+ +++  N + ++I   
Sbjct: 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--NEMYRKI--- 205

Query: 105 LFPPL--PSGVLYSDKTL 120
           L  PL  P G     K L
Sbjct: 206 LQEPLRFPDGFDRDAKDL 223

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 19/42 (45%), Positives = 28/42 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP +++PE L E  Y+   D W LG ++YEM+  +SPF
Sbjct: 160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.9 bits (114), Expect = 8e-07
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + GTP +M+PE L+  +Y F  D ++LG  LYEM+A + PF
Sbjct: 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPF 197

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 47.9 bits (115), Expect = 9e-07
 Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+PE LK+ K++  SDVWS G +L+E+  L + P+
Sbjct: 171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPY 205

Length = 258

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 47.9 bits (114), Expect = 9e-07
 Identities = 20/41 (48%), Positives = 28/41 (68%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS 46
           S   + +GTP Y+SPE  +   Y+  SD+W+LGCVLYE+ S
Sbjct: 156 SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 122 HPNIVELRSAFA-SRSGQE--LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
           HPNIV L       R+ +E  L LV E  DQ DLA  +++C +    L    +    RQ+
Sbjct: 60  HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPG--LPPETIKDLMRQL 116

Query: 179 AAALQYVHSRRILHR 193
              + ++HS RI+HR
Sbjct: 117 LRGVDFLHSHRIVHR 131

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L    I+    +F      +L +V+E A+ GDL  ++    Q+   L E  VW +F QI 
Sbjct: 56  LDSSYIIRYYESFLD--KGKLNIVMEYAENGDLHKLLK--MQRGRPLPEDQVWRFFIQIL 111

Query: 180 AALQYVHSRRILHR 193
             L ++HS++ILHR
Sbjct: 112 LGLAHLHSKKILHR 125

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 118 KTLH---HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           KTL     P +V+   AF      E+ +VLE  D G LA ++ +       + E ++   
Sbjct: 51  KTLRSCESPYVVKCYGAFYKEG--EISIVLEYMDGGSLADLLKKVG----KIPEPVLAYI 104

Query: 175 FRQIAAALQYVHS-RRILHR 193
            RQI   L Y+H+ R I+HR
Sbjct: 105 ARQILKGLDYLHTKRHIIHR 124

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 17/32 (53%), Positives = 22/32 (68%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           GTP YM+PE L+   Y F  D ++LGC LYE+
Sbjct: 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEM 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPPLPS 111
           +M+PE LKE K++  SDVWS G +L+E+  L + P+    +S   + + ++     P P 
Sbjct: 170 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYP--GMSNAEVLEYLKKGYRLPKPP 227

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYM--SPER 58
           S +GTPY+M+PE +K   Y    D+WSLG +  E  +   G P Y+   P R
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAE---GEPPYLREPPLR 223

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)

Query: 9   DSFLGTPYYMSP-----ERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
           DSF+GTPY+M+P     E +K+  Y + +D+WSLG  L E+       + ++P R+
Sbjct: 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV 223

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 5/56 (8%)

Query: 9   DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L E+       + ++P R+
Sbjct: 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV 216

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 5/47 (10%)

Query: 45  DSFLGTPYYMSP-----ERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
           D+F+GTPY+M+P     E  K+  Y + +D+WSLG  L E+  ++ P
Sbjct: 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP 207

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           +F GTP Y++PE L +  Y    D W LG VLYEM+    PF+S++ +
Sbjct: 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 202

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HP IV+  ++F  R      ++ E  +  DL   + E +     L+E  V  +F Q+ 
Sbjct: 59  LDHPAIVKFHASFLER--DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLL 116

Query: 180 AALQYVHSRRILHR 193
             + Y+H RRILHR
Sbjct: 117 LGVHYMHQRRILHR 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL 59
           +S +GTP Y++PE L+   Y    D WSLG +LYE+    G P + S    
Sbjct: 188 NSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEM--LYGFPPFYSDTLQ 236

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 24/105 (22%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----------------DSFLGT--- 50
           +F GTP Y++PE L+EL+Y    D W+LG ++YE+                +S L     
Sbjct: 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL 214

Query: 51  -PYYMSPERLKELK-YSFPSDVWSLGCVLY---EMVALQSPFFSK 90
            P ++S E +  LK +   +    LGCV     E    Q PFF +
Sbjct: 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 26/35 (74%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++ +GTP++M+PE ++E+ Y+  +D+WSLG    E
Sbjct: 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIE 191

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
             + + S  GTPY+MSPE +    Y   +DVWS+GC + E+
Sbjct: 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 10  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           +F+GTPY+M+PE + E K Y   +D+WSLG  +YE+ +  G P Y   +  +
Sbjct: 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT--GNPPYSDVDAFR 209

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 20/45 (44%), Positives = 29/45 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           S +GTP Y++PE L    Y+   D WS+G +LYEM+  Q PF ++
Sbjct: 207 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ 251

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           +F GTP Y++PE +++  Y    D W LG VLYEM+    PF+ + ++
Sbjct: 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA 202

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           +M+PE LK+  ++  SDVWS G VL+EM  L
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMATL 217

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 7/91 (7%)

Query: 118 KTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +   H NI+ +R          +++++V++L  + DL  +I    Q    L E  +  + 
Sbjct: 59  RHFKHDNIIAIRDILRPPGADFKDVYVVMDLM-ESDLHHII-HSDQP---LTEEHIRYFL 113

Query: 176 RQIAAALQYVHSRRILHRGERETFLSVLGDC 206
            Q+   L+Y+HS  ++HR  + + L V  DC
Sbjct: 114 YQLLRGLKYIHSANVIHRDLKPSNLLVNEDC 144

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 19/39 (48%), Positives = 27/39 (69%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +   +F GTP Y++PE L+ LKY+F  D WS G +LYE+
Sbjct: 151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F+GTP Y++PE +  +     SD WSLGCV++E +    PF
Sbjct: 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPF 193

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 46.6 bits (110), Expect = 3e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           V TS+   F GTP Y++PE L    Y    D W+LG +LYE
Sbjct: 151 VTTST---FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYE 188

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           +M+PE LKE K++  SDVWS G +L+E+  L + P+
Sbjct: 169 WMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPY 204

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNIVE+ S++    G EL++V+E  + G L  ++   R     + E  + +    +  
Sbjct: 74  QHPNIVEMYSSYLV--GDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLAVLK 126

Query: 181 ALQYVHSRRILHR 193
           AL ++H++ ++HR
Sbjct: 127 ALSFLHAQGVIHR 139

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 43  EVDSFLGTPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPF 87
           EV S  GTP YM+PE +   K       +D+WSLGCV+ EM   + P+
Sbjct: 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 45.8 bits (108), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S  GTPY+MSPE +    Y   +D+WS+GC + EM+  + P +++  ++  + K      
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT-EKPPWAEFEAMAAIFKIATQPT 226

Query: 106 FPPLPSGV 113
            P LP  V
Sbjct: 227 NPVLPPHV 234

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 17/31 (54%), Positives = 18/31 (58%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           GTP YM+PE L    YS   D WSLG   YE
Sbjct: 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYE 191

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 45.4 bits (107), Expect = 5e-06
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY--MSPERL 59
           ++F+GTP++M+PE +K+  Y F +D+WSLG    E+    G P    + P R+
Sbjct: 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK--GEPPNSDLHPMRV 209

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE LK+  ++  SDVWS G VL+E+ +    PY
Sbjct: 187 WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPY 222

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 45.7 bits (108), Expect = 5e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERLK 60
            V +  VD+      + +PE LK  K+S  SDVWS G +L+EV S+   PY  MS + +K
Sbjct: 148 RVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK 207

Query: 61  E-LKYSF--------PSDVWSLGCVLYEMVALQSPFFSK 90
           E ++  +        P+DV+ L    +E    + P F K
Sbjct: 208 ECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHK 246

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 19/43 (44%), Positives = 30/43 (69%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +GTP YM+PERL  +  S  +D+++LG +LY+M+ L  P+  K
Sbjct: 192 VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK 234

Length = 932

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 45.5 bits (108), Expect = 5e-06
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKC--HLAECLVWSYFRQ 177
           L H N++ L     +     L +V ELA  G L     +  +K    H     +  Y  Q
Sbjct: 53  LDHENLIRLYGVVLTHP---LMMVTELAPLGSLL----DRLRKDALGHFLISTLCDYAVQ 105

Query: 178 IAAALQYVHSRRILHR 193
           IA  ++Y+ S+R +HR
Sbjct: 106 IANGMRYLESKRFIHR 121

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 45.9 bits (108), Expect = 6e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 6/63 (9%)

Query: 6   SSVDSFLGTPYYMSPERL-KELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMS---PERLK 60
           S   S +GTPYY SPE L  E K Y   SD+W+LGC++YE+ S   TP++ +    + + 
Sbjct: 196 SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG-KTPFHKANNFSQLIS 254

Query: 61  ELK 63
           ELK
Sbjct: 255 ELK 257

Length = 1021

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 45.4 bits (107), Expect = 6e-06
 Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVI-----AECRQKKCHLAECLVW 172
           + L HPN++ L+  F S S ++++L+ + A+  DL  +I     ++  +K   L   +V 
Sbjct: 53  RELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVK 111

Query: 173 SYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
           S   QI   + Y+H+  +LHR  +   + V+G+
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGE 144

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE +    Y    D W+ G +LYEM+A Q PF
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HPNIV+   ++  +   EL++V+E    G L  ++    Q    L E  +    ++
Sbjct: 52  KKCKHPNIVKYYGSYLKKD--ELWIVMEFCSGGSLKDLLKSTNQT---LTESQIAYVCKE 106

Query: 178 IAAALQYVHSRRILHR 193
           +   L+Y+HS  I+HR
Sbjct: 107 LLKGLEYLHSNGIIHR 122

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 45.0 bits (106), Expect = 8e-06
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
           S +GTPY+M+PE +  L Y    D+WSLG ++ E VD   G P Y +   LK +K
Sbjct: 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD---GEPPYFNEPPLKAMK 226

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 6/56 (10%)

Query: 2   SVKTSSVD----SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           + K + V     S +GTPY+M+PE ++    S  SD+WSLGC + E+    G P Y
Sbjct: 146 ATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIEL--LTGNPPY 199

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 49  GTPYYMSPERL----KELKYSFPSDVWSLGCVLYEMVALQSPF 87
           G   YM+PER+       KY   +DVWSLG  L E+   Q P+
Sbjct: 176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPY 218

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
                ++F GTP Y++PE L    Y+   D W+LG +LYE+ + L  P+Y
Sbjct: 146 DDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL-PPFY 194

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L     +    +L+LV E   Q DL   +         L   L+ SY  Q
Sbjct: 54  KELNHPNIVKLLDVIHTE--NKLYLVFEFLHQ-DLKKFMDASPLSGIPLP--LIKSYLFQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS R+LHR
Sbjct: 109 LLQGLAFCHSHRVLHR 124

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVI-----AECRQKKCHLAECLVW 172
           + L HPN++ L+  F S + ++++L+ + A+  DL  +I     ++  +K   L   +V 
Sbjct: 53  RELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVK 111

Query: 173 SYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
           S   QI   + Y+H+  +LHR  +   + V+G+
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGE 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE +    Y    D W+ G +LYEM+A Q+PF
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 45  DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +SF+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 45  DSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPF 87
           ++F GT  YM+PE + +    Y  P+D+WSLGC + EM   + PF
Sbjct: 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF 211

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE L     YS   D+WS+GC+  EM     P F
Sbjct: 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEM-ITGKPLF 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 16/33 (48%), Positives = 24/33 (72%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +GT  YM+PE +K  +Y+F  D W LGC++YE+
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           GT  YM+PE LKE  YS+P D +++GC +YE+
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 10/125 (8%)

Query: 10  SFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSF 66
           + +GTP YM+PE L  L     S  SD+WSLG  LYE     G P +   +       S 
Sbjct: 167 TSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYE--LLTGLPPFEGEKN-----SSA 219

Query: 67  PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIV 126
            S    +   L           S    ++     +   L    P   L S   L H  + 
Sbjct: 220 TSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Query: 127 ELRSA 131
            L+  
Sbjct: 280 HLKLK 284

Length = 384

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 4/55 (7%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
           S +GTPY+M+PE +  L Y    D+WSLG ++ E VD   G P Y +   L+ +K
Sbjct: 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD---GEPPYFNEPPLQAMK 225

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV+   +  S     L + LE    G +A ++           E LV ++ RQ
Sbjct: 61  KELQHENIVQYLGS--SLDADHLNIFLEYVPGGSVAALL----NNYGAFEETLVRNFVRQ 114

Query: 178 IAAALQYVHSRRILHR 193
           I   L Y+H+R I+HR
Sbjct: 115 ILKGLNYLHNRGIIHR 130

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 5/40 (12%)

Query: 9   DSFLGTPYYMSP-----ERLKELKYSFPSDVWSLGCVLYE 43
           D+F+GTPY+M+P     E  K+  Y + +D+WSLG  L E
Sbjct: 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           F+GTP Y++PE +  +     SD WSLGCV++E     G P
Sbjct: 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEF--LFGYP 191

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 45  DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTPY+M+PE +      +  Y F SD+WSLG    EM     P    H
Sbjct: 169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 19/44 (43%), Positives = 28/44 (63%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           S +GTP Y++PE L    Y+   D WS+G +L+EM+  Q PF +
Sbjct: 207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLA 250

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 44.2 bits (104), Expect = 2e-05
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE +    Y    D W+ G +LYEM+A Q PF
Sbjct: 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 10/83 (12%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP---FFSKHISLNGL----C 98
           +++GT  YM+PER+   +Y   SDVWSLG    E+   + P         SL  L    C
Sbjct: 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC 211

Query: 99  KRIEMALFPPLPSGVLYSDKTLH 121
              E    P LP G  +S+K +H
Sbjct: 212 IVDEDP--PVLPVG-QFSEKFVH 231

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 21/101 (20%)

Query: 98  CKRI--EMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDL 152
            KRI  E+ L            + L H NI+ L       S     ++++V EL +  DL
Sbjct: 43  AKRILREIKLL-----------RHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DL 90

Query: 153 ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
             VI    +    L +  +  +  QI   L+Y+HS  ++HR
Sbjct: 91  HKVI----KSPQPLTDDHIQYFLYQILRGLKYLHSANVIHR 127

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV L     S    +L LV E  DQ DL      C      +   +V S+  Q
Sbjct: 54  KELKHKNIVRLYDVLHSDK--KLTLVFEYCDQ-DLKKYFDSCNGD---IDPEIVKSFMFQ 107

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS  +LHR
Sbjct: 108 LLKGLAFCHSHNVLHR 123

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 17/46 (36%), Positives = 29/46 (63%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + +GTPY+M+PE +    Y    D+WSLG +  EMV  + P+ +++
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 46  SFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
           S  G+ ++M+PE        YS   D+WSLGCV+ EM A + P +S   ++  + K    
Sbjct: 169 SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNK 227

Query: 104 ALFPPLPSGVL 114
              PP+P  V 
Sbjct: 228 RSAPPIPPDVS 238

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 30  FPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           FP D   LG      D+      +M+ E L   +YS  SDVWS G +L+E++ L Q+P+
Sbjct: 168 FPMDYHCLG------DNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPY 220

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 48  LGTPYYMSPERLKELK------YSFPSDVWSLGCVLYEMVALQSPF 87
           +GTP Y++PE L  +       Y    D WSLG + YEM+  +SPF
Sbjct: 164 VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
           + +PE L+E K+S  SDVWS G +L+E+ SF   PY   P  LK++
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDV 208

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
           +GTP Y+SPE L+ +     KY    D WSLG  +YEM+  ++PF+++ +
Sbjct: 164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNIV+L +   + + ++++LV E  +  DL  VI     +   L +        Q+  
Sbjct: 65  DHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVI-----RANILEDVHKRYIMYQLLK 118

Query: 181 ALQYVHSRRILHR 193
           AL+Y+HS  ++HR
Sbjct: 119 ALKYIHSGNVIHR 131

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +M PE +   K++  SDVWS G VL+E+ ++   P+Y
Sbjct: 190 WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 46  SFLGTPYYMSPERL---KELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           SF+GTPY+M+PE     K   Y+   D+W++G    E+  LQ P F  H
Sbjct: 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +GT  YM+PE +K  +Y+F  D W+LGC+LYE+
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 43.4 bits (102), Expect = 3e-05
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           +GT  YM+PE +   KY+F  D W LGC++YE+     +P+    ER+K
Sbjct: 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG-QSPFRKRKERVK 209

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 18/39 (46%), Positives = 25/39 (64%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           + + S  GTPY+MSPE +    Y   +DVWSLGC + E+
Sbjct: 164 TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 40  VLYEVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           ++   + F+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 164 IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH 205

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 43.6 bits (102), Expect = 3e-05
 Identities = 17/46 (36%), Positives = 29/46 (63%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + +GTPY+M+PE +    Y    D+WSLG +  EMV  + P+ +++
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 45  DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +SF+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 226

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)

Query: 46  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
           +F+GTP +M+PE ++++  Y F +D+WS G    E+    +P+
Sbjct: 165 TFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPY 207

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 5/47 (10%)

Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +GTP Y+SPE L+ +     +Y    D WSLG  +YEM+  ++PF++
Sbjct: 164 VGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)

Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 258

Query: 101 I 101
           I
Sbjct: 259 I 259

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 43.5 bits (102), Expect = 3e-05
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 45  DSFLGTPYYMSPERLKELK----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK       Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 258

Query: 101 I 101
           I
Sbjct: 259 I 259

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
              P +V+L  +F  +    L+LV+E    GDLA ++    +    L E +   Y  +I 
Sbjct: 50  AQSPYVVKLYYSFQGKK--NLYLVMEYLPGGDLASLL----ENVGSLDEDVARIYIAEIV 103

Query: 180 AALQYVHSRRILHR 193
            AL+Y+HS  I+HR
Sbjct: 104 LALEYLHSNGIIHR 117

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE L   K YS P D+WS+GC+  E+++ + P F
Sbjct: 161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR-PLF 199

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSP--ERLKELKYSF 66
           S +GTPY+M+PE +  L Y    D+WSLG ++ E +D     PY+  P  + ++ ++ + 
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG--EPPYFNEPPLQAMRRIRDNL 234

Query: 67  PSDV 70
           P  V
Sbjct: 235 PPRV 238

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 43.2 bits (101), Expect = 4e-05
 Identities = 17/46 (36%), Positives = 29/46 (63%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + +GTPY+M+PE +    Y    D+WSLG +  EMV  + P+ +++
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 45  DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +SF+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 175 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 222

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 43.1 bits (101), Expect = 4e-05
 Identities = 16/47 (34%), Positives = 29/47 (61%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +++  Y   +D+WSLG    E+   + P    H
Sbjct: 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF- 175
           +HPNI     AF  ++      +L+LV+EL   G +  ++   R+K   L E  + +Y  
Sbjct: 61  NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWI-AYIL 119

Query: 176 RQIAAALQYVHSRRILHR 193
           R+    L Y+H  +++HR
Sbjct: 120 RETLRGLAYLHENKVIHR 137

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           T +Y +PE L +  Y+ P D+WS+GC+  EM   + P F  +   + L K  ++   PP
Sbjct: 170 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPP 227

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           ++ +PE L+  K+S  SDVWS G  LYE+     P  S
Sbjct: 177 FWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS 214

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           +GT  YM+PE L   +Y+   D W LGC++YE+     +P+    E++K
Sbjct: 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEG-QSPFRGRKEKVK 209

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 42.7 bits (100), Expect = 5e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 45  DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTPY+M+PE +      +  Y + SD+WSLG    EM     P    H
Sbjct: 179 NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
            LGT  +M+PE L+  +Y    DVWS+GCV+ E+
Sbjct: 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEM 201

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 14/35 (40%), Positives = 26/35 (74%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           S  G+ ++M+PE +K+  Y+  +D+WSLGC++ E+
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM 205

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTPY+M+PE +      +  Y   SDVWSLG    E+   + P    H
Sbjct: 171 NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH 222

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           SF GT  YM+PE +    ++  +D WS G +++EM+    PF  K 
Sbjct: 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD 202

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 42.7 bits (100), Expect = 6e-05
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
           +GTP Y+SPE L+ +     KY    D WSLG  +YEM+  ++PF+++ +
Sbjct: 164 VGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 41  LYEVDSFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPFF--SKHISLNG 96
                SF GT  YM+PE  R     +    D WSLG + +E++   SPF    +  S + 
Sbjct: 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSE 219

Query: 97  LCKRIEMALFPPLPS 111
           + +RI +   PP P 
Sbjct: 220 ISRRI-LKSKPPFPK 233

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.4 bits (99), Expect = 6e-05
 Identities = 16/45 (35%), Positives = 28/45 (62%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.5 bits (100), Expect = 7e-05
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 1   MSVKTSSVD---SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           M   T S D   +F GTPYY++PE  +   YS  +D++SLG +LYE+
Sbjct: 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYEL 238

Length = 496

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 42.3 bits (99), Expect = 7e-05
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE-VDSFLGTPYYMSPERLKELK 63
           S +GTPY+M+PE +    Y    D+WSLG ++ E VD   G P Y S   ++ +K
Sbjct: 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD---GEPPYFSDSPVQAMK 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+ E L   +YS  SDVWS G +L+E+ +   TPY
Sbjct: 185 WMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPY 220

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 42.3 bits (99), Expect = 7e-05
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 46  SFLGTPYYMSPERL---KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
           SF+GTPY+M+PE     ++  Y+   D+W++G    E+  LQ P F  H  +  L    +
Sbjct: 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH-PMRALFLMTK 223

Query: 103 MALFPPLPSGVLYSDKTLHH 122
               PP     +    + HH
Sbjct: 224 SNFQPPKLKDKMKWSNSFHH 243

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.2 bits (99), Expect = 8e-05
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 17/108 (15%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HPNIV    ++    G EL++V+E    G L  V+ E    +  +A     +  R+
Sbjct: 71  RENKHPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRE 123

Query: 178 IAAALQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
              AL+++HS +++HR           +    L+  G C +   EQ+K
Sbjct: 124 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
           S +GTP Y++PE   +  Y+   D WSLG ++YEM+    PF S+    +   +    E 
Sbjct: 195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKET 254

Query: 104 ALFPP 108
            +FPP
Sbjct: 255 LVFPP 259

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNIV+L+  F  R   EL+ V E  +     L+    R+ K   +E ++ S   QI  
Sbjct: 56  EHPNIVKLKEVF--RENDELYFVFEYMEGNLYQLMKD--RKGKP-FSESVIRSIIYQILQ 110

Query: 181 ALQYVHSRRILHR 193
            L ++H     HR
Sbjct: 111 GLAHIHKHGFFHR 123

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
           T +Y +PE L +  Y+ P D+WS+GC+  EM   + P F     ++ L K +++   P  
Sbjct: 172 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLP-- 228

Query: 110 PSGVLYSDKTLHHPNIVEL-RSAFASRSGQEL 140
                        P  V L R AF S+S Q +
Sbjct: 229 --------GEEDWPRDVALPRQAFHSKSAQPI 252

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 42.0 bits (98), Expect = 9e-05
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L +PNIV    +F    G ELF+V+E    G L  V+ E    +  +A     +  R+
Sbjct: 71  KELKNPNIVNFLDSFLV--GDELFVVMEYLAGGSLTDVVTETCMDEAQIA-----AVCRE 123

Query: 178 IAAALQYVHSRRILHRG----------ERETFLSVLGDCVRTVSEQAK 215
              AL+++H+ +++HR           +    L+  G C +   EQ+K
Sbjct: 124 CLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK 171

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           SF+GT  Y++PE +    +    D W+LG +LYEM+   +PF   
Sbjct: 191 SFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
           S +GTP Y++PE   +  Y+   D WSLG ++YEM+    PF S+    +   +    E 
Sbjct: 195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKET 254

Query: 104 ALFPP 108
            +FPP
Sbjct: 255 LIFPP 259

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 42.2 bits (99), Expect = 9e-05
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE +    Y+F SDVWS G +L+E+ S   +PY
Sbjct: 282 WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY 317

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HP + +L S F ++    LF V+E  + GDL   I    +      E     Y  +I   
Sbjct: 55  HPFLTQLHSCFQTKD--RLFFVMEYVNGGDLMFHIQRSGR----FDEPRARFYAAEIVLG 108

Query: 182 LQYVHSRRILHR 193
           LQ++H R I++R
Sbjct: 109 LQFLHERGIIYR 120

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           KT+S  +F GTP Y++PE L++  Y    D W LG VLYE+   L  P+Y
Sbjct: 151 KTTS--TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL-PPFY 197

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPN+V+       R   ++++ +E    G L  ++   R     L E ++  Y  Q+ 
Sbjct: 56  LKHPNLVKYYGVEVHRE--KVYIFMEYCSGGTLEELLEHGRI----LDEHVIRVYTLQLL 109

Query: 180 AALQYVHSRRILHR 193
             L Y+HS  I+HR
Sbjct: 110 EGLAYLHSHGIVHR 123

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 23/30 (76%), Gaps = 1/30 (3%)

Query: 10  SFLGTPYYMSPERLKELK-YSFPSDVWSLG 38
           +F+GTP +M+PE ++++  Y F +D+WS G
Sbjct: 165 TFVGTPCWMAPEVMEQVHGYDFKADIWSFG 194

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 19  SPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +PE L+E K+S  SDVWS G +L+E+ SF   PY
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 45  DSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFS 89
           ++F GT  Y++PE L + K Y+   D WSLG +++EM    SPF++
Sbjct: 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPE 57
           +M PE +   +Y+  SDVW+ G VL+E+ S+   PYY M+ E
Sbjct: 198 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           GTP Y++PE +    Y  P D W++G +LYE +    PFF
Sbjct: 178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 217

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)

Query: 45  DSFLGTPYYMSPERLKELK----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK       Y    D WS+G  L+EM+   +PF++   SL G   +
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--SLVGTYSK 258

Query: 101 I 101
           I
Sbjct: 259 I 259

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 16/36 (44%), Positives = 23/36 (63%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE +    Y+F SDVWS G +L+E+ S    PY
Sbjct: 209 WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 10/83 (12%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP--ERLKELKYSF-------- 66
           +M+PE L +  Y+  SDVWS G +L+E+ +  G+PY   P  E  K LK  +        
Sbjct: 200 WMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNC 259

Query: 67  PSDVWSLGCVLYEMVALQSPFFS 89
             +++ L    +  V  Q P F 
Sbjct: 260 TQELYHLMRDCWHEVPSQRPTFK 282

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           GTP Y++PE ++   +    D W++G +LYE +A   PFF
Sbjct: 177 GTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216

Length = 329

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 10  SFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYE 43
           SF+GTPY+M+PE     +   Y    D+W+LG    E
Sbjct: 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 7   SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
           +  +F GTP Y++PE L++  Y    D W LG VLYE+    G P + S
Sbjct: 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEM--LYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           + + S  GTPY+MSPE +    Y   +DVWS+ C + E+
Sbjct: 164 TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
           ++  +HP +V L S F + S   LF V+E  + GDL   +   RQ+K  L E     Y  
Sbjct: 50  EQASNHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSA 103

Query: 177 QIAAALQYVHSRRILHR 193
           +I+ AL Y+H R I++R
Sbjct: 104 EISLALNYLHERGIIYR 120

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 16/35 (45%), Positives = 25/35 (71%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +F GTP Y++PE L+E+ Y    D W++G +LYE+
Sbjct: 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE L +  Y+ P D+WS+GC+  E+   + P F
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR-PLF 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
            +  +F GTP Y++PE L +  Y    D W LG VLYE+    G P + S
Sbjct: 151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM--LYGLPPFYS 198

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
           +++ +F GTP Y++PE L++  Y    D W LG V+YE+       Y    ERL EL
Sbjct: 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 206

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           + + S  GTPY+MSPE +    Y   +D+WS+GC + E+
Sbjct: 164 TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 19/75 (25%)

Query: 9   DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLG-------------CVLYEVDSFLGT 50
           ++F+GTPY+M+PE +      +  Y F SD+WSLG             C ++ + +    
Sbjct: 169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228

Query: 51  PYYMSPERLKELKYS 65
           P   +P RLK  K+S
Sbjct: 229 PRNPAP-RLKSKKWS 242

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 15/36 (41%), Positives = 26/36 (72%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+
Sbjct: 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)

Query: 4   KTSSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEV 44
           K+S  +SF+GTPY+M+PE    + E +Y    DVWSLG    E+
Sbjct: 170 KSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 14/36 (38%), Positives = 26/36 (72%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           ++F+GTP++M+PE +++  Y   +D+WSLG    E+
Sbjct: 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +M PE +   K++  SD+WS G VL+E+ S+   PYY
Sbjct: 192 WMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 4/39 (10%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEMV----ALQSP 86
           ++ + E LKE K+S+ SDVWS G  LYE++    + QSP
Sbjct: 175 FWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP 213

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTP 51
           ++ + E LKE K+S+ SDVWS G  LYE+    DS    P
Sbjct: 175 FWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPP 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERL 59
           +MSPE LK+  ++  SDVWS G VL+E+ +    PY  MS E++
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQV 230

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           +M+ E L +  Y+  SDVWS G +L+E+ +  G PY  ++PERL  L
Sbjct: 195 WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNL 241

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +M PE +   K+S  SD+WS G VL+E+ SF   PYY
Sbjct: 192 WMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYY 228

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKE 61
           + +PE L   +Y+  SDVWS G +L+E  S   TPY  MS ++ +E
Sbjct: 161 WTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE 206

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           GTP Y++PE ++   ++   D W+LG ++YEM+    PFF  
Sbjct: 160 GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 19/76 (25%), Positives = 37/76 (48%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+   P IV+   AF   S   + + +E  + G L  +  + +++   + E ++      
Sbjct: 54  KSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAES 113

Query: 178 IAAALQYVHSRRILHR 193
           +   L Y+HSR+I+HR
Sbjct: 114 VLKGLSYLHSRKIIHR 129

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           S +GTP Y++PE L    Y+   D WS+G +LYE+   +G P +++ 
Sbjct: 203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM--LVGQPPFLAD 247

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
           +++ +F GTP Y++PE L++  Y    D W LG V+YE+       Y    E+L EL
Sbjct: 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 8   VDSFLGTPYYMSPERLKELKYSF---PSDVWSLGCVLYE 43
           V S  GTP YM+PE +   K       +D+WSLGCV+ E
Sbjct: 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLE 198

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 3   VKTSSVDS----FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           V T  V+S    ++GT  YM+PER+   +Y   SDVWSLG    E+
Sbjct: 141 VSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL 186

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNI+ L      R    L LV EL D     L+    + +K  L E  V SY  Q+  
Sbjct: 56  PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELI----KGRKRPLPEKRVKSYMYQLLK 111

Query: 181 ALQYVHSRRILHR 193
           +L ++H   I HR
Sbjct: 112 SLDHMHRNGIFHR 124

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE  L +  Y    D+W++GCV +E+++L  P F
Sbjct: 161 TRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLF-PLF 199

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 15  PY-YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           PY + +PE      +S  SDVWS G +LYE+ ++   PY
Sbjct: 167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY 205

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 10/93 (10%)

Query: 118 KTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F   S     Q+++LV  L    DL  ++   + +K  L++  +  
Sbjct: 69  KHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGA-DLNNIV---KCQK--LSDDHIQF 122

Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC 206
              QI   L+Y+HS  I+HR  + + ++V  DC
Sbjct: 123 LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 48  LGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           +GT  YM+PE L K + Y   +D +SLGC+L++++   SPF            R+ + + 
Sbjct: 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 215

Query: 107 PPLP 110
             LP
Sbjct: 216 VELP 219

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 17  YMSPERL---KELKYSFPSDVWSLGCVLYEV 44
           YM+PER+       Y   SDVWSLG  LYEV
Sbjct: 173 YMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP--ERLKELK 63
           +M+PE L +  Y+  SDVWS G +L+E+ +  G+PY   P  E  K LK
Sbjct: 208 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 256

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE LK+  ++  SD+WS G VL+E+ S    PY
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPY 222

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 46  SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
           S++ + +Y +PE  L    Y+   D+WSLGC++ EM+ L  P FS   S++ L + I++
Sbjct: 229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI-LGYPIFSGQSSVDQLVRIIQV 286

Length = 440

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 24/35 (68%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +F GTP Y++PE L+   Y F  D W+LG +++E+
Sbjct: 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 15/38 (39%), Positives = 26/38 (68%)

Query: 7   SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +  +F GTP Y++PE L+  +Y F  D W+LG +++E+
Sbjct: 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
           +++ +F GTP Y++PE L++  Y    D W LG V+YE+       Y    E+L EL
Sbjct: 151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 207

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           S +GTP Y++PE L    Y+   D WS+G +L+E+   +G P +++P
Sbjct: 207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM--LVGQPPFLAP 251

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           ++ + S   + +GTPY+M+PE +    Y    D+WSLG +  E+    G P Y++   L+
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLR 222

Query: 61  EL 62
            L
Sbjct: 223 AL 224

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           ++ + S   + +GTPY+M+PE +    Y    D+WSLG +  E+    G P Y++   L+
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLR 222

Query: 61  EL 62
            L
Sbjct: 223 AL 224

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 21/84 (25%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAEC-------- 169
           K + H NIV L+    S   + L+LV E  D  DL          K H+           
Sbjct: 56  KEMQHGNIVRLQDVVHSE--KRLYLVFEYLDL-DL----------KKHMDSSPDFAKNPR 102

Query: 170 LVWSYFRQIAAALQYVHSRRILHR 193
           L+ +Y  QI   + Y HS R+LHR
Sbjct: 103 LIKTYLYQILRGIAYCHSHRVLHR 126

Length = 294

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           S +GTP Y++PE   +  Y+   D WSLG ++YE
Sbjct: 198 STVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL--KE 61
             S    + GTP +M+PE L+  +Y F  D ++LG  LYE+ +  G P+    E++  KE
Sbjct: 150 GQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARG-PFRARGEKVENKE 208

Query: 62  LKYSFPSD 69
           LK    +D
Sbjct: 209 LKQRILND 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HPNIV L  A+   +  +L++++E  D G L  ++ E  +    L E  +    RQ+  A
Sbjct: 61  HPNIVGLYEAYFYEN--KLWILIEFCDGGALDSIMLELERG---LTEPQIRYVCRQMLEA 115

Query: 182 LQYVHSRRILHR 193
           L ++HS +++HR
Sbjct: 116 LNFLHSHKVIHR 127

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 6   SSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLG 38
           S  +SF+GTPY+M+PE    + E +Y    DVWSLG
Sbjct: 166 SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           ++ + S   + +GTPY+M+PE +    Y    D+WSLG +  E+    G P Y++   L+
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE--GEPPYLNENPLR 222

Query: 61  EL 62
            L
Sbjct: 223 AL 224

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           ++ + S   + +GTPY+M+PE +    Y    D+WSLG +  E+    G P Y++   L+
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLR 223

Query: 61  EL 62
            L
Sbjct: 224 AL 225

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           +M+PE +    Y+F SDVWS G +L+E+ +L  SP+
Sbjct: 282 WMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY 317

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           KTL+H NIV+ +   + + G+ L L++E    G L   +    + K +LA+ L+++  +Q
Sbjct: 61  KTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP---KHKLNLAQLLLFA--QQ 115

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+HS+  +HR
Sbjct: 116 ICEGMAYLHSQHYIHR 131

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE L   + YS P D+WS+GC+  EMV  Q P F
Sbjct: 166 TLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN-QKPLF 204

Length = 294

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           S +GTP Y++PE   +  Y    D WSLG +++E +    PF S+
Sbjct: 207 STVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSE 251

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
           ++ +PE L E K+S  SDVWS G VLYE+
Sbjct: 176 FWYAPESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +F GTP Y++PE L   KY+   D WS G +LYE+
Sbjct: 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 16/40 (40%), Positives = 25/40 (62%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           + +  +F GTP Y++PE +++  Y    D W LG VLYE+
Sbjct: 150 SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 13  GTPYYMSPERL----KELKYSFPSDVWSLGCVLYE 43
           G   YM+PER+       KY   +DVWSLG  L E
Sbjct: 176 GCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE 210

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +TL H NIV+ +       G+ L L++E    G L   +   R +   +    +  +  Q
Sbjct: 61  RTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ---INLKRLLLFSSQ 117

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+ S+R +HR
Sbjct: 118 ICKGMDYLGSQRYIHR 133

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 28/135 (20%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------------------DSFLG 49
           SF GT  YM+PE +    ++  +D WS G +++E+                     + LG
Sbjct: 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG 216

Query: 50  TPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
            P ++SPE    L+  F   P++    G    E +  + PFFS  I  N L +R E+   
Sbjct: 217 MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIK-RHPFFS-TIDWNKLYRR-EIK-- 271

Query: 107 PPLPSGVLYSDKTLH 121
           PP    V   D T +
Sbjct: 272 PPFKPAVGRPDDTFY 286

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI-----SLNGL--CKRI 101
           GT    SPE L    Y   +D+WS G VL+EM       F K +      L  +  C ++
Sbjct: 249 GTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308

Query: 102 EMALFP 107
               FP
Sbjct: 309 HPLEFP 314

Length = 392

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP--ERLKELK 63
           +M+PE L +  Y+  SDVWS G +++E+ +  G+PY   P  E  K LK
Sbjct: 205 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 253

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFS 89
           T +Y +PE L   + YS P D+WS+GC+  EMV  + P F 
Sbjct: 162 TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMV-NRRPLFP 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 46  SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
            ++ T +Y +PE L  +  Y  P DVW++GC++ E++  + P F     ++ L   I+  
Sbjct: 160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE-PLFPGDSDIDQL-YLIQKC 217

Query: 105 LFPPLPS 111
           L P  PS
Sbjct: 218 LGPLPPS 224

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 50  TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
           T +Y +PE L    +Y+   D+WS+GC+L EM+ L  P F    +LN L K IE
Sbjct: 175 TRWYRAPEILLGSTRYTKGVDMWSVGCILGEML-LGKPLFPGTSTLNQLEKIIE 227

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 39.3 bits (91), Expect = 7e-04
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 6   SSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEV 44
           S  +SF+GTPY+M+PE    + E +Y    DVWSLG    E+
Sbjct: 176 SPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           ++ +PE L E K+S  SDVWS G VLYE+
Sbjct: 176 FWYAPESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H N+V L   F  R  + L+LV E  D      V+ +  +    L E  V  Y  Q
Sbjct: 55  KQLRHENLVNLIEVF--RRKKRLYLVFEFVDH----TVLDDLEKYPNGLDESRVRKYLFQ 108

Query: 178 IAAALQYVHSRRILHR 193
           I   +++ HS  I+HR
Sbjct: 109 ILRGIEFCHSHNIIHR 124

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 39.3 bits (91), Expect = 7e-04
 Identities = 16/37 (43%), Positives = 25/37 (67%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +M PE +   K++  SDVWSLG VL+E+ ++   P+Y
Sbjct: 188 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 39.3 bits (91), Expect = 8e-04
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 6   SSVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEV 44
           +  + F+GTPY+M+PE    + E +Y    DVWSLG    E+
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HP+IV+L       +   +++V+ELA  G+L   + +  +    LA  +++SY  Q
Sbjct: 62  RQFDHPHIVKLIGVI---TENPVWIVMELAPLGELRSYL-QVNKYSLDLASLILYSY--Q 115

Query: 178 IAAALQYVHSRRILHR 193
           ++ AL Y+ S+R +HR
Sbjct: 116 LSTALAYLESKRFVHR 131

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 45  DSFLGTP-----YYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
            SF+ TP     YY +PE +  + Y    D+WS+GC++ EM+
Sbjct: 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 211

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 39.3 bits (91), Expect = 9e-04
 Identities = 15/38 (39%), Positives = 25/38 (65%)

Query: 7   SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +  +F GTP Y++PE L+   Y F  D W+LG +++E+
Sbjct: 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 38.9 bits (91), Expect = 9e-04
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 19  SPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +PE +   K++  SDVWS G V++EV S+   PY+
Sbjct: 176 APEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 39.2 bits (92), Expect = 9e-04
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQEL------FLVLELADQGDLALVIAECRQKKCHLAECLV 171
           K L HPN+V L      R  +        ++V    D  DL+ ++         L E  +
Sbjct: 62  KKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPS---VKLTESQI 117

Query: 172 WSYFRQIAAALQYVHSRRILHR 193
             Y  Q+   + Y+H   ILHR
Sbjct: 118 KCYMLQLLEGINYLHENHILHR 139

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 49  GTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
            T +Y +PE L    KY    D+W++GC+  E++   SP F 
Sbjct: 162 ATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG-SPLFP 202

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE  L   +YS P D+WS+G +  EM A + P F
Sbjct: 164 TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEM-ATKKPLF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
             ++ S + T +Y +PE L +  Y+ P D+WS+GC+  E
Sbjct: 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAE 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
           S +GTP Y++PE L    Y+   D WS+G +LYE+   +G P +++
Sbjct: 207 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM--LVGQPPFLA 250

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL 182
           P + +L  +F  +S   L+LV+E  + GD A +I    +    L E     Y  ++   +
Sbjct: 57  PYVAKLYYSF--QSKDYLYLVMEYLNGGDCASLI----KTLGGLPEDWAKQYIAEVVLGV 110

Query: 183 QYVHSRRILHR 193
           + +H R I+HR
Sbjct: 111 EDLHQRGIIHR 121

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y +PE  L   +Y+   D+WS+GC+  E++  + P F
Sbjct: 169 TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPLF 207

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 19/74 (25%)

Query: 12  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEVDSFLG-TPYYMSPERLKEL--- 62
           +GTP Y+SPE L+ +     +Y    D WSLG  +YE+    G TP+Y   E L E    
Sbjct: 164 VGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEM--LYGETPFY--AESLVETYGK 219

Query: 63  ------KYSFPSDV 70
                  + FP DV
Sbjct: 220 IMNHKEHFQFPPDV 233

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 14/28 (50%), Positives = 19/28 (67%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++ +PE L+  K+S  SDVWS G  LYE
Sbjct: 177 FWYAPECLRTSKFSSASDVWSFGVTLYE 204

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)

Query: 9   DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEV 44
           ++F+GTPY+M+PE +      +  Y + SD+WSLG    E+
Sbjct: 179 NTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 53  YMSPERL---KELKYSFPSDVWSLGCVLYEM 80
           YM+PER+       Y   SDVWSLG  LYE+
Sbjct: 173 YMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP--ERLKELK 63
           +M+PE L +  Y+  SDVWS G +L+E+ +  G+PY   P  E  K LK
Sbjct: 202 WMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 250

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 121 HHPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +HPN+V+    F       G +L+LVLEL + G +  ++         L E ++      
Sbjct: 77  NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYG 136

Query: 178 IAAALQYVHSRRILHR 193
               LQ++H+ RI+HR
Sbjct: 137 ALLGLQHLHNNRIIHR 152

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GT  YM+PE L    +    D WSLG ++Y+M+    PF
Sbjct: 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF 200

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +  GTP Y++PE L  + +   +D W+LG  +YE++    PF++
Sbjct: 187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230

Length = 340

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 38.7 bits (91), Expect = 0.001
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GT  Y SPE++K   Y    D W++G + YE++  + PF
Sbjct: 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPF 206

Length = 267

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE + +  Y+  SDVWS G +L+E+ S   +PY
Sbjct: 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 43  EVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
           E+  ++ T +Y +PE  L  + Y+   D+WS+GC++ EM+    P F  H  L+ L + +
Sbjct: 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEML-TGKPLFKGHDHLDQLMEIM 229

Query: 102 EMALFPP 108
           ++   P 
Sbjct: 230 KVTGTPS 236

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +MSPE +   K+S  SD+WS G VL+EV S+   PY
Sbjct: 192 WMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 227

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP--ERLKELK 63
           +M+PE L +  Y+  SDVWS G +++E+ +  G+PY   P  E  K L+
Sbjct: 202 WMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR 250

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 17/36 (47%), Positives = 25/36 (69%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE + +  Y+  SDVWS G +L+E+ S  GTPY
Sbjct: 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY 340

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 37.8 bits (89), Expect = 0.002
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 29/80 (36%)

Query: 14  TPYYMSPERL-KELKYSFPSDVWSLGCVLYEV---------DS----------FLGTPYY 53
           T +Y +PE L     YS   D+WS+GC+  E+         DS           LGTP  
Sbjct: 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTP-- 218

Query: 54  MSPE------RLKELKYSFP 67
            + E      +L + K +FP
Sbjct: 219 -TEESWPGVTKLPDYKPTFP 237

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 9/74 (12%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAE-CLVWSYFRQIA 179
           HH N+V++ +++    G EL++V+E  + G L  ++   R  +  +A  CL       + 
Sbjct: 77  HHENVVDMYNSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCL------SVL 128

Query: 180 AALQYVHSRRILHR 193
            AL Y+H++ ++HR
Sbjct: 129 RALSYLHNQGVIHR 142

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
            L+HP+I+ +  A    S   LF+  E    G ++ ++     K     E ++ +Y  Q+
Sbjct: 59  RLNHPHIIRMLGATCEDSHFNLFV--EWMAGGSVSHLL----SKYGAFKEAVIINYTEQL 112

Query: 179 AAALQYVHSRRILHR 193
              L Y+H  +I+HR
Sbjct: 113 LRGLSYLHENQIIHR 127

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HP + +L   F  ++   LF V+E  + GDL   I + R+      E     Y  +I +A
Sbjct: 55  HPFLTQLYCCF--QTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEITSA 108

Query: 182 LQYVHSRRILHR 193
           L ++H + I++R
Sbjct: 109 LMFLHDKGIIYR 120

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           +F GTP Y++PE L++  Y    D W LG V+YE+
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +GTP YM+PERL  +  S  +D+++LG +LY++ + L  PY
Sbjct: 192 VGTPDYMAPERLLGVPASESTDIYALGVILYQMLT-LSFPY 231

Length = 932

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)

Query: 9   DSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEV 44
           ++F GT  YM+PE + +    Y  P+D+WSLGC + E+
Sbjct: 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV+        + + L + LE    G     I  C +      E LV  +  Q
Sbjct: 63  KDLDHLNIVQYLGF--ETTEEYLSIFLEYVPGGS----IGSCLRTYGRFEEQLVRFFTEQ 116

Query: 178 IAAALQYVHSRRILHR 193
           +   L Y+HS+ ILHR
Sbjct: 117 VLEGLAYLHSKGILHR 132

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 17/73 (23%)

Query: 12  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL---- 62
           +GTP Y+SPE L+ +     KY    D WSLG  +YE+  +  TP+Y   E L E     
Sbjct: 164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM-LYGETPFY--AESLVETYGKI 220

Query: 63  -----KYSFPSDV 70
                ++ FPS +
Sbjct: 221 MNHEERFQFPSHI 233

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 5/35 (14%)

Query: 9   DSFLGTPYYMSPERL-----KELKYSFPSDVWSLG 38
           ++F+GTPY+M+PE +      +  Y   SDVWSLG
Sbjct: 171 NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG 205

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           +MSPE LK+  ++  SDVWS G VL+E+  L + P+
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 222

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 46  SFLGTPYYMSPERLK-ELKYSFPSDVWSLGCVLYEMVALQSPFF--SKHISLNGLCKRIE 102
           SF GT  YM+PE ++ +  +    D WSLG +++E++   SPF    +  + + + +RI 
Sbjct: 165 SFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI- 223

Query: 103 MALFPPLPS 111
           +   PP PS
Sbjct: 224 LKCDPPFPS 232

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           +M+PE +    Y+  SDVWS G +L+E+ +  GTPY   P  + E  Y+
Sbjct: 307 WMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP--MNEQFYN 353

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+ E L    Y+  SDVWS G +L+E+ S  GTPY
Sbjct: 184 WMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPY 219

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%)

Query: 7   SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKY-- 64
           S  + + T +Y SPE +  L + + +D+WS+GC++YE+  + G   Y + + L+ L    
Sbjct: 301 SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL--YTGKLLYDTHDNLEHLHLME 358

Query: 65  ----SFPSDVWSLGC 75
                 PS+ W+  C
Sbjct: 359 KTLGRLPSE-WAGRC 372

Length = 467

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 13/31 (41%), Positives = 23/31 (74%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEM 80
           T +Y SPE +  L + + +D+WS+GC++YE+
Sbjct: 308 TRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338

Length = 467

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 38  GCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
            C  + +  ++ T YY +PE +  + Y    D+WS+GC++ E+V
Sbjct: 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 216

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           + +PE +   K++  SDVWS G V++EV S+   PY+
Sbjct: 175 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 211

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV L     + +  +L LV E  D+ DL   + +    +  L    V S+  Q
Sbjct: 53  KELKHENIVRLHDVIHTEN--KLMLVFEYMDK-DLKKYM-DTHGVRGALDPNTVKSFTYQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   + + H  R+LHR
Sbjct: 109 LLKGIAFCHENRVLHR 124

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 39  CVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF-------SKH 91
                 +     PY+M+PE ++   Y+  +D++SLG  LYE +  + P+           
Sbjct: 56  VAFKTPEQSRPDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILE 115

Query: 92  ISLNGLC 98
           I LNG+ 
Sbjct: 116 ILLNGMP 122

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           + +PE +   K++  SDVWS G V++EV SF   PY+
Sbjct: 176 WTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYW 212

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 135 RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
           +S  +L L++E    GDL   I +  ++     E  V   F QI  AL  VHSR+++HR
Sbjct: 135 KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHR 193

Length = 478

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
           T +HP IV+L  AF      +L++++E    G +  ++ E  +    L E  +    RQ+
Sbjct: 65  TCNHPYIVKLLGAFYWDG--KLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVICRQM 119

Query: 179 AAALQYVHSRRILHR 193
             ALQY+HS +I+HR
Sbjct: 120 LEALQYLHSMKIIHR 134

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 37.1 bits (87), Expect = 0.003
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           GTP Y++PE +    Y    D W+LG ++YE
Sbjct: 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYE 190

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +TS+   F GTP +++PE L E  Y+   D W LG ++YE
Sbjct: 157 RTST---FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYE 193

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPF 87
           T +Y +PE L   K YS   D+WSLGC+  EMV  ++ F
Sbjct: 163 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
           S +GTP Y++PE   +  Y+   D WSLG ++YE+   +G P + S
Sbjct: 195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM--LIGYPPFCS 238

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           S +GTP Y++PE   +  Y    D WSLG +++E
Sbjct: 207 STVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 47  FLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           ++ T +Y +PE L  + KY    D+W++GC++ EM+  + P F
Sbjct: 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE-PLF 201

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.4 bits (86), Expect = 0.003
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+ E L    Y+  SDVWS G +L+E+ S  GTPY
Sbjct: 177 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 212

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE + +  Y+  SDVWS G +L+E+ S   +PY
Sbjct: 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 282

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+PE + +  Y+  SDVWS G +L+E+ S   +PY
Sbjct: 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY 277

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MS 55
           + +PE +   K++  SDVWS G V++EV S+   PY+ MS
Sbjct: 177 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 216

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + ++HPN+V+    F      E+ ++LE  D G L        Q    +A        RQ
Sbjct: 127 RDVNHPNVVKCHDMF--DHNGEIQVLLEFMDGGSLEGTHIADEQFLADVA--------RQ 176

Query: 178 IAAALQYVHSRRILHR 193
           I + + Y+H R I+HR
Sbjct: 177 ILSGIAYLHRRHIVHR 192

Length = 353

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 48  LGTPYYMSPERLK------ELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +G   YM+PER+K         Y+  SDVWSLG  + EM   + P+
Sbjct: 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPY 207

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
             +HPN+V+  ++F    G EL+LV+     G L L I +    +  L E ++ +  +++
Sbjct: 55  QCNHPNVVKYYTSFVV--GDELWLVMPYLSGGSL-LDIMKSSYPRGGLDEAIIATVLKEV 111

Query: 179 AAALQYVHSRRILHR 193
              L+Y+HS   +HR
Sbjct: 112 LKGLEYLHSNGQIHR 126

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 9   DSFLGTPYYMSPERLKELK----YSFPSDVWSLGCVLYEVDSFLG-TPYY 53
           D+ +GTP Y+SPE LK       Y    D WS+G  LYE+   +G TP+Y
Sbjct: 201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM--LVGDTPFY 248

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS 55
           S +GTP Y++PE   +  Y+   D WSLG ++YE+   +G P + S
Sbjct: 195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM--LIGYPPFCS 238

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 14/31 (45%), Positives = 20/31 (64%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           GTP Y++PE +    Y  P D W++G +LYE
Sbjct: 178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYE 208

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIE 102
           +M+PE + +  Y+  SDVWS G +L+E+ +L  SP+    I     C+R++
Sbjct: 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK 296

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 14/37 (37%), Positives = 24/37 (64%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           +M PE +   K++  SD+WS G VL+E+ ++   P+Y
Sbjct: 190 WMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 53  YMSPER----LKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           YM+PER    L +  Y   SDVWSLG  + E+   + P+
Sbjct: 169 YMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPY 207

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY-YMSPERLKEL---------KYSF 66
           + +PE L   +YS  SDVWS G +L+E  S    PY  +S ++ +E              
Sbjct: 162 WTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELC 221

Query: 67  PSDVWSLGCVLYEMVALQSPFFS 89
           P  V+ L    +E    Q P FS
Sbjct: 222 PDAVYRLMERCWEYDPGQRPSFS 244

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           GT    +PE L   KY+  +D+WS G VL+EM+A  S  F
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257

Length = 357

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 122 HPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
           HPN+V+    +  +   +G +L+LVLEL + G +  ++    ++   + E ++     + 
Sbjct: 74  HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEA 133

Query: 179 AAALQYVHSRRILHR 193
              LQ++H  + +HR
Sbjct: 134 LMGLQHLHVNKTIHR 148

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 37.4 bits (86), Expect = 0.004
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 46  SFLGTPY-----YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           SF+ TPY     Y +PE +  + Y    D+WS+GC++ EMV      F     ++   K 
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKV 230

Query: 101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
           IE  L  P P  +     T+   N VE R  +A  +  +LF
Sbjct: 231 IEQ-LGTPCPEFMKKLQPTVR--NYVENRPKYAGLTFPKLF 268

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 31  PSDVW--SLGCVLYEVD-------SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
           P DV     G   + VD        + GT    +PE L    Y    D+WS G VL+EM 
Sbjct: 218 PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA 277

Query: 82  ALQSPFFSKHISLNGLC 98
                 F K   L+G C
Sbjct: 278 TCHDSLFEKD-GLDGDC 293

Length = 391

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 9/77 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELAD-QGDLALVIAECRQKKCHLAECLVWSYFR 176
           + ++HP+I++L+  F        F  L L   + DL   +A  R     +A C + +  R
Sbjct: 138 RAINHPSIIQLKGTFTYNK----FTCLILPRYKTDLYCYLAAKRN----IAICDILAIER 189

Query: 177 QIAAALQYVHSRRILHR 193
            +  A+QY+H  RI+HR
Sbjct: 190 SVLRAIQYLHENRIIHR 206

Length = 391

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           +M+ E L    Y+  SDVWS G +L+E+ S  GTPY
Sbjct: 189 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 224

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           ++ T +Y SPE L    Y    D+WS+GC+L E+   Q P F     ++ L   I+  L 
Sbjct: 161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ-PLFPGESEIDQLFT-IQKVL- 217

Query: 107 PPLPS---GVLYSDKTLH--------HPNIVELR 129
            PLP+    + YS+   H        HP  +E R
Sbjct: 218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERR 251

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             + H NI+ L   +    G  + LV+++    DL  V+     +K  L E  V     Q
Sbjct: 75  NEIKHENIMGLVDVYV--EGDFINLVMDIMA-SDLKKVV----DRKIRLTESQVKCILLQ 127

Query: 178 IAAALQYVHSRRILHR 193
           I   L  +H    +HR
Sbjct: 128 ILNGLNVLHKWYFMHR 143

Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	215
KOG0595|consensus	429		99.95
KOG0591|consensus	375		99.95
KOG0615|consensus	475		99.94
KOG0600|consensus	560		99.94
KOG0581|consensus	364		99.94
KOG0593|consensus	396		99.93
KOG0585|consensus	576		99.93
KOG0592|consensus	604		99.93
KOG0611|consensus	668		99.93
KOG0658|consensus	364		99.93
KOG0661|consensus	538		99.93
KOG0598|consensus	357		99.93
KOG0588|consensus	786		99.92
KOG0603|consensus	612		99.92
KOG0583|consensus	370		99.92
KOG0663|consensus	419		99.92
KOG0580|consensus	281		99.92
KOG0659|consensus	318		99.91
KOG0599|consensus	411		99.91
KOG0594|consensus	323		99.91
KOG0575|consensus	592		99.91
KOG0616|consensus	355		99.9
KOG0198|consensus	313		99.9
KOG0605|consensus	550		99.9
KOG0192|consensus	362		99.9
KOG0610|consensus	459		99.89
KOG0589|consensus	426		99.89
KOG0660|consensus	359		99.89
KOG0666|consensus	438		99.88
KOG0582|consensus	516		99.88
KOG0586|consensus	596		99.87
KOG0669|consensus	376		99.86
KOG0664|consensus	449		99.86
KOG0604|consensus	400		99.86
KOG0197|consensus	468		99.86
KOG0578|consensus	550		99.86
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.86
PTZ00267	478	NIMA-related protein kinase; Provisional	99.86
KOG0033|consensus	355		99.86
KOG0662|consensus	292		99.86
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.85
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.85
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.85
KOG1187|consensus	361		99.85
KOG0597|consensus	808		99.85
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.85
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.85
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.85
KOG0608|consensus	1034		99.85
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.85
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.85
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.85
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.85
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.85
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.85
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.85
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.85
KOG4717|consensus	864		99.84
KOG1989|consensus	738		99.84
KOG4645|consensus	1509		99.84
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.84
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.84
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.84
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.84
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.84
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.84
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.84
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.84
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.84
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.84
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.83
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.83
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.83
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.83
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.83
KOG4250|consensus	732		99.83
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.83
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.83
KOG4721|consensus	904		99.83
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.83
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.83
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.83
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.83
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.83
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.83
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.83
KOG0607|consensus	463		99.82
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.82
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.82
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.82
KOG0194|consensus	474		99.82
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.82
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.82
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.82
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.82
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.82
KOG0612|consensus	1317		99.82
KOG0032|consensus	382		99.82
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.82
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.82
KOG0694|consensus	694		99.82
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.82
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.81
PHA03212	391	serine/threonine kinase US3; Provisional	99.81
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.81
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.81
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.81
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.81
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.81
KOG0665|consensus	369		99.81
KOG0577|consensus	948		99.81
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.8
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.8
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.8
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.8
KOG0668|consensus	338		99.8
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.8
PTZ00283	496	serine/threonine protein kinase; Provisional	99.8
KOG0984|consensus	282		99.8
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.8
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.8
PTZ00036	440	glycogen synthase kinase; Provisional	99.8
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.79
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.79
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.79
PHA03207	392	serine/threonine kinase US3; Provisional	99.79
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.79
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.79
KOG1152|consensus	772		99.79
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.79
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.79
PHA03209	357	serine/threonine kinase US3; Provisional	99.79
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.79
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.79
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.79
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.79
PHA02988	283	hypothetical protein; Provisional	99.78
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.78
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.78
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.78
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.78
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.78
KOG0584|consensus	632		99.78
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.78
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.78
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.78
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.78
PHA03211	461	serine/threonine kinase US3; Provisional	99.78
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.78
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.78
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.78
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.78
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.78
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.78
KOG0579|consensus	1187		99.78
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.78
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.78
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.78
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.78
KOG0574|consensus	502		99.77
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.77
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.77
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.77
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.77
KOG2345|consensus	302		99.77
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.77
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.77
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.77
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.77
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.77
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.77
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.77
KOG1026|consensus	774		99.77
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.77
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.77
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.77
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.77
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.77
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.77
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.77
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.77
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.77
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.77
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.76
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.76
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.76
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.76
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.76
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.76
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.76
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.76
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.76
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.76
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.76
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.76
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.76
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.76
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.76
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
KOG0614|consensus	732		99.76
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.76
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.76
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.76
KOG1094|consensus	807		99.76
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.76
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.76
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.76
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.76
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.76
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.76
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.76
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.76
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.76
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.76
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.76
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.76
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.76
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.75
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.75
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.75
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.75
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.75
KOG0690|consensus	516		99.75
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.75
KOG0193|consensus	678		99.75
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.75
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.75
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.75
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.75
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.75
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.75
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.75
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.75
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.75
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.75
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.75
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.75
PHA03210	501	serine/threonine kinase US3; Provisional	99.75
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.75
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.75
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.75
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.75
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.75
KOG4279|consensus	1226		99.75
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.75
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.75
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.75
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.75
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.75
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.75
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.75
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.75
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.74
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.74
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.74
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.74
KOG0201|consensus	467		99.74
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.74
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.74
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.74
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.74
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.74
KOG4236|consensus	888		99.74
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.74
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.74
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.74
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.74
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.74
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.74
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.74
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.74
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.74
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.74
KOG0590|consensus	601		99.74
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.74
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.74
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.74
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.74
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.73
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.73
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.73
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.73
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.73
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.73
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.73
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.73
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.73
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.73
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.73
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.73
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.73
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.73
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.72
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.72
KOG0986|consensus	591		99.72
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.72
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.72
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.72
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.72
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.72
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.72
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.71
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.71
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.71
KOG0983|consensus	391		99.71
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.71
KOG0667|consensus	586		99.71
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.71
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.71
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.71
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.71
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.71
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.71
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.71
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.71
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.71
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.71
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.71
KOG1345|consensus	378		99.71
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.71
KOG0696|consensus	683		99.7
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.7
PRK10345	210	hypothetical protein; Provisional	99.7
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.7
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.7
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.7
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.7
KOG1095|consensus	1025		99.7
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.7
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.7
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.69
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.69
KOG0695|consensus	593		99.69
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.69
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.69
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.69
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.69
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.69
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.69
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.69
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.68
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.68
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.68
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.68
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.68
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.68
PLN00181	793	protein SPA1-RELATED; Provisional	99.68
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.68
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.68
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.68
PTZ00284	467	protein kinase; Provisional	99.68
PRK09188	365	serine/threonine protein kinase; Provisional	99.68
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.68
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.68
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.68
KOG1027|consensus	903		99.67
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.67
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.67
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.67
PLN00009	294	cyclin-dependent kinase A; Provisional	99.67
KOG1006|consensus	361		99.67
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.67
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.67
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.67
KOG1035|consensus	1351		99.66
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.66
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.66
KOG0587|consensus	953		99.65
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.65
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.65
KOG4278|consensus	1157		99.65
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.65
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.65
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.65
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.65
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.65
PHA02882	294	putative serine/threonine kinase; Provisional	99.65
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.65
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.65
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.64
KOG4257|consensus	974		99.64
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.64
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.64
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.64
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.63
KOG0199|consensus	1039		99.63
KOG1151|consensus	775		99.63
KOG0196|consensus	996		99.62
PRK12274	218	serine/threonine protein kinase; Provisional	99.61
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.6
KOG0576|consensus	829		99.59
KOG1025|consensus	1177		99.59
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.57
KOG3653|consensus	534		99.56
KOG0596|consensus	677		99.55
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.55
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.53
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.51
smart00090	237	RIO RIO-like kinase.	99.51
KOG1167|consensus	418		99.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.5
KOG0200|consensus	609		99.49
KOG0591|consensus	375		99.49
KOG2052|consensus	513		99.48
PRK14879	211	serine/threonine protein kinase; Provisional	99.47
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.46
KOG4158|consensus	598		99.44
KOG0581|consensus	364		99.44
KOG0670|consensus	752		99.41
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.41
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.41
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.37
KOG0578|consensus	550		99.35
KOG1290|consensus	590		99.35
KOG0033|consensus	355		99.34
KOG0201|consensus	467		99.32
KOG1164|consensus	322		99.32
KOG0598|consensus	357		99.3
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.29
KOG1163|consensus	341		99.29
KOG0616|consensus	355		99.25
KOG1240|consensus	1431		99.23
KOG0577|consensus	948		99.23
KOG0615|consensus	475		99.22
KOG0597|consensus	808		99.2
KOG0671|consensus	415		99.19
KOG0579|consensus	1187		99.15
KOG1166|consensus	974		99.13
KOG0603|consensus	612		99.13
KOG0694|consensus	694		99.13
KOG1165|consensus	449		99.13
KOG0575|consensus	592		99.1
KOG0576|consensus	829		99.1
KOG0605|consensus	550		99.09
KOG0589|consensus	426		99.07
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.06
KOG0696|consensus	683		99.06
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.05
KOG0604|consensus	400		99.04
KOG0690|consensus	516		99.03
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.03
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.03
KOG0032|consensus	382		98.99
KOG0592|consensus	604		98.95
KOG0595|consensus	429		98.93
KOG0583|consensus	370		98.91
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.91
KOG0667|consensus	586		98.9
KOG1024|consensus	563		98.9
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.9
KOG0590|consensus	601		98.89
KOG1023|consensus	484		98.89
KOG0582|consensus	516		98.88
KOG0588|consensus	786		98.88
KOG0614|consensus	732		98.88
KOG0599|consensus	411		98.86
KOG0660|consensus	359		98.86
KOG0574|consensus	502		98.85
KOG0596|consensus	677		98.85
KOG0610|consensus	459		98.84
KOG0198|consensus	313		98.83
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.81
KOG0580|consensus	281		98.8
KOG1033|consensus	516		98.79
KOG0601|consensus	524		98.78
KOG1266|consensus	458		98.78
KOG0695|consensus	593		98.77
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.76
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.74
KOG0659|consensus	318		98.73
KOG4279|consensus	1226		98.73
PTZ00284	467	protein kinase; Provisional	98.73
KOG0986|consensus	591		98.69
KOG0658|consensus	364		98.68
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.65
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.64
KOG4645|consensus	1509		98.62
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.6
KOG0192|consensus	362		98.59
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.58
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.58
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.57
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.57
KOG0593|consensus	396		98.56
KOG0983|consensus	391		98.55
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.55
KOG0584|consensus	632		98.54
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.54
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.53
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.52
KOG0607|consensus	463		98.51
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.51
KOG0600|consensus	560		98.5
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.48

>KOG0595|consensus

Probab=99.95  E-value=5.7e-30  Score=197.46  Aligned_cols=97  Identities=28%  Similarity=0.432  Sum_probs=88.5

Q ss_pred             cccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      ++++++.++|||||.+++....  ++.+++|||||+||||.++|..    +..++|..++.++.||+.|+++||+++|||
T Consensus        59 Ei~iLkel~H~nIV~l~d~~~~--~~~i~lVMEyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~~IiH  132 (429)
T KOG0595|consen   59 EIKILKELKHPNIVRLLDCIED--DDFIYLVMEYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHENNIIH  132 (429)
T ss_pred             HHHHHHhcCCcceeeEEEEEec--CCeEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            3478899999999999999877  5699999999999999999976    346999999999999999999999999999


Q ss_pred             cccchhhhhhhcc------ceeecccccC
Q psy18117        193 RGERETFLSVLGD------CVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~------~~~ki~D~~~  215 (215)
                      |||||+|||++..      -.+||+|||+
T Consensus       133 RDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen  133 RDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             ccCCcceEEeccCCCCCCCceEEecccch
Confidence            9999999999875      3799999985

>KOG0591|consensus

Probab=99.95  E-value=2.5e-28  Score=180.62  Aligned_cols=100  Identities=32%  Similarity=0.505  Sum_probs=91.6

Q ss_pred             cCCccCCCcchhhhhh-hhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh--CC--
Q psy18117        115 YSDKTLHHPNIVELRS-AFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS--RR--  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~-~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~--~~--  189 (215)
                      .++++++|||||++++ .|.+ +.+-+++|||||++|||.+.|+..++++..++|..+|++|.|++.||..||+  .+  
T Consensus        70 ~lLkQL~HpNIVqYy~~~f~~-~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~  148 (375)
T KOG0591|consen   70 SLLKQLNHPNIVQYYAHSFIE-DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGT  148 (375)
T ss_pred             HHHHhcCCchHHHHHHHhhhc-cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccc
Confidence            6789999999999999 5544 3445999999999999999999988888899999999999999999999998  45  


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||||||+||.++.+|++||.|||+
T Consensus       149 VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen  149 VMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             eeeccCcchheEEcCCCceeeccchh
Confidence            89999999999999999999999984

>KOG0615|consensus

Probab=99.94  E-value=3.8e-29  Score=193.16  Aligned_cols=98  Identities=28%  Similarity=0.448  Sum_probs=88.6

Q ss_pred             CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      +++.+++.++||+||++++.|..  .+..|+||||++||+|.+++-..+    .+.|..-+.+|+||+.|+.|||++||+
T Consensus       225 ~EieILkkL~HP~IV~~~d~f~~--~ds~YmVlE~v~GGeLfd~vv~nk----~l~ed~~K~~f~Qll~avkYLH~~GI~  298 (475)
T KOG0615|consen  225 NEIEILKKLSHPNIVRIKDFFEV--PDSSYMVLEYVEGGELFDKVVANK----YLREDLGKLLFKQLLTAVKYLHSQGII  298 (475)
T ss_pred             HHHHHHHhcCCCCEEEEeeeeec--CCceEEEEEEecCccHHHHHHhcc----ccccchhHHHHHHHHHHHHHHHHcCcc
Confidence            34578899999999999999987  457899999999999999986633    588999999999999999999999999


Q ss_pred             ccccchhhhhhhcc---ceeecccccC
Q psy18117        192 HRGERETFLSVLGD---CVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~---~~~ki~D~~~  215 (215)
                      ||||||+|||+..+   ..+||+|||+
T Consensus       299 HRDiKPeNILl~~~~e~~llKItDFGl  325 (475)
T KOG0615|consen  299 HRDIKPENILLSNDAEDCLLKITDFGL  325 (475)
T ss_pred             cccCCcceEEeccCCcceEEEecccch
Confidence            99999999999766   7999999984

>KOG0600|consensus

Probab=99.94  E-value=8.1e-29  Score=195.53  Aligned_cols=100  Identities=25%  Similarity=0.438  Sum_probs=91.1

Q ss_pred             CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++.+++.+.||||++|.+.........+|+|+||+++ ||..++..   ....|++.+++.||.||++||+|||++||+
T Consensus       165 REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~~gvl  240 (560)
T KOG0600|consen  165 REIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHSRGVL  240 (560)
T ss_pred             HHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhhcCee
Confidence            34588999999999999999887656789999999999 99999854   345699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||.+|||||.+|++||+|||+
T Consensus       241 HRDIK~SNiLidn~G~LKiaDFGL  264 (560)
T KOG0600|consen  241 HRDIKGSNILIDNNGVLKIADFGL  264 (560)
T ss_pred             eccccccceEEcCCCCEEeccccc
Confidence            999999999999999999999995

>KOG0581|consensus

Probab=99.94  E-value=6.7e-28  Score=184.19  Aligned_cols=96  Identities=23%  Similarity=0.328  Sum_probs=86.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      .++...+||+||.++++|..... .+.++||||++|+|++++...    +.++|...-.++.++++||.|||. ++||||
T Consensus       129 ~il~~~~spyIV~~ygaF~~~~~-~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHR  203 (364)
T KOG0581|consen  129 EILRSCQSPYIVGFYGAFYSNGE-EISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEERKIIHR  203 (364)
T ss_pred             HHHhhCCCCCeeeEeEEEEeCCc-eEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhccCeeec
Confidence            66777899999999999987422 599999999999999998653    359999999999999999999995 999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||||++.|.+||||||.
T Consensus       204 DIKPsNlLvNskGeVKicDFGV  225 (364)
T KOG0581|consen  204 DIKPSNLLVNSKGEVKICDFGV  225 (364)
T ss_pred             cCCHHHeeeccCCCEEeccccc
Confidence            9999999999999999999983

>KOG0593|consensus

Probab=99.93  E-value=3.7e-28  Score=181.39  Aligned_cols=96  Identities=22%  Similarity=0.332  Sum_probs=88.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +..+++++|+|+|.|.++|.+  ..++++|+|||+. ++.+.++..+.   .+++..++++++|++.|+.|||+++||||
T Consensus        52 IrmLKqLkH~NLVnLiEVFrr--krklhLVFE~~dh-TvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~n~IHR  125 (396)
T KOG0593|consen   52 IRMLKQLKHENLVNLIEVFRR--KRKLHLVFEYCDH-TVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKNNCIHR  125 (396)
T ss_pred             HHHHHhcccchHHHHHHHHHh--cceeEEEeeecch-HHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhcCeecc
Confidence            367889999999999999987  5789999999999 88887876554   48999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.+|++||||||+
T Consensus       126 DIKPENILit~~gvvKLCDFGF  147 (396)
T KOG0593|consen  126 DIKPENILITQNGVVKLCDFGF  147 (396)
T ss_pred             cCChhheEEecCCcEEeccchh
Confidence            9999999999999999999985

>KOG0585|consensus

Probab=99.93  E-value=2.5e-28  Score=191.67  Aligned_cols=98  Identities=29%  Similarity=0.469  Sum_probs=88.9

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++|||||+|+++..++..+.+|+|+|||+.|.+...-    ..+.-+++.+++.|+++++.||+|||.+|||||
T Consensus       159 IailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHR  234 (576)
T KOG0585|consen  159 IAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHR  234 (576)
T ss_pred             HHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence            4788999999999999999999889999999999999887642    222238999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|+|++++|++||+|||.
T Consensus       235 DIKPsNLLl~~~g~VKIsDFGV  256 (576)
T KOG0585|consen  235 DIKPSNLLLSSDGTVKISDFGV  256 (576)
T ss_pred             ccchhheEEcCCCcEEeeccce
Confidence            9999999999999999999983

>KOG0592|consensus

Probab=99.93  E-value=8.1e-28  Score=191.36  Aligned_cols=93  Identities=30%  Similarity=0.422  Sum_probs=86.1

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+..+ .||.|++|+-.|.+  +..+|+|+||+++|+|.++|+..    +.|++..++.|+.||+.||+|||++||||||
T Consensus       126 ~l~~L~~hPgivkLy~TFQD--~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~GIIHRD  199 (604)
T KOG0592|consen  126 ALTQLSGHPGIVKLYFTFQD--EESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSNGIIHRD  199 (604)
T ss_pred             HHHHhhCCCCeEEEEEEeec--ccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            34444 89999999999987  67999999999999999999764    4699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||+|+++++||+|||
T Consensus       200 lKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  200 LKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             CChhheeEcCCCcEEEeecc
Confidence            99999999999999999998

>KOG0611|consensus

Probab=99.93  E-value=9.7e-28  Score=185.72  Aligned_cols=96  Identities=25%  Similarity=0.419  Sum_probs=90.2

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.++..++||||+.++++|..  .+.+.+||||+.+|+|+++|..+    +.++|.+++.+|+||++|+.|||.++|+||
T Consensus       104 IeIMSsLNHPhII~IyEVFEN--kdKIvivMEYaS~GeLYDYiSer----~~LsErEaRhfFRQIvSAVhYCHknrVvHR  177 (668)
T KOG0611|consen  104 IEIMSSLNHPHIIQIYEVFEN--KDKIVIVMEYASGGELYDYISER----GSLSEREARHFFRQIVSAVHYCHKNRVVHR  177 (668)
T ss_pred             HHHHhhcCCCceeehhhhhcC--CceEEEEEEecCCccHHHHHHHh----ccccHHHHHHHHHHHHHHHHHHhhccceec
Confidence            378899999999999999987  56899999999999999999774    469999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||-+|||+|.++++||+|||+
T Consensus       178 DLKLENILLD~N~NiKIADFGL  199 (668)
T KOG0611|consen  178 DLKLENILLDQNNNIKIADFGL  199 (668)
T ss_pred             ccchhheeecCCCCeeeeccch
Confidence            9999999999999999999985

>KOG0658|consensus

Probab=99.93  E-value=4.9e-27  Score=179.15  Aligned_cols=104  Identities=30%  Similarity=0.304  Sum_probs=91.5

Q ss_pred             CCCcccCCccCCCcchhhhhhhhcCCchh---HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q psy18117        110 PSGVLYSDKTLHHPNIVELRSAFASRSGQ---ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH  186 (215)
Q Consensus       110 ~~~~~~~~~~l~h~~iv~l~~~~~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH  186 (215)
                      ...++.++..+.|||||+|.-.|....+.   ...+||||++. +|.+.++.....+..++...++-|++||++||.|||
T Consensus        64 knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh  142 (364)
T KOG0658|consen   64 KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH  142 (364)
T ss_pred             CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH
Confidence            33445777899999999999888765444   45689999999 999999877666778999999999999999999999


Q ss_pred             hCCccccccchhhhhhhcc-ceeeccccc
Q psy18117        187 SRRILHRGERETFLSVLGD-CVRTVSEQA  214 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~-~~~ki~D~~  214 (215)
                      +.||+||||||+|||+|.+ |.+||||||
T Consensus       143 ~~~IcHRDIKPqNlLvD~~tg~LKicDFG  171 (364)
T KOG0658|consen  143 SHGICHRDIKPQNLLVDPDTGVLKICDFG  171 (364)
T ss_pred             hcCcccCCCChheEEEcCCCCeEEeccCC
Confidence            9999999999999999977 899999998

>KOG0661|consensus

Probab=99.93  E-value=3.3e-27  Score=185.30  Aligned_cols=96  Identities=22%  Similarity=0.370  Sum_probs=87.9

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ..++.++ ||||++|.+++.+.+ +.+++||||++. +|+++++.+   +..+++..++.|+.||++||+|+|.+|+.||
T Consensus        60 ksL~kln~hpniikL~Evi~d~~-~~L~fVfE~Md~-NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~GfFHR  134 (538)
T KOG0661|consen   60 KSLRKLNPHPNIIKLKEVIRDND-RILYFVFEFMDC-NLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHGFFHR  134 (538)
T ss_pred             HHHHhcCCCCcchhhHHHhhccC-ceEeeeHHhhhh-hHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            5566777 999999999998753 389999999999 999999875   4479999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+|||+....++||+|||+
T Consensus       135 DlKPENiLi~~~~~iKiaDFGL  156 (538)
T KOG0661|consen  135 DLKPENILISGNDVIKIADFGL  156 (538)
T ss_pred             cCChhheEecccceeEeccccc
Confidence            9999999999999999999985

>KOG0598|consensus

Probab=99.93  E-value=1.4e-27  Score=182.25  Aligned_cols=95  Identities=23%  Similarity=0.342  Sum_probs=89.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||+||+++-.|++  .+++|+|+||+.||+|...|+.    .+.++|..++-|+..|+.||.|||++||||||
T Consensus        77 ~IL~~v~hPFiv~l~ysFQt--~~kLylVld~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRD  150 (357)
T KOG0598|consen   77 NILSKIKHPFIVKLIYSFQT--EEKLYLVLDYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSKGIIYRD  150 (357)
T ss_pred             HHHHhCCCCcEeeeEEeccc--CCeEEEEEeccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            67778999999999999987  6799999999999999999965    44799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+|.+|+++|+|||+
T Consensus       151 lKPENILLd~~GHi~LtDFgL  171 (357)
T KOG0598|consen  151 LKPENILLDEQGHIKLTDFGL  171 (357)
T ss_pred             CCHHHeeecCCCcEEEecccc
Confidence            999999999999999999985

>KOG0588|consensus

Probab=99.92  E-value=1.1e-27  Score=194.53  Aligned_cols=97  Identities=27%  Similarity=0.356  Sum_probs=90.7

Q ss_pred             cccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      ++.+++.+.|||+..|++++..  ..++|+|+||+++|.|++++..    ++.++|.++..+|+||+.|+.|||..+|+|
T Consensus        62 EIviMkLi~HpnVl~LydVwe~--~~~lylvlEyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~~icH  135 (786)
T KOG0588|consen   62 EIVIMKLIEHPNVLRLYDVWEN--KQHLYLVLEYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAFNICH  135 (786)
T ss_pred             hhHHHHHhcCCCeeeeeeeecc--CceEEEEEEecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhhccee
Confidence            3478899999999999999987  5789999999999999999965    557999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||+|+|+|..+++||+|||+
T Consensus       136 RDLKpENlLLd~~~nIKIADFGM  158 (786)
T KOG0588|consen  136 RDLKPENLLLDVKNNIKIADFGM  158 (786)
T ss_pred             ccCCchhhhhhcccCEeeeccce
Confidence            99999999999999999999995

>KOG0603|consensus

Probab=99.92  E-value=4.8e-26  Score=184.42  Aligned_cols=90  Identities=22%  Similarity=0.331  Sum_probs=79.3

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      .-.|||++++.+++.+  +.+.++|||.+.+|.+.+.|...+     ....++..|++||+.|+.|||++||||||+||+
T Consensus       372 ~~~h~niv~~~~v~~~--~~~~~~v~e~l~g~ell~ri~~~~-----~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~  444 (612)
T KOG0603|consen  372 VRDHPNIVKSHDVYED--GKEIYLVMELLDGGELLRRIRSKP-----EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPG  444 (612)
T ss_pred             hcCCCcceeecceecC--CceeeeeehhccccHHHHHHHhcc-----hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChh
Confidence            5579999999999987  679999999999999888875422     233788899999999999999999999999999


Q ss_pred             hhhh-hccceeecccccC
Q psy18117        199 FLSV-LGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~-~~~~~~ki~D~~~  215 (215)
                      |||+ ++.|+++|+|||.
T Consensus       445 NIL~~~~~g~lrltyFG~  462 (612)
T KOG0603|consen  445 NILLDGSAGHLRLTYFGF  462 (612)
T ss_pred             heeecCCCCcEEEEEech
Confidence            9999 5889999999984

>KOG0583|consensus

Probab=99.92  E-value=4.9e-27  Score=187.06  Aligned_cols=95  Identities=33%  Similarity=0.485  Sum_probs=87.5

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+.+.++ ||||+++++++...  ..+++|||||.+|+|.++|..    ++.+.|..++.+|+||+.|++|||++||+||
T Consensus        71 ~~~~~~~~HpnI~~l~ev~~t~--~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR  144 (370)
T KOG0583|consen   71 SILRRLRSHPNIIRLLEVFATP--TKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRGIVHR  144 (370)
T ss_pred             HHHHHhccCCCEeEEEEEEecC--CeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence            5667777 99999999999874  459999999999999999965    4469999999999999999999999999999


Q ss_pred             ccchhhhhhhcc-ceeecccccC
Q psy18117        194 GERETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~-~~~ki~D~~~  215 (215)
                      ||||+|||++.+ +++||+|||.
T Consensus       145 DLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen  145 DLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             CCCHHHEEecCCCCCEEEecccc
Confidence            999999999999 9999999984

>KOG0663|consensus

Probab=99.92  E-value=4.3e-27  Score=177.71  Aligned_cols=108  Identities=19%  Similarity=0.283  Sum_probs=95.1

Q ss_pred             hcCCCCCCCcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      .++|-..-.++.++...+|||||++.++....+-+.+|+|||||++ ||..+|...+   .++.+.+++-++.|++.|++
T Consensus       116 ~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~---q~F~~~evK~L~~QlL~glk  191 (419)
T KOG0663|consen  116 EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMK---QPFLPGEVKTLMLQLLRGLK  191 (419)
T ss_pred             CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhcc---CCCchHHHHHHHHHHHHHHH
Confidence            3444443344567788899999999999887767789999999999 9999998755   36999999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.|+||||||+|+|++..|.+||+|||+
T Consensus       192 ~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGL  223 (419)
T KOG0663|consen  192 HLHDNWILHRDLKTSNLLLSHKGILKIADFGL  223 (419)
T ss_pred             HHhhceeEecccchhheeeccCCcEEecccch
Confidence            99999999999999999999999999999985

>KOG0580|consensus

Probab=99.92  E-value=2.5e-26  Score=166.27  Aligned_cols=101  Identities=28%  Similarity=0.426  Sum_probs=92.0

Q ss_pred             CCCCcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        109 LPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       109 ~~~~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ++++ +.+...++||||.+++..|.+  ..++|+++||+..|+|...|...+  ...+++..++.|..|++.|+.|||.+
T Consensus        69 lrRE-iEIqs~L~hpnilrlY~~fhd--~~riyLilEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k  143 (281)
T KOG0580|consen   69 LRRE-IEIQSHLRHPNILRLYGYFHD--SKRIYLILEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLK  143 (281)
T ss_pred             hhhe-eEeecccCCccHHhhhhheec--cceeEEEEEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccC
Confidence            3444 489999999999999999987  679999999999999999997533  33599999999999999999999999


Q ss_pred             Cccccccchhhhhhhccceeeccccc
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      +||||||||+|+|++..|.+||+|||
T Consensus       144 ~VIhRdiKpenlLlg~~~~lkiAdfG  169 (281)
T KOG0580|consen  144 RVIHRDIKPENLLLGSAGELKIADFG  169 (281)
T ss_pred             CcccCCCCHHHhccCCCCCeeccCCC
Confidence            99999999999999999999999998

>KOG0659|consensus

Probab=99.91  E-value=5.1e-26  Score=167.03  Aligned_cols=96  Identities=31%  Similarity=0.427  Sum_probs=88.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +..++.++|+||++|.++|..  ...+.+|+||++. ||...|+.   +...++..+++.|+.|++.|+.|||++.|+||
T Consensus        52 IK~Lqel~h~nIi~LiD~F~~--~~~l~lVfEfm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHR  125 (318)
T KOG0659|consen   52 IKLLQELKHPNIIELIDVFPH--KSNLSLVFEFMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHSKWILHR  125 (318)
T ss_pred             HHHHHHccCcchhhhhhhccC--CCceEEEEEeccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            467889999999999999976  5689999999999 99999975   34579999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||.|+|++++|.+||+|||.
T Consensus       126 DlKPnNLLis~~g~lKiADFGL  147 (318)
T KOG0659|consen  126 DLKPNNLLISSDGQLKIADFGL  147 (318)
T ss_pred             cCCccceEEcCCCcEEeecccc
Confidence            9999999999999999999984

>KOG0599|consensus

Probab=99.91  E-value=3.1e-25  Score=163.97  Aligned_cols=92  Identities=25%  Similarity=0.430  Sum_probs=85.6

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      +...||+|+++.+.|.+  +..+++|+|.|+.|.|.+++.+    ...++|..++.+++||++|+.|+|.++||||||||
T Consensus        78 qv~GHP~II~l~D~yes--~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKp  151 (411)
T KOG0599|consen   78 QVMGHPYIIDLQDVYES--DAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKP  151 (411)
T ss_pred             HhcCCCcEEEeeeeccC--cchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccCh
Confidence            45579999999999987  5689999999999999999965    45799999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||++++.++||+|||+
T Consensus       152 ENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen  152 ENILLDDNMNIKISDFGF  169 (411)
T ss_pred             hheeeccccceEEeccce
Confidence            999999999999999985

>KOG0594|consensus

Probab=99.91  E-value=3e-26  Score=174.55  Aligned_cols=108  Identities=28%  Similarity=0.389  Sum_probs=91.3

Q ss_pred             CCCCCCcccCCccCCCcc-hhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Q psy18117        107 PPLPSGVLYSDKTLHHPN-IVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~-iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~  181 (215)
                      |.....++.+++.++|+| |+.|.+++.+.+.    ..+++|+||++. ||..++...+.....++...++.+++||+.|
T Consensus        54 P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g  132 (323)
T KOG0594|consen   54 PSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG  132 (323)
T ss_pred             CchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHH
Confidence            333334457889999999 9999999976321    268899999999 9999998765322347778999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++|||+++|+||||||+|||++++|.+||+|||.
T Consensus       133 l~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGl  166 (323)
T KOG0594|consen  133 LAFLHSHGILHRDLKPQNLLISSSGVLKLADFGL  166 (323)
T ss_pred             HHHHHhCCeecccCCcceEEECCCCcEeeeccch
Confidence            9999999999999999999999999999999984

>KOG0575|consensus

Probab=99.91  E-value=7.6e-26  Score=182.33  Aligned_cols=96  Identities=27%  Similarity=0.440  Sum_probs=90.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+.+.+.|||||++++.|++  .+.+|+|+|+|+.|+|..+++.    +..++|.+++.|++||+.|+.|||+++||||
T Consensus        69 IeIHr~L~HpnIV~f~~~FED--s~nVYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH~~~IiHR  142 (592)
T KOG0575|consen   69 IEIHRSLKHPNIVQFYHFFED--SNNVYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLHSLGIIHR  142 (592)
T ss_pred             HHHHHhcCCCcEEeeeeEeec--CCceEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHHhcCceec
Confidence            478899999999999999988  5799999999999999999864    4479999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||-.|++++++.+|||+|||+
T Consensus       143 DLKLGNlfL~~~~~VKIgDFGL  164 (592)
T KOG0575|consen  143 DLKLGNLFLNENMNVKIGDFGL  164 (592)
T ss_pred             ccchhheeecCcCcEEecccce
Confidence            9999999999999999999985

>KOG0616|consensus

Probab=99.90  E-value=1.4e-25  Score=166.94  Aligned_cols=95  Identities=23%  Similarity=0.320  Sum_probs=88.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.+.||++++++..|.+  .+.+++||||.+||.|..+++..    +.+++..++-|+.|++.||+|||+++|++||
T Consensus        96 ~vL~~v~~PFlv~l~~t~~d--~~~lymvmeyv~GGElFS~Lrk~----~rF~e~~arFYAAeivlAleylH~~~iiYRD  169 (355)
T KOG0616|consen   96 RVLKAVSHPFLVKLYGTFKD--NSNLYMVMEYVPGGELFSYLRKS----GRFSEPHARFYAAEIVLALEYLHSLDIIYRD  169 (355)
T ss_pred             HHHhhccCceeEEEEEeecc--CCeEEEEEeccCCccHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHHhcCeeecc
Confidence            56778889999999998876  67899999999999999999663    3699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|||+|.+|.+||+|||+
T Consensus       170 LKPENiLlD~~G~iKitDFGF  190 (355)
T KOG0616|consen  170 LKPENLLLDQNGHIKITDFGF  190 (355)
T ss_pred             CChHHeeeccCCcEEEEeccc
Confidence            999999999999999999985

>KOG0198|consensus

Probab=99.90  E-value=2.7e-25  Score=171.37  Aligned_cols=98  Identities=29%  Similarity=0.353  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||||++++......+..+++.|||+++|+|.+++...+.   .++|..++.+.+|+++||.|||++||||||
T Consensus        66 ~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~g~vH~D  142 (313)
T KOG0198|consen   66 RILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSKGIVHCD  142 (313)
T ss_pred             HHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            56778889999999986444222268899999999999999976332   599999999999999999999999999999


Q ss_pred             cchhhhhhhc-cceeecccccC
Q psy18117        195 ERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      |||+|||++. ++.+||+|||+
T Consensus       143 iK~~NiLl~~~~~~~KlaDFG~  164 (313)
T KOG0198|consen  143 IKPANILLDPSNGDVKLADFGL  164 (313)
T ss_pred             cccceEEEeCCCCeEEeccCcc
Confidence            9999999999 69999999984

>KOG0605|consensus

Probab=99.90  E-value=2.6e-25  Score=176.91  Aligned_cols=95  Identities=20%  Similarity=0.261  Sum_probs=88.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++....+|+||+|+-.|.+  .+.+||||||.+|||+..+|..    .+.|+|..++.|+.+++.|++-+|+.|+||||
T Consensus       193 diL~~~ds~~vVKLyYsFQD--~~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRD  266 (550)
T KOG0605|consen  193 DILAEVDSPWVVKLYYSFQD--KEYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQLGYIHRD  266 (550)
T ss_pred             HHhhhcCCCcEEEEEEEecC--CCeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHcCccccc
Confidence            45556889999999999987  6799999999999999999954    55799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|+|||..|++||+|||+
T Consensus       267 IKPdNlLiD~~GHiKLSDFGL  287 (550)
T KOG0605|consen  267 IKPDNLLIDAKGHIKLSDFGL  287 (550)
T ss_pred             CChhheeecCCCCEeeccccc
Confidence            999999999999999999995

>KOG0192|consensus

Probab=99.90  E-value=3.5e-25  Score=175.23  Aligned_cols=98  Identities=24%  Similarity=0.298  Sum_probs=88.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC-cccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR-ILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~Hr  193 (215)
                      .++..++||||+++++++..+. ....+||||+++|+|.+++...  .+..++...+..++.||++|++|||+++ ||||
T Consensus        91 ~il~~l~HpNIV~f~G~~~~~~-~~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHr  167 (362)
T KOG0192|consen   91 SLLSRLRHPNIVQFYGACTSPP-GSLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHR  167 (362)
T ss_pred             HHHHhCCCCCeeeEEEEEcCCC-CceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeec
Confidence            6677899999999999998742 2689999999999999999763  3457999999999999999999999999 9999


Q ss_pred             ccchhhhhhhccc-eeecccccC
Q psy18117        194 GERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||||+|||++.++ ++||||||.
T Consensus       168 DLK~~NiLv~~~~~~~KI~DFGl  190 (362)
T KOG0192|consen  168 DLKSDNILVDLKGKTLKIADFGL  190 (362)
T ss_pred             ccChhhEEEcCCCCEEEECCCcc
Confidence            9999999999998 999999984

>KOG0610|consensus

Probab=99.89  E-value=2.4e-25  Score=172.31  Aligned_cols=96  Identities=23%  Similarity=0.240  Sum_probs=89.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..+.||++..|+..|..  ++..+++||||+||||+.+++..+  ...+++..++-|+..++-||+|||-.|||.||
T Consensus       129 eIL~~lDHPFlPTLYa~fet--~~~~cl~meyCpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHmlGivYRD  204 (459)
T KOG0610|consen  129 EILSLLDHPFLPTLYASFET--DKYSCLVMEYCPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHMLGIVYRD  204 (459)
T ss_pred             HHHHhcCCCccchhhheeec--cceeEEEEecCCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhhceeecc
Confidence            67889999999999999987  578999999999999999998754  34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||||-++|++.|+||-
T Consensus       205 LKPENILvredGHIMLsDFD  224 (459)
T KOG0610|consen  205 LKPENILVREDGHIMLSDFD  224 (459)
T ss_pred             CCcceeEEecCCcEEeeecc
Confidence            99999999999999999984

>KOG0589|consensus

Probab=99.89  E-value=2.5e-25  Score=176.21  Aligned_cols=97  Identities=31%  Similarity=0.441  Sum_probs=88.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhH-HHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQE-LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~-~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+.+.++|||||.+.+.|..  ++. +++||+||+||||.+.|...  ++..++|..++.||.|++.|++|||+++|+||
T Consensus        55 ~lis~~~hP~iv~y~ds~~~--~~~~l~Ivm~Y~eGg~l~~~i~~~--k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHR  130 (426)
T KOG0589|consen   55 DLLSKLLHPNIVEYKDSFEE--DGQLLCIVMEYCEGGDLAQLIKEQ--KGVLFPEERILKWFVQILLAVNYLHENRVLHR  130 (426)
T ss_pred             HHHHhccCCCeeeeccchhc--CCceEEEEEeecCCCCHHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            45667999999999999987  345 89999999999999999773  35679999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++||+++.++.+||.|||.
T Consensus       131 DlK~~Nifltk~~~VkLgDfGl  152 (426)
T KOG0589|consen  131 DLKCANIFLTKDKKVKLGDFGL  152 (426)
T ss_pred             cchhhhhhccccCceeecchhh
Confidence            9999999999999999999984

>KOG0660|consensus

Probab=99.89  E-value=6e-25  Score=167.51  Aligned_cols=97  Identities=27%  Similarity=0.427  Sum_probs=87.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCC---chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      +.+++.++|+||+.+.+++..+   +-+++|+|+|+++. ||.+.|+.    +..+++..+..++.||+.||.|+|+.+|
T Consensus        72 lklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMet-DL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSAnV  146 (359)
T KOG0660|consen   72 LKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMET-DLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSANV  146 (359)
T ss_pred             HHHHHHhcCCCcceEEeecccccccccceeEEehhHHhh-HHHHHHHc----CccccHHHHHHHHHHHHHhcchhhcccc
Confidence            3678889999999999998762   24579999999988 99999965    3359999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||+||+|+|++.++.+||||||+
T Consensus       147 iHRDLKPsNll~n~~c~lKI~DFGL  171 (359)
T KOG0660|consen  147 IHRDLKPSNLLLNADCDLKICDFGL  171 (359)
T ss_pred             cccccchhheeeccCCCEEeccccc
Confidence            9999999999999999999999985

>KOG0666|consensus

Probab=99.88  E-value=1.2e-24  Score=163.32  Aligned_cols=102  Identities=26%  Similarity=0.430  Sum_probs=90.5

Q ss_pred             CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-KCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .++.+.+.++|||++.|..+|... +..+++++||++. ||...|...... ...++...++.++.||+.|+.|||++-|
T Consensus        76 REiaL~REl~h~nvi~Lv~Vfl~~-d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWv  153 (438)
T KOG0666|consen   76 REIALLRELKHPNVISLVKVFLSH-DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWV  153 (438)
T ss_pred             HHHHHHHHhcCCcchhHHHHHhcc-CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhe
Confidence            344677899999999999999875 5789999999999 999999865422 2368999999999999999999999999


Q ss_pred             cccccchhhhhhhcc----ceeecccccC
Q psy18117        191 LHRGERETFLSVLGD----CVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~----~~~ki~D~~~  215 (215)
                      +||||||+||||+.+    |.|||+|+|+
T Consensus       154 lHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  154 LHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             eeccCCcceEEEeccCCccCeeEeecccH
Confidence            999999999999988    8999999984

>KOG0582|consensus

Probab=99.88  E-value=9.8e-24  Score=164.86  Aligned_cols=96  Identities=23%  Similarity=0.372  Sum_probs=88.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||++++..|..  ++.+++||.|+.+|++.++|+..-.  ..++|..+.-+++++++||.|||++|-||||
T Consensus        76 ~~msl~~HPNIv~~~~sFvv--~~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRd  151 (516)
T KOG0582|consen   76 QTMSLIDHPNIVTYHCSFVV--DSELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQNGHIHRD  151 (516)
T ss_pred             HHhhhcCCCCcceEEEEEEe--cceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence            56778999999999999987  6799999999999999999987543  3499999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||+.||||+++|.|||+|||
T Consensus       152 vKAgnILi~~dG~VkLadFg  171 (516)
T KOG0582|consen  152 VKAGNILIDSDGTVKLADFG  171 (516)
T ss_pred             cccccEEEcCCCcEEEcCce
Confidence            99999999999999999997

>KOG0586|consensus

Probab=99.87  E-value=1.4e-23  Score=169.56  Aligned_cols=96  Identities=29%  Similarity=0.416  Sum_probs=88.9

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++|||||+++.+...  ...+|+||||+.+|++++++....    ...+..++.+|.|+++|++|||+++|+||
T Consensus       106 v~imk~l~HPnIvkl~~v~~t--~~~lylV~eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsaveYcH~k~ivHr  179 (596)
T KOG0586|consen  106 VDIMKSLNHPNIVKLFSVIET--EATLYLVMEYASGGELFDYLVKHG----RMKEKEARAKFRQIVSAVEYCHSKNIVHR  179 (596)
T ss_pred             HHHHHhcCCcceeeeeeeeee--cceeEEEEEeccCchhHHHHHhcc----cchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence            378889999999999999887  568999999999999999997643    57789999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++|||++.+.++||+|||+
T Consensus       180 dLk~eNilL~~~mnikIaDfgf  201 (596)
T KOG0586|consen  180 DLKAENILLDENMNIKIADFGF  201 (596)
T ss_pred             ccchhhcccccccceeeecccc
Confidence            9999999999999999999985

>KOG0669|consensus

Probab=99.86  E-value=2.5e-23  Score=152.30  Aligned_cols=109  Identities=19%  Similarity=0.329  Sum_probs=91.9

Q ss_pred             hhcCCCCCCCcccCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHH
Q psy18117        103 MALFPPLPSGVLYSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR  176 (215)
Q Consensus       103 ~~~~~~~~~~~~~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~  176 (215)
                      +.++|...-.++.++..++|+|++.+.+.|....      ...+|+||.+|++ ||..++...   +..++...++.++.
T Consensus        56 KeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~---~vr~sls~Ikk~Mk  131 (376)
T KOG0669|consen   56 KEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNR---KVRFSLSEIKKVMK  131 (376)
T ss_pred             ccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCc---cccccHHHHHHHHH
Confidence            4555554444557888999999999999885432      1248999999999 999998543   24599999999999


Q ss_pred             HHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        177 QIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       177 ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++.+||.|+|+..|+|||+||+|+|++.+|.+||+|||.
T Consensus       132 ~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen  132 GLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             HHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence            999999999999999999999999999999999999984

>KOG0664|consensus

Probab=99.86  E-value=6.7e-23  Score=151.85  Aligned_cols=96  Identities=26%  Similarity=0.385  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ..+..++|.|+....+....+..   +++|.++|++.. ||..+|..    ...++...++-++.||++||.|||+.+|+
T Consensus       104 kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-DLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~IL  178 (449)
T KOG0664|consen  104 KMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-DLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTANIL  178 (449)
T ss_pred             HHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-hhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcchh
Confidence            56778899999999998875542   579999999998 99999854    34689999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||.|+||++++++||||||+
T Consensus       179 HRDIKPGNLLVNSNCvLKICDFGL  202 (449)
T KOG0664|consen  179 HRDIKPGNLLVNSNCILKICDFGL  202 (449)
T ss_pred             hccCCCccEEeccCceEEeccccc
Confidence            999999999999999999999985

>KOG0604|consensus

Probab=99.86  E-value=4.3e-23  Score=154.24  Aligned_cols=106  Identities=21%  Similarity=0.231  Sum_probs=87.3

Q ss_pred             CCCCCcccCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        108 PLPSGVLYSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       108 ~~~~~~~~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      +.++|+-.-...-.|||||.+.++|...-+  ..+.+|||+++||+|...|+.++.  ..++|.++..+++||+.|++||
T Consensus       100 KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~l  177 (400)
T KOG0604|consen  100 KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYL  177 (400)
T ss_pred             HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHH
Confidence            334444233345569999999999875332  356789999999999999988553  4699999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccc---eeecccccC
Q psy18117        186 HSRRILHRGERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |+.+|.||||||+|+|..+.+   .+||+|||+
T Consensus       178 H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  178 HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             HhcchhhccCChhheeeecCCCCcceEeccccc
Confidence            999999999999999997654   999999985

>KOG0197|consensus

Probab=99.86  E-value=1.7e-23  Score=166.59  Aligned_cols=99  Identities=21%  Similarity=0.262  Sum_probs=90.7

Q ss_pred             cccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      ++.+++.++|+++|++++++..  ++-++|||||++.|+|.++|+.  ..+..+...+...++.||++|++||+++++||
T Consensus       251 Ea~iMk~L~H~~lV~l~gV~~~--~~piyIVtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IH  326 (468)
T KOG0197|consen  251 EAQIMKKLRHEKLVKLYGVCTK--QEPIYIVTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESKNYIH  326 (468)
T ss_pred             HHHHHHhCcccCeEEEEEEEec--CCceEEEEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhCCccc
Confidence            4577889999999999999976  3469999999999999999976  34557999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||-..||||++++.+||+|||+
T Consensus       327 RDLAARNiLV~~~~~vKIsDFGL  349 (468)
T KOG0197|consen  327 RDLAARNILVDEDLVVKISDFGL  349 (468)
T ss_pred             hhhhhhheeeccCceEEEccccc
Confidence            99999999999999999999995

>KOG0578|consensus

Probab=99.86  E-value=2.3e-23  Score=166.82  Aligned_cols=95  Identities=26%  Similarity=0.481  Sum_probs=87.9

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++..+|+|||++++.|..  .++++.||||++||+|.+.+...     .++|.++..+.+++++||+|||.+||+||
T Consensus       321 i~Vm~~~~H~NiVnfl~Sylv--~deLWVVMEym~ggsLTDvVt~~-----~~~E~qIA~Icre~l~aL~fLH~~gIiHr  393 (550)
T KOG0578|consen  321 ILVMRDLHHPNIVNFLDSYLV--GDELWVVMEYMEGGSLTDVVTKT-----RMTEGQIAAICREILQGLKFLHARGIIHR  393 (550)
T ss_pred             HHHHHhccchHHHHHHHHhcc--cceeEEEEeecCCCchhhhhhcc-----cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence            356778899999999999986  57899999999999999998653     39999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||-+|||++.+|.+||+|||+
T Consensus       394 DIKSDnILL~~~g~vKltDFGF  415 (550)
T KOG0578|consen  394 DIKSDNILLTMDGSVKLTDFGF  415 (550)
T ss_pred             ccccceeEeccCCcEEEeeeee
Confidence            9999999999999999999985

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.86  E-value=4.5e-23  Score=165.41  Aligned_cols=95  Identities=18%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|++|+++++.+.+  ...+++|||||++|+|.+++..    +..+++..++.++.|++.||+|||++||+|||
T Consensus        53 ~il~~~~~~~iv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~givHrD  126 (363)
T cd05628          53 DILVEADSLWVVKMFYSFQD--KLNLYLIMEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLGFIHRD  126 (363)
T ss_pred             HHHHhCCCCCcceEEEEEec--CCeEEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence            44567789999999998876  5689999999999999999864    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lKp~NILi~~~~~vkL~DFGl  147 (363)
T cd05628         127 IKPDNLLLDSKGHVKLSDFGL  147 (363)
T ss_pred             CCHHHeEECCCCCEEEeeccC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=3.6e-23  Score=171.43  Aligned_cols=99  Identities=25%  Similarity=0.310  Sum_probs=89.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++.+..  ++.+++||||+++|+|.+++......+..+++..+..++.|++.||.|||+++|+|||
T Consensus       117 ~~l~~l~Hpniv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrD  194 (478)
T PTZ00267        117 HCLAACDHFGIVKHFDDFKS--DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRD  194 (478)
T ss_pred             HHHHhCCCCCEeEEEEEEEE--CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECC
Confidence            56778899999999999876  5689999999999999999876555556799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       195 lkp~NIll~~~~~~kL~DFgl  215 (478)
T PTZ00267        195 LKSANIFLMPTGIIKLGDFGF  215 (478)
T ss_pred             cCHHhEEECCCCcEEEEeCcC
Confidence            999999999999999999984

>KOG0033|consensus

Probab=99.86  E-value=2.7e-23  Score=151.49  Aligned_cols=96  Identities=26%  Similarity=0.326  Sum_probs=85.3

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ..+.+.++||||++|.+.+..  ....|+|+|+++||+|..-|..+    .-.+|..+-.+++||++||+|||.+|||||
T Consensus        61 arIC~~LqHP~IvrL~~ti~~--~~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n~IvHR  134 (355)
T KOG0033|consen   61 ARICRKLQHPNIVRLHDSIQE--ESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSNGIVHR  134 (355)
T ss_pred             HHHHHhcCCCcEeehhhhhcc--cceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCceec
Confidence            367789999999999999865  57899999999999999887654    358999999999999999999999999999


Q ss_pred             ccchhhhhhhcc---ceeecccccC
Q psy18117        194 GERETFLSVLGD---CVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~---~~~ki~D~~~  215 (215)
                      |+||+|+|+.+.   --+||+|||.
T Consensus       135 DvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen  135 DLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             cCChhheeeeeccCCCceeecccce
Confidence            999999999654   3899999984

>KOG0662|consensus

Probab=99.86  E-value=3.1e-23  Score=144.93  Aligned_cols=95  Identities=28%  Similarity=0.365  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      -+++.++|.||++++++..+  ++.+.+|+|||+. +|..+....   ++.++.+.++.++.|+++|+.|||+++++|||
T Consensus        53 cllkelkhknivrl~dvlhs--dkkltlvfe~cdq-dlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchshnvlhrd  126 (292)
T KOG0662|consen   53 CLLKELKHKNIVRLHDVLHS--DKKLTLVFEFCDQ-DLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRD  126 (292)
T ss_pred             HHHHHhhhcceeehhhhhcc--CceeEEeHHHhhH-HHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence            45678899999999999876  6789999999998 999987653   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|+|++.+|.+|++|||.
T Consensus       127 lkpqnllin~ngelkladfgl  147 (292)
T KOG0662|consen  127 LKPQNLLINRNGELKLADFGL  147 (292)
T ss_pred             CCcceEEeccCCcEEecccch
Confidence            999999999999999999984

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=8.4e-23  Score=164.64  Aligned_cols=95  Identities=20%  Similarity=0.248  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  +..+++||||+++|+|.+++..    ...+++..++.++.|++.||+|||++||+|||
T Consensus        53 ~il~~l~hp~iv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrD  126 (377)
T cd05629          53 DVLAESDSPWVVSLYYSFQD--AQYLYLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRD  126 (377)
T ss_pred             HHHHhCCCCCcceEEEEEEc--CCeeEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            45567889999999999876  5689999999999999999854    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lkp~NIll~~~~~~kl~DfGl  147 (377)
T cd05629         127 IKPDNILIDRGGHIKLSDFGL  147 (377)
T ss_pred             CCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.85  E-value=6.9e-23  Score=165.07  Aligned_cols=95  Identities=17%  Similarity=0.243  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|+||+++++.+..  ++.+++|||||++|+|.+++..    ...+++..++.++.||+.||+|||++||+|||
T Consensus        53 ~il~~l~h~~iv~~~~~~~~--~~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrD  126 (376)
T cd05598          53 DILAEADNEWVVKLYYSFQD--KDNLYFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKMGFIHRD  126 (376)
T ss_pred             HHHHhCCCCCcceEEEEEEc--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            55677899999999999876  5689999999999999999854    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lkp~Nill~~~~~ikL~DFG~  147 (376)
T cd05598         127 IKPDNILIDRDGHIKLTDFGL  147 (376)
T ss_pred             CCHHHEEECCCCCEEEEeCCC
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.85  E-value=5.9e-23  Score=165.04  Aligned_cols=94  Identities=20%  Similarity=0.273  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||+++++.+.+  ++.+++||||+++|+|.+++..     ..+++..+..++.||+.||+|||++||+|||
T Consensus        95 ~i~~~~~hp~iv~~~~~~~~--~~~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD  167 (370)
T cd05621          95 DIMAFANSPWVVQLFCAFQD--DKYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMGLIHRD  167 (370)
T ss_pred             HHHHhCCCCCEeeEEEEEEc--CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            56678899999999998876  5689999999999999999853     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       168 LKp~NILl~~~~~~kL~DFG~  188 (370)
T cd05621         168 VKPDNMLLDKHGHLKLADFGT  188 (370)
T ss_pred             CCHHHEEECCCCCEEEEeccc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG1187|consensus

Probab=99.85  E-value=3.3e-23  Score=164.81  Aligned_cols=97  Identities=23%  Similarity=0.220  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh-HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC---Cc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ-ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR---RI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~-~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i  190 (215)
                      ..+..++|||+++|+++|.+  .+ +..||+||++.|+|.++|......  .+++....+|+.++++||.|||..   .|
T Consensus       123 ~~ls~l~H~Nlv~LlGyC~e--~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~i  198 (361)
T KOG1187|consen  123 EILSRLRHPNLVKLLGYCLE--GGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPI  198 (361)
T ss_pred             HHHhcCCCcCcccEEEEEec--CCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCE
Confidence            66778889999999999986  34 599999999999999998652211  789999999999999999999974   49


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||||+|||+|++.++||+|||.
T Consensus       199 iHrDiKssNILLD~~~~aKlsDFGL  223 (361)
T KOG1187|consen  199 IHRDIKSSNILLDEDFNAKLSDFGL  223 (361)
T ss_pred             ecCCCCHHHeeECCCCCEEccCccC
Confidence            9999999999999999999999984

>KOG0597|consensus

Probab=99.85  E-value=3e-23  Score=166.58  Aligned_cols=94  Identities=29%  Similarity=0.394  Sum_probs=88.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||++.+++|++  ..++++|+|||.| +|..+|+.    ...++|..+..+..|++.||.|||+++|+|||
T Consensus        53 ~i~r~lkHpniv~m~esfEt--~~~~~vVte~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd  125 (808)
T KOG0597|consen   53 RILRSLKHPNIVEMLESFET--SAHLWVVTEYAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRD  125 (808)
T ss_pred             HHHHhcCCcchhhHHHhhcc--cceEEEEehhhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            67889999999999999987  5789999999998 99999976    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||.|||++..|++|+||||+
T Consensus       126 ~kPqniLl~~~~~~KlcdFg~  146 (808)
T KOG0597|consen  126 MKPQNILLEKGGTLKLCDFGL  146 (808)
T ss_pred             CCcceeeecCCCceeechhhh
Confidence            999999999999999999984

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.85  E-value=9.6e-23  Score=164.58  Aligned_cols=95  Identities=17%  Similarity=0.240  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|+||+++++.+.+  ++.+++|||||++|+|.+++..    ...+++..++.++.||+.||+|||++||+|||
T Consensus        53 ~il~~~~h~~iv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrD  126 (382)
T cd05625          53 DILAEADNEWVVRLYYSFQD--KDNLYFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKMGFIHRD  126 (382)
T ss_pred             HHHHhCCCCcCCeEEEEEEe--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45667889999999999876  5689999999999999999854    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       127 lKp~NILl~~~g~~kL~DFGl  147 (382)
T cd05625         127 IKPDNILIDRDGHIKLTDFGL  147 (382)
T ss_pred             CCHHHEEECCCCCEEEeECCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.85  E-value=1e-22  Score=160.96  Aligned_cols=95  Identities=22%  Similarity=0.288  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++...+..  ++.+++||||+++|+|.+++..    ...+++..+..++.||+.||+|||++||+|||
T Consensus        47 ~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD  120 (323)
T cd05571          47 RVLQNTRHPFLTALKYSFQT--HDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRD  120 (323)
T ss_pred             HHHHhCCCCCCCCEEEEEEc--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            45677889999999988876  5678999999999999998854    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       121 lkp~NIll~~~~~~kl~DfG~  141 (323)
T cd05571         121 LKLENLMLDKDGHIKITDFGL  141 (323)
T ss_pred             CCHHHEEECCCCCEEEeeCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.85  E-value=1e-22  Score=161.95  Aligned_cols=95  Identities=21%  Similarity=0.247  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+.+++||||+.+|+|.+++..    +..+++..+..++.|++.||.|||++||+|||
T Consensus        83 ~~l~~l~hp~Iv~~~~~~~~--~~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  156 (340)
T PTZ00426         83 KILNYINHPFCVNLYGSFKD--ESYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRD  156 (340)
T ss_pred             HHHHhCCCCCCcceEEEEEe--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence            56677899999999999876  4678999999999999999864    33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       157 Lkp~NILl~~~~~ikL~DFG~  177 (340)
T PTZ00426        157 LKPENLLLDKDGFIKMTDFGF  177 (340)
T ss_pred             CCHHHEEECCCCCEEEecCCC
Confidence            999999999999999999984

>KOG0608|consensus

Probab=99.85  E-value=8.5e-23  Score=165.95  Aligned_cols=95  Identities=17%  Similarity=0.244  Sum_probs=87.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..-..++||+|+-.|.+  .+.+|+||+|++|||+..+|-..    +.|+|..++.|...+..|+++.|..|+||||
T Consensus       681 DILAEADn~WVVrLyySFQD--kdnLYFVMdYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkmGFIHRD  754 (1034)
T KOG0608|consen  681 DILAEADNEWVVRLYYSFQD--KDNLYFVMDYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKMGFIHRD  754 (1034)
T ss_pred             hhHhhcCCcceEEEEEEecc--CCceEEEEeccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            66777789999999999987  57899999999999999998553    4699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||||.+|++||+|||+
T Consensus       755 iKPDNILIDrdGHIKLTDFGL  775 (1034)
T KOG0608|consen  755 IKPDNILIDRDGHIKLTDFGL  775 (1034)
T ss_pred             cCccceEEccCCceeeeeccc
Confidence            999999999999999999985

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.4e-22  Score=157.83  Aligned_cols=95  Identities=19%  Similarity=0.248  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+.+  +..+++||||+++|+|.+++..    +..+++..+..++.|++.||.|||++||+|||
T Consensus        53 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  126 (291)
T cd05612          53 RVLKEVSHPFIIRLFWTEHD--QRFLYMLMEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRD  126 (291)
T ss_pred             HHHHhCCCCcHhhhHhhhcc--CCeEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            55678899999999998876  5678999999999999999864    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       127 lkp~NIli~~~~~~kl~Dfg~  147 (291)
T cd05612         127 LKPENILLDKEGHIKLTDFGF  147 (291)
T ss_pred             CCHHHeEECCCCCEEEEecCc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.4e-22  Score=162.60  Aligned_cols=95  Identities=19%  Similarity=0.231  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++.+++|||||++|+|.+++..    +..+++..++.++.|++.||+|||++||+|||
T Consensus        53 ~il~~l~h~~iv~~~~~~~~--~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~D  126 (364)
T cd05599          53 DILAEADNPWVVKLYYSFQD--ENYLYLIMEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKLGYIHRD  126 (364)
T ss_pred             HHHHhCCCCCCcceEEEEEc--CCeEEEEECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            45667789999999999876  5689999999999999999854    33699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lkp~NIl~~~~~~~kl~Dfg~  147 (364)
T cd05599         127 IKPDNLLLDAKGHIKLSDFGL  147 (364)
T ss_pred             CCHHHeEECCCCCEEEeeccc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.85  E-value=1.6e-22  Score=160.19  Aligned_cols=95  Identities=20%  Similarity=0.296  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++.+++||||+++|+|.+++..    ...+++..++.++.|++.||+|||++||+|||
T Consensus        70 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  143 (329)
T PTZ00263         70 SILMELSHPFIVNMMCSFQD--ENRVYFLLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRD  143 (329)
T ss_pred             HHHHhCCCCCCCcEEEEEEc--CCEEEEEEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            45677899999999998876  5689999999999999999864    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       144 lkp~NIll~~~~~~kl~Dfg~  164 (329)
T PTZ00263        144 LKPENLLLDNKGHVKVTDFGF  164 (329)
T ss_pred             CCHHHEEECCCCCEEEeeccC
Confidence            999999999999999999984

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.85  E-value=1.5e-22  Score=163.40  Aligned_cols=95  Identities=17%  Similarity=0.237  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++..+.+  .+.+++||||+++|+|.+++..    ...+++..++.++.||+.||+|||++||+|||
T Consensus        53 ~il~~l~h~~iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD  126 (381)
T cd05626          53 DILAEADNEWVVKLYYSFQD--KDNLYFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKMGFIHRD  126 (381)
T ss_pred             HHHHhcCCCCeeeeEEEEec--CCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            45667899999999999876  5679999999999999999854    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++++||+|||.
T Consensus       127 lKp~Nili~~~~~~kL~DFGl  147 (381)
T cd05626         127 IKPDNILIDLDGHIKLTDFGL  147 (381)
T ss_pred             CcHHHEEECCCCCEEEeeCcC
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.85  E-value=1.6e-22  Score=159.76  Aligned_cols=94  Identities=24%  Similarity=0.336  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++.+.+..  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||.|||++||+|||
T Consensus        47 ~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D  120 (323)
T cd05595          47 RVLQNTRHPFLTALKYAFQT--HDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRD  120 (323)
T ss_pred             HHHHhCCCCCCcceeeEEec--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            45677899999999998876  4678999999999999988754    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       121 lkp~NIll~~~~~~kL~Dfg  140 (323)
T cd05595         121 IKLENLMLDKDGHIKITDFG  140 (323)
T ss_pred             CCHHHEEEcCCCCEEecccH
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.85  E-value=2.2e-22  Score=158.92  Aligned_cols=94  Identities=22%  Similarity=0.346  Sum_probs=84.3

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +.+.++||||+++++.+..  .+..++||||+++|+|...+..    ...+++..+..++.||++||.|||++||+||||
T Consensus        49 ~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl  122 (321)
T cd05603          49 LLKNLKHPFLVGLHYSFQT--AEKLYFVLDYVNGGELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL  122 (321)
T ss_pred             HHHhCCCCCccceeeEEEc--CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence            4567889999999988876  4688999999999999888754    335889999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       123 kp~NIll~~~~~~kl~Dfg~  142 (321)
T cd05603         123 KPENILLDSQGHVVLTDFGL  142 (321)
T ss_pred             CHHHeEECCCCCEEEccCCC
Confidence            99999999999999999983

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.1e-22  Score=158.39  Aligned_cols=95  Identities=18%  Similarity=0.218  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++.+.+..  .+..++||||+++|+|.+++..    ...+++..+..++.|++.||.|||++||+|||
T Consensus        45 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrD  118 (312)
T cd05585          45 TVLAQVNCPFIVPLKFSFQS--PEKLYLVLAFINGGELFHHLQR----EGRFDLSRARFYTAELLCALENLHKFNVIYRD  118 (312)
T ss_pred             HHHHhCCCCcEeceeeEEec--CCeEEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence            45667899999999988876  5688999999999999999864    33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       119 lkp~Nili~~~~~~kl~Dfg~  139 (312)
T cd05585         119 LKPENILLDYQGHIALCDFGL  139 (312)
T ss_pred             CCHHHeEECCCCcEEEEECcc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.85  E-value=2e-22  Score=159.62  Aligned_cols=95  Identities=23%  Similarity=0.312  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++...+..  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||.|||++||+|||
T Consensus        47 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  120 (328)
T cd05593          47 RVLKNTRHPFLTSLKYSFQT--KDRLCFVMEYVNGGELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD  120 (328)
T ss_pred             HHHHhCCCCCCcceEEEEEc--CCEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            45667889999999988876  5678999999999999988754    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       121 ikp~NIll~~~~~~kL~DfG~  141 (328)
T cd05593         121 LKLENLMLDKDGHIKITDFGL  141 (328)
T ss_pred             cCHHHeEECCCCcEEEecCcC
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4717|consensus

Probab=99.84  E-value=1.3e-22  Score=161.59  Aligned_cols=96  Identities=30%  Similarity=0.419  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||||+|+++..+  +..+|||+|+-++|||+++|..+.+   .+.|..+++||.||+.|+.|||+..|||||
T Consensus        69 RCMKLVQHpNiVRLYEViDT--QTKlyLiLELGD~GDl~DyImKHe~---Gl~E~La~kYF~QI~~AI~YCHqLHVVHRD  143 (864)
T KOG4717|consen   69 RCMKLVQHPNIVRLYEVIDT--QTKLYLILELGDGGDLFDYIMKHEE---GLNEDLAKKYFAQIVHAISYCHQLHVVHRD  143 (864)
T ss_pred             HHHHHhcCcCeeeeeehhcc--cceEEEEEEecCCchHHHHHHhhhc---cccHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence            45678899999999999876  5689999999999999999976543   499999999999999999999999999999


Q ss_pred             cchhhhhh-hccceeecccccC
Q psy18117        195 ERETFLSV-LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~-~~~~~~ki~D~~~  215 (215)
                      |||+|+.+ ..-|.|||+|||+
T Consensus       144 LKPENVVFFEKlGlVKLTDFGF  165 (864)
T KOG4717|consen  144 LKPENVVFFEKLGLVKLTDFGF  165 (864)
T ss_pred             CCcceeEEeeecCceEeeeccc
Confidence            99999986 5568999999985

>KOG1989|consensus

Probab=99.84  E-value=3.1e-22  Score=167.42  Aligned_cols=98  Identities=24%  Similarity=0.264  Sum_probs=83.9

Q ss_pred             cCCccCC-Ccchhhhhhhh-cCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLH-HPNIVELRSAF-ASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~-~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+++.|. |+|||.+++.. ....    .-+++|+||||.+|.|.+++..+...+  |+|.++.+||.|+++|+.+||..
T Consensus        86 ~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~--lte~eVLkIf~dv~~AVa~mH~~  163 (738)
T KOG1989|consen   86 DIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTR--LTEDEVLKIFYDVCEAVAAMHYL  163 (738)
T ss_pred             HHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHhcC
Confidence            4555665 99999999932 2211    125789999999999999998866543  99999999999999999999988


Q ss_pred             C--ccccccchhhhhhhccceeeccccc
Q psy18117        189 R--ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       189 ~--i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      .  |||||||-|||||+.+|+.||||||
T Consensus       164 ~pPiIHRDLKiENvLls~~g~~KLCDFG  191 (738)
T KOG1989|consen  164 KPPIIHRDLKIENVLLSADGNYKLCDFG  191 (738)
T ss_pred             CCccchhhhhhhheEEcCCCCEEeCccc
Confidence            7  9999999999999999999999998

>KOG4645|consensus

Probab=99.84  E-value=8.6e-22  Score=170.32  Aligned_cols=102  Identities=19%  Similarity=0.312  Sum_probs=90.1

Q ss_pred             CCCCCCCcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        106 FPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       106 ~~~~~~~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      ++..+.+ ..+...++|||+|+++++-..  .+.+++.||||++|+|.++++.    ....+|...+.|..|++.|+.||
T Consensus      1278 ~~~i~eE-m~vlE~lnHpNlV~YyGVEvH--Rekv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~L 1350 (1509)
T KOG4645|consen 1278 FKLIAEE-MKVLEGLNHPNLVRYYGVEVH--REKVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYL 1350 (1509)
T ss_pred             CcchHHH-HHHHHhccCccccccCceeec--HHHHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHH
Confidence            3444443 378889999999999998655  5789999999999999999865    23588999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccceeeccccc
Q psy18117        186 HSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |++|||||||||+||+++.+|.+|+.|||
T Consensus      1351 H~~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1351 HEHGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred             HhcCceecCCCccceeeecCCcEEeeccc
Confidence            99999999999999999999999999998

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=2.3e-22  Score=158.91  Aligned_cols=95  Identities=23%  Similarity=0.340  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ++.+++||||+++|+|.+++..    ...+++..+..++.|++.||.|||++||+|||
T Consensus        52 ~il~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  125 (323)
T cd05584          52 NILEAVKHPFIVDLIYAFQT--GGKLYLILEYLSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQGIIYRD  125 (323)
T ss_pred             HHHHhCCCCchhceeeEEec--CCeEEEEEeCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45677899999999998876  4678999999999999998854    34588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       126 lkp~Nil~~~~~~~kl~Dfg~  146 (323)
T cd05584         126 LKPENILLDAQGHVKLTDFGL  146 (323)
T ss_pred             CCHHHeEECCCCCEEEeeCcC
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.84  E-value=2.9e-22  Score=158.46  Aligned_cols=94  Identities=23%  Similarity=0.352  Sum_probs=84.5

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +.+.++||||+++++.+..  ++..++||||+++|+|..++..    ...+++..+..++.||+.||.|||++||+||||
T Consensus        49 ~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl  122 (325)
T cd05604          49 LLKNVKHPFLVGLHYSFQT--TEKLYFVLDFVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSINIVYRDL  122 (325)
T ss_pred             HHHhCCCCCCccEEEEEec--CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            3456889999999988876  5688999999999999988754    346899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       123 kp~NIll~~~~~~kL~DfG~  142 (325)
T cd05604         123 KPENILLDSQGHVVLTDFGL  142 (325)
T ss_pred             CHHHeEECCCCCEEEeecCC
Confidence            99999999999999999983

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.84  E-value=3.3e-22  Score=157.99  Aligned_cols=94  Identities=23%  Similarity=0.352  Sum_probs=84.5

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ..+.++||||+++++.+..  .+..++||||+++|+|..++..    ...+++..+..++.||+.||.|||++||+||||
T Consensus        49 ~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di  122 (323)
T cd05575          49 LLKNVKHPFLVGLHYSFQT--ADKLYFVLDYVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDL  122 (323)
T ss_pred             HHhhCCCCCCCCeeEEEEe--CCEEEEEEcCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            3457789999999988876  4678999999999999998854    336899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       123 kp~NIll~~~~~~kl~Dfg~  142 (323)
T cd05575         123 KPENILLDSQGHVVLTDFGL  142 (323)
T ss_pred             CHHHeEECCCCcEEEeccCC
Confidence            99999999999999999983

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.84  E-value=3.4e-22  Score=158.03  Aligned_cols=94  Identities=23%  Similarity=0.324  Sum_probs=84.3

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      .++.++||||+++++.+..  .+.+++||||+++|+|.+++..    ...+++..+..++.||++||.|||++||+||||
T Consensus        49 ~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl  122 (325)
T cd05602          49 LLKNVKHPFLVGLHFSFQT--ADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDL  122 (325)
T ss_pred             HHHhCCCCCCCceeEEEEc--CCeEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence            3456789999999998876  5678999999999999998854    335889999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       123 kp~Nili~~~~~~kl~DfG~  142 (325)
T cd05602         123 KPENILLDSQGHIVLTDFGL  142 (325)
T ss_pred             CHHHeEECCCCCEEEccCCC
Confidence            99999999999999999983

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.84  E-value=2.1e-22  Score=160.05  Aligned_cols=100  Identities=20%  Similarity=0.264  Sum_probs=83.5

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------------------------------
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------------------------------  162 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------------------------------  162 (215)
                      .++..+ +||||+++++.+... +..++++|||+++|+|.+++......                               
T Consensus        62 ~~l~~l~~h~niv~~~~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (338)
T cd05102          62 KILIHIGNHLNVVNLLGACTKP-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAG  140 (338)
T ss_pred             HHHHHhccCcceeeEEeEecCC-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccc
Confidence            334455 799999999987653 34688999999999999998753210                               


Q ss_pred             ---------------------------cCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        163 ---------------------------KCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       163 ---------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                                                 ...+++..+..++.|+++||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~  220 (338)
T cd05102         141 QASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGL  220 (338)
T ss_pred             cCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeeccc
Confidence                                       12477788899999999999999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=2.6e-22  Score=158.23  Aligned_cols=95  Identities=24%  Similarity=0.309  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++.+++||||+++|+|.+++..    ...+++..++.++.|+++||.|||++||+|||
T Consensus        50 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  123 (318)
T cd05582          50 DILAEVNHPFIVKLHYAFQT--EGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLGIIYRD  123 (318)
T ss_pred             HHHHhCCCCCcccEEEEEEc--CCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            45677899999999998876  5678999999999999998854    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       124 lkp~Nil~~~~~~~kL~Dfg~  144 (318)
T cd05582         124 LKPENILLDEEGHIKLTDFGL  144 (318)
T ss_pred             CCHHHeEECCCCcEEEeeccC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.84  E-value=3.5e-22  Score=160.11  Aligned_cols=95  Identities=18%  Similarity=0.224  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|++++++++.+.+  .+.+++||||+++|+|.+++..    +..+++..++.++.|++.||+|||++||+|||
T Consensus        53 ~~l~~l~~~~iv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~givHrD  126 (360)
T cd05627          53 DILVEADGAWVVKMFYSFQD--KRNLYLIMEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLGFIHRD  126 (360)
T ss_pred             HHHHhCCCCCEeeEEEEEEc--CCEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence            44567789999999998876  5689999999999999999854    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       127 Lkp~NIli~~~~~vkL~DfG~  147 (360)
T cd05627         127 IKPDNLLLDAKGHVKLSDFGL  147 (360)
T ss_pred             CCHHHEEECCCCCEEEeeccC
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.84  E-value=3e-22  Score=161.01  Aligned_cols=94  Identities=20%  Similarity=0.265  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||+++++..+..  ++.+++||||+++|+|.+++..     ..+++..+..++.||+.||.|||++||+|||
T Consensus        95 ~il~~~~h~~iv~~~~~~~~--~~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD  167 (370)
T cd05596          95 DIMAHANSEWIVQLHYAFQD--DKYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMGFIHRD  167 (370)
T ss_pred             HHHHhCCCCCcceEEEEEec--CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            45677899999999988876  5679999999999999998853     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       168 Lkp~NILl~~~~~~kL~DfG~  188 (370)
T cd05596         168 VKPDNMLLDKSGHLKLADFGT  188 (370)
T ss_pred             CCHHHEEEcCCCCEEEEeccc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.84  E-value=3.7e-22  Score=154.69  Aligned_cols=99  Identities=25%  Similarity=0.287  Sum_probs=87.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|++++++...+..  ....++||||+++|+|..++.........+++..+..++.|++.||.|||++||+|||
T Consensus        45 ~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  122 (280)
T cd05608          45 RILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRD  122 (280)
T ss_pred             HHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45678899999999888865  4578999999999999988755433445699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       123 lkp~Nili~~~~~~~l~dfg~  143 (280)
T cd05608         123 LKPENVLLDNDGNVRISDLGL  143 (280)
T ss_pred             CCHHHEEECCCCCEEEeeCcc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.84  E-value=3.4e-22  Score=158.10  Aligned_cols=95  Identities=22%  Similarity=0.311  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      .+...++||||+++...+..  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||.|||+ +||+||
T Consensus        47 ~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr  120 (325)
T cd05594          47 RVLQNSRHPFLTALKYSFQT--HDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYR  120 (325)
T ss_pred             HHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence            34567789999999988876  4679999999999999988754    3358999999999999999999997 899999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       121 Dikp~NIll~~~~~~kL~Dfg~  142 (325)
T cd05594         121 DLKLENLMLDKDGHIKITDFGL  142 (325)
T ss_pred             CCCCCeEEECCCCCEEEecCCC
Confidence            9999999999999999999983

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.83  E-value=7.3e-22  Score=155.87  Aligned_cols=91  Identities=22%  Similarity=0.367  Sum_probs=82.5

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||||+++++.+..  .+.+++||||+++|+|..++..    ...+++..+..++.|++.||.|||++||+||||||+
T Consensus        52 ~~~h~~iv~~~~~~~~--~~~~~iv~Ey~~~g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~  125 (320)
T cd05590          52 ARNHPFLTQLYCCFQT--PDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLD  125 (320)
T ss_pred             ccCCCchhceeeEEEc--CCEEEEEEcCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHH
Confidence            3479999999998876  5679999999999999998854    235899999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 NIli~~~~~~kL~DfG~  142 (320)
T cd05590         126 NVLLDHEGHCKLADFGM  142 (320)
T ss_pred             HeEECCCCcEEEeeCCC
Confidence            99999999999999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.83  E-value=3.2e-22  Score=160.85  Aligned_cols=94  Identities=20%  Similarity=0.267  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||++++..+..  +..+++||||+++|+|.+++..     ..+++..+..++.||+.||.|||++||+|||
T Consensus        95 ~i~~~~~hp~iv~~~~~~~~--~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  167 (371)
T cd05622          95 DIMAFANSPWVVQLFYAFQD--DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRD  167 (371)
T ss_pred             HHHHhCCCCCCCeEEEEEEc--CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            45667899999999998875  5679999999999999999854     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       168 Lkp~NIll~~~~~ikL~DfG~  188 (371)
T cd05622         168 VKPDNMLLDKSGHLKLADFGT  188 (371)
T ss_pred             CCHHHEEECCCCCEEEEeCCc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.83  E-value=7.8e-22  Score=155.45  Aligned_cols=91  Identities=23%  Similarity=0.360  Sum_probs=82.6

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||||+++++.+..  +..+++||||+++|+|..++..    ...+++..+..++.|++.||.|||++||+||||||+
T Consensus        52 ~~~hp~i~~~~~~~~~--~~~~~lv~e~~~gg~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~  125 (316)
T cd05592          52 AWEHPFLTHLFCTFQT--KEHLFFVMEYLNGGDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLD  125 (316)
T ss_pred             ccCCCCccceeeEEEc--CCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence            4579999999998876  4679999999999999998854    335899999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 Nill~~~~~~kL~Dfg~  142 (316)
T cd05592         126 NVLLDKDGHIKIADFGM  142 (316)
T ss_pred             HeEECCCCCEEEccCcC
Confidence            99999999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=5.3e-22  Score=157.44  Aligned_cols=95  Identities=18%  Similarity=0.198  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++..++||||+++|+|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        53 ~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d  126 (333)
T cd05600          53 DILTTTKSEWLVKLLYAFQD--DEYLYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELGYIHRD  126 (333)
T ss_pred             HHHHhCCCCCCccEEEEEEc--CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            45567789999999998876  5679999999999999999854    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lkp~Nil~~~~~~~kL~Dfg~  147 (333)
T cd05600         127 LKPENFLIDASGHIKLTDFGL  147 (333)
T ss_pred             CCHHHEEECCCCCEEEEeCcC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.9e-22  Score=156.27  Aligned_cols=89  Identities=19%  Similarity=0.274  Sum_probs=81.6

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||+++.++..+..  ....++||||+++|+|..++..    +..+++..++.++.||++||.|||++||+||||||+||
T Consensus        54 ~~p~i~~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Ni  127 (330)
T cd05586          54 ESPFIVGLKFSFQT--DSDLYLVTDYMSGGELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENI  127 (330)
T ss_pred             CCCcCcceEEEEec--CCeEEEEEcCCCCChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHe
Confidence            69999999998876  4679999999999999988854    34689999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.++.+||+|||.
T Consensus       128 li~~~~~~kl~Dfg~  142 (330)
T cd05586         128 LLDATGHIALCDFGL  142 (330)
T ss_pred             EECCCCCEEEecCCc
Confidence            999999999999984

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG4250|consensus

Probab=99.83  E-value=4.4e-22  Score=163.19  Aligned_cols=101  Identities=22%  Similarity=0.298  Sum_probs=87.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      +.+++.++|+|||+++++-.+..    .....++||||.+|||...++. +++...++|.++..++.++..|+.|||.+|
T Consensus        62 ieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~-PEN~~GLpE~e~l~lL~d~~~al~~LrEn~  140 (732)
T KOG4250|consen   62 IEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNS-PENAYGLPESEFLDLLSDLVSALRHLRENG  140 (732)
T ss_pred             HHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcC-cccccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            47788999999999999876543    3456789999999999999975 555667999999999999999999999999


Q ss_pred             ccccccchhhhhhh--ccc--eeecccccC
Q psy18117        190 ILHRGERETFLSVL--GDC--VRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~--~~~--~~ki~D~~~  215 (215)
                      |+||||||.||++-  ++|  .-||+|||.
T Consensus       141 IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen  141 IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            99999999999973  334  899999983

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.83  E-value=8.5e-22  Score=155.23  Aligned_cols=91  Identities=23%  Similarity=0.356  Sum_probs=82.6

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||+++++++.+..  .+.+++||||+.+|+|..++..    +..+++..+..++.|+++||+|||++||+||||||+
T Consensus        52 ~~~~~~i~~~~~~~~~--~~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~  125 (316)
T cd05620          52 AWENPFLTHLYCTFQT--KEHLFFVMEFLNGGDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLD  125 (316)
T ss_pred             ccCCCCccCeeEEEEe--CCEEEEEECCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence            4579999999998876  4689999999999999998854    345899999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 Nil~~~~~~~kl~Dfg~  142 (316)
T cd05620         126 NVMLDRDGHIKIADFGM  142 (316)
T ss_pred             HeEECCCCCEEeCccCC
Confidence            99999999999999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.83  E-value=9.4e-22  Score=155.29  Aligned_cols=91  Identities=20%  Similarity=0.333  Sum_probs=82.3

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||+|+++++.+..  .+.+++||||+++|+|...+..    ...+++..+..++.|++.||.|||++||+||||||+
T Consensus        52 ~~~hp~i~~~~~~~~~--~~~~~lv~E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~  125 (321)
T cd05591          52 AAKHPFLTALHCCFQT--KDRLFFVMEYVNGGDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLD  125 (321)
T ss_pred             ccCCCCccceeeEEEc--CCeEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence            3479999999999876  4679999999999999988854    235899999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 Nill~~~~~~kL~Dfg~  142 (321)
T cd05591         126 NILLDAEGHCKLADFGM  142 (321)
T ss_pred             HeEECCCCCEEEeeccc
Confidence            99999999999999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG4721|consensus

Probab=99.83  E-value=4.4e-22  Score=160.13  Aligned_cols=95  Identities=22%  Similarity=0.400  Sum_probs=87.0

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.-++.++||||+.+.++|..  .-..++|||||..|-|...|+.    +..+......+|..+|+.|++|||.+.||||
T Consensus       163 IKHLRkLkH~NII~FkGVCtq--sPcyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~hKIIHR  236 (904)
T KOG4721|consen  163 IKHLRKLKHPNIITFKGVCTQ--SPCYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLHKIIHR  236 (904)
T ss_pred             HHHHHhccCcceeeEeeeecC--CceeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHhhHhhh
Confidence            356789999999999999976  3578999999999999999966    3468888999999999999999999999999


Q ss_pred             ccchhhhhhhccceeeccccc
Q psy18117        194 GERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||.-||||..+.++||+|||
T Consensus       237 DLKSPNiLIs~~d~VKIsDFG  257 (904)
T KOG4721|consen  237 DLKSPNILISYDDVVKISDFG  257 (904)
T ss_pred             ccCCCceEeeccceEEecccc
Confidence            999999999999999999998

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.83  E-value=1.1e-21  Score=155.45  Aligned_cols=92  Identities=26%  Similarity=0.400  Sum_probs=82.8

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...+||||+++++.+..  .+.+++||||+++|+|..++..    ...+++..++.++.|++.||.|||++||+||||||
T Consensus        51 ~~~~hp~iv~~~~~~~~--~~~~~lv~E~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp  124 (329)
T cd05618          51 QASNHPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKL  124 (329)
T ss_pred             hcCCCCcCCceeeEEEe--CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCH
Confidence            34579999999998876  4688999999999999988754    33699999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||++.++.+||+|||.
T Consensus       125 ~Nili~~~~~~kL~DfG~  142 (329)
T cd05618         125 DNVLLDSEGHIKLTDYGM  142 (329)
T ss_pred             HHEEECCCCCEEEeeCCc
Confidence            999999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.83  E-value=1.1e-21  Score=155.47  Aligned_cols=89  Identities=26%  Similarity=0.405  Sum_probs=81.5

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||||+++++.+..  .+.+++||||+++|+|..++..    ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        54 ~hp~Iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Ni  127 (329)
T cd05588          54 NHPFLVGLHSCFQT--ESRLFFVIEFVSGGDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNV  127 (329)
T ss_pred             CCCCCCceEEEEEc--CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHe
Confidence            69999999998876  4678999999999999988754    23699999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.++.+||+|||.
T Consensus       128 li~~~~~~kL~Dfg~  142 (329)
T cd05588         128 LLDAEGHIKLTDYGM  142 (329)
T ss_pred             EECCCCCEEECcCcc
Confidence            999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.83  E-value=7.4e-22  Score=156.08  Aligned_cols=92  Identities=23%  Similarity=0.309  Sum_probs=83.3

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      ...++||||+++++.+..  .+..++||||+++|+|..++..     ..+++..+..++.|++.||.|||++||+|||||
T Consensus        56 ~~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlk  128 (324)
T cd05589          56 ANSERHPFLVNLFACFQT--EDHVCFVMEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLK  128 (324)
T ss_pred             ccccCCCChhceeeEEEc--CCEEEEEEcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCC
Confidence            456789999999998876  5689999999999999888743     358999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|||++.++.+||+|||.
T Consensus       129 p~Nill~~~~~~kL~Dfg~  147 (324)
T cd05589         129 LDNLLLDTEGFVKIADFGL  147 (324)
T ss_pred             HHHeEECCCCcEEeCcccC
Confidence            9999999999999999983

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.2e-22  Score=156.60  Aligned_cols=96  Identities=19%  Similarity=0.226  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|++|+.++..+..  ++.+++||||+++|+|.+++...   ...+++..+..++.|++.||+|||++||+|||
T Consensus        53 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (331)
T cd05597          53 DVLVNGDRRWITNLHYAFQD--ENNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRD  127 (331)
T ss_pred             HHHHhCCCCCCCceEEEEec--CCeEEEEEecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECC
Confidence            44566789999999998876  56899999999999999998642   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       128 lkp~Nill~~~~~~kl~Dfg~  148 (331)
T cd05597         128 IKPDNVLLDKNGHIRLADFGS  148 (331)
T ss_pred             CCHHHEEECCCCCEEEEECCc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.83  E-value=1.3e-21  Score=155.12  Aligned_cols=94  Identities=19%  Similarity=0.241  Sum_probs=83.1

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ++..+ +|++++.+...+..  ++.+++||||+++|+|.+++..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        57 ~l~~l~~~~~i~~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrD  130 (332)
T cd05614          57 VLEHVRQSPFLVTLHYAFQT--EAKLHLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRD  130 (332)
T ss_pred             HHHhccCCCCcccEEEEEec--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence            33444 58999999988865  4678999999999999999854    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       131 lkp~Nili~~~~~~kl~DfG~  151 (332)
T cd05614         131 IKLENILLDSEGHVVLTDFGL  151 (332)
T ss_pred             CCHHHeEECCCCCEEEeeCcC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.83  E-value=8.1e-22  Score=156.19  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|+|++++...+..  .+..++||||+++|+|.+++...   +..+++..++.++.|+++||.|||+++|+|||
T Consensus        53 ~i~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~D  127 (330)
T cd05601          53 DILSISNSPWIPQLQYAFQD--KDNLYLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRD  127 (330)
T ss_pred             HHHHhCCCCCCcceeeEEec--CCeEEEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccc
Confidence            44567789999999988876  46789999999999999998653   23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       128 lkp~NIll~~~~~~kL~Dfg~  148 (330)
T cd05601         128 IKPENVLIDRTGHIKLADFGS  148 (330)
T ss_pred             CchHheEECCCCCEEeccCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.83  E-value=7.6e-22  Score=154.58  Aligned_cols=99  Identities=18%  Similarity=0.206  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH---------------hcCCchhHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ---------------KKCHLAECLVWSYFRQIA  179 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~---------------~~~~~~~~~~~~~~~ql~  179 (215)
                      ..+..++||||+++++.+..  .+..+++|||+++|+|.+++.....               ....+++..+..++.||+
T Consensus        71 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  148 (304)
T cd05096          71 KILSRLKDPNIIRLLGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIA  148 (304)
T ss_pred             HHHhhcCCCCeeEEEEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHH
Confidence            45567889999999998876  4578999999999999999865321               112367788999999999


Q ss_pred             HHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        180 AALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       180 ~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       149 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~  184 (304)
T cd05096         149 SGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGM  184 (304)
T ss_pred             HHHHHHHHCCccccCcchhheEEcCCccEEECCCcc
Confidence            999999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0607|consensus

Probab=99.82  E-value=2.3e-21  Score=146.33  Aligned_cols=91  Identities=23%  Similarity=0.330  Sum_probs=82.4

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ..-.|+||++|++.|.+  +.+.|||||-+.||.|...|..+.    .++|.++..+..+|+.||.|||.+||.|||+||
T Consensus       131 ~Cqgh~nilqLiefFEd--d~~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKP  204 (463)
T KOG0607|consen  131 QCQGHKNILQLIEFFED--DTRFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASALDFLHTKGIAHRDLKP  204 (463)
T ss_pred             HhcCCccHHHHHHHhcc--cceEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHHHHHhhcCcccccCCc
Confidence            44569999999999987  678999999999999999997643    699999999999999999999999999999999


Q ss_pred             hhhhhhccc---eeeccccc
Q psy18117        198 TFLSVLGDC---VRTVSEQA  214 (215)
Q Consensus       198 ~Nil~~~~~---~~ki~D~~  214 (215)
                      +|||..+..   .+|||||-
T Consensus       205 ENiLC~~pn~vsPvKiCDfD  224 (463)
T KOG0607|consen  205 ENILCESPNKVSPVKICDFD  224 (463)
T ss_pred             cceeecCCCCcCceeeeccc
Confidence            999986654   79999984

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2e-21  Score=155.04  Aligned_cols=95  Identities=22%  Similarity=0.256  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||+++++..+..  ++..++||||+++|+|.+++...    ..+++..++.++.|++.||.|||++||+|||
T Consensus        53 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~giiH~D  126 (350)
T cd05573          53 DILADADSPWIVKLYYSFQD--EEHLYLVMEYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKLGFIHRD  126 (350)
T ss_pred             HHHHhcCCCCccchhhheec--CCeEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            45567779999999998876  56899999999999999998652    4699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 lkp~NIll~~~~~~kL~Dfg~  147 (350)
T cd05573         127 IKPDNILIDADGHIKLADFGL  147 (350)
T ss_pred             CCHHHeEECCCCCEEeecCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.82  E-value=1.5e-21  Score=150.23  Aligned_cols=98  Identities=17%  Similarity=0.231  Sum_probs=84.2

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-KCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+.++|+||+++++.+..  ....++||||+++|+|.+++...... ....++..+..++.|++.|++|||+++|+|||
T Consensus        48 ~~~~l~h~nii~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  125 (269)
T cd05042          48 PYRELNHPNVLQCLGQCIE--SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSD  125 (269)
T ss_pred             HHHhCCCCCcceEEEEECC--CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEeccc
Confidence            3456789999999998875  46789999999999999998663321 22356788899999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       126 lkp~Nill~~~~~~kl~dfg~  146 (269)
T cd05042         126 LALRNCQLTADLSVKIGDYGL  146 (269)
T ss_pred             ccHhheEecCCCcEEEecccc
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.82  E-value=6.5e-22  Score=153.89  Aligned_cols=95  Identities=27%  Similarity=0.341  Sum_probs=83.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++||||+++ +|.+++...   ...+++..+..++.|+++||+|||++||+|||
T Consensus        55 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d  128 (288)
T cd07871          55 SLLKNLKHANIVTLHDIIHT--ERCLTLVFEYLDS-DLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRD  128 (288)
T ss_pred             HHHHhCCCCCEeeEEEEEcC--CCeEEEEEeCCCc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            55678899999999998865  4578999999986 999888542   23578999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       129 lkp~Nil~~~~~~~kl~DfG~  149 (288)
T cd07871         129 LKPQNLLINEKGELKLADFGL  149 (288)
T ss_pred             CCHHHEEECCCCCEEECcCcc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0194|consensus

Probab=99.82  E-value=1.2e-21  Score=157.88  Aligned_cols=96  Identities=23%  Similarity=0.315  Sum_probs=87.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.++++||||++++++...  ..-+++|||+|.||+|.++|+..++   .++..+...++.|.+.||+|||++++||||
T Consensus       213 rvMr~l~H~NVVr~yGVa~~--~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRD  287 (474)
T KOG0194|consen  213 RVMRQLNHPNVVRFYGVAVL--EEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSKNCIHRD  287 (474)
T ss_pred             HHHHhCCCCCEEEEEEEEcC--CCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHCCCcchh
Confidence            45678999999999998866  4679999999999999999976332   599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |-..|+|++.++++||+|||+
T Consensus       288 IAARNcL~~~~~~vKISDFGL  308 (474)
T KOG0194|consen  288 IAARNCLYSKKGVVKISDFGL  308 (474)
T ss_pred             HhHHHheecCCCeEEeCcccc
Confidence            999999999999999999985

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.82  E-value=9.6e-22  Score=155.87  Aligned_cols=96  Identities=18%  Similarity=0.205  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...+.|++|+.+.+.+..  .+..++||||+++|+|.+++...   +..+++..+..++.|++.||+|+|++||+|||
T Consensus        53 ~~l~~~~~~~i~~l~~~~~~--~~~~~lv~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrD  127 (331)
T cd05624          53 NVLVNGDCQWITTLHYAFQD--ENYLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRD  127 (331)
T ss_pred             HHHHhCCCCCEeeEEEEEEc--CCEEEEEEeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            34556789999999998876  56899999999999999999652   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       128 lkp~Nill~~~~~~kl~DfG~  148 (331)
T cd05624         128 IKPDNVLLDMNGHIRLADFGS  148 (331)
T ss_pred             CchHHEEEcCCCCEEEEeccc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.82  E-value=9.7e-22  Score=152.71  Aligned_cols=97  Identities=19%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|++++.+...+..  ++..++||||+++|+|..++...  ....+++..+..++.|++.||.|||++||+|||
T Consensus        52 ~il~~l~~~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05631          52 RILEKVNSRFVVSLAYAYET--KDALCLVLTIMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRD  127 (285)
T ss_pred             HHHHhcCCCcEEEEEEEEcc--CCeEEEEEEecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            56677889999999988876  45789999999999999887542  233589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       128 ikp~Nill~~~~~~kl~Dfg~  148 (285)
T cd05631         128 LKPENILLDDRGHIRISDLGL  148 (285)
T ss_pred             CCHHHEEECCCCCEEEeeCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.82  E-value=2.4e-21  Score=149.17  Aligned_cols=98  Identities=20%  Similarity=0.237  Sum_probs=85.3

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ....++|||++++++.+..  ....++||||+++|+|.+++..........++..+..++.|+++||.|||+++++||||
T Consensus        48 ~~~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di  125 (268)
T cd05086          48 PYRILQHPNILQCLGQCVE--AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL  125 (268)
T ss_pred             HHhccCCcchhheEEEecC--CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            3456789999999998876  45789999999999999999764333345677788999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       126 kp~nil~~~~~~~~l~Dfg~  145 (268)
T cd05086         126 ALRNCFLTSDLTVKVGDYGI  145 (268)
T ss_pred             ccceEEEcCCccEEeccccc
Confidence            99999999999999999973

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.82  E-value=1.9e-21  Score=154.00  Aligned_cols=91  Identities=26%  Similarity=0.382  Sum_probs=81.9

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||+++.+++.+..  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||+|||++||+||||||+
T Consensus        52 ~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~  125 (327)
T cd05617          52 ASSNPFLVGLHSCFQT--TSRLFLVIEYVNGGDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLD  125 (327)
T ss_pred             hcCCCCEeeEEEEEEe--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHH
Confidence            3469999999998876  4679999999999999988854    235999999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 Nili~~~~~~kl~Dfg~  142 (327)
T cd05617         126 NVLLDADGHIKLTDYGM  142 (327)
T ss_pred             HEEEeCCCCEEEecccc
Confidence            99999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.82  E-value=2.3e-21  Score=152.73  Aligned_cols=91  Identities=23%  Similarity=0.323  Sum_probs=82.6

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ..+||||+++++.+..  .+.+++||||+++|+|..++..    ...+++..+..++.|++.||.|||++||+||||||+
T Consensus        52 ~~~hp~iv~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~  125 (316)
T cd05619          52 AWEHPFLTHLYCTFQT--KENLFFVMEYLNGGDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLD  125 (316)
T ss_pred             ccCCCcCcceEEEEEe--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHH
Confidence            4689999999998876  4678999999999999999864    235889999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++.++.+||+|||.
T Consensus       126 Nil~~~~~~~kl~Dfg~  142 (316)
T cd05619         126 NILLDTDGHIKIADFGM  142 (316)
T ss_pred             HEEECCCCCEEEccCCc
Confidence            99999999999999983

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0612|consensus

Probab=99.82  E-value=1.8e-21  Score=166.42  Aligned_cols=94  Identities=22%  Similarity=0.228  Sum_probs=87.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..-+.++|+.|.-+|.+  ++.+|+||||++||||..++....    .++|..++-|+..|+.||+-+|+.|.||||
T Consensus       127 Dimv~~ns~Wiv~LhyAFQD--~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~mgyVHRD  200 (1317)
T KOG0612|consen  127 DIMVFGNSEWIVQLHYAFQD--ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSMGYVHRD  200 (1317)
T ss_pred             HHHHcCCcHHHHHHHHHhcC--ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhccceecc
Confidence            56667778999999999987  689999999999999999996532    599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||+|..|++||+|||
T Consensus       201 iKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  201 IKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             CCcceeEecccCcEeeccch
Confidence            99999999999999999998

>KOG0032|consensus

Probab=99.82  E-value=1.1e-21  Score=156.57  Aligned_cols=94  Identities=30%  Similarity=0.407  Sum_probs=85.2

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+. |||++.+.+.|.+  ...+++|||+|.||+|.+.|...     .++|..+..+++|+++|+.|||+.||+||
T Consensus        87 ~il~~l~~hpniv~l~~~~e~--~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~gvvHr  159 (382)
T KOG0032|consen   87 AILQQLSGHPNIVQLKDAFED--PDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLGVVHR  159 (382)
T ss_pred             HHHHhccCCCCEEEEEEEEEc--CCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCCceec
Confidence            6777787 9999999999987  45899999999999999999763     39999999999999999999999999999


Q ss_pred             ccchhhhhhhcc----ceeecccccC
Q psy18117        194 GERETFLSVLGD----CVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~----~~~ki~D~~~  215 (215)
                      |+||+|+|+...    +.+|++|||.
T Consensus       160 DlKpEN~L~~~~~~~~~~ik~~DFGl  185 (382)
T KOG0032|consen  160 DLKPENLLLASKDEGSGRIKLIDFGL  185 (382)
T ss_pred             cCCHHHeeeccccCCCCcEEEeeCCC
Confidence            999999998644    4799999984

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.82  E-value=1e-21  Score=153.80  Aligned_cols=95  Identities=26%  Similarity=0.283  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++++.+..  +...++||||+.+ +|.+++...   ...+++..++.++.|++.||.|||++||+|||
T Consensus        55 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  128 (303)
T cd07869          55 SLLKGLKHANIVLLHDIIHT--KETLTLVFEYVHT-DLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQRYILHRD  128 (303)
T ss_pred             HHHhhCCCCCcCeEEEEEec--CCeEEEEEECCCc-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45677899999999999876  4678999999975 888887542   34588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       129 lkp~Nill~~~~~~kl~Dfg~  149 (303)
T cd07869         129 LKPQNLLISDTGELKLADFGL  149 (303)
T ss_pred             CCHHHEEECCCCCEEECCCCc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.82  E-value=1.6e-21  Score=154.63  Aligned_cols=96  Identities=19%  Similarity=0.229  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|++++.+...+.+  .+.+++||||+++|+|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus        53 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrD  127 (332)
T cd05623          53 DVLVNGDNQWITTLHYAFQD--ENNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRD  127 (332)
T ss_pred             HHHhhCCCCCEeeEEEEEec--CCEEEEEEeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            34556789999999988876  46799999999999999998652   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       128 lkp~Nili~~~~~~kL~DfG~  148 (332)
T cd05623         128 IKPDNILMDMNGHIRLADFGS  148 (332)
T ss_pred             CCHHHEEECCCCCEEEeecch
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0694|consensus

Probab=99.82  E-value=5.2e-22  Score=162.28  Aligned_cols=88  Identities=25%  Similarity=0.335  Sum_probs=81.2

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||+++.|+..|.+  .+++|.||||+.|||+..+++.     ..+++..+.-|+..++.||+|||++|||+||||-+||
T Consensus       427 ~HPFL~~L~~~fQT--~~~l~fvmey~~Ggdm~~~~~~-----~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNi  499 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQT--KEHLFFVMEYVAGGDLMHHIHT-----DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNL  499 (694)
T ss_pred             cCCeEeeccccccc--CCeEEEEEEecCCCcEEEEEec-----ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhhe
Confidence            79999999999987  5799999999999996665532     3599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |+|.+|++||+|||+
T Consensus       500 LLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  500 LLDTEGHVKIADFGL  514 (694)
T ss_pred             EEcccCcEEeccccc
Confidence            999999999999995

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.82  E-value=3.2e-21  Score=155.28  Aligned_cols=99  Identities=19%  Similarity=0.241  Sum_probs=84.4

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------------------------------
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------------------------------  162 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------------------------------  162 (215)
                      .+.+.+ +|+||+++++.+..  ...+++|||||++|+|.+++......                               
T Consensus        93 ~il~~l~~h~nIv~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (374)
T cd05106          93 KILSHLGQHKNIVNLLGACTH--GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSD  170 (374)
T ss_pred             HHHHhhccCCceeeEeeEecC--CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccc
Confidence            344555 79999999998876  46799999999999999998653210                               


Q ss_pred             -----------------------------------cCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccce
Q psy18117        163 -----------------------------------KCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCV  207 (215)
Q Consensus       163 -----------------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~  207 (215)
                                                         ...+++..+..++.|+++||.|||++||+||||||+|||++.+++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~  250 (374)
T cd05106         171 SGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRV  250 (374)
T ss_pred             ccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCe
Confidence                                               123677889999999999999999999999999999999999999


Q ss_pred             eecccccC
Q psy18117        208 RTVSEQAK  215 (215)
Q Consensus       208 ~ki~D~~~  215 (215)
                      +||+|||.
T Consensus       251 ~kL~DfGl  258 (374)
T cd05106         251 AKICDFGL  258 (374)
T ss_pred             EEEeecee
Confidence            99999984

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.81  E-value=3.5e-21  Score=155.13  Aligned_cols=99  Identities=20%  Similarity=0.241  Sum_probs=84.4

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------------------------
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------------------------  161 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------------------------  161 (215)
                      .++..+ +||||+++++.+..  +...++|||||++|+|.+++.....                                
T Consensus        90 ~il~~l~~HpnIv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  167 (375)
T cd05104          90 KVLSYLGNHINIVNLLGACTV--GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNE  167 (375)
T ss_pred             HHHHHhcCCcceeeeeeeecc--CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhh
Confidence            344555 79999999999876  5679999999999999999864221                                


Q ss_pred             ---------------------------------------hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhh
Q psy18117        162 ---------------------------------------KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSV  202 (215)
Q Consensus       162 ---------------------------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~  202 (215)
                                                             ....+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill  247 (375)
T cd05104         168 YMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL  247 (375)
T ss_pred             hhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE
Confidence                                                   11246788899999999999999999999999999999999


Q ss_pred             hccceeecccccC
Q psy18117        203 LGDCVRTVSEQAK  215 (215)
Q Consensus       203 ~~~~~~ki~D~~~  215 (215)
                      +.++.+||+|||.
T Consensus       248 ~~~~~~kl~DfG~  260 (375)
T cd05104         248 THGRITKICDFGL  260 (375)
T ss_pred             ECCCcEEEecCcc
Confidence            9999999999984

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=2.4e-21  Score=156.75  Aligned_cols=95  Identities=23%  Similarity=0.352  Sum_probs=84.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ..+++.++||||+++++.|..  +...++++|++.+ +|..++..    +..+++..++.++.|++.||.|||++||+||
T Consensus       134 ~~il~~l~HpnIv~~~~~~~~--~~~~~lv~e~~~~-~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHr  206 (391)
T PHA03212        134 AHILRAINHPSIIQLKGTFTY--NKFTCLILPRYKT-DLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENRIIHR  206 (391)
T ss_pred             HHHHHhCCCCCCCCEeEEEEE--CCeeEEEEecCCC-CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            366788999999999998875  4678899999974 99888754    2358899999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       207 DiKP~NIll~~~~~vkL~DFG~  228 (391)
T PHA03212        207 DIKAENIFINHPGDVCLGDFGA  228 (391)
T ss_pred             CCChHhEEEcCCCCEEEEeCCc
Confidence            9999999999999999999984

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.81  E-value=3.2e-21  Score=148.32  Aligned_cols=96  Identities=20%  Similarity=0.322  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++++.+..  ++..++||||+++|+|.+++...   ...+++..+..++.|++.||+|||++|++|||
T Consensus        58 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~d  132 (266)
T cd05064          58 LTLGQFDHSNIVRLEGVITR--GNTMMIVTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKG  132 (266)
T ss_pred             HHHhcCCCCCcCeEEEEEec--CCCcEEEEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            34556789999999998865  56899999999999999998642   23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+|++|||.
T Consensus       133 ikp~nili~~~~~~~l~dfg~  153 (266)
T cd05064         133 LAAHKVLVNSDLVCKISGFRR  153 (266)
T ss_pred             ccHhhEEEcCCCcEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.81  E-value=5.4e-21  Score=151.13  Aligned_cols=89  Identities=21%  Similarity=0.325  Sum_probs=79.6

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +|++++.+...+..  .+.+++||||+++|+|.+++..    ...+++..+..++.|++.||.|||++||+||||||+||
T Consensus        59 ~~~~i~~~~~~~~~--~~~~~lv~Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Ni  132 (323)
T cd05615          59 KPPFLTQLHSCFQT--VDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNV  132 (323)
T ss_pred             CCCchhheeeEEec--CCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHe
Confidence            56778888888765  4578999999999999998854    33599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.++.+||+|||.
T Consensus       133 ll~~~~~ikL~Dfg~  147 (323)
T cd05615         133 MLDSEGHIKIADFGM  147 (323)
T ss_pred             EECCCCCEEEecccc
Confidence            999999999999983

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.81  E-value=3.3e-21  Score=152.98  Aligned_cols=96  Identities=25%  Similarity=0.425  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .+++.++||||+++++++...+.   ..+++||||+.+ +|.+++..    ...+++..++.++.|+++||.|||++||+
T Consensus        51 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  125 (338)
T cd07859          51 KLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTANVF  125 (338)
T ss_pred             HHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45677899999999988754322   247899999974 99998854    23589999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       126 H~dlkp~NIll~~~~~~kL~Dfg~  149 (338)
T cd07859         126 HRDLKPKNILANADCKLKICDFGL  149 (338)
T ss_pred             cCCCCHHHeEECCCCcEEEccCcc
Confidence            999999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.81  E-value=4.9e-21  Score=151.31  Aligned_cols=90  Identities=22%  Similarity=0.308  Sum_probs=80.7

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+|++++.+.+.+..  .+.+++||||+++|+|..++..    ...+++..+..++.|++.||.|||++||+||||||+|
T Consensus        58 ~~~~~i~~~~~~~~~--~~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  131 (323)
T cd05616          58 GKPPFLTQLHSCFQT--MDRLYFVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDN  131 (323)
T ss_pred             cCCCeEeeEEEEEec--CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHH
Confidence            358889988888865  4678999999999999998854    2358999999999999999999999999999999999


Q ss_pred             hhhhccceeecccccC
Q psy18117        200 LSVLGDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~~ki~D~~~  215 (215)
                      ||++.++.+||+|||.
T Consensus       132 ill~~~~~~kL~DfG~  147 (323)
T cd05616         132 VMLDSEGHIKIADFGM  147 (323)
T ss_pred             eEECCCCcEEEccCCC
Confidence            9999999999999983

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.81  E-value=5.2e-21  Score=151.26  Aligned_cols=92  Identities=22%  Similarity=0.294  Sum_probs=79.7

Q ss_pred             ccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        118 KTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       118 ~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      ..+. |++++.+...+..  .+.+++||||+++|+|.+++..    ...+++..+..++.||+.||.|||++||+|||||
T Consensus        55 ~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk  128 (324)
T cd05587          55 ALPGKPPFLTQLHSCFQT--MDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLK  128 (324)
T ss_pred             HhcCCCCceeeeEEEEEc--CCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence            3344 4567788877765  4679999999999999998854    3358999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|||++.++.+||+|||.
T Consensus       129 p~Nill~~~~~~kL~Dfg~  147 (324)
T cd05587         129 LDNVMLDAEGHIKIADFGM  147 (324)
T ss_pred             HHHeEEcCCCCEEEeecCc
Confidence            9999999999999999983

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0665|consensus

Probab=99.81  E-value=1.8e-20  Score=141.22  Aligned_cols=95  Identities=28%  Similarity=0.405  Sum_probs=84.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      +.....+.|+|+++++++|....    ..++|+|||+++. +|...+..      .++-..+..++.|++.|++|+|+.|
T Consensus        66 l~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~~  138 (369)
T KOG0665|consen   66 LKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILM------ELDHETISYILYQMLCGIKHLHSAG  138 (369)
T ss_pred             hhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhcc
Confidence            46678899999999999997543    2468999999998 99998863      2778889999999999999999999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||||||+||++..++.+||.|||.
T Consensus       139 IihRdLkPsnivv~~~~~lKi~dfg~  164 (369)
T KOG0665|consen  139 IIHRDLKPSNIVVNSDCTLKILDFGL  164 (369)
T ss_pred             eeecccCcccceecchhheeeccchh
Confidence            99999999999999999999999984

>KOG0577|consensus

Probab=99.81  E-value=1.9e-20  Score=151.36  Aligned_cols=94  Identities=17%  Similarity=0.258  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||.+++.++|..  ....+||||||-| +-.+++....+   ++.|..+..+..+.+.||.|||+.+.||||
T Consensus        78 rFL~~l~HPntieYkgCyLr--e~TaWLVMEYClG-SAsDlleVhkK---plqEvEIAAi~~gaL~gLaYLHS~~~IHRD  151 (948)
T KOG0577|consen   78 RFLRQLRHPNTIEYKGCYLR--EHTAWLVMEYCLG-SASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHSHNRIHRD  151 (948)
T ss_pred             HHHHhccCCCcccccceeec--cchHHHHHHHHhc-cHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHhhHHhhh
Confidence            55788999999999999987  5789999999997 88888877554   699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||..|||+++.|.|||+|||
T Consensus       152 iKAGNILLse~g~VKLaDFG  171 (948)
T KOG0577|consen  152 IKAGNILLSEPGLVKLADFG  171 (948)
T ss_pred             ccccceEecCCCeeeecccc
Confidence            99999999999999999998

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.80  E-value=8.8e-21  Score=149.60  Aligned_cols=89  Identities=25%  Similarity=0.388  Sum_probs=81.5

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +|||++++++.+..  .+.+++||||+++|+|..++..    ...+++..+..++.|++.||.|||+++|+||||||+||
T Consensus        54 ~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Ni  127 (318)
T cd05570          54 KHPFLTQLHSCFQT--KDRLFFVMEYVNGGDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNV  127 (318)
T ss_pred             CCCCccceeeEEEc--CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHe
Confidence            79999999998876  4679999999999999988854    23599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.++.+||+|||.
T Consensus       128 ll~~~~~~kl~Dfg~  142 (318)
T cd05570         128 LLDSEGHIKIADFGM  142 (318)
T ss_pred             EECCCCcEEecccCC
Confidence            999999999999983

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.80  E-value=4.8e-21  Score=150.86  Aligned_cols=100  Identities=25%  Similarity=0.412  Sum_probs=83.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH-----HhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR-----QKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~-----~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      .+++.++||||+++.+.+....+..++++|||+.+ +|.+++....     .+...+++..++.++.|++.||+|||++|
T Consensus        50 ~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  128 (317)
T cd07868          50 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             HHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56677899999999998876555678899999986 9988876422     11235899999999999999999999999


Q ss_pred             ccccccchhhhhh----hccceeecccccC
Q psy18117        190 ILHRGERETFLSV----LGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~----~~~~~~ki~D~~~  215 (215)
                      |+||||||+|||+    +.++.+||+|||.
T Consensus       129 ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868         129 VLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            9999999999999    4567999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=6.3e-21  Score=148.15  Aligned_cols=97  Identities=22%  Similarity=0.214  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|||++.+.+.+..  ++.+++||||+++|+|.+++...  ....+++..+..++.|++.|+.|||++||+|||
T Consensus        52 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  127 (285)
T cd05605          52 QILEKVNSRFVVSLAYAYET--KDALCLVLTLMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRERIVYRD  127 (285)
T ss_pred             HHHHhcCCCCEeeeeeeecC--CCeEEEEEeccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecC
Confidence            55677889999999998876  45799999999999999887542  234589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       128 lkp~Nil~~~~~~~~l~Dfg~  148 (285)
T cd05605         128 LKPENILLDDYGHIRISDLGL  148 (285)
T ss_pred             CCHHHEEECCCCCEEEeeCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.80  E-value=5.6e-21  Score=147.85  Aligned_cols=97  Identities=26%  Similarity=0.241  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++.+.+..  +...++||||+++|+|..++...  ....+++..+..++.|++.|++|||++||+|||
T Consensus        45 ~il~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~g~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  120 (277)
T cd05607          45 EILEKVNSPFIVNLAYAFES--KTHLCLVMSLMNGGDLKYHIYNV--GERGLEMERVIHYSAQITCGILHLHSMDIVYRD  120 (277)
T ss_pred             HHHHhcCCCcEEEEEEEEec--CCeEEEEEecCCCCCHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence            55678899999999988875  46789999999999999888542  233588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       121 ikp~Nili~~~~~~~l~Dfg~  141 (277)
T cd05607         121 MKPENVLLDDQGNCRLSDLGL  141 (277)
T ss_pred             CChHhEEEcCCCCEEEeecee
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0668|consensus

Probab=99.80  E-value=1.8e-20  Score=135.72  Aligned_cols=94  Identities=19%  Similarity=0.272  Sum_probs=83.9

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+. ||||+.|+++..++......+|+||..+-|...+...       ++...++.++.||+.||.|||++||+||
T Consensus        84 kIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS~GImHR  156 (338)
T KOG0668|consen   84 KILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHSMGIMHR  156 (338)
T ss_pred             HHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHhcCcccc
Confidence            5666665 9999999999998887889999999999777776543       8899999999999999999999999999


Q ss_pred             ccchhhhhhhccc-eeecccccC
Q psy18117        194 GERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      |+||.|+++|... .++|+|.|+
T Consensus       157 DVKPhNvmIdh~~rkLrlIDWGL  179 (338)
T KOG0668|consen  157 DVKPHNVMIDHELRKLRLIDWGL  179 (338)
T ss_pred             cCCcceeeechhhceeeeeecch
Confidence            9999999999775 899999884

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.80  E-value=3.5e-21  Score=153.93  Aligned_cols=91  Identities=24%  Similarity=0.347  Sum_probs=80.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|+||+++++.+..  ++.+++||||+++|+|....        ..++..+..++.||+.||.|||++||+|||
T Consensus       124 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  193 (353)
T PLN00034        124 EILRDVNHPNVVKCHDMFDH--NGEIQVLLEFMDGGSLEGTH--------IADEQFLADVARQILSGIAYLHRRHIVHRD  193 (353)
T ss_pred             HHHHhCCCCCcceeeeEecc--CCeEEEEEecCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            55678899999999998865  56789999999999986532        356788899999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       194 lkp~NIll~~~~~~kL~DfG~  214 (353)
T PLN00034        194 IKPSNLLINSAKNVKIADFGV  214 (353)
T ss_pred             CCHHHEEEcCCCCEEEccccc
Confidence            999999999999999999984

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.80  E-value=1.4e-20  Score=156.44  Aligned_cols=101  Identities=21%  Similarity=0.249  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh------HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ------ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~------~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ..+..++|+|++++...+......      .+++||||+++|+|.++|.........+++..+..++.|++.||.|+|++
T Consensus        83 ~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~  162 (496)
T PTZ00283         83 CCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK  162 (496)
T ss_pred             HHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            345567899999987766432211      25789999999999999976554455799999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+||||||+|||++.++.+||+|||.
T Consensus       163 ~IiHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        163 HMIHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             CEecCCCCHHHEEEeCCCCEEEEeccc
Confidence            999999999999999999999999984

>KOG0984|consensus

Probab=99.80  E-value=1.6e-20  Score=133.89  Aligned_cols=97  Identities=18%  Similarity=0.262  Sum_probs=87.4

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Cccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRG  194 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrD  194 (215)
                      .......|++|.+++.+.+  ..++++.||.++. +|..+-...-+++..++|..+-+++.-+..||.|||++ .|||||
T Consensus        98 ~~r~~~CPf~V~FyGa~~r--egdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRD  174 (282)
T KOG0984|consen   98 IMRTVDCPFTVHFYGALFR--EGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRD  174 (282)
T ss_pred             hccCCCCCeEEEeehhhhc--cccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhcc
Confidence            3456668999999998876  6789999999998 99999877777788999999999999999999999975 999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|||++.+|++||||||.
T Consensus       175 vKPsNiLIn~~GqVKiCDFGI  195 (282)
T KOG0984|consen  175 VKPSNILINYDGQVKICDFGI  195 (282)
T ss_pred             CCcceEEEccCCcEEEccccc
Confidence            999999999999999999984

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.80  E-value=1.4e-20  Score=146.31  Aligned_cols=96  Identities=23%  Similarity=0.315  Sum_probs=81.2

Q ss_pred             CccCCCcchhhhhhhhcCC---chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        117 DKTLHHPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ...+.||||+++++++...   ....+++||||+++ +|.+++....  ...+++..++.++.|+++||.|||++||+||
T Consensus        58 l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~  134 (290)
T cd07862          58 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHR  134 (290)
T ss_pred             hcccCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence            3456799999999887421   13468899999985 9999986532  2358899999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       135 dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862         135 DLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCCHHHEEEcCCCCEEEccccc
Confidence            9999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.80  E-value=8.5e-21  Score=150.19  Aligned_cols=96  Identities=23%  Similarity=0.317  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ++..++||||+++|+|.+++....  ...+++..++.++.|++.||.|||+++|+|||
T Consensus        51 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~d  126 (327)
T cd08227          51 HVSKLFNHPNIVPYRATFIA--DNELWVVTSFMAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMGYVHRS  126 (327)
T ss_pred             HHHHhcCCCCeeeEEEEEEE--CCEEEEEEeccCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            45677899999999999876  467899999999999999986532  23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.++++|++
T Consensus       127 lkp~Nil~~~~~~~~l~~~~  146 (327)
T cd08227         127 VKASHILISVDGKVYLSGLR  146 (327)
T ss_pred             CChhhEEEecCCcEEEcccc
Confidence            99999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.80  E-value=9.6e-21  Score=155.43  Aligned_cols=101  Identities=25%  Similarity=0.285  Sum_probs=83.7

Q ss_pred             ccCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS  187 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~  187 (215)
                      +.+++.++|||++++.+.+....      ...+++||||+++ +|.+++.........+++..++.++.||+.||.|||+
T Consensus       110 i~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~  188 (440)
T PTZ00036        110 LLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS  188 (440)
T ss_pred             HHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35677889999999987764311      1135689999996 8888887655555679999999999999999999999


Q ss_pred             CCccccccchhhhhhhccc-eeecccccC
Q psy18117        188 RRILHRGERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      +||+||||||+|||++.++ .+||+|||.
T Consensus       189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        189 KFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             CCEecCCcCHHHEEEcCCCCceeeecccc
Confidence            9999999999999998665 799999984

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.79  E-value=1.1e-20  Score=146.78  Aligned_cols=95  Identities=28%  Similarity=0.367  Sum_probs=82.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++.+.+..  ++.+++||||++++.+..+. .   ....+++..++.++.|++.||.|||++||+|||
T Consensus        52 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~-~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  125 (287)
T cd07848          52 KMLRTLKQENIVELKEAFRR--RGKLYLVFEYVEKNMLELLE-E---MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD  125 (287)
T ss_pred             HHHHhCCCccccchhhhEec--CCEEEEEEecCCCCHHHHHH-h---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            55677889999999999876  46789999999986665443 2   233589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 lkp~Nill~~~~~~kl~Dfg~  146 (287)
T cd07848         126 IKPENLLISHNDVLKLCDFGF  146 (287)
T ss_pred             CCHHHEEEcCCCcEEEeeccC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.79  E-value=1.1e-20  Score=146.51  Aligned_cols=98  Identities=23%  Similarity=0.278  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||++++.+.+...+...+++|+||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        57 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~d  133 (284)
T cd05081          57 EILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKRYVHRD  133 (284)
T ss_pred             HHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            456678899999998876554445688999999999999998542   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       134 lkp~nili~~~~~~~l~dfg~  154 (284)
T cd05081         134 LATRNILVESENRVKIGDFGL  154 (284)
T ss_pred             CCHhhEEECCCCeEEECCCcc
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.79  E-value=1.7e-20  Score=147.82  Aligned_cols=95  Identities=19%  Similarity=0.271  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||+++++.+..   ...++++||+.+|+|.+++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus        61 ~~l~~l~h~niv~~~g~~~~---~~~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~d  134 (316)
T cd05108          61 YVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRD  134 (316)
T ss_pred             HHHHhCCCCCCCeEEEEEcC---CCceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence            45677889999999998764   3577999999999999998652   23588899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 lkp~Nill~~~~~~kl~DfG~  155 (316)
T cd05108         135 LAARNVLVKTPQHVKITDFGL  155 (316)
T ss_pred             cchhheEecCCCcEEEccccc
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.3e-20  Score=152.68  Aligned_cols=96  Identities=20%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             cccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      ++.+++.++||||+++++.+..  ...++++||++.+ +|.+++..    ...+++..+..++.||+.||.|||++||+|
T Consensus       136 E~~il~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~givH  208 (392)
T PHA03207        136 EIDILKTISHRAIINLIHAYRW--KSTVCMVMPKYKC-DLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGRGIIH  208 (392)
T ss_pred             HHHHHHhcCCCCccceeeeEee--CCEEEEEehhcCC-CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            3467788999999999998865  4578999999975 99988833    346899999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       209 rDlkp~Nill~~~~~~~l~DfG~  231 (392)
T PHA03207        209 RDVKTENIFLDEPENAVLGDFGA  231 (392)
T ss_pred             cCCCHHHEEEcCCCCEEEccCcc
Confidence            99999999999999999999984

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.79  E-value=1e-20  Score=148.26  Aligned_cols=97  Identities=23%  Similarity=0.367  Sum_probs=84.1

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      ...+ +|+|++++++.+..  ++..+++|||+++|+|.+++.....            ....+++..++.++.|++.|++
T Consensus        61 l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~  138 (303)
T cd05088          61 LCKLGHHPNIINLLGACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  138 (303)
T ss_pred             HHHhcCCCCcceEEEEECC--CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHH
Confidence            3445 79999999998865  5679999999999999999865321            1235789999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++||+||||||+|||++.++.+||+|||.
T Consensus       139 ~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~  170 (303)
T cd05088         139 YLSQKQFIHRDLAARNILVGENYVAKIADFGL  170 (303)
T ss_pred             HHHhCCccccccchheEEecCCCcEEeCcccc
Confidence            99999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.79  E-value=1.8e-20  Score=142.90  Aligned_cols=96  Identities=24%  Similarity=0.309  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++++.+..  ....++||||+++++|.+++..   ....+++..++.++.|+++||.|||++||+|||
T Consensus        45 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  119 (252)
T cd05084          45 RILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQGGDFLTFLRT---EGPRLKVKELIQMVENAAAGMEYLESKHCIHRD  119 (252)
T ss_pred             HHHHhCCCCCcceEEEEEcC--CCCeEEEEeeccCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            44567789999999998876  4678999999999999999854   233588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       120 l~p~nil~~~~~~~kl~dfg~  140 (252)
T cd05084         120 LAARNCLVTEKNVLKISDFGM  140 (252)
T ss_pred             cchheEEEcCCCcEEECcccc
Confidence            999999999999999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG1152|consensus

Probab=99.79  E-value=5e-21  Score=154.08  Aligned_cols=103  Identities=23%  Similarity=0.272  Sum_probs=90.5

Q ss_pred             cCCCCCCCcccCCccCC---CcchhhhhhhhcCCchhHHHHHHhhh-cCCChHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q psy18117        105 LFPPLPSGVLYSDKTLH---HPNIVELRSAFASRSGQELFLVLELA-DQGDLALVIAECRQKKCHLAECLVWSYFRQIAA  180 (215)
Q Consensus       105 ~~~~~~~~~~~~~~~l~---h~~iv~l~~~~~~~~~~~~~lv~e~~-~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~  180 (215)
                      .+-.+|.|+ .++..++   |+||+++.+.|++  ++..|++||-- ++-||.++|+.    +..++|.+++.+|+|++.
T Consensus       609 kLGtVp~EI-qIla~l~~~sH~NIlKlLdfFEd--dd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~a  681 (772)
T KOG1152|consen  609 KLGTVPSEI-QILATLNKHSHENILKLLDFFED--DDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVA  681 (772)
T ss_pred             ccCccchhH-HHHHHhhhcCccchhhhhheeec--CCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHh
Confidence            334456665 7777777   9999999999987  57889999964 67899999976    346999999999999999


Q ss_pred             HHHHHHhCCccccccchhhhhhhccceeeccccc
Q psy18117        181 ALQYVHSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       181 ~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |+++||++||||||||-+|+.++++|-+||+|||
T Consensus       682 gi~hlh~~~ivhrdikdenvivd~~g~~klidfg  715 (772)
T KOG1152|consen  682 GIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFG  715 (772)
T ss_pred             ccccccccCceecccccccEEEecCCeEEEeecc
Confidence            9999999999999999999999999999999998

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=1.1e-20  Score=146.45  Aligned_cols=96  Identities=23%  Similarity=0.331  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++.+.+.......++++|||+++|+|.+++..     ..+++..+..++.|++.||.|||++||+|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~d  132 (283)
T cd05080          58 NILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQHYIHRD  132 (283)
T ss_pred             HHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            45677899999999987765434568899999999999999854     2489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       133 lkp~Nili~~~~~~~l~dfg~  153 (283)
T cd05080         133 LAARNVLLDNDRLVKIGDFGL  153 (283)
T ss_pred             cChheEEEcCCCcEEEeeccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=1.8e-20  Score=144.82  Aligned_cols=95  Identities=16%  Similarity=0.236  Sum_probs=82.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||+++++.+..  +...++||||+++|+|..++..   .+..+++..+..++.|++.||+|||+++|+|||
T Consensus        68 ~~~~~l~h~niv~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~d  142 (274)
T cd05076          68 SLMSQVSHIHLAFVHGVCVR--GSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDKNLVHGN  142 (274)
T ss_pred             HHHhcCCCCCeeeEEEEEEe--CCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence            34567889999999998876  4578999999999999988854   234688999999999999999999999999999


Q ss_pred             cchhhhhhhccc-------eeeccccc
Q psy18117        195 ERETFLSVLGDC-------VRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~-------~~ki~D~~  214 (215)
                      |||+|||++..+       .+||+|||
T Consensus       143 lkp~Nill~~~~~~~~~~~~~kl~d~g  169 (274)
T cd05076         143 VCAKNILLARLGLAEGTSPFIKLSDPG  169 (274)
T ss_pred             CCcccEEEeccCcccCccceeeecCCc
Confidence            999999997654       48999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.8e-20  Score=150.09  Aligned_cols=95  Identities=19%  Similarity=0.278  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ....++|||++.+ +|.+++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus       109 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  182 (357)
T PHA03209        109 MLLQNVNHPSVIRMKDTLVS--GAITCMVLPHYSS-DLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQRIIHRD  182 (357)
T ss_pred             HHHHhCCCCCCcChhheEEe--CCeeEEEEEccCC-cHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            56778899999999999876  4578899999975 999887542   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       183 lkp~Nill~~~~~~kl~DfG~  203 (357)
T PHA03209        183 VKTENIFINDVDQVCIGDLGA  203 (357)
T ss_pred             CCHHHEEECCCCCEEEecCcc
Confidence            999999999999999999984

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.79  E-value=1.2e-20  Score=149.67  Aligned_cols=95  Identities=20%  Similarity=0.269  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~Hr  193 (215)
                      .++..++||||+++++.+..  ++.+++||||+.+|+|.+++..    ...+++..+..++.|++.|+.|||++ +|+||
T Consensus        55 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~  128 (333)
T cd06650          55 QVLHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHR  128 (333)
T ss_pred             HHHHHCCCCcccceeEEEEE--CCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence            45667889999999999876  5689999999999999999864    23588999999999999999999975 79999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       129 dlkp~Nili~~~~~~kL~Dfg~  150 (333)
T cd06650         129 DVKPSNILVNSRGEIKLCDFGV  150 (333)
T ss_pred             CCChhhEEEcCCCCEEEeeCCc
Confidence            9999999999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=1.3e-20  Score=146.22  Aligned_cols=98  Identities=20%  Similarity=0.265  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.+.|||++++.+.+........+++|||+++++|.+++...   ...+++..+..++.|++.||+|+|++|++|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~d  134 (284)
T cd05079          58 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSRQYVHRD  134 (284)
T ss_pred             HHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            456678899999999887764345788999999999999998542   22588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       135 lkp~Nil~~~~~~~~l~dfg~  155 (284)
T cd05079         135 LAARNVLVESEHQVKIGDFGL  155 (284)
T ss_pred             cchheEEEcCCCCEEECCCcc
Confidence            999999999999999999983

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.79  E-value=1.3e-20  Score=149.41  Aligned_cols=95  Identities=21%  Similarity=0.266  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~Hr  193 (215)
                      ..+..++|||++++++.+..  ++.+++||||+++|+|.+++..    ...+++..+..++.|++.||.|||++ +|+||
T Consensus        55 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~  128 (331)
T cd06649          55 QVLHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHR  128 (331)
T ss_pred             HHHHHCCCCCCCeEEEEEEE--CCEEEEEeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence            45667889999999998876  4678999999999999999864    23589999999999999999999986 69999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       129 dlkp~Nil~~~~~~~kl~Dfg~  150 (331)
T cd06649         129 DVKPSNILVNSRGEIKLCDFGV  150 (331)
T ss_pred             CCChhhEEEcCCCcEEEccCcc
Confidence            9999999999999999999984

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.79  E-value=1.9e-20  Score=151.73  Aligned_cols=99  Identities=19%  Similarity=0.242  Sum_probs=84.3

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------------------------------
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------------------------------  162 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------------------------------  162 (215)
                      .++..+. ||||+++++++..  ...+++|||||++|+|.++|......                               
T Consensus        92 ~~l~~l~~HpnIv~l~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (400)
T cd05105          92 KIMTHLGPHLNIVNLLGACTK--SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVIL  169 (400)
T ss_pred             HHHHhcCCCCCeeeEEEEEcc--CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhh
Confidence            3455564 9999999999876  56799999999999999998653211                               


Q ss_pred             -------------------------------------------------------------cCCchhHHHHHHHHHHHHH
Q psy18117        163 -------------------------------------------------------------KCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       163 -------------------------------------------------------------~~~~~~~~~~~~~~ql~~~  181 (215)
                                                                                   ...+++..+..++.|+++|
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~a  249 (400)
T cd05105         170 SFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARG  249 (400)
T ss_pred             hhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence                                                                         1236778889999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||+++|+||||||+|||++.++.+||+|||.
T Consensus       250 L~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGl  283 (400)
T cd05105         250 MEFLASKNCVHRDLAARNVLLAQGKIVKICDFGL  283 (400)
T ss_pred             HHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCc
Confidence            9999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA02988 hypothetical protein; Provisional

Probab=99.78  E-value=1.6e-20  Score=145.78  Aligned_cols=97  Identities=12%  Similarity=0.049  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcC--CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFAS--RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~--~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~  191 (215)
                      ..+..++||||+++++.+.+  .....+++||||+++|+|.+++..    +..+++.....++.|++.|+.|+|+ .+++
T Consensus        70 ~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~  145 (283)
T PHA02988         70 KNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKP  145 (283)
T ss_pred             HHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCCCC
Confidence            56778899999999998765  223467899999999999999864    2358899999999999999999998 5999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       146 Hrdlkp~nill~~~~~~kl~dfg~  169 (283)
T PHA02988        146 YKNLTSVSFLVTENYKLKIICHGL  169 (283)
T ss_pred             CCcCChhhEEECCCCcEEEcccch
Confidence            999999999999999999999983

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.78  E-value=2e-20  Score=160.44  Aligned_cols=95  Identities=21%  Similarity=0.298  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||++++..+..  ...+++||||+.+++|.+++..    ...+++..++.++.||+.||.|||+++|+|||
T Consensus        56 ~~l~~l~hp~Iv~~~~~~~~--~~~~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD  129 (669)
T cd05610          56 DALALSKSPFIVHLYYSLQS--ANNVYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRHGIIHRD  129 (669)
T ss_pred             HHHHhcCCCCcCeEEEEEEE--CCEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            34456789999999988765  4679999999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       130 LKP~NILl~~~g~vkL~DFGl  150 (669)
T cd05610         130 LKPDNMLISNEGHIKLTDFGL  150 (669)
T ss_pred             ccHHHEEEcCCCCEEEEeCCC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.78  E-value=4e-20  Score=147.93  Aligned_cols=94  Identities=27%  Similarity=0.396  Sum_probs=80.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++.+....    ....+++|||+++ +|.+.+..      .+++..++.++.|+++||.|||++||
T Consensus        68 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~gi  140 (355)
T cd07874          68 VLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGI  140 (355)
T ss_pred             HHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            4566788999999999875422    1346899999987 77776642      38889999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       141 vHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874         141 IHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ccCCCChHHEEECCCCCEEEeeCcc
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=1.7e-20  Score=144.01  Aligned_cols=96  Identities=20%  Similarity=0.260  Sum_probs=82.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++.+..  ....+++|||+++|+|..++..   +...+++..+..++.|+++|+.|||+++|+|||
T Consensus        56 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  130 (262)
T cd05077          56 SMMRQVSHKHIVLLYGVCVR--DVENIMVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGN  130 (262)
T ss_pred             HHHHhCCCCCEeeEEEEEec--CCCCEEEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCC
Confidence            45567889999999998865  4578899999999999888753   234589999999999999999999999999999


Q ss_pred             cchhhhhhhccce-------eecccccC
Q psy18117        195 ERETFLSVLGDCV-------RTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~-------~ki~D~~~  215 (215)
                      |||+|||++.++.       +|++|||.
T Consensus       131 lkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077         131 VCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             CCcccEEEecCCccCCCCceeEeCCCCC
Confidence            9999999987664       89999973

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=2.8e-20  Score=142.15  Aligned_cols=95  Identities=18%  Similarity=0.223  Sum_probs=83.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++++.+..   ...++||||+++|+|.+++...+   ..+++..+..++.|++.||.|||++||+|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  126 (259)
T cd05037          53 SLMSQLSHKHLVKLYGVCVR---DENIMVEEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLEDKKLVHGN  126 (259)
T ss_pred             HHHHcCCCcchhheeeEEec---CCcEEEEEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCCeeccc
Confidence            34567889999999998765   45789999999999999986532   2588999999999999999999999999999


Q ss_pred             cchhhhhhhccc-------eeecccccC
Q psy18117        195 ERETFLSVLGDC-------VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~-------~~ki~D~~~  215 (215)
                      |||+|||++.++       .+||+|||.
T Consensus       127 lkp~Nill~~~~~~~~~~~~~kl~Dfg~  154 (259)
T cd05037         127 VCGKNILVARYGLNEGYVPFIKLSDPGI  154 (259)
T ss_pred             CccceEEEecCccccCCceeEEeCCCCc
Confidence            999999999888       899999984

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.78  E-value=2.1e-20  Score=143.86  Aligned_cols=99  Identities=17%  Similarity=0.221  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-KKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ...+.++|||++++++.+..  ....++||||+++|+|.+++..... ....+++..+..++.|++.|+.|||+++++||
T Consensus        47 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~  124 (269)
T cd05087          47 QPYRSLQHSNLLQCLGQCTE--VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHS  124 (269)
T ss_pred             HHHHhCCCCCEeeEEEEEcC--CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEecc
Confidence            45567789999999988765  4578999999999999999975432 12246677888999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||+++.++.+||+|||.
T Consensus       125 dlkp~nil~~~~~~~kL~dfg~  146 (269)
T cd05087         125 DLALRNCLLTADLTVKIGDYGL  146 (269)
T ss_pred             ccCcceEEEcCCCcEEECCccc
Confidence            9999999999999999999973

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0584|consensus

Probab=99.78  E-value=2.4e-20  Score=151.29  Aligned_cols=98  Identities=24%  Similarity=0.349  Sum_probs=88.5

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC--Ccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR--RIL  191 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--~i~  191 (215)
                      +.+++.|+||||+++++.+.+.....+.+|+|++..|+|..|++..+    ..+...++.|.+||++||.|||++  .||
T Consensus        92 v~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~----~vn~kaik~W~RQILkGL~yLHs~~PPII  167 (632)
T KOG0584|consen   92 VHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHR----RVNIKAIKSWCRQILKGLVYLHSQDPPII  167 (632)
T ss_pred             HHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhc----cCCHHHHHHHHHHHHHHhhhhhcCCCCcc
Confidence            36788999999999999999876667899999999999999997755    377889999999999999999987  799


Q ss_pred             ccccchhhhhhhcc-ceeecccccC
Q psy18117        192 HRGERETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~-~~~ki~D~~~  215 (215)
                      |||||-+||+|+.+ |.|||.|.|+
T Consensus       168 HRDLKCDNIFinG~~G~VKIGDLGL  192 (632)
T KOG0584|consen  168 HRDLKCDNIFVNGNLGEVKIGDLGL  192 (632)
T ss_pred             ccccccceEEEcCCcCceeecchhH
Confidence            99999999999876 7999999884

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.78  E-value=4.2e-20  Score=139.82  Aligned_cols=90  Identities=22%  Similarity=0.233  Sum_probs=81.5

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ...|||++++++.+..  .+..+++|||+++|+|.+++...    ..+++..+..++.|+++||.|||++||+||||||+
T Consensus        41 ~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~  114 (237)
T cd05576          41 PHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKLWSHISKF----LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPN  114 (237)
T ss_pred             hcCCCceeehhhheec--CCeEEEEEecCCCCCHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHH
Confidence            3458999999998876  46789999999999999998652    24899999999999999999999999999999999


Q ss_pred             hhhhhccceeeccccc
Q psy18117        199 FLSVLGDCVRTVSEQA  214 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~  214 (215)
                      ||+++.++.+|++||+
T Consensus       115 Nil~~~~~~~~l~df~  130 (237)
T cd05576         115 NILLDDRGHIQLTYFS  130 (237)
T ss_pred             HEEEcCCCCEEEeccc
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.78  E-value=4.2e-20  Score=143.11  Aligned_cols=92  Identities=22%  Similarity=0.270  Sum_probs=82.2

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...+||+++.+.+.+..  ++..++||||+++|+|.+++..    ...+++..+..++.|++.||.|||+++|+||||||
T Consensus        52 ~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp  125 (279)
T cd05633          52 STGDCPFIVCMTYAFHT--PDKLCFILDLMNGGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKP  125 (279)
T ss_pred             hhCCCCcEeEEEEEEec--CCeEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCH
Confidence            34578999999888865  4678999999999999998854    33699999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||+++++.+||+|||.
T Consensus       126 ~Nil~~~~~~~~l~dfg~  143 (279)
T cd05633         126 ANILLDEHGHVRISDLGL  143 (279)
T ss_pred             HHEEECCCCCEEEccCCc
Confidence            999999999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.78  E-value=3.9e-20  Score=143.23  Aligned_cols=94  Identities=21%  Similarity=0.290  Sum_probs=82.9

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ....+.||||+++++.+..   ...++++||+++|+|.+++...   +..+++..+..++.|++.||.|||+++++||||
T Consensus        62 ~l~~l~h~~iv~~~~~~~~---~~~~~i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dl  135 (279)
T cd05111          62 AMGSLDHAYIVRLLGICPG---ASLQLVTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNL  135 (279)
T ss_pred             HHhcCCCCCcceEEEEECC---CccEEEEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCEecccc
Confidence            3457789999999987643   4578899999999999998642   335899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       136 kp~nili~~~~~~kl~Dfg~  155 (279)
T cd05111         136 AARNILLKSDSIVQIADFGV  155 (279)
T ss_pred             CcceEEEcCCCcEEEcCCcc
Confidence            99999999999999999973

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.78  E-value=3e-20  Score=143.61  Aligned_cols=99  Identities=18%  Similarity=0.265  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------KCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+.+.++|||++++++.+..  +...++||||+++|+|.+++......      ...++...+..++.|+++||.|||++
T Consensus        61 ~~l~~l~~~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  138 (277)
T cd05062          61 SVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN  138 (277)
T ss_pred             HHHHhCCCCCeeeEEEEEcC--CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45567889999999998865  46789999999999999998653211      12356778899999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |++||||||+|||+++++.+||+|||.
T Consensus       139 ~~vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062         139 KFVHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             CcccCCcchheEEEcCCCCEEECCCCC
Confidence            999999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=1.5e-20  Score=154.37  Aligned_cols=95  Identities=23%  Similarity=0.237  Sum_probs=83.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|+||+++++.+..  ++..+++||++. ++|..++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus       212 ~iL~~L~HpnIv~l~~~~~~--~~~~~lv~e~~~-~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD  285 (461)
T PHA03211        212 RLLRRLSHPAVLALLDVRVV--GGLTCLVLPKYR-SDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD  285 (461)
T ss_pred             HHHHHCCCCCCCcEEEEEEE--CCEEEEEEEccC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence            56678899999999998765  467889999996 5999887542   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       286 LKP~NILl~~~~~vkL~DFGl  306 (461)
T PHA03211        286 IKTENVLVNGPEDICLGDFGA  306 (461)
T ss_pred             CCHHHEEECCCCCEEEcccCC
Confidence            999999999999999999984

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.78  E-value=1.7e-20  Score=147.26  Aligned_cols=95  Identities=27%  Similarity=0.361  Sum_probs=83.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|||++++++.+..  ++..++||||+++ +|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus        56 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d  129 (309)
T cd07872          56 SLLKDLKHANIVTLHDIVHT--DKSLTLVFEYLDK-DLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD  129 (309)
T ss_pred             HHHHhCCCCCcceEEEEEee--CCeEEEEEeCCCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45667889999999998876  4678999999986 888887542   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       130 lkp~Nill~~~~~~kl~Dfg~  150 (309)
T cd07872         130 LKPQNLLINERGELKLADFGL  150 (309)
T ss_pred             CCHHHEEECCCCCEEECcccc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.78  E-value=3.5e-20  Score=149.15  Aligned_cols=96  Identities=26%  Similarity=0.336  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++|+||+++++.+.....   ..+++|+||+.+ +|.+.+..    ...+++..++.++.||+.||.|||++||+
T Consensus        51 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iv  125 (372)
T cd07853          51 KMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAGIL  125 (372)
T ss_pred             HHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc-CHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45667889999999999875321   257899999985 88887743    34689999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       126 H~dlkp~Nili~~~~~~kL~Dfg~  149 (372)
T cd07853         126 HRDIKPGNLLVNSNCVLKICDFGL  149 (372)
T ss_pred             CCCCChHHEEECCCCCEEeccccc
Confidence            999999999999999999999983

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.78  E-value=3.3e-20  Score=144.30  Aligned_cols=99  Identities=21%  Similarity=0.301  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH---------HhcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---------QKKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      .....++||+++++++.+..  .+..+++|||+++++|.+++...+         .+...+++..+..++.|++.||.||
T Consensus        59 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l  136 (288)
T cd05093          59 ELLTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL  136 (288)
T ss_pred             HHHHhCCCCCcceEEEEEec--CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45567789999999998865  568899999999999999986532         1123489999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccceeecccccC
Q psy18117        186 HSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |++|++||||||+|||++.++.+||+|||.
T Consensus       137 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~  166 (288)
T cd05093         137 ASQHFVHRDLATRNCLVGENLLVKIGDFGM  166 (288)
T ss_pred             HhCCeeecccCcceEEEccCCcEEeccCCc
Confidence            999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.78  E-value=3.3e-20  Score=142.51  Aligned_cols=98  Identities=34%  Similarity=0.556  Sum_probs=87.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  .+..++++||+++|+|.+++.....++..+++..+..++.|++.||.|||+++++|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  131 (267)
T cd08228          54 DLLKQLNHPNVIKYLDSFIE--DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRD  131 (267)
T ss_pred             HHHHhCCCcceeeeeeeEEE--CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            45677889999999998876  4678899999999999999876554455689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.++|+|||
T Consensus       132 l~~~nil~~~~~~~~l~d~g  151 (267)
T cd08228         132 IKPANVFITATGVVKLGDLG  151 (267)
T ss_pred             CCHHHEEEcCCCCEEECccc
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.78  E-value=3.1e-20  Score=141.97  Aligned_cols=95  Identities=25%  Similarity=0.306  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  .+..++||||+++++|.+++...   ...+++..+..++.|++.|+.|||++|++|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  125 (256)
T cd05059          51 KVMMKLSHPNLVQLYGVCTK--QRPIFIVTEYMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRD  125 (256)
T ss_pred             HHHHhCCCCCEEEEEEEEcC--CCceEEEEecCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            44566789999999988765  45789999999999999998642   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       126 l~p~ni~i~~~~~~kl~dfg  145 (256)
T cd05059         126 LAARNCLVGEDNVVKVSDFG  145 (256)
T ss_pred             ccHhhEEECCCCcEEECCcc
Confidence            99999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.78  E-value=2.9e-20  Score=143.00  Aligned_cols=96  Identities=20%  Similarity=0.307  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++.+.+..  ++..+++|||+++|+|.+++...   ...+++..+..++.|++.|+.|||+++++|||
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~d  131 (267)
T cd05066          57 SIMGQFDHPNIIHLEGVVTK--SKPVMIVTEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRD  131 (267)
T ss_pred             HHHHhCCCCCcceEEEEEec--CCccEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehh
Confidence            45567789999999998865  46789999999999999998642   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       132 lkp~nili~~~~~~~l~dfg~  152 (267)
T cd05066         132 LAARNILVNSNLVCKVSDFGL  152 (267)
T ss_pred             hchhcEEECCCCeEEeCCCCc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0579|consensus

Probab=99.78  E-value=4.1e-20  Score=150.69  Aligned_cols=97  Identities=23%  Similarity=0.290  Sum_probs=88.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.++....||+|++|++.|.-  .+.++++.|||.||.++..+-...   ..+.+.++.-+.+|++.||.|||+++||||
T Consensus        80 IeILa~CdHP~ivkLl~ayy~--enkLwiliEFC~GGAVDaimlEL~---r~LtE~QIqvvc~q~ldALn~LHs~~iIHR  154 (1187)
T KOG0579|consen   80 IEILAECDHPVIVKLLSAYYF--ENKLWILIEFCGGGAVDAIMLELG---RVLTEDQIQVVCYQVLDALNWLHSQNIIHR  154 (1187)
T ss_pred             hhhhhcCCChHHHHHHHHHhc--cCceEEEEeecCCchHhHHHHHhc---cccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence            367888899999999999875  678999999999999999876543   369999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||..|||++-+|.++|+|||.
T Consensus       155 DLKAGNiL~TldGdirLADFGV  176 (1187)
T KOG0579|consen  155 DLKAGNILLTLDGDIRLADFGV  176 (1187)
T ss_pred             hccccceEEEecCcEeeecccc
Confidence            9999999999999999999983

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.78  E-value=3.2e-20  Score=141.95  Aligned_cols=96  Identities=17%  Similarity=0.228  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  ....+++|||+.+|+|.+++...   ...+++..++.++.|++.||.|||++|++|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  125 (256)
T cd05113          51 KVMMKLSHEKLVQLYGVCTK--QRPIYIVTEYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRD  125 (256)
T ss_pred             HHHhcCCCCCeeeEEEEEcc--CCCcEEEEEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            44567789999999998865  45689999999999999998652   22589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~p~nili~~~~~~kl~d~g~  146 (256)
T cd05113         126 LAARNCLVDDQGCVKVSDFGL  146 (256)
T ss_pred             cCcceEEEcCCCCEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.78  E-value=3.4e-20  Score=142.42  Aligned_cols=99  Identities=34%  Similarity=0.561  Sum_probs=88.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  ++..+++|||+++++|.+++......+..+++..++.++.|++.|+.|||++|++|||
T Consensus        54 ~~l~~~~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  131 (267)
T cd08229          54 DLLKQLNHPNVIKYYASFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRD  131 (267)
T ss_pred             HHHHHccCCchhhhhheeEe--CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45667889999999998876  4678999999999999999876444455689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~nili~~~~~~~l~dfg~  152 (267)
T cd08229         132 IKPANVFITATGVVKLGDLGL  152 (267)
T ss_pred             CCHHHEEEcCCCCEEECcchh
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.78  E-value=2.7e-20  Score=146.54  Aligned_cols=100  Identities=26%  Similarity=0.414  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-----hcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-----KKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-----~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      .+++.++|||++++.+.+....+..++++|||+.+ +|.+++.....     ....+++..++.++.|++.||.|||++|
T Consensus        50 ~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~  128 (317)
T cd07867          50 ALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             HHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55677899999999998865555678999999886 88888754321     1235889999999999999999999999


Q ss_pred             ccccccchhhhhh----hccceeecccccC
Q psy18117        190 ILHRGERETFLSV----LGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~----~~~~~~ki~D~~~  215 (215)
                      |+||||||+|||+    +.++.+||+|||.
T Consensus       129 ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867         129 VLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             EEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            9999999999999    4567999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.78  E-value=3.5e-20  Score=160.97  Aligned_cols=101  Identities=26%  Similarity=0.423  Sum_probs=86.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC------
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR------  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~------  188 (215)
                      .++..+.||||+++++.|.......+++||||+++|+|.++|.........+++..++.|+.||+.||.|||+.      
T Consensus        64 ~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~  143 (1021)
T PTZ00266         64 NVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNG  143 (1021)
T ss_pred             HHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            56678899999999998865445678999999999999999976554455799999999999999999999984      


Q ss_pred             -Cccccccchhhhhhhc-----------------cceeecccccC
Q psy18117        189 -RILHRGERETFLSVLG-----------------DCVRTVSEQAK  215 (215)
Q Consensus       189 -~i~HrDikp~Nil~~~-----------------~~~~ki~D~~~  215 (215)
                       +||||||||+||||+.                 .+.+||+|||.
T Consensus       144 k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGl  188 (1021)
T PTZ00266        144 ERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGL  188 (1021)
T ss_pred             CCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCc
Confidence             5999999999999964                 23599999984

>KOG0574|consensus

Probab=99.77  E-value=2.6e-20  Score=139.87  Aligned_cols=96  Identities=17%  Similarity=0.279  Sum_probs=87.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.++...|++|++++.|..  ..++++|||||..|++.+.+..+.   .+++|.++..+++..+.||+|||...=||||
T Consensus        80 SIMQQC~S~yVVKYYGSYFK--~sDLWIVMEYCGAGSiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRD  154 (502)
T KOG0574|consen   80 SIMQQCKSKYVVKYYGSYFK--HSDLWIVMEYCGAGSISDIMRARR---KPLSEQEISAVLRDTLKGLQYLHDLKKIHRD  154 (502)
T ss_pred             HHHHHcCCchhhhhhhhhcc--CCceEeehhhcCCCcHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHHHHHHHHhh
Confidence            45677888999999999876  468999999999999999997644   3799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||..|||++.+|+.||+|||.
T Consensus       155 IKAGNILLNT~G~AKLADFGV  175 (502)
T KOG0574|consen  155 IKAGNILLNTDGIAKLADFGV  175 (502)
T ss_pred             cccccEEEcccchhhhhhccc
Confidence            999999999999999999983

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.77  E-value=3.8e-20  Score=141.64  Aligned_cols=95  Identities=20%  Similarity=0.326  Sum_probs=83.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++.+.+..   ...++||||+++|+|.+++..   .+..+++..+..++.|++.|+.|||++|++|||
T Consensus        47 ~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  120 (257)
T cd05115          47 EIMHQLDNPYIVRMIGVCEA---EALMLVMEMASGGPLNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD  120 (257)
T ss_pred             HHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence            45567889999999988753   467899999999999998854   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       121 lkp~nil~~~~~~~kl~dfg~  141 (257)
T cd05115         121 LAARNVLLVNQHYAKISDFGL  141 (257)
T ss_pred             cchheEEEcCCCcEEeccCCc
Confidence            999999999999999999983

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.77  E-value=5e-20  Score=147.60  Aligned_cols=94  Identities=27%  Similarity=0.410  Sum_probs=80.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++.....    ..+++||||+++ +|.+.+..      .+++..+..++.|++.||.|||++||
T Consensus        72 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~i  144 (359)
T cd07876          72 VLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGI  144 (359)
T ss_pred             HHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            45677899999999998764321    247899999987 77766632      38889999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       145 vHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876         145 IHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ccCCCCHHHEEECCCCCEEEecCCC
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.77  E-value=6.5e-20  Score=142.61  Aligned_cols=99  Identities=19%  Similarity=0.252  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------KCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ...+.++|||++++++.+..  +...+++|||+++|+|.+++......      ...++...+..++.|++.||.|||++
T Consensus        61 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  138 (288)
T cd05061          61 SVMKGFTCHHVVRLLGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK  138 (288)
T ss_pred             HHHHhCCCCCeeeEEEEEcC--CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            45667789999999998865  45789999999999999999653211      12345677889999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+||||||+|||+++++.+||+|||.
T Consensus       139 ~i~H~dikp~nili~~~~~~~L~Dfg~  165 (288)
T cd05061         139 KFVHRDLAARNCMVAHDFTVKIGDFGM  165 (288)
T ss_pred             CCcCCCCChheEEEcCCCcEEECcCCc
Confidence            999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.77  E-value=4e-20  Score=144.83  Aligned_cols=98  Identities=21%  Similarity=0.293  Sum_probs=83.8

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHH
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      ....+ +||||+++++.+..  ....+++|||+.+|+|.+++.....            ....++...+..++.|++.||
T Consensus        73 ~l~~l~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  150 (304)
T cd05101          73 MMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGM  150 (304)
T ss_pred             HHHhhccCCCchheeEEEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHH
Confidence            34455 79999999998876  4678999999999999999975321            112477788999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+|||++.++.+||+|||.
T Consensus       151 ~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~  183 (304)
T cd05101         151 EYLASQKCIHRDLAARNVLVTENNVMKIADFGL  183 (304)
T ss_pred             HHHHHCCeeecccccceEEEcCCCcEEECCCcc
Confidence            999999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG2345|consensus

Probab=99.77  E-value=1.2e-19  Score=132.58  Aligned_cols=100  Identities=17%  Similarity=0.263  Sum_probs=89.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--  189 (215)
                      ..-+.++|||++++++......   ..+.|++++|...|+|.+.|+.+..++..++|.++..||.++++||++||+..  
T Consensus        70 d~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~  149 (302)
T KOG2345|consen   70 DNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPP  149 (302)
T ss_pred             HHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCc
Confidence            3456788999999998865421   23589999999999999999998888889999999999999999999999998  


Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      ..||||||+|||+.+++.++|.|||
T Consensus       150 yAH~DiKP~NILls~~~~~vl~D~G  174 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSGLPVLMDLG  174 (302)
T ss_pred             ccccCCCcceeEecCCCceEEEecc
Confidence            9999999999999999999999998

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.77  E-value=7.9e-20  Score=140.79  Aligned_cols=101  Identities=18%  Similarity=0.259  Sum_probs=83.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECR--QKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ..+..++|+|++++++.+....    ....+++|||+.+|+|.+++....  .+...+++..+..++.|++.||+|||++
T Consensus        52 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  131 (272)
T cd05075          52 VCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK  131 (272)
T ss_pred             HHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456778999999987653221    124688999999999999875422  1223488999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+||||||+|||++.++.+||+|||.
T Consensus       132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075         132 SFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             CeeccccchhheEEcCCCCEEECCCCc
Confidence            999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.77  E-value=8.4e-20  Score=141.35  Aligned_cols=92  Identities=22%  Similarity=0.273  Sum_probs=82.4

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ....||+++.+.+.+..  ....++||||+.+|+|..++..    ...+++..++.++.|+++|+.|||+++|+||||||
T Consensus        52 ~~~~~~~i~~~~~~~~~--~~~~~~v~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p  125 (278)
T cd05606          52 STGDCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKP  125 (278)
T ss_pred             HhCCCCcEeeeeeeeec--CCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCH
Confidence            34578999999988876  4578999999999999988753    34699999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+++.++.+||+|||.
T Consensus       126 ~nili~~~~~~kl~dfg~  143 (278)
T cd05606         126 ANILLDEHGHVRISDLGL  143 (278)
T ss_pred             HHEEECCCCCEEEccCcC
Confidence            999999999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.77  E-value=6.3e-20  Score=140.79  Aligned_cols=97  Identities=20%  Similarity=0.349  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  +..++++|||+++++|.+++...  ....+++..+..++.|+++||.|||++|++|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  129 (263)
T cd05052          54 AVMKEIKHPNLVQLLGVCTR--EPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD  129 (263)
T ss_pred             HHHHhCCCCChhheEEEEcC--CCCcEEEEEeCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            44566789999999998865  46789999999999999998652  234588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       130 lkp~nil~~~~~~~kl~df~~  150 (263)
T cd05052         130 LAARNCLVGENHLVKVADFGL  150 (263)
T ss_pred             cCcceEEEcCCCcEEeCCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.77  E-value=2.7e-20  Score=142.26  Aligned_cols=95  Identities=20%  Similarity=0.312  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++++.+..  ....+++|||+++|+|.+++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  125 (256)
T cd05114          51 KVMMKLSHPKLVQLYGVCTQ--QKPLYIVTEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRD  125 (256)
T ss_pred             HHHHHCCCCCceeEEEEEcc--CCCEEEEEEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45567789999999998865  45789999999999999988642   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       126 l~p~ni~i~~~~~~kl~d~g  145 (256)
T cd05114         126 LAARNCLVSSTGVVKVSDFG  145 (256)
T ss_pred             cCcceEEEcCCCeEEECCCC
Confidence            99999999999999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.77  E-value=7.9e-20  Score=144.73  Aligned_cols=96  Identities=19%  Similarity=0.332  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||++++++|..  ++..++++||+.+|+|.+++....  ...+++..+..++.|++.||+|||++||+|||
T Consensus        51 ~~~~~l~h~niv~~~~~~~~--~~~~~~v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrD  126 (328)
T cd08226          51 VLSHFFRHPNIMTSWTVFTT--GSWLWVISPFMAYGSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNGYIHRN  126 (328)
T ss_pred             HHHHhCCCCCcceEeeeEec--CCceEEEEecccCCCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            34556889999999999976  567899999999999999986532  22488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+|++|++
T Consensus       127 lkp~Nill~~~~~~~~~~~~  146 (328)
T cd08226         127 IKASHILISGDGLVSLSGLS  146 (328)
T ss_pred             CCHHHEEEeCCCcEEEechH
Confidence            99999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.77  E-value=4e-20  Score=143.64  Aligned_cols=97  Identities=22%  Similarity=0.243  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|++++.+...+..  .+.+++||||+.+|+|.+++...+  ...+++..+..++.|++.||.|||+++|+|||
T Consensus        52 ~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~d  127 (285)
T cd05630          52 QILEKVNSRFVVSLAYAYET--KDALCLVLTLMNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQERIVYRD  127 (285)
T ss_pred             HHHHhCCCCCeeeeeEEEec--CCEEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            45677889999999888865  457899999999999999886532  23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 ikp~Nil~~~~~~~~l~Dfg~  148 (285)
T cd05630         128 LKPENILLDDHGHIRISDLGL  148 (285)
T ss_pred             CCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.77  E-value=5.6e-20  Score=141.29  Aligned_cols=95  Identities=19%  Similarity=0.265  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  .+..+++|||+++++|.+++..    ...+++..+..++.|++.|+.|||++|++|||
T Consensus        58 ~~~~~l~h~~ii~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  131 (267)
T cd06645          58 IMMKDCKHSNIVAYFGSYLR--RDKLWICMEFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKGKMHRD  131 (267)
T ss_pred             HHHHhCCCCCeeeEEEEEEe--CCEEEEEEeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45667789999999998865  5678999999999999999854    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 lkp~nili~~~~~~~l~dfg~  152 (267)
T cd06645         132 IKGANILLTDNGHVKLADFGV  152 (267)
T ss_pred             CCHHHEEECCCCCEEECccee
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1026|consensus

Probab=99.77  E-value=1.9e-20  Score=156.43  Aligned_cols=100  Identities=27%  Similarity=0.305  Sum_probs=89.9

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------h----cCCchhHHHHHHHHHHHHHHH
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------K----KCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------~----~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      +.+...++|||||+|+++|..  ++-+++|+||++.|||.++|..+..      .    +.+++..+...++.||+.|+.
T Consensus       540 aeLla~l~H~nIVrLlGVC~~--~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~  617 (774)
T KOG1026|consen  540 AELLAELQHPNIVRLLGVCRE--GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGME  617 (774)
T ss_pred             HHHHHhccCCCeEEEEEEEcc--CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            467789999999999999976  6789999999999999999977541      1    233888999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||-++.+|||||-..|+||.++-+|||+|||+
T Consensus       618 YLs~~~FVHRDLATRNCLVge~l~VKIsDfGL  649 (774)
T KOG1026|consen  618 YLSSHHFVHRDLATRNCLVGENLVVKISDFGL  649 (774)
T ss_pred             HHHhCcccccchhhhhceeccceEEEeccccc
Confidence            99999999999999999999999999999985

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.77  E-value=4.5e-20  Score=141.29  Aligned_cols=96  Identities=17%  Similarity=0.171  Sum_probs=83.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.+.|||++++++.+..  +...++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        51 ~~l~~~~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~d  125 (258)
T cd05078          51 SMMSQLSHKHLVLNYGVCVC--GDESIMVQEYVKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDKGLTHGN  125 (258)
T ss_pred             HHHHhCCCCChhheeeEEEe--CCCcEEEEecCCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45567889999999998876  46789999999999999998652   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccce--------eecccccC
Q psy18117        195 ERETFLSVLGDCV--------RTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~--------~ki~D~~~  215 (215)
                      |||+|||++.++.        +|++||+.
T Consensus       126 lkp~nili~~~~~~~~~~~~~~~l~d~g~  154 (258)
T cd05078         126 VCAKNVLLIREEDRKTGNPPFIKLSDPGI  154 (258)
T ss_pred             CccceEEEecccccccCCCceEEeccccc
Confidence            9999999987764        69999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=6e-20  Score=141.80  Aligned_cols=98  Identities=19%  Similarity=0.248  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------KCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ..+..++|+|++++++.+..  +...+++|||+++|+|.+++......      ...+++..+..++.|++.||.|||++
T Consensus        61 ~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  138 (277)
T cd05032          61 SVMKEFNCHHVVRLLGVVST--GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK  138 (277)
T ss_pred             HHHHhCCCCceeEEEEEEcC--CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            44567789999999998876  46799999999999999998653211      22467889999999999999999999


Q ss_pred             Cccccccchhhhhhhccceeeccccc
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      +|+||||||+||+++.++.+||+|||
T Consensus       139 ~i~H~di~p~nill~~~~~~kl~dfg  164 (277)
T cd05032         139 KFVHRDLAARNCMVAEDLTVKIGDFG  164 (277)
T ss_pred             CccccccChheEEEcCCCCEEECCcc
Confidence            99999999999999999999999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.77  E-value=4.5e-20  Score=143.37  Aligned_cols=97  Identities=19%  Similarity=0.185  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|++++.+...+..  ++..+++|||+.+|+|.+++...  ....+++..+..++.|++.||.|||++||+|||
T Consensus        52 ~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~d  127 (285)
T cd05632          52 QILEKVNSQFVVNLAYAYET--KDALCLVLTIMNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHRENTVYRD  127 (285)
T ss_pred             HHHHHcCCcCceeEEEEEec--CCEEEEEEEeccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            56677889999999888765  46789999999999999888542  233599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       128 ikp~Nili~~~~~~kl~Dfg~  148 (285)
T cd05632         128 LKPENILLDDYGHIRISDLGL  148 (285)
T ss_pred             CCHHHEEECCCCCEEEecCCc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.77  E-value=5.1e-20  Score=143.40  Aligned_cols=99  Identities=21%  Similarity=0.273  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .....++|+|++++++.+..  ....++||||+++++|.+++.....            ....+++..+..++.||+.|+
T Consensus        59 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al  136 (291)
T cd05094          59 ELLTNLQHEHIVKFYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM  136 (291)
T ss_pred             HHHhcCCCCCcceEEEEEcc--CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHH
Confidence            45567889999999998875  4678999999999999999965321            123478999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+|||++.++.+||+|||.
T Consensus       137 ~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~  169 (291)
T cd05094         137 VYLASQHFVHRDLATRNCLVGANLLVKIGDFGM  169 (291)
T ss_pred             HHHHhCCeeecccCcceEEEccCCcEEECCCCc
Confidence            999999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.77  E-value=7.1e-20  Score=140.22  Aligned_cols=97  Identities=20%  Similarity=0.285  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  ....+++|||+++|+|.+++...  ....+++..+..++.|++.|+.|||++||+|||
T Consensus        54 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~d  129 (261)
T cd05148          54 QALKRLRHKHLISLFAVCSV--GEPVYIITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRD  129 (261)
T ss_pred             HHHhcCCCcchhheeeeEec--CCCeEEEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            45567789999999988865  46789999999999999999652  234588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       130 l~~~nilv~~~~~~kl~d~g~  150 (261)
T cd05148         130 LAARNILVGEDLVCKVADFGL  150 (261)
T ss_pred             cCcceEEEcCCceEEEccccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.77  E-value=9.2e-20  Score=139.70  Aligned_cols=97  Identities=19%  Similarity=0.248  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  .+..+++|||+++++|.+++....  ...+++..+..++.|++.|+.|||++|++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  128 (261)
T cd05068          53 QIMKKLRHPKLIQLYAVCTL--EEPIYIVTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQNYIHRD  128 (261)
T ss_pred             HHHHHCCCCCccceeEEEec--CCCeeeeeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            45567789999999998765  467899999999999999986532  23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 l~p~Nil~~~~~~~~l~dfg~  149 (261)
T cd05068         129 LAARNVLVGENNICKVADFGL  149 (261)
T ss_pred             CCcceEEEcCCCCEEECCcce
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.77  E-value=7.6e-20  Score=139.68  Aligned_cols=99  Identities=30%  Similarity=0.371  Sum_probs=86.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-----cCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-----KCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      .....++|++++++++.+..  ...++++|||+++++|.+++......     ...+++..++.++.|++.|+.|||++|
T Consensus        48 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  125 (262)
T cd00192          48 RVMKKLGHPNVVRLLGVCTE--EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK  125 (262)
T ss_pred             HHHhhcCCCChheeeeeecC--CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            34556679999999998876  56899999999999999998764211     356999999999999999999999999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++||||||+||+++.++.+||+|||.
T Consensus       126 i~H~di~p~nili~~~~~~~l~dfg~  151 (262)
T cd00192         126 FVHRDLAARNCLVGEDLVVKISDFGL  151 (262)
T ss_pred             cccCccCcceEEECCCCcEEEccccc
Confidence            99999999999999999999999973

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.77  E-value=1.1e-19  Score=141.14  Aligned_cols=95  Identities=24%  Similarity=0.334  Sum_probs=80.8

Q ss_pred             ccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        118 KTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++||||+++++++....   ...++++|||+.+ +|.+++....  ...+++..++.++.|++.||.|+|++||+|||
T Consensus        57 ~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d  133 (288)
T cd07863          57 EAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANCIVHRD  133 (288)
T ss_pred             hhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            4457999999998875422   2357899999986 9998886522  23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       134 ikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863         134 LKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             CCHHHEEECCCCCEEECccCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.77  E-value=7.8e-20  Score=140.87  Aligned_cols=97  Identities=23%  Similarity=0.367  Sum_probs=83.4

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      ...+ +|||++++++.+..  .+..+++|||+++|+|.+++.....            ....+++..+..++.|++.|++
T Consensus        49 l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~  126 (270)
T cd05047          49 LCKLGHHPNIINLLGACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  126 (270)
T ss_pred             HHhhccCCCeeeEEEEEec--CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHH
Confidence            3444 79999999998876  4578999999999999999865321            1124788999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++|++||||||+|||++.++.+||+|||.
T Consensus       127 ~lH~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047         127 YLSQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             HHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            99999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.77  E-value=7e-20  Score=139.98  Aligned_cols=98  Identities=20%  Similarity=0.282  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|++++++++.+... ++..++++||+++|+|.+++...  ....+++..+..++.|++.||.|+|++||+|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  127 (256)
T cd05082          51 SVMTQLRHSNLVQLLGVIVEE-KGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRD  127 (256)
T ss_pred             HHHHhCCCCCeeeEEEEEEcC-CCceEEEEECCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            455677899999998875432 45689999999999999998652  233588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 lkp~nil~~~~~~~kl~dfg~  148 (256)
T cd05082         128 LAARNVLVSEDNVAKVSDFGL  148 (256)
T ss_pred             cchheEEEcCCCcEEecCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.76  E-value=1.1e-19  Score=141.29  Aligned_cols=101  Identities=19%  Similarity=0.320  Sum_probs=88.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++||||+++++.+.......+++||||+++++|.+++.........+++..+..++.|+++||.|||++|++|||
T Consensus        51 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~d  130 (287)
T cd06621          51 EINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRD  130 (287)
T ss_pred             HHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45567889999999998865445578999999999999998876544455689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+|||.
T Consensus       131 l~~~nil~~~~~~~~l~dfg~  151 (287)
T cd06621         131 IKPSNILLTRKGQVKLCDFGV  151 (287)
T ss_pred             CCHHHEEEecCCeEEEeeccc
Confidence            999999999999999999973

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.76  E-value=1.5e-19  Score=138.33  Aligned_cols=101  Identities=27%  Similarity=0.465  Sum_probs=89.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH-----hCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH-----SRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-----~~~  189 (215)
                      ...+.++|+|++++++.+........+++|||+++++|.+++.........+++..++.++.||+.||.|+|     +.+
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~  130 (265)
T cd08217          51 NILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT  130 (265)
T ss_pred             HHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence            456677899999999877654455688999999999999999776555567999999999999999999999     999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++||||||+||+++.++.+||+|||.
T Consensus       131 i~h~dl~p~nili~~~~~~kl~d~g~  156 (265)
T cd08217         131 VLHRDLKPANIFLDANNNVKLGDFGL  156 (265)
T ss_pred             ceecCCCHHHEEEecCCCEEEecccc
Confidence            99999999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.76  E-value=4.4e-20  Score=142.47  Aligned_cols=99  Identities=22%  Similarity=0.222  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-----cCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-----KCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      ..++.++|+|++++++.+..  ....++||||+++|+|.+++......     ...+++..+..++.|+++||.|||+++
T Consensus        60 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  137 (275)
T cd05046          60 DMFRKLSHKNVVRLLGLCRE--AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR  137 (275)
T ss_pred             HHHHhcCCcceeeeEEEECC--CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence            45667889999999998765  46789999999999999998653311     115899999999999999999999999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||||||+||+++.++.+||+|++.
T Consensus       138 i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046         138 FVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             cccCcCccceEEEeCCCcEEEccccc
Confidence            99999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.76  E-value=1.1e-19  Score=139.26  Aligned_cols=97  Identities=18%  Similarity=0.264  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|+|++++++.+..  .+..+++|||+++|+|.+++....  ...+++..+..++.|+++||+|||+++++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~d  128 (261)
T cd05072          53 NLMKTLQHDKLVRLYAVVTK--EEPIYIITEYMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD  128 (261)
T ss_pred             HHHHhCCCCCeeeEEEEEcC--CCCcEEEEecCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            45567889999999988765  567899999999999999986532  33578889999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 l~p~nili~~~~~~~l~dfg~  149 (261)
T cd05072         129 LRAANVLVSESLMCKIADFGL  149 (261)
T ss_pred             cchhhEEecCCCcEEECCCcc
Confidence            999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.76  E-value=1e-19  Score=141.68  Aligned_cols=95  Identities=24%  Similarity=0.346  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.+.|||++++++.+..  ++.+++||||+++++|.+++..    ...+++..+..++.|+++||.|||++||+|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~d  126 (290)
T cd05580          53 RILQSIRHPFLVNLYGSFQD--DSNLYLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRD  126 (290)
T ss_pred             HHHHhCCCCCccceeeEEEc--CCeEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            45667789999999998876  5678999999999999999865    24689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       127 l~p~nili~~~~~~kl~dfg~  147 (290)
T cd05580         127 LKPENLLLDSDGYIKITDFGF  147 (290)
T ss_pred             CCHHHEEECCCCCEEEeeCCC
Confidence            999999999999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.76  E-value=7.2e-20  Score=143.95  Aligned_cols=96  Identities=24%  Similarity=0.388  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|+|++.+++.+..  .+..+++|||+++|+|.+++....  ...+++..+..++.|+++||.|||+++|+|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~d  126 (314)
T cd08216          51 ITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYGSCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKGFIHRS  126 (314)
T ss_pred             HHHHhcCCcchhhhhheeec--CCeEEEEEeccCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45567789999999998876  467899999999999999987532  23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+||+
T Consensus       127 lk~~Nili~~~~~~kl~d~~  146 (314)
T cd08216         127 VKASHILLSGDGKVVLSGLR  146 (314)
T ss_pred             CCcceEEEecCCceEEecCc
Confidence            99999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.76  E-value=5.5e-20  Score=143.57  Aligned_cols=99  Identities=18%  Similarity=0.251  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------cCCchhHHHHHHHHHHHHHHHHHHh
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------KCHLAECLVWSYFRQIAAALQYVHS  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------~~~~~~~~~~~~~~ql~~~l~~lH~  187 (215)
                      ..++.++|+|++++++.+..  ++..+++|||+++|+|.+++......       ...+++..+..++.|++.|++|||+
T Consensus        71 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~  148 (296)
T cd05095          71 KIMSRLKDPNIIRLLAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS  148 (296)
T ss_pred             HHHHhCCCCCcceEEEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            45567889999999998866  46789999999999999998653211       1236778899999999999999999


Q ss_pred             CCccccccchhhhhhhccceeecccccC
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|++||||||+|||++.++.+||+|||.
T Consensus       149 ~~i~H~dlkp~Nili~~~~~~~l~dfg~  176 (296)
T cd05095         149 LNFVHRDLATRNCLVGKNYTIKIADFGM  176 (296)
T ss_pred             CCeecccCChheEEEcCCCCEEeccCcc
Confidence            9999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.76  E-value=1.2e-19  Score=141.69  Aligned_cols=93  Identities=22%  Similarity=0.375  Sum_probs=81.4

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      +|||++++++.+..  ....++++||+++|+|.+++.....            ....+++..+..++.|++.||+|||++
T Consensus        61 ~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~  138 (297)
T cd05089          61 HHPNIINLLGACEN--RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK  138 (297)
T ss_pred             CCCchhheEEEEcc--CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            69999999998865  4579999999999999999865321            112488899999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       139 ~ivH~dlkp~Nill~~~~~~kl~dfg~  165 (297)
T cd05089         139 QFIHRDLAARNVLVGENLASKIADFGL  165 (297)
T ss_pred             CcccCcCCcceEEECCCCeEEECCcCC
Confidence            999999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.76  E-value=6.9e-20  Score=142.04  Aligned_cols=99  Identities=24%  Similarity=0.256  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-------------hcCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-------------KKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-------------~~~~~~~~~~~~~~~ql~~~  181 (215)
                      ...+.++|||++++++.+..  +...+++|||+++|+|.+++.....             .+..+++..+..++.|++.|
T Consensus        59 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  136 (283)
T cd05090          59 SLMAELHHPNIVCLLGVVTQ--EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG  136 (283)
T ss_pred             HHHhhCCCCCeeeEEEEEec--CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            45677889999999998765  4678999999999999999854210             12347888999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||++||+||||||+|||++.++.+||+|||.
T Consensus       137 l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~  170 (283)
T cd05090         137 MEYLSSHFFVHKDLAARNILIGEQLHVKISDLGL  170 (283)
T ss_pred             HHHHHhcCeehhccccceEEEcCCCcEEeccccc
Confidence            9999999999999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.76  E-value=1.1e-19  Score=144.78  Aligned_cols=95  Identities=25%  Similarity=0.363  Sum_probs=81.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++....    ....++++|++ +++|.+++..     ..+++..++.++.|++.||.|||++||
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~i  139 (343)
T cd07878          66 RLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSAGI  139 (343)
T ss_pred             HHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            5667889999999999886422    13467889988 4599887742     359999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       140 vHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878         140 IHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             ecccCChhhEEECCCCCEEEcCCcc
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.5e-20  Score=141.58  Aligned_cols=96  Identities=25%  Similarity=0.357  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++.+.+..  +...++||||+++++|.+++...   +..+++..+..++.|++.|+.|||++||+|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  128 (280)
T cd06611          54 DILSECKHPNIVGLYEAYFY--ENKLWILIEFCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRD  128 (280)
T ss_pred             HHHHhCCCCceeEEEEEEec--CCeEEEEeeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45667889999999999876  56789999999999999998653   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 l~p~nili~~~~~~~l~d~g~  149 (280)
T cd06611         129 LKAGNILLTLDGDVKLADFGV  149 (280)
T ss_pred             CChhhEEECCCCCEEEccCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.76  E-value=4.9e-20  Score=143.38  Aligned_cols=99  Identities=23%  Similarity=0.323  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------------hcCCchhHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------------KKCHLAECLVWSY  174 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------------~~~~~~~~~~~~~  174 (215)
                      ..+..++|||++++++.+..  ++..++++||+.+|+|.+++.....                    ....+++..+..+
T Consensus        55 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  132 (290)
T cd05045          55 NLLKQVNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISF  132 (290)
T ss_pred             HHHhhCCCCCEeeEEEEEec--CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHH
Confidence            44567789999999998765  4678999999999999999865321                    1124788899999


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        175 FRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       175 ~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|++.||.|||+++++||||||+|||+++++.+||+|||.
T Consensus       133 ~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~  173 (290)
T cd05045         133 AWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGL  173 (290)
T ss_pred             HHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccc
Confidence            99999999999999999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.76  E-value=1.1e-19  Score=142.54  Aligned_cols=97  Identities=24%  Similarity=0.322  Sum_probs=83.6

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      ...+ +|||++++.+.+..  ....++||||+++|+|.+++.....            ....++...+..++.|++.||+
T Consensus        77 l~~l~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~  154 (307)
T cd05098          77 MKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGME  154 (307)
T ss_pred             HHHhcCCCCEeeEEEEEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHH
Confidence            3445 69999999998876  4578999999999999999975321            1124788899999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++|++||||||+||+++.++.+||+|||.
T Consensus       155 ~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~  186 (307)
T cd05098         155 YLASKKCIHRDLAARNVLVTEDNVMKIADFGL  186 (307)
T ss_pred             HHHHCCcccccccHHheEEcCCCcEEECCCcc
Confidence            99999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.76  E-value=1.3e-19  Score=145.49  Aligned_cols=94  Identities=26%  Similarity=0.388  Sum_probs=80.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+.+.++|||++.+++++....    ...+++||||+++ +|.+.+..      .+++..+..++.|++.||.|||++||
T Consensus        75 ~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~i  147 (364)
T cd07875          75 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGI  147 (364)
T ss_pred             HHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            4567789999999998875422    1346899999987 78777642      37889999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       148 vH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         148 IHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             ecCCCCHHHEEECCCCcEEEEeCCC
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.1e-20  Score=140.30  Aligned_cols=95  Identities=21%  Similarity=0.268  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +..+++++||+++++|.+++..    ...+++..+..++.|++.|+.|||++||+|||
T Consensus        56 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  129 (263)
T cd06625          56 QLLKNLQHERIVQYYGCLRD--DETLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSNMIVHRD  129 (263)
T ss_pred             HHHHhCCCCCeeeeEEEEcc--CCeEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45667889999999999876  4589999999999999999864    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       130 l~p~nilv~~~~~~~l~dfg~  150 (263)
T cd06625         130 IKGANILRDSAGNVKLGDFGA  150 (263)
T ss_pred             CCHHHEEEcCCCCEEEeeccc
Confidence            999999999999999999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.76  E-value=9.2e-20  Score=157.59  Aligned_cols=99  Identities=21%  Similarity=0.262  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------cCCchhHHHHHHHHHHHHHHHHHHh
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------KCHLAECLVWSYFRQIAAALQYVHS  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------~~~~~~~~~~~~~~ql~~~l~~lH~  187 (215)
                      .+...++|||++++++.+..  ++..+++|||+++|+|.+++......       ....+...+..++.|+++||+|||+
T Consensus        54 ~ILs~L~HPNIVkl~~v~~d--~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs  131 (932)
T PRK13184         54 KIAADLIHPGIVPVYSICSD--GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS  131 (932)
T ss_pred             HHHHhCCCcCcCeEEEEEee--CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH
Confidence            45667889999999998865  46789999999999999998653211       1234556788999999999999999


Q ss_pred             CCccccccchhhhhhhccceeecccccC
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+||||||+|||++.++.+||+|||.
T Consensus       132 ~GIIHRDLKPeNILLd~dg~vKLiDFGL  159 (932)
T PRK13184        132 KGVLHRDLKPDNILLGLFGEVVILDWGA  159 (932)
T ss_pred             CCccccCCchheEEEcCCCCEEEEecCc
Confidence            9999999999999999999999999984

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=8e-20  Score=143.48  Aligned_cols=95  Identities=20%  Similarity=0.265  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      .++..++||||+++++.+..  ++.++++|||+++++|.+++...    ..+++..+..++.|+++||.|||+ .+++||
T Consensus        51 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ey~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~  124 (308)
T cd06615          51 KVLHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLREKHKIMHR  124 (308)
T ss_pred             HHHHhCCCCCCCeEEEEEee--CCEEEEEeeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhhCCEEEC
Confidence            45667899999999999876  56899999999999999998652    358999999999999999999997 699999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       125 dl~p~nil~~~~~~~~l~dfg~  146 (308)
T cd06615         125 DVKPSNILVNSRGEIKLCDFGV  146 (308)
T ss_pred             CCChHHEEEecCCcEEEccCCC
Confidence            9999999999999999999973

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0614|consensus

Probab=99.76  E-value=3.9e-19  Score=141.50  Aligned_cols=95  Identities=15%  Similarity=0.211  Sum_probs=87.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++...+.|+||+++..|.+  +..+|++||-|-||+|...+..    ++.+++..++-+..-+++|++|||++|||.||
T Consensus       472 ~Im~~~~s~fIvrLYrTfrd--~kyvYmLmEaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRD  545 (732)
T KOG0614|consen  472 NIMMECRSDFIVRLYRTFRD--SKYVYMLMEACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRKGIIYRD  545 (732)
T ss_pred             HHHHhcCchHHHHHHHHhcc--chhhhhhHHhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhcCceecc
Confidence            45567779999999999976  6899999999999999999855    66899999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|+|++.+|-+||.|||+
T Consensus       546 LKPENllLd~~Gy~KLVDFGF  566 (732)
T KOG0614|consen  546 LKPENLLLDNRGYLKLVDFGF  566 (732)
T ss_pred             CChhheeeccCCceEEeehhh
Confidence            999999999999999999984

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.76  E-value=1.3e-19  Score=142.51  Aligned_cols=100  Identities=27%  Similarity=0.431  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKK-CHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..++|||++++++.+.......+++||||+++ +|.+++....... ..+++..++.++.|++.||.|||+++|+||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~  132 (316)
T cd07842          54 ALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHR  132 (316)
T ss_pred             HHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence            45677889999999999987544679999999986 8888876543322 368999999999999999999999999999


Q ss_pred             ccchhhhhhhc----cceeecccccC
Q psy18117        194 GERETFLSVLG----DCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~----~~~~ki~D~~~  215 (215)
                      ||||+||+++.    ++.+||+|||.
T Consensus       133 dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842         133 DLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             CCCHHHEEEcCCCCccceEEECCCcc
Confidence            99999999999    89999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.76  E-value=1.8e-19  Score=139.52  Aligned_cols=96  Identities=17%  Similarity=0.277  Sum_probs=84.5

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRGE  195 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrDi  195 (215)
                      .+..+|||++++++.+..  +..++++|||+++ +|.+++.........+++..++.++.|++.||.|||++ +++||||
T Consensus        54 ~~~~~~~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl  130 (283)
T cd06617          54 MRSVDCPYTVTFYGALFR--EGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV  130 (283)
T ss_pred             HHHcCCCCeeeeeEEEec--CCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence            456789999999998875  4679999999985 99988876444445799999999999999999999997 9999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||+++.++.+||+|||.
T Consensus       131 kp~nil~~~~~~~kl~dfg~  150 (283)
T cd06617         131 KPSNVLINRNGQVKLCDFGI  150 (283)
T ss_pred             CHHHEEECCCCCEEEeeccc
Confidence            99999999999999999973

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.76  E-value=1.3e-19  Score=141.37  Aligned_cols=94  Identities=21%  Similarity=0.402  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ++..+++|||+++++|.+++..     ..+++..+..++.||+.|+.|||+++|+|||
T Consensus        71 ~~l~~l~h~~ii~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d  143 (292)
T cd06658          71 VIMRDYHHENVVDMYNSYLV--GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQGVIHRD  143 (292)
T ss_pred             HHHHhCCCCcHHHHHHheec--CCeEEEEEeCCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence            44567789999999999876  5688999999999999998743     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       144 lkp~Nill~~~~~~kL~dfg~  164 (292)
T cd06658         144 IKSDSILLTSDGRIKLSDFGF  164 (292)
T ss_pred             CCHHHEEEcCCCCEEEccCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG1094|consensus

Probab=99.76  E-value=1.9e-19  Score=145.33  Aligned_cols=97  Identities=24%  Similarity=0.286  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++|.++|..  ++-+++|+||++.|||.+++..+...  .+.......++.||+.|++||.+.++||||
T Consensus       587 kiLsqLkhPNIveLvGVC~~--DePicmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~nfVHrd  662 (807)
T KOG1094|consen  587 KILSRLKHPNIVELLGVCVQ--DDPLCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESLNFVHRD  662 (807)
T ss_pred             HHHhccCCCCeeEEEeeeec--CCchHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhhchhhcc
Confidence            66778899999999999987  57899999999999999999774221  244556677999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +-+.|+|++.++++||||||+
T Consensus       663 ~a~rNcLv~~e~~iKiadfgm  683 (807)
T KOG1094|consen  663 LATRNCLVDGEFTIKIADFGM  683 (807)
T ss_pred             ccccceeecCcccEEecCccc
Confidence            999999999999999999974

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.76  E-value=1.2e-19  Score=142.26  Aligned_cols=94  Identities=21%  Similarity=0.308  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||++++++.+..  ++.+++||||+++++|.+++..    ...+++..+..++.|++.|+.|||+++++|||
T Consensus        53 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  126 (305)
T cd05609          53 DILTFAENPFVVSMFCSFET--KRHLCMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNYGIVHRD  126 (305)
T ss_pred             HHHHhCCCCCeeeeEEEEec--CCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            34567789999999988865  4578999999999999999854    23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       127 l~p~NIll~~~~~~~l~dfg  146 (305)
T cd05609         127 LKPDNLLITSMGHIKLTDFG  146 (305)
T ss_pred             CchHHEEECCCCCEEEeeCC
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.76  E-value=8.7e-20  Score=140.06  Aligned_cols=99  Identities=33%  Similarity=0.555  Sum_probs=88.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|++++++++.+..  ++..+++|||+++|+|..++......+..+++..++.++.|++.|+.|||++||+|||
T Consensus        54 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  131 (267)
T cd08224          54 DLLKQLDHPNVIKYLASFIE--NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRD  131 (267)
T ss_pred             HHHHhCCCCCeeeeeeeeec--CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            45567789999999999876  4678999999999999999876544455689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       132 l~p~nil~~~~~~~~l~d~~~  152 (267)
T cd08224         132 IKPANVFITATGVVKLGDLGL  152 (267)
T ss_pred             cChhhEEECCCCcEEEeccce
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.76  E-value=1.1e-19  Score=141.58  Aligned_cols=97  Identities=23%  Similarity=0.332  Sum_probs=84.1

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH------------HhcCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      ...+ +|+|++++++.+..  +..++++|||+++|+|..++....            .....+++..+..++.|++.||+
T Consensus        69 l~~l~~h~~i~~~~~~~~~--~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~  146 (293)
T cd05053          69 MKMIGKHKNIINLLGVCTQ--EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGME  146 (293)
T ss_pred             HHhhcCCCCeeeEEEEEcC--CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            3445 79999999998865  467899999999999999986531            12345889999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+++|+||||||+||+++.++.+||+|||.
T Consensus       147 ~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~  178 (293)
T cd05053         147 FLASKKCIHRDLAARNVLVTEDHVMKIADFGL  178 (293)
T ss_pred             HHHHCCccccccceeeEEEcCCCeEEeCcccc
Confidence            99999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.76  E-value=9.1e-20  Score=140.11  Aligned_cols=96  Identities=20%  Similarity=0.308  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++.+.+..  .+..+++|||+++|+|.+++...   ...+++..+..++.|++.|+.|||+++|+|||
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~--~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~d  131 (266)
T cd05033          57 SIMGQFDHPNIIRLEGVVTK--SRPVMIITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRD  131 (266)
T ss_pred             HHHHhCCCCCcceEeEEEec--CCceEEEEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45667789999999998765  46789999999999999998652   23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       132 i~p~nili~~~~~~~l~dfg~  152 (266)
T cd05033         132 LAARNILVNSNLVCKVSDFGL  152 (266)
T ss_pred             CCcceEEEcCCCCEEECccch
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.76  E-value=1.6e-19  Score=138.14  Aligned_cols=94  Identities=19%  Similarity=0.315  Sum_probs=82.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..+.|||++++++.+..   +..++||||+++|+|.+++..    ...+++..+..++.|++.|++|+|++||+|||
T Consensus        48 ~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d  120 (257)
T cd05116          48 NVMQQLDNPYIVRMIGICEA---ESWMLVMELAELGPLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETNFVHRD  120 (257)
T ss_pred             HHHHhCCCCCcceEEEEEcC---CCcEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            34566789999999887643   467899999999999999854    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       121 lkp~nill~~~~~~kl~Dfg~  141 (257)
T cd05116         121 LAARNVLLVTQHYAKISDFGL  141 (257)
T ss_pred             cchhhEEEcCCCeEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.76  E-value=9.2e-20  Score=140.28  Aligned_cols=96  Identities=20%  Similarity=0.315  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  +...+++|||+++|+|.+++...   ...+++..+..++.|++.|+.|||++|++|||
T Consensus        57 ~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~d  131 (269)
T cd05065          57 SIMGQFDHPNIIHLEGVVTK--SRPVMIITEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRD  131 (269)
T ss_pred             HHHHhCCCcCcceEEEEECC--CCceEEEEecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence            44567789999999998765  56789999999999999998642   33588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~nili~~~~~~kl~dfg~  152 (269)
T cd05065         132 LAARNILVNSNLVCKVSDFGL  152 (269)
T ss_pred             cChheEEEcCCCcEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.76  E-value=6.5e-20  Score=143.48  Aligned_cols=95  Identities=26%  Similarity=0.357  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++||||+++++.+..  .+..++||||+++ +|.+++...   +..+++..++.++.|+++||.|||++||+|||
T Consensus        56 ~~l~~l~h~nI~~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d  129 (301)
T cd07873          56 SLLKDLKHANIVTLHDIIHT--EKSLTLVFEYLDK-DLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD  129 (301)
T ss_pred             HHHHhcCCCCcceEEEEEec--CCeEEEEEecccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            45667889999999999876  4678999999985 999888542   33588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       130 lkp~Nil~~~~~~~kl~dfg~  150 (301)
T cd07873         130 LKPQNLLINERGELKLADFGL  150 (301)
T ss_pred             CCHHHEEECCCCcEEECcCcc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.76  E-value=1e-19  Score=142.11  Aligned_cols=94  Identities=23%  Similarity=0.366  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.+.|+|++++.+.+..  +...++||||+++++|.+++..     ..+++.++..++.|++.||.|||++||+|||
T Consensus        69 ~~l~~~~h~~v~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d  141 (296)
T cd06654          69 LVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (296)
T ss_pred             HHHHhCCCCCEeeEEEEEEe--CCEEEEeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567789999999998875  4688999999999999998853     2478999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       142 Lkp~Nill~~~~~~kl~dfg~  162 (296)
T cd06654         142 IKSDNILLGMDGSVKLTDFGF  162 (296)
T ss_pred             CCHHHEEEcCCCCEEECcccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.76  E-value=1.2e-19  Score=140.65  Aligned_cols=99  Identities=21%  Similarity=0.275  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH------------HhcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .+...++||||+++++.+..  ....++++||+.+++|.+++....            ..+..+++..+..++.|++.||
T Consensus        60 ~~~~~l~h~~iv~~~~~~~~--~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL  137 (283)
T cd05091          60 MMRSRLQHPNIVCLLGVVTK--EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM  137 (283)
T ss_pred             HHHhcCCCCCcCeEEEEEcC--CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            34567889999999998876  456889999999999999985321            1123478888999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|+|++||+||||||+|||++.++.+||+|||.
T Consensus       138 ~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~  170 (283)
T cd05091         138 EFLSSHHVVHKDLATRNVLVFDKLNVKISDLGL  170 (283)
T ss_pred             HHHHHcCccccccchhheEecCCCceEeccccc
Confidence            999999999999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.9e-19  Score=138.56  Aligned_cols=101  Identities=20%  Similarity=0.282  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECR--QKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ..++.++|||++++++.+.....    ...++++||+++|+|..++....  .....+++..+..++.|++.||.|||++
T Consensus        53 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~  132 (273)
T cd05035          53 ACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR  132 (273)
T ss_pred             HHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567889999999887654221    23689999999999999986533  1223689999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+||||||+||++++++.+||+|||.
T Consensus       133 ~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035         133 NFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             CeeccccchheEEECCCCeEEECCccc
Confidence            999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.76  E-value=1.3e-19  Score=139.25  Aligned_cols=94  Identities=28%  Similarity=0.363  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++.+.+..  ....++++||+++++|.+++..    ...+++..+..++.|++.|++|+|++|++|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d  131 (267)
T cd06628          58 ALLKELQHENIVQYLGSSLD--ADHLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRD  131 (267)
T ss_pred             HHHHhcCCCCeeeEEEEEEe--CCccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            45677889999999998765  5688999999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       132 i~p~nil~~~~~~~~l~dfg  151 (267)
T cd06628         132 IKGANILVDNKGGIKISDFG  151 (267)
T ss_pred             CCHHHEEEcCCCCEEecccC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.76  E-value=1.2e-19  Score=140.56  Aligned_cols=99  Identities=24%  Similarity=0.227  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .....++|||++++++.+..  ....+++|||+++|+|.+++.....            ....+++..+..++.|++.||
T Consensus        60 ~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al  137 (283)
T cd05048          60 ELMSDLQHPNIVCLLGVCTK--EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM  137 (283)
T ss_pred             HHHHhcCCcccceEEEEEcC--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence            44567789999999998865  4678899999999999999865311            013578889999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||++|++||||||+||+++.++.+||+|||.
T Consensus       138 ~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~  170 (283)
T cd05048         138 EYLSSHHFVHRDLAARNCLVGEGLTVKISDFGL  170 (283)
T ss_pred             HHHHhCCeeccccccceEEEcCCCcEEECCCcc
Confidence            999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.76  E-value=2.3e-19  Score=139.19  Aligned_cols=99  Identities=20%  Similarity=0.356  Sum_probs=84.2

Q ss_pred             CccC-CCcchhhhhhhhcCC---chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        117 DKTL-HHPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      ...+ +|||++++++.+...   .+...+++|||+++|+|.+++......+..+++..++.++.|+++|+.|||+++|+|
T Consensus        68 l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H  147 (286)
T cd06638          68 LKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIH  147 (286)
T ss_pred             HHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            3444 699999999877421   235689999999999999988654333456899999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+||+++.++.+||+|||.
T Consensus       148 ~dlkp~nili~~~~~~kl~dfg~  170 (286)
T cd06638         148 RDVKGNNILLTTEGGVKLVDFGV  170 (286)
T ss_pred             cCCCHHhEEECCCCCEEEccCCc
Confidence            99999999999999999999974

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.75  E-value=1.2e-19  Score=141.66  Aligned_cols=99  Identities=19%  Similarity=0.227  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------hcCCchhHHHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------KKCHLAECLVWSYFRQIAAALQYVH  186 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------~~~~~~~~~~~~~~~ql~~~l~~lH  186 (215)
                      .....++|+|++++++.+..  .+..++||||+++++|.+++.....        ....+++..+..++.|++.|+.|||
T Consensus        69 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  146 (295)
T cd05097          69 KIMSRLKNPNIIRLLGVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA  146 (295)
T ss_pred             HHHHhCCCCCcCeEEEEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence            45667889999999998865  5678999999999999999864221        1123678889999999999999999


Q ss_pred             hCCccccccchhhhhhhccceeecccccC
Q psy18117        187 SRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++|++||||||+||+++.++.+||+|||.
T Consensus       147 ~~~i~H~dlkp~Nill~~~~~~kl~dfg~  175 (295)
T cd05097         147 SLNFVHRDLATRNCLVGNHYTIKIADFGM  175 (295)
T ss_pred             hcCeeccccChhhEEEcCCCcEEeccccc
Confidence            99999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.75  E-value=8.1e-20  Score=141.63  Aligned_cols=97  Identities=30%  Similarity=0.386  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  +...++||||++ ++|.+++.... ....+++..++.++.|+++||.|||++||+|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  126 (285)
T cd07861          51 SLLKELQHPNIVCLQDVLMQ--ESRLYLIFEFLS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHSRRVLHRD  126 (285)
T ss_pred             HHHHhcCCCCEeeeEEEEee--CCeEEEEEecCC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            45667789999999999876  568899999998 48988875432 124689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       127 l~p~nil~~~~~~~~l~dfg~  147 (285)
T cd07861         127 LKPQNLLIDNKGVIKLADFGL  147 (285)
T ss_pred             CCHHHEEEcCCCcEEECcccc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.75  E-value=1.4e-19  Score=139.15  Aligned_cols=95  Identities=20%  Similarity=0.281  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++++.+..  ++..++||||+++++|.+++..    +..+++..+..++.|+++|+.|||++||+|||
T Consensus        58 ~~l~~~~h~~ii~~~~~~~~--~~~~~iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  131 (267)
T cd06646          58 FMVKECKHCNIVAYFGSYLS--REKLWICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKGKMHRD  131 (267)
T ss_pred             HHHHhcCCCCeeeeeEEEEe--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            45567889999999998875  4678999999999999998854    33689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+||+++.++.+||+|||.
T Consensus       132 l~p~nill~~~~~~~l~dfg~  152 (267)
T cd06646         132 IKGANILLTDNGDVKLADFGV  152 (267)
T ss_pred             CCHHHEEECCCCCEEECcCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.75  E-value=2.3e-19  Score=140.61  Aligned_cols=95  Identities=23%  Similarity=0.309  Sum_probs=83.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...+.|||++++++.+..   ...++++||+++|+|.+++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus        61 ~~~~~l~h~niv~~~~~~~~---~~~~~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d  134 (303)
T cd05110          61 LIMASMDHPHLVRLLGVCLS---PTIQLVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD  134 (303)
T ss_pred             HHHHhCCCCCcccEEEEEcC---CCceeeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccc
Confidence            44567789999999998764   3467899999999999998642   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 ikp~Nill~~~~~~kL~Dfg~  155 (303)
T cd05110         135 LAARNVLVKSPNHVKITDFGL  155 (303)
T ss_pred             cccceeeecCCCceEEccccc
Confidence            999999999999999999983

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.75  E-value=1.2e-19  Score=140.69  Aligned_cols=95  Identities=28%  Similarity=0.384  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+.+  ....++++||+++ +|.+++...   +..+++..++.++.||++||.|||++||+|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d  124 (284)
T cd07839          51 CLLKELKHKNIVRLYDVLHS--DKKLTLVFEYCDQ-DLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRD  124 (284)
T ss_pred             HHHHhcCCCCeeeHHHHhcc--CCceEEEEecCCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            45677899999999999876  5689999999985 888877542   34589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       125 l~~~nil~~~~~~~~l~dfg~  145 (284)
T cd07839         125 LKPQNLLINKNGELKLADFGL  145 (284)
T ss_pred             CCHHHEEEcCCCcEEECccch
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0690|consensus

Probab=99.75  E-value=5.4e-20  Score=139.43  Aligned_cols=94  Identities=26%  Similarity=0.335  Sum_probs=86.4

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      .++..+||++..|.-.|..  .+++++||||+.||+|.-.+....    .++|..++-|-..|+.||.|||+++||.||+
T Consensus       221 VL~~~~HPFLt~LKYsFQt--~drlCFVMeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDl  294 (516)
T KOG0690|consen  221 VLQNCRHPFLTSLKYSFQT--QDRLCFVMEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSRNIVYRDL  294 (516)
T ss_pred             HHHhccCcHHHHhhhhhcc--CceEEEEEEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhCCeeeeec
Confidence            4568889999999999977  579999999999999999886532    5999999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.+|+|+|.+|++||+|||+
T Consensus       295 KLENLlLDkDGHIKitDFGL  314 (516)
T KOG0690|consen  295 KLENLLLDKDGHIKITDFGL  314 (516)
T ss_pred             hhhhheeccCCceEeeeccc
Confidence            99999999999999999985

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.75  E-value=2e-19  Score=138.35  Aligned_cols=96  Identities=18%  Similarity=0.245  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|+|++++.+.+..  .+..++||||+++++|.+++..   +...+++..+..++.|++.|++|||++|++|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  132 (268)
T cd05063          58 SIMGQFSHHNIIRLEGVVTK--FKPAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRD  132 (268)
T ss_pred             HHHhcCCCCCeeEEEEEEcc--CCCcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            44567789999999998876  4678999999999999999854   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       133 lkp~Nili~~~~~~kl~dfg~  153 (268)
T cd05063         133 LAARNILVNSNLECKVSDFGL  153 (268)
T ss_pred             cchhhEEEcCCCcEEECCCcc
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0193|consensus

Probab=99.75  E-value=1.3e-19  Score=146.67  Aligned_cols=95  Identities=17%  Similarity=0.208  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...++.+|.||+-+++++..+   .+.+|+-+|+|-+|+.+|.....   .|......+|+.|+++|+.|||.++|||||
T Consensus       440 a~lkkTRH~NIlLFMG~~~~p---~~AIiTqwCeGsSLY~hlHv~et---kfdm~~~idIAqQiaqGM~YLHAK~IIHrD  513 (678)
T KOG0193|consen  440 AVLKKTRHENILLFMGACMNP---PLAIITQWCEGSSLYTHLHVQET---KFDMNTTIDIAQQIAQGMDYLHAKNIIHRD  513 (678)
T ss_pred             HHHhhcchhhheeeehhhcCC---ceeeeehhccCchhhhhccchhh---hhhHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence            667889999999999999764   34999999999999999976544   499999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||..||++++++.|||.|||+
T Consensus       514 LKSnNIFl~~~~kVkIgDFGL  534 (678)
T KOG0193|consen  514 LKSNNIFLHEDLKVKIGDFGL  534 (678)
T ss_pred             ccccceEEccCCcEEEecccc
Confidence            999999999999999999985

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.75  E-value=1.3e-19  Score=140.14  Aligned_cols=99  Identities=21%  Similarity=0.242  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH----------HhcCCchhHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR----------QKKCHLAECLVWSYFRQIAAALQY  184 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~----------~~~~~~~~~~~~~~~~ql~~~l~~  184 (215)
                      .+++.++|+|++++++.+..  ....+++|||+++|+|.+++....          .....+++..+..++.|++.|+.|
T Consensus        60 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~  137 (280)
T cd05049          60 ELLTNFQHENIVKFYGVCTE--GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVY  137 (280)
T ss_pred             HHHHhcCCCCchheeeEEec--CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence            45567889999999998876  467999999999999999996532          122347889999999999999999


Q ss_pred             HHhCCccccccchhhhhhhccceeecccccC
Q psy18117        185 VHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       185 lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|++|++||||||+||+++.++.+||+|||.
T Consensus       138 lH~~~i~h~dlkp~nili~~~~~~kl~d~g~  168 (280)
T cd05049         138 LASQHFVHRDLATRNCLVGYDLVVKIGDFGM  168 (280)
T ss_pred             HhhCCeeccccccceEEEcCCCeEEECCccc
Confidence            9999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.75  E-value=1.6e-19  Score=137.82  Aligned_cols=96  Identities=23%  Similarity=0.373  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++.+.+..   +..+++|||+.+|+|.+++....  ...+++..+..++.|++.|+.|+|++|++|||
T Consensus        51 ~~l~~~~~~~i~~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~d  125 (254)
T cd05083          51 AVMTKLHHKNLVRLLGVILH---NGLYIVMELMSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKKLVHRD  125 (254)
T ss_pred             HHHHhCCCCCcCeEEEEEcC---CCcEEEEECCCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            44567889999999988754   35789999999999999986532  33588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~p~nili~~~~~~kl~Dfg~  146 (254)
T cd05083         126 LAARNILVSEDGVAKVSDFGL  146 (254)
T ss_pred             cCcceEEEcCCCcEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.75  E-value=2.8e-19  Score=136.71  Aligned_cols=95  Identities=24%  Similarity=0.366  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +...++|+||+.+++|.+++...    ..+++..+..++.|+++||.|||+++++|+|
T Consensus        52 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~d  125 (258)
T cd05578          52 RILQELNHPFLVNLWYSFQD--EENMYLVVDLLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSKGIIHRD  125 (258)
T ss_pred             HHHHhCCCCChHHHHHhhcC--CCeEEEEEeCCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            45567889999999999876  56799999999999999998652    4689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+||+.
T Consensus       126 l~~~nil~~~~~~~~l~d~~~  146 (258)
T cd05578         126 IKPDNILLDEQGHVHITDFNI  146 (258)
T ss_pred             CCHHHeEEcCCCCEEEeeccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.75  E-value=6.6e-20  Score=140.10  Aligned_cols=95  Identities=25%  Similarity=0.348  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++||||+++.+.+..  ....+++|||+++++|.+++..    ...+++..+..++.|+++||.+||+++|+|||
T Consensus        50 ~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d  123 (260)
T PF00069_consen   50 KILRRLRHPNIVQILDVFQD--DNYLYIVMEYCPGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSKGIVHRD  123 (260)
T ss_dssp             HHHHHHTBTTBCHEEEEEEE--SSEEEEEEEEETTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             hccccccccccccccccccc--cccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence            45566689999999999876  5678899999999999999972    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       124 ikp~NIl~~~~~~~~l~Dfg~  144 (260)
T PF00069_consen  124 IKPENILLDENGEVKLIDFGS  144 (260)
T ss_dssp             BSGGGEEESTTSEEEESSGTT
T ss_pred             ccccccccccccccccccccc
Confidence            999999999999999999983

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.75  E-value=1.6e-19  Score=137.97  Aligned_cols=96  Identities=23%  Similarity=0.305  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..   ...++++||+++|+|.+++.....  ..+++..++.++.|+++||.|+|++|++|||
T Consensus        48 ~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  122 (257)
T cd05040          48 AIMHSLDHENLIRLYGVVLT---HPLMMVTELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESKRFIHRD  122 (257)
T ss_pred             HHHhhcCCCCccceeEEEcC---CeEEEEEEecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            45667889999999988765   578899999999999999865321  3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       123 i~p~nil~~~~~~~kl~dfg~  143 (257)
T cd05040         123 LAARNILLASDDKVKIGDFGL  143 (257)
T ss_pred             cCcccEEEecCCEEEeccccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.75  E-value=1.5e-19  Score=138.82  Aligned_cols=97  Identities=21%  Similarity=0.219  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|||++++.+.+.......++++|||+++++|.+++..    ...+++..+..++.|++.||.|||+++|+|||
T Consensus        56 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d  131 (265)
T cd06652          56 QLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSNMIVHRD  131 (265)
T ss_pred             HHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            45667789999999988765434567899999999999999854    23578899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~nil~~~~~~~~l~Dfg~  152 (265)
T cd06652         132 IKGANILRDSVGNVKLGDFGA  152 (265)
T ss_pred             CCHHHEEecCCCCEEECcCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.75  E-value=1.3e-19  Score=138.46  Aligned_cols=97  Identities=22%  Similarity=0.337  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|+|++++++.+..  ....++||||+++++|.+++....  ...+++..++.++.|++.|+.|||++|++|||
T Consensus        52 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d  127 (256)
T cd05039          52 SVMTTLRHPNLVQLLGVVLQ--GNPLYIVTEYMAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKNFVHRD  127 (256)
T ss_pred             HHHHhcCCcceeeeEEEEcC--CCCeEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCccchh
Confidence            45567789999999998875  567899999999999999986522  23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 i~p~Nili~~~~~~~l~d~g~  148 (256)
T cd05039         128 LAARNVLVSEDLVAKVSDFGL  148 (256)
T ss_pred             cccceEEEeCCCCEEEccccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.75  E-value=1.1e-19  Score=138.88  Aligned_cols=96  Identities=25%  Similarity=0.346  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  .+.++++|||+++|+|.+++....  ...+++..+..++.|++.|+.|||++|++|||
T Consensus        51 ~~l~~~~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (256)
T cd08221          51 VILSLLQHPNIIAYYNHFMD--DNTLLIEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRD  126 (256)
T ss_pred             HHHHhCCCCCeeEEEeEEec--CCeEEEEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            45667789999999999876  567899999999999999986532  34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+||+
T Consensus       127 l~p~ni~~~~~~~~kl~d~~  146 (256)
T cd08221         127 IKTLNIFLTKAGLIKLGDFG  146 (256)
T ss_pred             CChHhEEEeCCCCEEECcCc
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.75  E-value=1.9e-19  Score=143.06  Aligned_cols=98  Identities=23%  Similarity=0.305  Sum_probs=83.0

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH----------------------------------
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ----------------------------------  161 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~----------------------------------  161 (215)
                      ...+ +|+||+++++.+... +..++++|||+++|+|.++|.....                                  
T Consensus        64 ~~~l~~h~niv~~~~~~~~~-~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (337)
T cd05054          64 LIHIGHHLNVVNLLGACTKP-GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSS  142 (337)
T ss_pred             HHhhccCcchhheeeeEecC-CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccc
Confidence            3444 799999999987653 4568899999999999999864211                                  


Q ss_pred             -----------------------hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        162 -----------------------KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       162 -----------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                                             ....+++..+..++.|+++||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~  219 (337)
T cd05054         143 ASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGL  219 (337)
T ss_pred             cccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEecccc
Confidence                                   012578899999999999999999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.75  E-value=1.6e-19  Score=138.34  Aligned_cols=97  Identities=19%  Similarity=0.210  Sum_probs=82.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+... ++..+++|||+.+|+|.+++...   ...+++..+..++.|+++||.|||+++++|||
T Consensus        48 ~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  123 (262)
T cd05058          48 IIMKDFSHPNVLSLLGICLPS-EGSPLVVLPYMKHGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKKFVHRD  123 (262)
T ss_pred             HHHccCCCCCcceEEEEeecC-CCCcEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            345678899999999876543 35678999999999999998642   22366777889999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       124 lk~~nili~~~~~~kl~dfg~  144 (262)
T cd05058         124 LAARNCMLDESFTVKVADFGL  144 (262)
T ss_pred             cCcceEEEcCCCcEEECCccc
Confidence            999999999999999999983

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.75  E-value=1.1e-19  Score=142.39  Aligned_cols=97  Identities=20%  Similarity=0.247  Sum_probs=84.5

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ...+.+ +|+|++++++.+..  .+..+++|||+.+|+|.+++...  ....+++.++..++.|++.||.|+|+++|+||
T Consensus        90 ~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~  165 (302)
T cd05055          90 KIMSHLGNHENIVNLLGACTI--GGPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLASKNCIHR  165 (302)
T ss_pred             HHHHhccCCCCcceEEEEEec--CCceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeehh
Confidence            344566 79999999998865  46789999999999999998642  22248999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       166 dlkp~Nil~~~~~~~~l~dfg~  187 (302)
T cd05055         166 DLAARNVLLTHGKIVKICDFGL  187 (302)
T ss_pred             hhccceEEEcCCCeEEECCCcc
Confidence            9999999999999999999973

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.75  E-value=1.3e-19  Score=140.28  Aligned_cols=95  Identities=19%  Similarity=0.210  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....+.|+|++.+++.+..   ...++++||+++|+|.+++...   ...+++..+..++.|++.||.|||+++|+|||
T Consensus        61 ~~l~~~~~~~i~~~~~~~~~---~~~~l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~d  134 (279)
T cd05109          61 YVMAGVGSPYVCRLLGICLT---STVQLVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRD  134 (279)
T ss_pred             HHHHhcCCCCCceEEEEEcC---CCcEEEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            34556789999999888754   3577899999999999998642   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 lkp~Nil~~~~~~~kL~dfG~  155 (279)
T cd05109         135 LAARNVLVKSPNHVKITDFGL  155 (279)
T ss_pred             cccceEEEcCCCcEEECCCCc
Confidence            999999999999999999983

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=9.3e-20  Score=151.82  Aligned_cols=98  Identities=16%  Similarity=0.232  Sum_probs=80.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH-HhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR-QKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..++||||+++++++..  .+..++++|++.+ +|..++.... ..........+..++.||+.||.|||++||+||
T Consensus       215 ~il~~l~HpnIv~l~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHr  291 (501)
T PHA03210        215 LALGRLNHENILKIEEILRS--EANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHR  291 (501)
T ss_pred             HHHHhCCCCCcCcEeEEEEE--CCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            56778899999999999876  4578899999876 8888764321 111123456788899999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       292 DLKP~NILl~~~~~vkL~DFGl  313 (501)
T PHA03210        292 DIKLENIFLNCDGKIVLGDFGT  313 (501)
T ss_pred             CCCHHHEEECCCCCEEEEeCCC
Confidence            9999999999999999999984

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.75  E-value=1.6e-19  Score=140.75  Aligned_cols=99  Identities=19%  Similarity=0.231  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-------hcCCchhHHHHHHHHHHHHHHHHHHh
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-------KKCHLAECLVWSYFRQIAAALQYVHS  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-------~~~~~~~~~~~~~~~ql~~~l~~lH~  187 (215)
                      .+...++|||++++++.+..  +...+++|||+++++|.+++.....       ....+++..++.++.|++.||.|||+
T Consensus        71 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~  148 (296)
T cd05051          71 KILSRLSDPNIARLLGVCTV--DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES  148 (296)
T ss_pred             HHHHhcCCCCEeEEEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            45567789999999998865  4688999999999999999865331       11258899999999999999999999


Q ss_pred             CCccccccchhhhhhhccceeecccccC
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+||||||+||+++.++.+||+|||.
T Consensus       149 ~~i~H~dlkp~Nili~~~~~~~l~dfg~  176 (296)
T cd05051         149 LNFVHRDLATRNCLVGKNYTIKIADFGM  176 (296)
T ss_pred             cCccccccchhceeecCCCceEEccccc
Confidence            9999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.75  E-value=1.7e-19  Score=139.62  Aligned_cols=98  Identities=22%  Similarity=0.295  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|+|++++.+.+........+++|||+++++|.+++....   ..+++..+..++.|++.||.|||++|++|||
T Consensus        58 ~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  134 (284)
T cd05038          58 EILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLGSQRYIHRD  134 (284)
T ss_pred             HHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            3456778999999998876654567899999999999999986532   2489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       135 l~p~nil~~~~~~~~l~dfg~  155 (284)
T cd05038         135 LAARNILVESEDLVKISDFGL  155 (284)
T ss_pred             CCHHhEEEcCCCCEEEccccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.75  E-value=2.1e-19  Score=138.98  Aligned_cols=97  Identities=25%  Similarity=0.262  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||+++++.+.+..  .+..++||||+++++|.+++....  ...+++..+..++.|++.|+.|||++|++|||
T Consensus        45 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d  120 (277)
T cd05577          45 KILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNGGDLKYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRRIVYRD  120 (277)
T ss_pred             HHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCCCcHHHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45677789999999988866  467899999999999999986532  23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       121 i~p~Nil~~~~~~~~l~dfg~  141 (277)
T cd05577         121 LKPENVLLDDHGNVRISDLGL  141 (277)
T ss_pred             CCHHHEEECCCCCEEEccCcc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.75  E-value=2.2e-19  Score=137.03  Aligned_cols=97  Identities=27%  Similarity=0.344  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  .+..++||||+++++|.+++....  ...+++..++.++.|++.||.|||++|++|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~d  126 (256)
T cd08529          51 RVLAKLDSSYIIRYYESFLD--KGKLNIVMEYAENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSKKILHRD  126 (256)
T ss_pred             HHHHhcCCCCeehheeeecc--CCEEEEEEEeCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            34567889999999998876  467899999999999999997632  34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       127 l~~~nili~~~~~~~l~df~~  147 (256)
T cd08529         127 IKSLNLFLDAYDNVKIGDLGV  147 (256)
T ss_pred             CCcceEEEeCCCCEEEccccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.75  E-value=2.2e-19  Score=137.94  Aligned_cols=95  Identities=19%  Similarity=0.333  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  .+..++|+||+.+++|.+++..    ...+++..+..++.|++.||.|||++|++|||
T Consensus        55 ~~l~~l~h~~iv~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~  128 (268)
T cd06630          55 RLMARLNHPHIIRMLGATCE--DSHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQIIHRD  128 (268)
T ss_pred             HHHHHcCCCceehhhceecc--CCeEEEEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45667899999999999875  5678999999999999999864    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccc-eeecccccC
Q psy18117        195 ERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      |||+||+++.++ .+||+|||.
T Consensus       129 i~~~nil~~~~~~~~~l~dfg~  150 (268)
T cd06630         129 VKGANLLIDSTGQRLRIADFGA  150 (268)
T ss_pred             CCHHHEEEcCCCCEEEEccccc
Confidence            999999998776 799999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.2e-19  Score=136.55  Aligned_cols=93  Identities=23%  Similarity=0.277  Sum_probs=83.5

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      .....|+|++++++.+..  ++..++++||+++++|.+++..    ...+++..+..++.|+++||.|+|+++++|||||
T Consensus        51 ~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~  124 (260)
T cd05611          51 MIQGESPYVAKLYYSFQS--KDYLYLVMEYLNGGDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK  124 (260)
T ss_pred             hhcCCCCCeeeeeeeEEc--CCeEEEEEeccCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            345579999999998875  5689999999999999999864    2358999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+++.++.+||+|||.
T Consensus       125 p~nil~~~~~~~~l~dfg~  143 (260)
T cd05611         125 PENLLIDQTGHLKLTDFGL  143 (260)
T ss_pred             HHHeEECCCCcEEEeeccc
Confidence            9999999999999999973

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG4279|consensus

Probab=99.75  E-value=1.3e-19  Score=148.99  Aligned_cols=98  Identities=24%  Similarity=0.306  Sum_probs=86.7

Q ss_pred             CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHL--AECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~--~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      +++.+.+.++|.|||++.+.+..  ++.+.+.||-++||+|.+++..   +.+++  .|..+-.|.+||++||.|||.+.
T Consensus       621 EEIaLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPGGSLSsLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen~  695 (1226)
T KOG4279|consen  621 EEIALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPGGSLSSLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHENK  695 (1226)
T ss_pred             HHHHHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCCCcHHHHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhcc
Confidence            34467789999999999999765  5678899999999999999965   44566  88889999999999999999999


Q ss_pred             ccccccchhhhhhhc-cceeeccccc
Q psy18117        190 ILHRGERETFLSVLG-DCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~-~~~~ki~D~~  214 (215)
                      |||||||-+|+||+. .|++||+|||
T Consensus       696 IVHRDIKGDNVLvNTySGvlKISDFG  721 (1226)
T KOG4279|consen  696 IVHRDIKGDNVLVNTYSGVLKISDFG  721 (1226)
T ss_pred             eeeccccCCcEEEeeccceEEecccc
Confidence            999999999999965 6899999998

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.75  E-value=1.2e-19  Score=147.00  Aligned_cols=99  Identities=18%  Similarity=0.250  Sum_probs=83.3

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------------------------
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------------------------  161 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------------------------  161 (215)
                      .++..+. ||||+++++.+..  ...+++|||||++|+|.+++.....                                
T Consensus        92 ~~l~~l~~H~niv~~~~~~~~--~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (401)
T cd05107          92 KIMSHLGPHLNIVNLLGACTK--GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVS  169 (401)
T ss_pred             HHHHhcCCCCCeEEEEEEEcc--CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchh
Confidence            4445565 9999999998876  4579999999999999999965321                                


Q ss_pred             --------------------------------------------------------------hcCCchhHHHHHHHHHHH
Q psy18117        162 --------------------------------------------------------------KKCHLAECLVWSYFRQIA  179 (215)
Q Consensus       162 --------------------------------------------------------------~~~~~~~~~~~~~~~ql~  179 (215)
                                                                                    ....++...+..++.|++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~  249 (401)
T cd05107         170 LGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVA  249 (401)
T ss_pred             hhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHH
Confidence                                                                          012356677889999999


Q ss_pred             HHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        180 AALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       180 ~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .||.|||+++|+||||||+|||++.++.+||+|||.
T Consensus       250 ~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGl  285 (401)
T cd05107         250 NGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL  285 (401)
T ss_pred             HHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCc
Confidence            999999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.75  E-value=1.8e-19  Score=140.85  Aligned_cols=94  Identities=23%  Similarity=0.363  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  +...++||||+++++|.+++..     ..+++.++..++.|++.||.|||+.|++|||
T Consensus        68 ~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d  140 (297)
T cd06656          68 LVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQVIHRD  140 (297)
T ss_pred             HHHHhCCCCCEeeEEEEEec--CCEEEEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45567889999999998876  5678999999999999999853     2478899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       141 L~p~Nili~~~~~~~l~Dfg~  161 (297)
T cd06656         141 IKSDNILLGMDGSVKLTDFGF  161 (297)
T ss_pred             CCHHHEEECCCCCEEECcCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.75  E-value=2.9e-19  Score=135.96  Aligned_cols=96  Identities=26%  Similarity=0.328  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  ....++||||+++|+|.+++..   ....+++..+..++.|++.||.|+|++|++|||
T Consensus        44 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d  118 (250)
T cd05085          44 RILKQYDHPNIVKLIGVCTQ--RQPIYIVMELVPGGDFLSFLRK---KKDELKTKQLVKFALDAAAGMAYLESKNCIHRD  118 (250)
T ss_pred             HHHHhCCCCCcCeEEEEEec--CCccEEEEECCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            34556789999999998865  4578999999999999998854   233578999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       119 l~p~nili~~~~~~~l~d~g~  139 (250)
T cd05085         119 LAARNCLVGENNVLKISDFGM  139 (250)
T ss_pred             cChheEEEcCCCeEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.75  E-value=3.3e-19  Score=142.07  Aligned_cols=99  Identities=22%  Similarity=0.285  Sum_probs=81.8

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH---------------------------------
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ---------------------------------  161 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~---------------------------------  161 (215)
                      .+..+ +|||++++++.+... +..++++||||++|+|.+++.....                                 
T Consensus        63 ~l~~l~~h~niv~~~~~~~~~-~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (343)
T cd05103          63 ILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSI  141 (343)
T ss_pred             HHHhccCCccHhhhcceeecC-CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccc
Confidence            34455 689999999887653 3567899999999999999864210                                 


Q ss_pred             ------------------------------hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecc
Q psy18117        162 ------------------------------KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVS  211 (215)
Q Consensus       162 ------------------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~  211 (215)
                                                    .+..++...+..++.|+++||.|||++||+||||||+|||++.++.+||+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~  221 (343)
T cd05103         142 TSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKIC  221 (343)
T ss_pred             ccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEE
Confidence                                          01236777888999999999999999999999999999999999999999


Q ss_pred             cccC
Q psy18117        212 EQAK  215 (215)
Q Consensus       212 D~~~  215 (215)
                      |||.
T Consensus       222 dfg~  225 (343)
T cd05103         222 DFGL  225 (343)
T ss_pred             eccc
Confidence            9983

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.75  E-value=1.2e-19  Score=141.24  Aligned_cols=94  Identities=29%  Similarity=0.379  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|+|++++.+++..  ++..++||||+.+ +|.+++...   ...+++..++.++.|+++||.|||+++|+|||
T Consensus        55 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~d  128 (291)
T cd07844          55 SLLKDLKHANIVTLHDIIHT--KKTLTLVFEYLDT-DLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRD  128 (291)
T ss_pred             HHHhhCCCcceeeEEEEEec--CCeEEEEEecCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            56678899999999998875  5688999999986 999987542   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       129 l~p~nil~~~~~~~kl~dfg  148 (291)
T cd07844         129 LKPQNLLISERGELKLADFG  148 (291)
T ss_pred             CCHHHEEEcCCCCEEECccc
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.75  E-value=2e-19  Score=137.98  Aligned_cols=96  Identities=22%  Similarity=0.237  Sum_probs=83.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..   ...+++|||+++|+|.+++....  ...+++..+..++.|+++||.|+|+++++|||
T Consensus        53 ~~l~~l~~~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (262)
T cd05071          53 QVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  127 (262)
T ss_pred             HHHHhCCCCCcceEEEEECC---CCcEEEEEcCCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45567789999999887643   45789999999999999996522  23578899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 l~p~Nill~~~~~~~L~dfg~  148 (262)
T cd05071         128 LRAANILVGENLVCKVADFGL  148 (262)
T ss_pred             cCcccEEEcCCCcEEeccCCc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.75  E-value=3.4e-19  Score=136.35  Aligned_cols=95  Identities=25%  Similarity=0.375  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++.+.+..  +...++++||+++++|.+++...    ..+++..+..++.|+++||.|||++|++|||
T Consensus        45 ~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d  118 (265)
T cd05579          45 DILSQAQSPYVVKLYYSFQG--KKNLYLVMEYLPGGDLASLLENV----GSLDEDVARIYIAEIVLALEYLHSNGIIHRD  118 (265)
T ss_pred             HHHHhCCCcchhHHHHheec--CcEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence            44567789999999988865  56789999999999999998642    2689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+|||.
T Consensus       119 i~~~nil~~~~~~~~l~dfg~  139 (265)
T cd05579         119 LKPDNILIDSNGHLKLTDFGL  139 (265)
T ss_pred             CCHHHeEEcCCCCEEEEeccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.75  E-value=2.7e-19  Score=139.80  Aligned_cols=94  Identities=22%  Similarity=0.379  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  ++..++++||+++++|..++..     ..+++..++.++.|++.||.|||++|++|||
T Consensus        70 ~~l~~l~hp~i~~~~~~~~~--~~~~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d  142 (297)
T cd06659          70 VIMRDYQHQNVVEMYKSYLV--GEELWVLMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQGVIHRD  142 (297)
T ss_pred             HHHHhCCCCchhhhhhheee--CCeEEEEEecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            44567889999999998876  5678999999999999987743     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       143 l~p~Nill~~~~~~kL~dfg~  163 (297)
T cd06659         143 IKSDSILLTLDGRVKLSDFGF  163 (297)
T ss_pred             CCHHHeEEccCCcEEEeechh
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.75  E-value=2.2e-19  Score=141.32  Aligned_cols=97  Identities=25%  Similarity=0.328  Sum_probs=83.3

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      ...+ +||||+++++.+..  .+..+++|||+++|+|.+++.....            ....+++..+..++.|++.||.
T Consensus        71 l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~  148 (314)
T cd05099          71 MKLIGKHKNIINLLGVCTQ--EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGME  148 (314)
T ss_pred             HHhccCCCCeeeEEEEEcc--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHH
Confidence            3444 69999999998865  4578999999999999999966321            1134788899999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++|++||||||+|||++.++.+||+|||.
T Consensus       149 ~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~  180 (314)
T cd05099         149 YLESRRCIHRDLAARNVLVTEDNVMKIADFGL  180 (314)
T ss_pred             HHHHCCeeeccccceeEEEcCCCcEEEccccc
Confidence            99999999999999999999999999999983

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.74  E-value=1.8e-19  Score=137.57  Aligned_cols=97  Identities=24%  Similarity=0.407  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|+|++++.+.+..  ++.++++|||+++|+|.+++...  ....+++..+..++.|++.|+.|||++||+|+|
T Consensus        50 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d  125 (255)
T cd08219          50 VLLAKMKHPNIVAFKESFEA--DGHLYIVMEYCDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRD  125 (255)
T ss_pred             HHHHhCCCCCcceEEEEEEE--CCEEEEEEeeCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            34567789999999998876  56899999999999999988642  233588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.++|+|||.
T Consensus       126 l~p~nili~~~~~~~l~dfg~  146 (255)
T cd08219         126 IKSKNIFLTQNGKVKLGDFGS  146 (255)
T ss_pred             CCcceEEECCCCcEEEcccCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.74  E-value=3.1e-19  Score=137.40  Aligned_cols=89  Identities=19%  Similarity=0.235  Sum_probs=81.4

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +|||++++++.+..  .+..++||||+++|+|.+++...    ..+++..+..++.|+++|+.|||++|++||||||+||
T Consensus        67 ~h~~iv~~~~~~~~--~~~~~iv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ni  140 (267)
T PHA03390         67 DNPNFIKLYYSVTT--LKGHVLIMDYIKDGDLFDLLKKE----GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENV  140 (267)
T ss_pred             cCCCEEEEEEEEec--CCeeEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence            69999999999876  45799999999999999998642    2689999999999999999999999999999999999


Q ss_pred             hhhccc-eeecccccC
Q psy18117        201 SVLGDC-VRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~-~~ki~D~~~  215 (215)
                      +++.++ .++|+|||.
T Consensus       141 l~~~~~~~~~l~dfg~  156 (267)
T PHA03390        141 LYDRAKDRIYLCDYGL  156 (267)
T ss_pred             EEeCCCCeEEEecCcc
Confidence            999998 999999973

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.74  E-value=3.7e-19  Score=135.86  Aligned_cols=98  Identities=32%  Similarity=0.436  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+... +..++++|||+++++|.+++...  ....+++.+++.++.|++.|+.|||++|++|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~-~~~~~lv~e~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~d  127 (257)
T cd08223          51 QLLSQLKHPNIVAYRESWEGE-DGLLYIVMGFCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEKHILHRD  127 (257)
T ss_pred             HHHHhCCCCCeeeeeeeecCC-CCEEEEEecccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            456677899999998876542 34578999999999999998653  234589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       128 i~p~nil~~~~~~~~l~df~~  148 (257)
T cd08223         128 LKTQNVFLTRTNIIKVGDLGI  148 (257)
T ss_pred             CCchhEEEecCCcEEEecccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=3.6e-19  Score=138.17  Aligned_cols=98  Identities=18%  Similarity=0.245  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      ..+..++|+|++++++.+..  ++..++||||+++++|..++... .....+++..+..++.|++.|+.|||+ .+|+||
T Consensus        51 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~  127 (286)
T cd06622          51 DILHKAVSPYIVDFYGAFFI--EGAVYMCMEYMDAGSLDKLYAGG-VATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHR  127 (286)
T ss_pred             HHHHhcCCCcHHhhhhheec--CCeEEEEEeecCCCCHHHHHHhc-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeC
Confidence            44566789999999998876  56899999999999999988542 112368999999999999999999996 599999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||+++.++.+||+|||.
T Consensus       128 dl~p~nil~~~~~~~~l~dfg~  149 (286)
T cd06622         128 DVKPTNVLVNGNGQVKLCDFGV  149 (286)
T ss_pred             CCCHHHEEECCCCCEEEeecCC
Confidence            9999999999999999999983

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0201|consensus

Probab=99.74  E-value=1.9e-19  Score=140.65  Aligned_cols=95  Identities=18%  Similarity=0.306  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++++||.+++..|..  +..++++||||.+|++.++++.    ...+.|..+.-++++++.|+.|+|.++.+|||
T Consensus        63 ~~Ls~~~~~~it~yygsyl~--g~~LwiiMey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrD  136 (467)
T KOG0201|consen   63 SVLSQCDSPNITEYYGSYLK--GTKLWIIMEYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSEKKIHRD  136 (467)
T ss_pred             HHHHhcCcchHHhhhhheee--cccHHHHHHHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhcceeccc
Confidence            56778889999999999987  6799999999999999999965    33468999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||++|||+..+|.+|++|||.
T Consensus       137 IKaanil~s~~g~vkl~DfgV  157 (467)
T KOG0201|consen  137 IKAANILLSESGDVKLADFGV  157 (467)
T ss_pred             ccccceeEeccCcEEEEecce
Confidence            999999999999999999983

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.74  E-value=1.8e-19  Score=138.27  Aligned_cols=95  Identities=18%  Similarity=0.297  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++.+.+..  ....++++||+++++|.+++..    ...+++..+..++.|++.|++|+|+++|+|+|
T Consensus        54 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  127 (265)
T cd06631          54 DLLKSLKHVNIVQYLGTCLD--DNTISIFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRD  127 (265)
T ss_pred             HHHHhcCCCCEeeEeeEeec--CCeEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45677889999999998876  4688999999999999999854    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       128 l~p~nil~~~~~~~~l~dfg~  148 (265)
T cd06631         128 IKGNNVMLMPNGIIKLIDFGC  148 (265)
T ss_pred             cCHHhEEECCCCeEEeccchh
Confidence            999999999999999999973

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.3e-19  Score=137.34  Aligned_cols=96  Identities=21%  Similarity=0.285  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++++++.+..  .+.++++|||+++++|.+++...   +..+++..+..++.|++.|+.|||+++++|||
T Consensus        52 ~~l~~~~h~~i~~~~~~~~~--~~~~~l~~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d  126 (262)
T cd06613          52 SMLKECRHPNIVAYFGSYLR--RDKLWIVMEYCGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHETGKIHRD  126 (262)
T ss_pred             HHHHhCCCCChhceEEEEEe--CCEEEEEEeCCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence            45667899999999988865  56789999999999999988652   24689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       127 l~p~ni~i~~~~~~~l~d~g~  147 (262)
T cd06613         127 IKGANILLTEDGDVKLADFGV  147 (262)
T ss_pred             CChhhEEECCCCCEEECcccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.74  E-value=3e-19  Score=138.30  Aligned_cols=99  Identities=21%  Similarity=0.241  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-----------hcCCchhHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-----------KKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-----------~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      .....+.|+|++++++.+..  ....+++|||+++|+|.+++.....           ....+++..+..++.|++.|+.
T Consensus        59 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~  136 (280)
T cd05092          59 ELLTVLQHQHIVRFYGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMV  136 (280)
T ss_pred             HHHhcCCCCCCceEEEEEec--CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHH
Confidence            44567789999999988765  4578999999999999999865321           0124788999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++|++||||||+|||+++++.+||+|||.
T Consensus       137 ~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~  168 (280)
T cd05092         137 YLASLHFVHRDLATRNCLVGQGLVVKIGDFGM  168 (280)
T ss_pred             HHHHCCeecccccHhhEEEcCCCCEEECCCCc
Confidence            99999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.74  E-value=3.4e-19  Score=139.06  Aligned_cols=95  Identities=29%  Similarity=0.389  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|+|++++++.+..  .+..++||||+ +|+|.+++...   ...+++..+..++.|+++||.|||++||+|||
T Consensus        54 ~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d  127 (298)
T cd07841          54 KLLQELKHPNIIGLLDVFGH--KSNINLVFEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSNWILHRD  127 (298)
T ss_pred             HHHhhcCCCCChhhhheeec--CCEEEEEEccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence            45567789999999999876  56789999999 88999998542   13589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 l~p~nill~~~~~~~l~dfg~  148 (298)
T cd07841         128 LKPNNLLIASDGVLKLADFGL  148 (298)
T ss_pred             CChhhEEEcCCCCEEEcccee
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.74  E-value=1.6e-19  Score=143.40  Aligned_cols=98  Identities=23%  Similarity=0.304  Sum_probs=83.5

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHH
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      ....+ +||||+++++.+..  +..+++++||+++|+|.+++.....            ....++...+..++.|++.||
T Consensus        70 ~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al  147 (334)
T cd05100          70 MMKMIGKHKNIINLLGACTQ--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGM  147 (334)
T ss_pred             HHHhhcCCCCeeeeeEEEcc--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHH
Confidence            34455 79999999998875  4578999999999999999865321            122477788899999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+|||++.++.+||+|||.
T Consensus       148 ~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~  180 (334)
T cd05100         148 EYLASQKCIHRDLAARNVLVTEDNVMKIADFGL  180 (334)
T ss_pred             HHHHHCCeeccccccceEEEcCCCcEEECCccc
Confidence            999999999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4236|consensus

Probab=99.74  E-value=8.9e-20  Score=145.92  Aligned_cols=113  Identities=25%  Similarity=0.345  Sum_probs=92.7

Q ss_pred             HHHHHhhcCCCCCC----CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHH
Q psy18117         98 CKRIEMALFPPLPS----GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS  173 (215)
Q Consensus        98 ~k~i~~~~~~~~~~----~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~  173 (215)
                      .|.|.+..+|...+    .+..+++.++||.||.+.-.|++  .++++.|||-+.| |+.+.|-.  ..++.+++...+-
T Consensus       594 vKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--~ervFVVMEKl~G-DMLEMILS--sEkgRL~er~TkF  668 (888)
T KOG4236|consen  594 VKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--PERVFVVMEKLHG-DMLEMILS--SEKGRLPERITKF  668 (888)
T ss_pred             eeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--CceEEEEehhhcc-hHHHHHHH--hhcccchHHHHHH
Confidence            44455555554322    22378899999999999988887  5689999999987 77776644  4466799999999


Q ss_pred             HHHHHHHHHHHHHhCCccccccchhhhhhhccc---eeecccccC
Q psy18117        174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       174 ~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      +..||+.||+|||.++|+|.||||+|||+.+..   .+||||||+
T Consensus       669 lvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGf  713 (888)
T KOG4236|consen  669 LVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGF  713 (888)
T ss_pred             HHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccc
Confidence            999999999999999999999999999997654   899999984

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.74  E-value=3.9e-19  Score=138.16  Aligned_cols=99  Identities=23%  Similarity=0.290  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------------hcCCchhHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------------KKCHLAECLVWSYFR  176 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------------~~~~~~~~~~~~~~~  176 (215)
                      ...+.+.|||++++++.+..  +...++++||+++|+|.+++.....                  ....+++..++.++.
T Consensus        60 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  137 (288)
T cd05050          60 ALMAEFDHPNIVKLLGVCAV--GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAK  137 (288)
T ss_pred             HHHHhcCCCchheEEEEEcC--CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHH
Confidence            44566789999999998765  4678999999999999999864211                  112477888999999


Q ss_pred             HHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        177 QIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       177 ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |++.||.|+|+++++||||||+||+++.++.+||+|||.
T Consensus       138 ~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  176 (288)
T cd05050         138 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL  176 (288)
T ss_pred             HHHHHHHHHHhCCeecccccHhheEecCCCceEECcccc
Confidence            999999999999999999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.5e-19  Score=140.23  Aligned_cols=97  Identities=22%  Similarity=0.233  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..+.|++++++++.+..  +...+++|||+.+++|.+++...  ....+++..+..++.|+++||.|||++|++|||
T Consensus        53 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  128 (316)
T cd05574          53 EILATLDHPFLPTLYASFQT--ETYLCLVMDYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRD  128 (316)
T ss_pred             HHHHhCCCCCchhheeeeec--CCEEEEEEEecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            44567779999999988865  46789999999999999998642  234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       129 lkp~Nili~~~~~~~l~dfg~  149 (316)
T cd05574         129 LKPENILLHESGHIMLSDFDL  149 (316)
T ss_pred             CChHHeEEcCCCCEEEeecch
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=2.4e-19  Score=137.08  Aligned_cols=94  Identities=22%  Similarity=0.304  Sum_probs=83.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|+|++++++.+..   ...+++|||+++|+|.+++..    ...+++..+..++.|++.|+.|||+++++|||
T Consensus        48 ~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d  120 (257)
T cd05060          48 SVMAQLDHPCIVRLIGVCKG---EPLMLVMELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESKHFVHRD  120 (257)
T ss_pred             HHHHhcCCCCeeeEEEEEcC---CceEEEEEeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccC
Confidence            45567789999999987653   467999999999999999864    23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+||+.
T Consensus       121 i~p~nili~~~~~~kl~df~~  141 (257)
T cd05060         121 LAARNVLLVNRHQAKISDFGM  141 (257)
T ss_pred             cccceEEEcCCCcEEeccccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.74  E-value=4.6e-19  Score=135.86  Aligned_cols=95  Identities=19%  Similarity=0.292  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  +...++++||+++++|.+++..    ...+++..+..++.|+++||.|+|+++++|||
T Consensus        45 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~d  118 (262)
T cd05572          45 EILEECNHPFIVKLYRTFKD--KKYIYMLMEYCLGGELWTILRD----RGLFDEYTARFYIACVVLAFEYLHNRGIIYRD  118 (262)
T ss_pred             HHHHhCCCCCEeeeeeeEEc--CCccEEEEecCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            44567789999999998765  5689999999999999999854    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       119 l~~~nilv~~~~~~~l~df~~  139 (262)
T cd05572         119 LKPENLLLDSNGYVKLVDFGF  139 (262)
T ss_pred             CCHHHEEEcCCCCEEEeeCCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.74  E-value=4.8e-19  Score=137.83  Aligned_cols=95  Identities=23%  Similarity=0.347  Sum_probs=83.1

Q ss_pred             CCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        121 HHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      +|||++++++.+...+   ....++||||+++|+|.+++.........+++..++.++.|++.||+|||+++++||||||
T Consensus        77 ~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp  156 (291)
T cd06639          77 NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKG  156 (291)
T ss_pred             CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence            7999999999876432   2458899999999999999875443445689999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+++.++.+||+|||.
T Consensus       157 ~nili~~~~~~kl~dfg~  174 (291)
T cd06639         157 NNILLTTEGGVKLVDFGV  174 (291)
T ss_pred             HHEEEcCCCCEEEeeccc
Confidence            999999999999999973

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.74  E-value=2.4e-19  Score=138.90  Aligned_cols=96  Identities=25%  Similarity=0.333  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  ++..++|+||+++|+|..++..   .+..+++..+..++.|+++||.|||+.||+|||
T Consensus        54 ~~l~~l~h~~ii~~~~~~~~--~~~~~~v~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~d  128 (282)
T cd06643          54 DILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHENKIIHRD  128 (282)
T ss_pred             HHHHHCCCCCeeeEEEEEee--CCEEEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            34566789999999998876  4678999999999999888753   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       129 lkp~nili~~~~~~kl~dfg~  149 (282)
T cd06643         129 LKAGNILFTLDGDIKLADFGV  149 (282)
T ss_pred             CCcccEEEccCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.74  E-value=2.4e-19  Score=139.60  Aligned_cols=96  Identities=27%  Similarity=0.335  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  +...++||||+++++|..++...   +..+++..+..++.|++.|+.|||++|++|||
T Consensus        61 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~d  135 (292)
T cd06644          61 EILATCNHPYIVKLLGAFYW--DGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSMKIIHRD  135 (292)
T ss_pred             HHHHhCCCCcEeeeEEEEEe--CCeEEEEEecCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecC
Confidence            44567889999999998865  46899999999999998887542   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       136 lkp~Nili~~~~~~kl~dfg~  156 (292)
T cd06644         136 LKAGNVLLTLDGDIKLADFGV  156 (292)
T ss_pred             CCcceEEEcCCCCEEEccCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.74  E-value=3.9e-19  Score=136.16  Aligned_cols=96  Identities=21%  Similarity=0.259  Sum_probs=83.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|+|++.+++.+..   +..+++|||+.+|+|.+++...  ....+++..+..++.|++.||.|||++|++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05069          53 QIMKKLRHDKLVPLYAVVSE---EPIYIVTEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD  127 (260)
T ss_pred             HHHHhCCCCCeeeEEEEEcC---CCcEEEEEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            45667889999999887643   4678999999999999998652  223478899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       128 l~~~Nill~~~~~~~l~dfg~  148 (260)
T cd05069         128 LRAANILVGDNLVCKIADFGL  148 (260)
T ss_pred             cCcceEEEcCCCeEEECCCcc
Confidence            999999999999999999984

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.74  E-value=2.4e-19  Score=137.44  Aligned_cols=97  Identities=30%  Similarity=0.323  Sum_probs=82.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++|+|||++|+|.++|...  ....+++.....++.|+++||.|||+++++|||
T Consensus        53 ~~l~~l~h~ni~~~~g~~~~--~~~~~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~  128 (259)
T PF07714_consen   53 QILRKLRHPNIVKLYGFCIE--NEPLFLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGN  128 (259)
T ss_dssp             HHHHTHSBTTBE-EEEEEES--SSSEEEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred             cccccccccccccccccccc--ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccc
Confidence            34556699999999999884  45689999999999999999763  235699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||++++++.+||+|||.
T Consensus       129 l~~~nill~~~~~~Kl~~f~~  149 (259)
T PF07714_consen  129 LSPSNILLDSNGQVKLSDFGL  149 (259)
T ss_dssp             -SGGGEEEETTTEEEEESTTT
T ss_pred             ccccccccccccccccccccc
Confidence            999999999999999999974

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.74  E-value=5.7e-19  Score=135.98  Aligned_cols=93  Identities=23%  Similarity=0.361  Sum_probs=81.3

Q ss_pred             CCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      +|+|++++.+.+....    ....+++|||+.+|+|.+++...  ....+++..+..++.|++.|+.|||+++|+|||||
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~  138 (272)
T cd06637          61 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK  138 (272)
T ss_pred             CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCC
Confidence            6999999999876432    13578999999999999998652  23468999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+++.++.+||+|||.
T Consensus       139 ~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637         139 GQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             HHHEEECCCCCEEEccCCC
Confidence            9999999999999999984

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0590|consensus

Probab=99.74  E-value=1.3e-18  Score=146.39  Aligned_cols=93  Identities=20%  Similarity=0.297  Sum_probs=80.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...+.|||+++....+...  ....-.||||+. ||..++...    ..+...++..+|.||+.|++|+|+.||.|||
T Consensus       373 ~i~~~l~h~~~~e~l~~~~~~--~~~~~~mE~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrd  445 (601)
T KOG0590|consen  373 CIGSSLSHPNIIETLDIVQEI--DGILQSMEYCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLHSMGLAHRD  445 (601)
T ss_pred             eecccccCCchhhhHHHHhhc--ccchhhhhcccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHHhcCceecc
Confidence            345578999999888877653  344445999999 999998652    3588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      +||+|+++...|.+||+|||
T Consensus       446 lK~enll~~~~g~lki~Dfg  465 (601)
T KOG0590|consen  446 LKLENLLVTENGILKIIDFG  465 (601)
T ss_pred             CccccEEEecCCceEEeecC
Confidence            99999999999999999998

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.74  E-value=6e-19  Score=134.57  Aligned_cols=97  Identities=27%  Similarity=0.347  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|+|++++++.+..  .+..+++|||+++++|.+++.....  ..+++..+..++.|++.|+.|||+++++|||
T Consensus        53 ~~l~~l~~~~i~~~~~~~~~--~~~~~~i~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~d  128 (258)
T smart00219       53 RIMRKLDHPNIVKLLGVCTE--EEPLMIVMEYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESKNFIHRD  128 (258)
T ss_pred             HHHHhcCCCchheEEEEEcC--CCeeEEEEeccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence            34456689999999998876  4689999999999999999865332  1289999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 l~~~nil~~~~~~~~l~dfg~  149 (258)
T smart00219      129 LAARNCLVGENLVVKISDFGL  149 (258)
T ss_pred             cccceEEEccCCeEEEcccCC
Confidence            999999999999999999974

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.74  E-value=3e-19  Score=137.49  Aligned_cols=95  Identities=25%  Similarity=0.371  Sum_probs=83.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|||++++++.+..   ...++||||+++|+|.+++...   ...+++..+..++.|++.||.|+|++|++|||
T Consensus        59 ~~l~~~~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~d  132 (270)
T cd05056          59 YIMRQFDHPHIVKLIGVITE---NPVWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKRFVHRD  132 (270)
T ss_pred             HHHHhCCCCchhceeEEEcC---CCcEEEEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            45667789999999988764   4578999999999999998642   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       133 l~p~nili~~~~~~~l~d~g~  153 (270)
T cd05056         133 IAARNVLVSSPDCVKLGDFGL  153 (270)
T ss_pred             cChheEEEecCCCeEEccCce
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.1e-19  Score=137.01  Aligned_cols=97  Identities=21%  Similarity=0.247  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+.+.....+++++||+++++|.+++..    ...+++..+..++.|++.|+.|||++|++|||
T Consensus        56 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~d  131 (264)
T cd06653          56 QLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSNMIVHRD  131 (264)
T ss_pred             HHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            45667889999999998766444567899999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~ni~i~~~~~~~l~dfg~  152 (264)
T cd06653         132 IKGANILRDSAGNVKLGDFGA  152 (264)
T ss_pred             CCHHHEEEcCCCCEEECcccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.74  E-value=4e-19  Score=136.06  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|++++++++.+..   ...+++|||+++++|.+++...  ....+++..+..++.|++.||.|||+++|+|||
T Consensus        53 ~~l~~l~~~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d  127 (260)
T cd05070          53 QIMKKLRHDKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD  127 (260)
T ss_pred             HHHHhcCCCceEEEEeEECC---CCcEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45677899999999887643   4688999999999999998652  223588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       128 i~p~Nili~~~~~~~l~dfg~  148 (260)
T cd05070         128 LRSANILVGDGLVCKIADFGL  148 (260)
T ss_pred             CccceEEEeCCceEEeCCcee
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.73  E-value=6.2e-19  Score=135.59  Aligned_cols=99  Identities=19%  Similarity=0.243  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh---cCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK---KCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ..++.++||||+++++.+..  ....+++|||+++|+|.+++......   ...+++..+..++.|++.|+.|+|+++++
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~  128 (269)
T cd05044          51 HLMSNFNHPNIVKLLGVCLL--NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI  128 (269)
T ss_pred             HHHHhcCCCCeeeEeeeecC--CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            45567789999999998865  45789999999999999999753321   23478899999999999999999999999


Q ss_pred             ccccchhhhhhhccc-----eeecccccC
Q psy18117        192 HRGERETFLSVLGDC-----VRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~-----~~ki~D~~~  215 (215)
                      ||||||+||+++.++     .+||+|||.
T Consensus       129 H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044         129 HRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCChheEEEecCCCCCCcceEECCccc
Confidence            999999999999887     899999973

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.73  E-value=3.4e-19  Score=137.00  Aligned_cols=97  Identities=22%  Similarity=0.281  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|||++.+.+.+.......+++++||+++++|.+++..    ...+++...+.++.|++.||.|||+++|+|||
T Consensus        56 ~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~  131 (266)
T cd06651          56 QLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSNMIVHRD  131 (266)
T ss_pred             HHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            45667889999999988765434567899999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~nil~~~~~~~~l~dfg~  152 (266)
T cd06651         132 IKGANILRDSAGNVKLGDFGA  152 (266)
T ss_pred             CCHHHEEECCCCCEEEccCCC
Confidence            999999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.73  E-value=4e-19  Score=138.82  Aligned_cols=94  Identities=27%  Similarity=0.419  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +...++|+||+++++|..++..     ..+++.++..++.|++.|+.|||++|++|||
T Consensus        68 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d  140 (296)
T cd06655          68 LVMKELKNPNIVNFLDSFLV--GDELFVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQVIHRD  140 (296)
T ss_pred             HHHHhcCCCceeeeeeeEec--CceEEEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567889999999998875  5689999999999999998853     2489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       141 L~p~Nili~~~~~~kl~dfg~  161 (296)
T cd06655         141 IKSDNVLLGMDGSVKLTDFGF  161 (296)
T ss_pred             CCHHHEEECCCCCEEEccCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.73  E-value=3.6e-19  Score=137.73  Aligned_cols=95  Identities=20%  Similarity=0.294  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++++.+..   ...++++||+++|+|.+++...   +..+++..+..++.|++.|+.|||+++++|||
T Consensus        61 ~~l~~l~h~~i~~~~~~~~~---~~~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d  134 (279)
T cd05057          61 YVMASVDHPHVVRLLGICLS---SQVQLITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRD  134 (279)
T ss_pred             HHHHhCCCCCcceEEEEEec---CceEEEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecc
Confidence            44566789999999998765   5788999999999999998642   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       135 i~p~nil~~~~~~~kL~dfg~  155 (279)
T cd05057         135 LAARNVLVKTPQHVKITDFGL  155 (279)
T ss_pred             cCcceEEEcCCCeEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.73  E-value=3.7e-19  Score=137.93  Aligned_cols=95  Identities=22%  Similarity=0.283  Sum_probs=83.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  +...+++|||++++.|..++..    ...+++..+..++.|++.||.|||++|++|||
T Consensus        52 ~~l~~~~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d  125 (286)
T cd07847          52 RMLKQLKHPNLVNLIEVFRR--KRKLHLVFEYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD  125 (286)
T ss_pred             HHHHhCCCCCEeeeeeEEee--CCEEEEEEeccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            45567889999999998876  4678999999999877776532    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~p~nil~~~~~~~~l~dfg~  146 (286)
T cd07847         126 VKPENILITKQGQIKLCDFGF  146 (286)
T ss_pred             CChhhEEEcCCCcEEECcccc
Confidence            999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=8.6e-19  Score=134.95  Aligned_cols=95  Identities=23%  Similarity=0.415  Sum_probs=83.8

Q ss_pred             CCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      .|+|++++++.+....    +..++++|||+++++|.+++......+..+++..++.++.|+++||.|||+++++||||+
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~  140 (275)
T cd06608          61 NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIK  140 (275)
T ss_pred             CCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence            6999999999886532    235789999999999999987655445679999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+++.++.+||+|||.
T Consensus       141 p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608         141 GQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             HHHEEEccCCeEEECCCcc
Confidence            9999999999999999973

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.73  E-value=2.7e-19  Score=138.54  Aligned_cols=91  Identities=19%  Similarity=0.216  Sum_probs=81.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++++.+..  .+..+++|||+++|+|..+.        .+++..+..++.|++.|+.|||++||+|||
T Consensus        51 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  120 (279)
T cd06619          51 EILYKCDSPYIIGFYGAFFV--ENRISICTEFMDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSLKILHRD  120 (279)
T ss_pred             HHHHhCCCCCeeeEEEEEEE--CCEEEEEEecCCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence            44567889999999998876  45788999999999986542        378899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       121 lkp~Nill~~~~~~~l~dfg~  141 (279)
T cd06619         121 VKPSNMLVNTRGQVKLCDFGV  141 (279)
T ss_pred             CCHHHEEECCCCCEEEeeCCc
Confidence            999999999999999999984

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.73  E-value=8.5e-19  Score=136.38  Aligned_cols=94  Identities=20%  Similarity=0.268  Sum_probs=82.6

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ++..+ +|++|+.+...+..  +...++|+||+++++|.+++..    +..+++..+..++.|+++||.|||++|++|||
T Consensus        57 ~l~~l~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~d  130 (290)
T cd05613          57 VLEHIRQSPFLVTLHYAFQT--DTKLHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLGIIYRD  130 (290)
T ss_pred             HHHhcccCCChhceeeEeec--CCeEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            34445 58999999988865  4578899999999999999864    33588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       131 l~p~nil~~~~~~~kl~dfg~  151 (290)
T cd05613         131 IKLENILLDSNGHVVLTDFGL  151 (290)
T ss_pred             CCHHHeEECCCCCEEEeeCcc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.73  E-value=4.6e-19  Score=138.07  Aligned_cols=97  Identities=19%  Similarity=0.303  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++.+.+.+...+....++|+||+.+ +|.+++....   ..+++..+..++.|++.||.|||++|++|||
T Consensus        56 ~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~d  131 (293)
T cd07843          56 NILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLHDNWILHRD  131 (293)
T ss_pred             HHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            45567789999999998876434789999999986 9999886522   2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       132 l~p~nili~~~~~~~l~d~g~  152 (293)
T cd07843         132 LKTSNLLLNNRGILKICDFGL  152 (293)
T ss_pred             CCHHHEEECCCCcEEEeecCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.73  E-value=7.5e-19  Score=135.16  Aligned_cols=96  Identities=28%  Similarity=0.493  Sum_probs=86.1

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGER  196 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDik  196 (215)
                      +.++|||++++++.+..  ++..+++|||+++++|.+++.........+++..++.++.|++.|+.|||+ ++++|||||
T Consensus        64 ~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~  141 (269)
T cd08528          64 EQLRHPNIVRYYKTFLE--NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT  141 (269)
T ss_pred             hcCCCCCeeeEEeeEcc--CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence            45789999999998876  568899999999999999987655555679999999999999999999996 789999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+++.++.+||+|||.
T Consensus       142 ~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528         142 PNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             HHHEEECCCCcEEEecccc
Confidence            9999999999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=5e-19  Score=135.50  Aligned_cols=97  Identities=21%  Similarity=0.252  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  ....+++|||+++++|.+++....  ...+++..+..++.|++.|+.|||++|++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~d  128 (261)
T cd05034          53 QIMKKLRHDKLVQLYAVCSE--EEPIYIVTEYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRD  128 (261)
T ss_pred             HHHhhCCCCCEeeeeeeeec--CCceEEEEeccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45567889999999988765  467899999999999999986532  23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 i~p~nili~~~~~~~l~d~g~  149 (261)
T cd05034         129 LAARNILVGENLVCKIADFGL  149 (261)
T ss_pred             cchheEEEcCCCCEEECcccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.73  E-value=4.4e-19  Score=139.28  Aligned_cols=97  Identities=28%  Similarity=0.396  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|+|++++.+.+.....+.+++||||+.+ +|.+++...   +..+++..+..++.|++.||.|||++|++|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  133 (309)
T cd07845          58 TLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENFIIHRD  133 (309)
T ss_pred             HHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            56678899999999998865434568999999986 898888642   24589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       134 l~p~nil~~~~~~~kL~dfg~  154 (309)
T cd07845         134 LKVSNLLLTDKGCLKIADFGL  154 (309)
T ss_pred             CCHHHEEECCCCCEEECccce
Confidence            999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.73  E-value=4.5e-19  Score=137.09  Aligned_cols=94  Identities=18%  Similarity=0.296  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++.+.+..  +...++|+||+++++|.+++..     ..+++..+..++.|+++|+.|||++|++|+|
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~d  126 (277)
T cd06642          54 TVLSQCDSPYITRYYGSYLK--GTKLWIIMEYLGGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSERKIHRD  126 (277)
T ss_pred             HHHHcCCCCccHhhhccccc--CCceEEEEEccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCeeccC
Confidence            44567789999999999876  5678999999999999998743     3588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       127 l~p~ni~i~~~~~~~l~dfg~  147 (277)
T cd06642         127 IKAANVLLSEQGDVKLADFGV  147 (277)
T ss_pred             CChheEEEeCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=1.1e-18  Score=134.54  Aligned_cols=95  Identities=27%  Similarity=0.327  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  .+..++||||+++|+|.+++...    ..+++..+..++.|++.||.|+|+++++|||
T Consensus        60 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d  133 (272)
T cd06629          60 ETLKDLDHLNIVQYLGFETT--EEYLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSKGILHRD  133 (272)
T ss_pred             HHHHhcCCCCcceEEEEecc--CCceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCCeeecC
Confidence            45667789999999998765  56889999999999999998653    3689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       134 l~~~nil~~~~~~~~l~d~~~  154 (272)
T cd06629         134 LKADNLLVDADGICKISDFGI  154 (272)
T ss_pred             CChhhEEEcCCCeEEEeeccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.72  E-value=8e-19  Score=136.08  Aligned_cols=95  Identities=27%  Similarity=0.432  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +...++|+||+ +++|.+++....   ..+++..++.++.|+++||.|||++|++|||
T Consensus        51 ~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  124 (286)
T cd07832          51 KALQACQHPYVVKLLDVFPH--GSGFVLVMEYM-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHANGIMHRD  124 (286)
T ss_pred             HHHHhCCCCCCcceeeEEec--CCeeEEEeccc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            44566779999999998876  56889999999 889999986422   4589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       125 l~p~ni~~~~~~~~~l~dfg~  145 (286)
T cd07832         125 LKPANLLISADGVLKIADFGL  145 (286)
T ss_pred             cCHHHEEEcCCCcEEEeeeee
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.72  E-value=1.6e-18  Score=132.10  Aligned_cols=99  Identities=27%  Similarity=0.494  Sum_probs=88.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ....++|+||+++++|.+++......+..+++..++.++.|+++|+.|||++|++|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~  128 (256)
T cd08530          51 RILASVNHPNIISYKEAFLD--GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRD  128 (256)
T ss_pred             HHHHhCCCCCchhhhhhhcc--CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            45567789999999999876  4678999999999999999877555556789999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       129 l~~~ni~~~~~~~~kl~d~g~  149 (256)
T cd08530         129 LKSANILLVANDLVKIGDLGI  149 (256)
T ss_pred             CCcceEEEecCCcEEEeeccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0986|consensus

Probab=99.72  E-value=1.3e-19  Score=142.44  Aligned_cols=97  Identities=26%  Similarity=0.276  Sum_probs=88.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..+..++||.+.-+|.+  .+.+++||..+.||||.-.|...+.  ..++|..+.-|+.+|+.||++||+.+||.||
T Consensus       237 ~iL~kV~s~FiVslaYAfeT--kd~LClVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~~iVYRD  312 (591)
T KOG0986|consen  237 QILEKVSSPFIVSLAYAFET--KDALCLVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRRRIVYRD  312 (591)
T ss_pred             HHHHHhccCcEEEEeeeecC--CCceEEEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhcceeecc
Confidence            56778888999999988887  5689999999999999988866442  4699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|||+|+.|+++|+|.|+
T Consensus       313 LKPeNILLDd~GhvRISDLGL  333 (591)
T KOG0986|consen  313 LKPENILLDDHGHVRISDLGL  333 (591)
T ss_pred             CChhheeeccCCCeEeeccce
Confidence            999999999999999999884

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.72  E-value=7.2e-19  Score=135.98  Aligned_cols=99  Identities=21%  Similarity=0.250  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH---hcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ---KKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ...+.++|+|++++++.+..  .+..+++|||+++|+|.+++.....   ....+++..+..++.|++.|+.|||+++++
T Consensus        61 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv  138 (277)
T cd05036          61 LIMSKFNHQNIVRLIGVSFE--RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFI  138 (277)
T ss_pred             HHHHhCCCCCEeeEEEEEcc--CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            34567889999999998765  4567899999999999999865321   112588899999999999999999999999


Q ss_pred             ccccchhhhhhhccc---eeecccccC
Q psy18117        192 HRGERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      ||||||+||+++.++   .+||+|||.
T Consensus       139 H~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036         139 HRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             ecccchheEEEeccCCCcceEeccCcc
Confidence            999999999998765   699999974

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.72  E-value=8e-19  Score=133.98  Aligned_cols=95  Identities=27%  Similarity=0.391  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++++.+..  +...++++||+++++|.+++..    ...+++..+..++.|++.|+.|||++||+|||
T Consensus        54 ~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  127 (258)
T cd06632          54 ALLSKLQHPNIVQYLGTERE--EDNLYIFLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRD  127 (258)
T ss_pred             HHHHhcCCCCchheeeeEec--CCeEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567789999999998765  5678999999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       128 l~~~ni~~~~~~~~kl~d~~~  148 (258)
T cd06632         128 IKGANILVDTNGVVKLADFGM  148 (258)
T ss_pred             CCHHHEEECCCCCEEEccCcc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.72  E-value=1e-18  Score=135.42  Aligned_cols=96  Identities=27%  Similarity=0.383  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  ++..+++|||+. ++|..++...  .+..+++..+..++.|+++||+|||+++++|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~-~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~  125 (284)
T cd07860          51 SLLKELNHPNIVKLLDVIHT--ENKLYLVFEFLH-QDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  125 (284)
T ss_pred             HHHHhcCCCCCcchhhhccc--CCcEEEEeeccc-cCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45677889999999999875  568899999997 4899888652  234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~p~nill~~~~~~~l~dfg~  146 (284)
T cd07860         126 LKPQNLLINTEGAIKLADFGL  146 (284)
T ss_pred             CCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.72  E-value=5e-19  Score=134.74  Aligned_cols=96  Identities=25%  Similarity=0.292  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.+.|+|++++.+.+..  ....+++|||+++++|.+++...   ...+++..+..++.|++.|+.|+|+++++|||
T Consensus        44 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d  118 (251)
T cd05041          44 EILKQYDHPNIVKLIGVCVQ--KQPIYIVMELVPGGSLLTFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD  118 (251)
T ss_pred             HHHHhCCCCCeEEEEEEEec--CCCeEEEEEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence            44567789999999988765  46789999999999999998542   23578899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       119 i~p~nili~~~~~~~l~d~g~  139 (251)
T cd05041         119 LAARNCLVGENNVLKISDFGM  139 (251)
T ss_pred             cCcceEEEcCCCcEEEeeccc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.72  E-value=1.1e-18  Score=133.73  Aligned_cols=96  Identities=18%  Similarity=0.300  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+.   .+..+++|||+.+|+|.+++..  .....+++.++..++.|++.||+|||++|++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~---~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~d  127 (260)
T cd05067          53 NLMKQLQHPRLVRLYAVVT---QEPIYIITEYMENGSLVDFLKT--PEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRD  127 (260)
T ss_pred             HHHHhcCCcCeeeEEEEEc---cCCcEEEEEcCCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence            4566788999999988764   3468999999999999999854  2234688999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.++|+|||.
T Consensus       128 l~p~ni~i~~~~~~~l~dfg~  148 (260)
T cd05067         128 LRAANILVSETLCCKIADFGL  148 (260)
T ss_pred             ccHHhEEEcCCCCEEEccCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.72  E-value=2.2e-18  Score=131.90  Aligned_cols=97  Identities=24%  Similarity=0.399  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  ....++++||+++++|.+++.........+++..++.++.|+++|+.|||++|++|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~  131 (260)
T cd08222          54 QLLSKLDHPAIVKFHASFLE--RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRD  131 (260)
T ss_pred             HHHHhCCCCcHHHHHHHHhc--CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccC
Confidence            34567789999999999876  4578899999999999999876555556799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++. +.+||+|||
T Consensus       132 l~~~nili~~-~~~~l~d~g  150 (260)
T cd08222         132 LKAKNIFLKN-NLLKIGDFG  150 (260)
T ss_pred             CChhheEeec-CCEeecccC
Confidence            9999999975 679999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.72  E-value=8.8e-19  Score=134.76  Aligned_cols=96  Identities=23%  Similarity=0.274  Sum_probs=82.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHL--AECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~--~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .....++|+|++++++.+..  ++..++++||+++++|.+++....   ..+  ++..+..++.|++.|+.|||++||+|
T Consensus        57 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h  131 (268)
T cd06624          57 ALHSYLKHRNIVQYLGSDSE--NGFFKIFMEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEGLKYLHDNQIVH  131 (268)
T ss_pred             HHHHhcCCCCeeeeeeeecc--CCEEEEEEecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHHHHHHHHCCEee
Confidence            44567789999999998765  467899999999999999986522   234  78889999999999999999999999


Q ss_pred             cccchhhhhhhc-cceeecccccC
Q psy18117        193 RGERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      |||||+||+++. ++.+||+|||.
T Consensus       132 ~dl~p~nil~~~~~~~~~l~dfg~  155 (268)
T cd06624         132 RDIKGDNVLVNTYSGVVKISDFGT  155 (268)
T ss_pred             cCCCHHHEEEcCCCCeEEEecchh
Confidence            999999999976 67999999973

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.71  E-value=1.9e-18  Score=133.87  Aligned_cols=93  Identities=20%  Similarity=0.352  Sum_probs=80.9

Q ss_pred             CCcchhhhhhhhcCC----chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        121 HHPNIVELRSAFASR----SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      +|+|++++++.+...    .....+++|||+.+|+|.+++....  ...+++..+..++.|++.|+.|||++||+|||||
T Consensus        71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~  148 (282)
T cd06636          71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHKVIHRDIK  148 (282)
T ss_pred             CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence            699999999887532    1346789999999999999986532  3458889999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||+++.++.+||+|||.
T Consensus       149 ~~nili~~~~~~~l~dfg~  167 (282)
T cd06636         149 GQNVLLTENAEVKLVDFGV  167 (282)
T ss_pred             HHHEEECCCCCEEEeeCcc
Confidence            9999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.71  E-value=1.6e-18  Score=137.55  Aligned_cols=96  Identities=23%  Similarity=0.423  Sum_probs=82.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCc--hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .++..++|||++++.+.+....  ...+++||||+.+ +|.+++..    +..+++..++.++.|++.||.|||++||+|
T Consensus        56 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  130 (334)
T cd07855          56 KILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSANVIH  130 (334)
T ss_pred             HHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhh-hHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            5567788999999999876432  3467899999975 89888753    335899999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+||+++.++.+||+|||.
T Consensus       131 ~dlkp~Nil~~~~~~~kl~dfg~  153 (334)
T cd07855         131 RDLKPSNLLVNEDCELRIGDFGM  153 (334)
T ss_pred             CCCCHHHEEEcCCCcEEeccccc
Confidence            99999999999999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.71  E-value=1.7e-18  Score=134.04  Aligned_cols=100  Identities=20%  Similarity=0.302  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh----cCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----KCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      ...+.+.|+|++++++.+... +...++++||+.+|+|.+++......    ...+++..+..++.|++.||+|||++++
T Consensus        60 ~~l~~l~h~ni~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i  138 (280)
T cd05043          60 CLLYGLSHQNILPILHVCIED-GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV  138 (280)
T ss_pred             HHHHhCCCCCCCeEEEEEecC-CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            345677999999999876542 45788999999999999998764321    1458999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||++++++.+||+|||.
T Consensus       139 ~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043         139 IHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             eecccCHhhEEEcCCCcEEECCCCC
Confidence            9999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0983|consensus

Probab=99.71  E-value=4.4e-18  Score=126.28  Aligned_cols=91  Identities=16%  Similarity=0.228  Sum_probs=78.5

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccch
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERE  197 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp  197 (215)
                      .-..|.||+.+++|..  +..+++.||.+.. .+..++..   .+.+++|..+-++..-+++||.||-. +||+|||+||
T Consensus       147 s~dcpyIV~c~GyFi~--n~dV~IcMelMs~-C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP  220 (391)
T KOG0983|consen  147 SHDCPYIVQCFGYFIT--NTDVFICMELMST-CAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP  220 (391)
T ss_pred             ccCCCeeeeeeeEEee--CchHHHHHHHHHH-HHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence            3447999999999987  5689999999886 66666643   23469999999999999999999985 6999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||+|+.|++|+||||.
T Consensus       221 SNILlDe~GniKlCDFGI  238 (391)
T KOG0983|consen  221 SNILLDERGNIKLCDFGI  238 (391)
T ss_pred             cceEEccCCCEEeecccc
Confidence            999999999999999984

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.71  E-value=1.5e-18  Score=135.42  Aligned_cols=93  Identities=25%  Similarity=0.398  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++.+++.+..  ++..++|+||+++++|.+++..     ..+++..+..++.|++.|+.|||++|++|||
T Consensus        68 ~~l~~l~hp~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~gi~H~d  140 (293)
T cd06647          68 LVMRENKHPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  140 (293)
T ss_pred             HHHhhcCCCCeeehhheeee--CCcEEEEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence            34567889999999998876  4678999999999999999853     2478899999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       141 L~p~Nili~~~~~~kL~dfg  160 (293)
T cd06647         141 IKSDNILLGMDGSVKLTDFG  160 (293)
T ss_pred             CCHHHEEEcCCCCEEEccCc
Confidence            99999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0667|consensus

Probab=99.71  E-value=2.6e-18  Score=140.18  Aligned_cols=87  Identities=23%  Similarity=0.232  Sum_probs=78.6

Q ss_pred             cchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhh
Q psy18117        123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSV  202 (215)
Q Consensus       123 ~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~  202 (215)
                      -|+|++++.|.-  .+++++|+|..+. +|.++|+.+.  -..++...++.++.||+.||.+||+.||||.||||||||+
T Consensus       248 ~n~Vrm~d~F~f--r~HlciVfELL~~-NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL  322 (586)
T KOG0667|consen  248 YNIVRMLDYFYF--RNHLCIVFELLST-NLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILL  322 (586)
T ss_pred             eeEEEeeecccc--ccceeeeehhhhh-hHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheee
Confidence            489999999976  5789999999998 9999998744  3459999999999999999999999999999999999999


Q ss_pred             hccc--eeeccccc
Q psy18117        203 LGDC--VRTVSEQA  214 (215)
Q Consensus       203 ~~~~--~~ki~D~~  214 (215)
                      ...+  .+||+|||
T Consensus       323 ~~~~r~~vKVIDFG  336 (586)
T KOG0667|consen  323 KDPKRSRIKVIDFG  336 (586)
T ss_pred             ccCCcCceeEEecc
Confidence            7654  89999998

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.71  E-value=2.7e-18  Score=130.99  Aligned_cols=97  Identities=31%  Similarity=0.388  Sum_probs=83.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++++.+..  ++..++||||+++++|.+++....  ...+++..+..++.|++.|+.|+|++|++|||
T Consensus        51 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~d  126 (256)
T cd08220          51 QVLKLLSHPNIIEYYENFLE--DKALMIVMEYAPGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTKLILHRD  126 (256)
T ss_pred             HHHhhCCCCchhheeeeEec--CCEEEEEEecCCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45567789999999988765  467899999999999999996532  33589999999999999999999999999999


Q ss_pred             cchhhhhhhcc-ceeecccccC
Q psy18117        195 ERETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~-~~~ki~D~~~  215 (215)
                      |||+||+++.+ +.+||+|||.
T Consensus       127 l~~~nil~~~~~~~~~l~d~~~  148 (256)
T cd08220         127 LKTQNILLDKHKMVVKIGDFGI  148 (256)
T ss_pred             CCHHHEEEcCCCCEEEEccCCC
Confidence            99999999865 4789999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.71  E-value=1.2e-18  Score=133.55  Aligned_cols=95  Identities=19%  Similarity=0.319  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|+|++++.+.+..   ...+++|||+++|+|.+++...  ....+++..+..++.|++.||.|+|++|++|||
T Consensus        53 ~~l~~l~~~~i~~~~~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d  127 (260)
T cd05073          53 NVMKTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD  127 (260)
T ss_pred             HHHHhcCCCCcceEEEEEcC---CCeEEEEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            45677889999999888764   4678999999999999998652  233578888999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+||+
T Consensus       128 l~p~ni~i~~~~~~~l~d~~  147 (260)
T cd05073         128 LRAANILVSASLVCKIADFG  147 (260)
T ss_pred             cCcceEEEcCCCcEEECCCc
Confidence            99999999999999999997

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.71  E-value=1.6e-18  Score=134.42  Aligned_cols=95  Identities=27%  Similarity=0.338  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||++++++.+..  ++..++|+||++++.|..++..    ...+++..++.++.|+++|+.|||++|++|||
T Consensus        52 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~  125 (286)
T cd07846          52 RMLKQLRHENLVNLIEVFRR--KKRLYLVFEFVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHNIIHRD  125 (286)
T ss_pred             HHHHhcCCcchhhHHHhccc--CCeEEEEEecCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            45667889999999999875  5689999999999888876533    23489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       126 l~p~ni~~~~~~~~~l~dfg~  146 (286)
T cd07846         126 IKPENILVSQSGVVKLCDFGF  146 (286)
T ss_pred             CCHHHEEECCCCcEEEEeeee
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.71  E-value=1.2e-18  Score=133.06  Aligned_cols=96  Identities=19%  Similarity=0.261  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.||+++++++.+..  ....+++|||+++|+|.+++...   +..+++..++.++.|++.|+.|||+++++|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~d  125 (256)
T cd05112          51 QVMMKLSHPKLVQLYGVCTE--RSPICLVFEFMEHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSNVIHRD  125 (256)
T ss_pred             HHHHhCCCCCeeeEEEEEcc--CCceEEEEEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45566789999999988765  45789999999999999988542   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~p~ni~i~~~~~~~l~d~g~  146 (256)
T cd05112         126 LAARNCLVGENQVVKVSDFGM  146 (256)
T ss_pred             cccceEEEcCCCeEEECCCcc
Confidence            999999999999999999973

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.71  E-value=1.7e-18  Score=132.24  Aligned_cols=97  Identities=27%  Similarity=0.432  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+..  .+..++|+||+.+++|.+++...  ....+++..+..++.|++.|+.|+|++|++|+|
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~  126 (256)
T cd08218          51 AVLSNMKHPNIVQYQESFEE--NGNLYIVMDYCEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDRKILHRD  126 (256)
T ss_pred             HHHHhCCCCCeeeeEeeecC--CCeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence            45667889999999998876  46889999999999999988652  223578999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       127 l~~~nil~~~~~~~~l~d~~~  147 (256)
T cd08218         127 IKSQNIFLTKDGTIKLGDFGI  147 (256)
T ss_pred             CCHHHEEEcCCCCEEEeeccc
Confidence            999999999999999999974

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.71  E-value=2.1e-18  Score=137.92  Aligned_cols=94  Identities=27%  Similarity=0.389  Sum_probs=80.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++|||++++++.+....    ....++||||+.+ +|.+.+..      .+++..+..++.|++.||.|||++||
T Consensus        67 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~gi  139 (353)
T cd07850          67 VLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAGI  139 (353)
T ss_pred             HHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4566788999999998875422    1346899999976 88887743      28899999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||+++.++.+||+|||.
T Consensus       140 ~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850         140 IHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             eeCCCCHHHEEECCCCCEEEccCcc
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.71  E-value=1.6e-18  Score=134.89  Aligned_cols=95  Identities=25%  Similarity=0.258  Sum_probs=81.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|+|++++.+.+..  +...++|+||+. ++|.+++...   ...+++..+..++.|+++||.|||++||+|||
T Consensus        55 ~~l~~l~h~ni~~~~~~~~~--~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d  128 (291)
T cd07870          55 SLLKGLKHANIVLLHDIIHT--KETLTFVFEYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD  128 (291)
T ss_pred             HHHHhcCCCCEeEEEEEEec--CCeEEEEEeccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45667889999999998865  457889999997 5888776431   23578888999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       129 lkp~Nil~~~~~~~~l~Dfg~  149 (291)
T cd07870         129 LKPQNLLISYLGELKLADFGL  149 (291)
T ss_pred             CChHHEEEcCCCcEEEecccc
Confidence            999999999999999999983

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.71  E-value=2.1e-18  Score=132.20  Aligned_cols=95  Identities=21%  Similarity=0.322  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  .+..++++||+++++|.+++..    ...+++..++.++.|++.|+.|||++||+|||
T Consensus        51 ~~~~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d  124 (264)
T cd06626          51 KVLELLKHPNLVKYYGVEVH--REKVYIFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD  124 (264)
T ss_pred             HHHHhCCCCChhheeeeEec--CCEEEEEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45667789999999988755  4678999999999999999854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       125 l~~~nil~~~~~~~kl~d~g~  145 (264)
T cd06626         125 IKPANIFLDHNGVIKLGDFGC  145 (264)
T ss_pred             CCHHHEEECCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.71  E-value=1.1e-18  Score=135.19  Aligned_cols=96  Identities=25%  Similarity=0.321  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  .+..++||||+++ +|.+++.... .+..+++..+..++.|+++||.|+|++|++|||
T Consensus        50 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~d  125 (284)
T cd07836          50 SLMKELKHENIVRLHDVIHT--ENKLMLVFEYMDK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRD  125 (284)
T ss_pred             HHHHhhcCCCEeeeeeeEee--CCcEEEEEecCCc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            45667789999999999876  4678999999996 9998886532 234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||++++++.+||+|||
T Consensus       126 l~p~ni~~~~~~~~~l~d~g  145 (284)
T cd07836         126 LKPQNLLINKRGELKLADFG  145 (284)
T ss_pred             CCHHHEEECCCCcEEEeecc
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.71  E-value=2.2e-18  Score=131.29  Aligned_cols=99  Identities=29%  Similarity=0.466  Sum_probs=87.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  +...++++||+++++|.+++.....+...+++..+..++.|+++|+.|||++|++|+|
T Consensus        51 ~~l~~l~~~~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~d  128 (258)
T cd08215          51 KILKKLNHPNIIKYYESFEE--KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRD  128 (258)
T ss_pred             HHHHhcCCCChhheEEEEec--CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            34567779999999998876  4678999999999999999977543346799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+|||.
T Consensus       129 l~~~nil~~~~~~~~l~d~~~  149 (258)
T cd08215         129 IKPQNIFLTSNGLVKLGDFGI  149 (258)
T ss_pred             CChHHeEEcCCCcEEECCccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.71  E-value=1.4e-18  Score=135.04  Aligned_cols=93  Identities=24%  Similarity=0.433  Sum_probs=83.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|||++++++.+..  ++..++++||+++++|.+++..     ..+++..+..++.|++.|+.|+|++||+|||
T Consensus        68 ~~l~~~~h~~vv~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d  140 (285)
T cd06648          68 VIMRDYQHPNIVEMYSSYLV--GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQGVIHRD  140 (285)
T ss_pred             HHHHHcCCCChheEEEEEEc--CCeEEEEEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            44567789999999998865  5678999999999999998854     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       141 l~p~Nil~~~~~~~~l~d~g  160 (285)
T cd06648         141 IKSDSILLTSDGRVKLSDFG  160 (285)
T ss_pred             CChhhEEEcCCCcEEEcccc
Confidence            99999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1345|consensus

Probab=99.71  E-value=1.2e-18  Score=129.17  Aligned_cols=91  Identities=19%  Similarity=0.319  Sum_probs=76.5

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      .-.|.+|+.-+++-... .+...+++|||+.|||..-+...     .+.|...+.++.|+++|++|+|++++||||||.+
T Consensus        77 Ls~H~hIi~tY~vaFqt-~d~YvF~qE~aP~gdL~snv~~~-----GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~e  150 (378)
T KOG1345|consen   77 LSPHQHIIDTYEVAFQT-SDAYVFVQEFAPRGDLRSNVEAA-----GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAE  150 (378)
T ss_pred             eccchhhhHHHHHHhhc-CceEEEeeccCccchhhhhcCcc-----cccHHHHHHHHHHHHHHHHHhhccchhhcccccc
Confidence            44588999988774432 34666899999999999988552     3899999999999999999999999999999999


Q ss_pred             hhhhhc-c-ceeecccccC
Q psy18117        199 FLSVLG-D-CVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~-~-~~~ki~D~~~  215 (215)
                      ||||-. + .++|+||||.
T Consensus       151 NiLif~~df~rvKlcDFG~  169 (378)
T KOG1345|consen  151 NILIFDADFYRVKLCDFGL  169 (378)
T ss_pred             eEEEecCCccEEEeeeccc
Confidence            999843 3 4999999984

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.71  E-value=1.9e-18  Score=131.82  Aligned_cols=96  Identities=18%  Similarity=0.271  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ....++++||+++++|.+++...   +..+++..+..++.|++.|+.|||+++++|||
T Consensus        50 ~~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d  124 (256)
T cd06612          50 SILKQCDSPYIVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD  124 (256)
T ss_pred             HHHHhCCCCcEeeeeeeeec--CCcEEEEEecCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            34456699999999998876  46889999999999999998542   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+|||.
T Consensus       125 l~~~ni~~~~~~~~~l~dfg~  145 (256)
T cd06612         125 IKAGNILLNEEGQAKLADFGV  145 (256)
T ss_pred             CCcceEEECCCCcEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0696|consensus

Probab=99.70  E-value=2.2e-18  Score=134.49  Aligned_cols=89  Identities=24%  Similarity=0.363  Sum_probs=82.5

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +-|.++.+...|.+  -+++|.||||+.||||.-.|+..+    .+.|+.+.-|+..|+-||-+||++|||.||||.+||
T Consensus       408 kppFL~qlHScFQT--mDRLyFVMEyvnGGDLMyhiQQ~G----kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNv  481 (683)
T KOG0696|consen  408 KPPFLVQLHSCFQT--MDRLYFVMEYVNGGDLMYHIQQVG----KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNV  481 (683)
T ss_pred             CCchHHHHHHHhhh--hhheeeEEEEecCchhhhHHHHhc----ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccce
Confidence            46789999999987  469999999999999999997644    599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |+|.+|++||+|||+
T Consensus       482 mLd~eGHiKi~DFGm  496 (683)
T KOG0696|consen  482 MLDSEGHIKIADFGM  496 (683)
T ss_pred             EeccCCceEeeeccc
Confidence            999999999999985

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.70  E-value=4.4e-18  Score=131.41  Aligned_cols=93  Identities=29%  Similarity=0.424  Sum_probs=83.5

Q ss_pred             CccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ...+. |+|++++++.+..  ++..+++||++++++|.+++..    ...+++..++.++.|++.||.|||++|++|+||
T Consensus        55 ~~~l~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl  128 (280)
T cd05581          55 LTRLNGHPGIIKLYYTFQD--EENLYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDL  128 (280)
T ss_pred             HHhcccCCCchhHHHHhcC--CceEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence            34555 9999999999876  5688999999999999999865    236999999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||+++.++.++|+|||.
T Consensus       129 ~~~ni~i~~~~~~~l~df~~  148 (280)
T cd05581         129 KPENILLDKDMHIKITDFGT  148 (280)
T ss_pred             CHHHeEECCCCCEEecCCcc
Confidence            99999999999999999983

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PRK10345 hypothetical protein; Provisional

Probab=99.70  E-value=2e-18  Score=127.51  Aligned_cols=87  Identities=14%  Similarity=0.243  Sum_probs=68.6

Q ss_pred             CCCcchhhhhhhhcCCch-hHHH-HHHhh--hcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHH-HHHHhCCccccc
Q psy18117        120 LHHPNIVELRSAFASRSG-QELF-LVLEL--ADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL-QYVHSRRILHRG  194 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~-~~~~-lv~e~--~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l-~~lH~~~i~HrD  194 (215)
                      ..||||+++++++.+..+ +.++ +|+||  +.+|+|.++++.     ..+++.  ..++.|++.++ +|||+++|+|||
T Consensus        58 ~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrD  130 (210)
T PRK10345         58 IDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDNRIVTME  130 (210)
T ss_pred             CCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHCCEeecC
Confidence            368999999999987432 2333 78999  558999999954     125555  36688888888 899999999999


Q ss_pred             cchhhhhhhcc----ceeecccc
Q psy18117        195 ERETFLSVLGD----CVRTVSEQ  213 (215)
Q Consensus       195 ikp~Nil~~~~----~~~ki~D~  213 (215)
                      |||+|||++..    +.++|+|+
T Consensus       131 lKp~NILl~~~~~~~~~~~LiDg  153 (210)
T PRK10345        131 LKPQNILCQRISESEVIPVVCDN  153 (210)
T ss_pred             CCHHHEEEeccCCCCCcEEEEEC
Confidence            99999999743    38999994

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.70  E-value=4.1e-18  Score=132.79  Aligned_cols=99  Identities=19%  Similarity=0.198  Sum_probs=81.0

Q ss_pred             CCccC-CCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQK-KCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      +...+ +|+|++++++.+...+.   ...+++|||+++ +|.+++...... ...+++..++.++.|+++||.|||++||
T Consensus        53 ~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  131 (295)
T cd07837          53 LLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV  131 (295)
T ss_pred             HHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34455 46999999988765321   126899999996 899988653322 3458999999999999999999999999


Q ss_pred             cccccchhhhhhhc-cceeecccccC
Q psy18117        191 LHRGERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      +||||||+||+++. ++.+||+|||.
T Consensus       132 ~H~dl~~~nil~~~~~~~~kl~dfg~  157 (295)
T cd07837         132 MHRDLKPQNLLVDKQKGLLKIADLGL  157 (295)
T ss_pred             eecCCChHHEEEecCCCeEEEeeccc
Confidence            99999999999998 88999999973

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.70  E-value=1.7e-18  Score=135.08  Aligned_cols=94  Identities=20%  Similarity=0.351  Sum_probs=83.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ++..+++|||+++++|.+++..     ..+++..+..++.|++.|++|||++|++|||
T Consensus        69 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~givH~d  141 (292)
T cd06657          69 VIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQGVIHRD  141 (292)
T ss_pred             HHHHhcCCcchhheeeEEEe--CCEEEEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            34567789999999998876  5678999999999999987642     2488999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       142 l~p~Nilv~~~~~~~l~dfg~  162 (292)
T cd06657         142 IKSDSILLTHDGRVKLSDFGF  162 (292)
T ss_pred             CCHHHEEECCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.70  E-value=3e-18  Score=136.16  Aligned_cols=95  Identities=26%  Similarity=0.446  Sum_probs=83.0

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .....+ +||||+++++.+...+....++||||+.+ +|..++..    + .+++..++.++.|++.||.|||++||+||
T Consensus        58 ~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~  131 (337)
T cd07852          58 MFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRA----N-ILEDVHKRYIMYQLLKALKYIHSGNVIHR  131 (337)
T ss_pred             HHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhc----C-CCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence            456677 89999999998765444568999999985 99888753    1 58889999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||+++.++.+||+|||.
T Consensus       132 dl~p~nill~~~~~~kl~d~g~  153 (337)
T cd07852         132 DLKPSNILLNSDCRVKLADFGL  153 (337)
T ss_pred             CCCHHHEEEcCCCcEEEeeccc
Confidence            9999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.70  E-value=1.4e-18  Score=134.38  Aligned_cols=94  Identities=14%  Similarity=0.270  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....+.|+|++++.+.+.+  +...++||||+++|+|.+++..     ..+++..+..++.|++.|++|+|+++++|+|
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~d  126 (277)
T cd06640          54 TVLSQCDSPYVTKYYGSYLK--GTKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             HHHHhCCCCCEeeEEEEEEE--CCEEEEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccCcC
Confidence            34567789999999999876  5689999999999999998853     2588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.++|+|||.
T Consensus       127 l~p~Nil~~~~~~~~l~dfg~  147 (277)
T cd06640         127 IKAANVLLSEQGDVKLADFGV  147 (277)
T ss_pred             CChhhEEEcCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG1095|consensus

Probab=99.70  E-value=3.3e-18  Score=147.74  Aligned_cols=99  Identities=20%  Similarity=0.286  Sum_probs=88.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH---HhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---QKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++.+++.+  ....++++||+++|||..+|++.+   .+...++..+...++.|+++|+.||+++++|
T Consensus       747 ~~m~~f~HpNiv~liGv~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fv  824 (1025)
T KOG1095|consen  747 LLMSKFDHPNIVSLIGVCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFV  824 (1025)
T ss_pred             HHHhcCCCcceeeEEEeecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCc
Confidence            45678999999999999987  567899999999999999998752   1123588889999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||-..|+|++...+|||+|||+
T Consensus       825 HRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  825 HRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             CcchhhhheeecccCcEEEcccch
Confidence            999999999999999999999985

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.70  E-value=2.4e-18  Score=136.68  Aligned_cols=95  Identities=24%  Similarity=0.380  Sum_probs=81.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ..++.++|+|++++++.+....   ...+++++||+.+ +|.+++..     ..+++..++.++.|+++||.|||++||+
T Consensus        55 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~~iv  128 (336)
T cd07849          55 KILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSANVL  128 (336)
T ss_pred             HHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4566778999999998765422   1347899999986 88877643     2589999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+||+++.++.+||+|||.
T Consensus       129 H~dlkp~Nill~~~~~~kl~dfg~  152 (336)
T cd07849         129 HRDLKPSNLLLNTNCDLKICDFGL  152 (336)
T ss_pred             ccCCCHHHEEECCCCCEEECcccc
Confidence            999999999999999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.70  E-value=5.3e-18  Score=131.78  Aligned_cols=94  Identities=21%  Similarity=0.305  Sum_probs=82.6

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ....+ +||+++.+.+.+..  +...++||||+++|+|.+++..    +..+++..+..++.|+++||.|||+++++|||
T Consensus        57 ~l~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~d  130 (288)
T cd05583          57 VLEAVRRCPFLVTLHYAFQT--DTKLHLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLGIIYRD  130 (288)
T ss_pred             HHHhccCCcchhhhheeeec--CCEEEEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            34455 69999999988865  4678899999999999998854    23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||.||+++.++.+||+|||.
T Consensus       131 l~p~nil~~~~~~~~l~dfg~  151 (288)
T cd05583         131 IKLENILLDSEGHVVLTDFGL  151 (288)
T ss_pred             CCHHHeEECCCCCEEEEECcc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.69  E-value=3.6e-18  Score=130.96  Aligned_cols=96  Identities=19%  Similarity=0.289  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      ...+.+.|||++++.+.+..  .+..++++||+++++|.+++....   ..+++..+..++.|+++|+.|+|+ .|++||
T Consensus        51 ~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~  125 (265)
T cd06605          51 DILHKCNSPYIVGFYGAFYN--NGDISICMEYMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKHKIIHR  125 (265)
T ss_pred             HHHHHCCCCchhhhheeeec--CCEEEEEEEecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCCCeecC
Confidence            34456779999999998876  468899999999999999986532   468999999999999999999999 999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||+++.++.+||+|||.
T Consensus       126 dl~~~ni~~~~~~~~~l~d~g~  147 (265)
T cd06605         126 DVKPSNILVNSRGQIKLCDFGV  147 (265)
T ss_pred             CCCHHHEEECCCCCEEEeeccc
Confidence            9999999999999999999973

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2.8e-18  Score=132.39  Aligned_cols=94  Identities=16%  Similarity=0.276  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  +..+++|+||+++++|.+++...     .+++..++.++.|++.|+.|+|+++++|||
T Consensus        51 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d  123 (274)
T cd06609          51 QFLSQCRSPYITKYYGSFLK--GSKLWIIMEYCGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEEGKIHRD  123 (274)
T ss_pred             HHHHHcCCCCeeeeeEEEEE--CCeEEEEEEeeCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            34566789999999998875  46789999999999999998642     589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.++|+|||.
T Consensus       124 l~p~ni~i~~~~~~~l~d~g~  144 (274)
T cd06609         124 IKAANILLSEEGDVKLADFGV  144 (274)
T ss_pred             CCHHHEEECCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0695|consensus

Probab=99.69  E-value=3e-18  Score=130.65  Aligned_cols=92  Identities=25%  Similarity=0.382  Sum_probs=84.2

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      +.-+||++|.|...|.+  ..++++|.||..||||.-.++..+    .++|+.++-|...|+.||.|||++|||.||+|.
T Consensus       306 ~asn~pflvglhscfqt--esrlffvieyv~ggdlmfhmqrqr----klpeeharfys~ei~lal~flh~rgiiyrdlkl  379 (593)
T KOG0695|consen  306 QASNNPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLALNFLHERGIIYRDLKL  379 (593)
T ss_pred             hccCCCeEEehhhhhcc--cceEEEEEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccc
Confidence            45679999999999987  568999999999999998886533    499999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      .|+|+|.+|++||+|||+
T Consensus       380 dnvlldaeghikltdygm  397 (593)
T KOG0695|consen  380 DNVLLDAEGHIKLTDYGM  397 (593)
T ss_pred             cceEEccCCceeecccch
Confidence            999999999999999984

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.69  E-value=4e-18  Score=133.61  Aligned_cols=97  Identities=20%  Similarity=0.349  Sum_probs=82.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ...+.++|||++++++.+....      ....++||||+.+ +|.+++...   ...+++..++.++.|+++||.|||++
T Consensus        63 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~  138 (310)
T cd07865          63 KILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRN  138 (310)
T ss_pred             HHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567888999999998775432      1245899999986 888887542   23589999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |++||||||+||+++.++.+||+|||.
T Consensus       139 ~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865         139 KILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             CeeccCCCHHHEEECCCCcEEECcCCC
Confidence            999999999999999999999999983

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.69  E-value=4.9e-18  Score=129.63  Aligned_cols=96  Identities=29%  Similarity=0.459  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  +...++++||+++++|.+++...  ....+++..+..++.|+++|+.|||+++++|||
T Consensus        51 ~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~d  126 (257)
T cd08225          51 ILLAKMKHPNIVTFFASFQE--NGRLFIVMEYCDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDRKILHRD  126 (257)
T ss_pred             HHHHhCCCCChhhhhheecc--CCeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45667789999999998865  56789999999999999998652  233578999999999999999999999999999


Q ss_pred             cchhhhhhhccc-eeeccccc
Q psy18117        195 ERETFLSVLGDC-VRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~-~~ki~D~~  214 (215)
                      |||+||++++++ .+||+||+
T Consensus       127 l~~~nil~~~~~~~~~l~d~~  147 (257)
T cd08225         127 IKSQNIFLSKNGMVAKLGDFG  147 (257)
T ss_pred             CCHHHEEEcCCCCeEEecccc
Confidence            999999999886 67999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.69  E-value=6.7e-18  Score=123.36  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=60.4

Q ss_pred             HHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH-HhCCccccccchhhhhhhccceeecccccC
Q psy18117        141 FLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYV-HSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       141 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~l-H~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++||||++++++...+..    ...+++..+..++.|++.+|.++ |+.||+||||||+|||++ ++.++|+|||.
T Consensus        93 ~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~  163 (190)
T cd05147          93 VLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQ  163 (190)
T ss_pred             EEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccc
Confidence            799999999777654322    23588999999999999999999 699999999999999998 57899999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.69  E-value=6.3e-18  Score=128.50  Aligned_cols=95  Identities=27%  Similarity=0.345  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++++.+..  +..++++|||+++++|.+++...    ..+++..+..++.|+++|+.|+|+++++|+|
T Consensus        45 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~  118 (250)
T cd05123          45 NILSRINHPFIVKLHYAFQT--EEKLYLVLEYAPGGELFSHLSKE----GRFSEERARFYAAEIVLALEYLHSLGIIYRD  118 (250)
T ss_pred             HHHHHcCCCcHHHHHHHeec--CCeeEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            34567779999999998875  56899999999999999998642    3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.++|+||+.
T Consensus       119 l~p~ni~~~~~~~~~l~d~~~  139 (250)
T cd05123         119 LKPENILLDADGHIKLTDFGL  139 (250)
T ss_pred             CCcceEEEcCCCcEEEeecCc
Confidence            999999999999999999974

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.69  E-value=4.7e-18  Score=133.36  Aligned_cols=95  Identities=18%  Similarity=0.245  Sum_probs=83.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+.+  ++..++|+||+.+ ++.+++...   ...+++..+..++.|++.||.|||++||+|||
T Consensus        67 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~g-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~d  140 (307)
T cd06607          67 RFLQQLRHPNTIEYKGCYLR--EHTAWLVMEYCLG-SASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSHERIHRD  140 (307)
T ss_pred             HHHHhCCCCCEEEEEEEEEe--CCeEEEEHHhhCC-CHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            45667899999999999876  4678999999985 888777532   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       141 l~p~nIl~~~~~~~kL~dfg~  161 (307)
T cd06607         141 IKAGNILLTEPGTVKLADFGS  161 (307)
T ss_pred             CCcccEEECCCCCEEEeecCc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.69  E-value=3.8e-18  Score=132.41  Aligned_cols=95  Identities=17%  Similarity=0.234  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~Hr  193 (215)
                      .+...++|||++++.+.+..  ...+++||||+++|+|.+++..    ...+++..+..++.|++.|+.|||+ .+++||
T Consensus        55 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~  128 (284)
T cd06620          55 QIMHECRSPYIVSFYGAFLN--ENNICMCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHR  128 (284)
T ss_pred             HHHHHcCCCCcceEeeeEec--CCEEEEEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence            44567889999999999876  4678999999999999998854    2358999999999999999999997 699999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+||+++.++.++|+|||.
T Consensus       129 dl~p~nil~~~~~~~~l~d~gl  150 (284)
T cd06620         129 DIKPSNILVNSRGQIKLCDFGV  150 (284)
T ss_pred             CCCHHHEEECCCCcEEEccCCc
Confidence            9999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.69  E-value=8.1e-18  Score=129.64  Aligned_cols=101  Identities=18%  Similarity=0.284  Sum_probs=82.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh----HHHHHHhhhcCCChHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ----ELFLVLELADQGDLALVIAECR--QKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~----~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ...+.++|||++++++.+......    ..++++||+.+|+|..++....  .+...+++..++.++.|++.|++|||++
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~  132 (273)
T cd05074          53 ACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK  132 (273)
T ss_pred             HHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456678899999999877543221    2356789999999998875422  1223578899999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+||+++.++.+||+|||.
T Consensus       133 ~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074         133 NFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             CEeecccchhhEEEcCCCCEEECcccc
Confidence            999999999999999999999999973

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=3.8e-18  Score=129.88  Aligned_cols=94  Identities=28%  Similarity=0.462  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|++++++.+.+..  ++..++++||+++++|.+++...    ..+++..++.++.|++.|+.|+|++||+|||
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d  124 (254)
T cd06627          51 DLLKNLKHPNIVKYIGSIET--SDSLYIILEYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLHEQGVIHRD  124 (254)
T ss_pred             HHHHhCCCCCccEEEEEEEe--CCEEEEEEecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence            34556789999999988765  46789999999999999998653    4689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+||+
T Consensus       125 l~p~ni~i~~~~~~~l~d~~  144 (254)
T cd06627         125 IKAANILTTKDGVVKLADFG  144 (254)
T ss_pred             CCHHHEEECCCCCEEEeccc
Confidence            99999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.68  E-value=5.4e-18  Score=130.03  Aligned_cols=97  Identities=22%  Similarity=0.395  Sum_probs=84.9

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      .++.++|+|++.+.+.+..  ++..++++|++++++|.+++..... ...+++..+..++.|++.|+.|||++||+||||
T Consensus        52 ~l~~l~~~~i~~~~~~~~~--~~~~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l  128 (267)
T cd06610          52 AMSQCNHPNVVKYYTSFVV--GDELWLVMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDI  128 (267)
T ss_pred             HHHhcCCCCEEEEEEEEee--CCEEEEEEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            3556789999999988765  5678999999999999999865321 235899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||++++++.+||+|||.
T Consensus       129 ~p~ni~~~~~~~~~l~df~~  148 (267)
T cd06610         129 KAGNILLGEDGSVKIADFGV  148 (267)
T ss_pred             CHHhEEEcCCCCEEEcccch
Confidence            99999999999999999974

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.68  E-value=8.6e-18  Score=133.59  Aligned_cols=96  Identities=22%  Similarity=0.408  Sum_probs=82.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ..++.++|+|++++.+.+.....   ..+++++||+.+ +|.+++..    ...+++..+..++.|++.||.|||+++++
T Consensus        56 ~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~  130 (337)
T cd07858          56 KLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSANVL  130 (337)
T ss_pred             HHHHhcCCCCccchHHheecccccccCcEEEEEeCCCC-CHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            45667789999999998764321   247899999974 89888754    34699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+||+++.++.+||+|||.
T Consensus       131 H~dlkp~Nil~~~~~~~kL~Dfg~  154 (337)
T cd07858         131 HRDLKPSNLLLNANCDLKICDFGL  154 (337)
T ss_pred             cCCCCHHHEEEcCCCCEEECcCcc
Confidence            999999999999999999999984

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.68  E-value=6.5e-18  Score=129.35  Aligned_cols=94  Identities=26%  Similarity=0.364  Sum_probs=84.4

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRG  194 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrD  194 (215)
                      ....++|+|++++.+.+..  +...++++||+++++|.+++...    ..+++..+..++.|+++|+.|+|+ ++++|||
T Consensus        52 ~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~  125 (264)
T cd06623          52 TLRSCESPYVVKCYGAFYK--EGEISIVLEYMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKRHIIHRD  125 (264)
T ss_pred             HHHhcCCCCeeeEEEEEcc--CCeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccCCCccCC
Confidence            3455679999999998876  46899999999999999998652    468999999999999999999999 9999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       126 l~~~ni~~~~~~~~~l~df~~  146 (264)
T cd06623         126 IKPSNLLINSKGEVKIADFGI  146 (264)
T ss_pred             CCHHHEEECCCCCEEEccCcc
Confidence            999999999999999999973

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.68  E-value=4.9e-18  Score=131.85  Aligned_cols=95  Identities=25%  Similarity=0.426  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|+|++++++.+..  ....++++||+++++|.+++....   ..+++..+..++.|++.||.|||++|++|+|
T Consensus        67 ~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~d  141 (286)
T cd06614          67 LIMKDCKHPNIVDYYDSYLV--GDELWVVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQNVIHRD  141 (286)
T ss_pred             HHHHHCCCCCeeEEEEEEEE--CCEEEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            44567789999999998876  468899999999999999997633   2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+||+
T Consensus       142 l~p~ni~i~~~~~~~l~d~~  161 (286)
T cd06614         142 IKSDNILLSKDGSVKLADFG  161 (286)
T ss_pred             CChhhEEEcCCCCEEECccc
Confidence            99999999999999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.68  E-value=5.3e-18  Score=131.61  Aligned_cols=95  Identities=31%  Similarity=0.385  Sum_probs=82.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|+|++++.+.+..  ++..++++||++++.+..++..    ...+++..++.++.|++.|+.|||+++++|||
T Consensus        52 ~~l~~l~~~~i~~~~~~~~~--~~~~~iv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  125 (288)
T cd07833          52 KVLRQLRHENIVNLKEAFRR--KGRLYLVFEYVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD  125 (288)
T ss_pred             HHHHhcCCCCeeehhheEEE--CCEEEEEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45567789999999999876  5678999999998666655432    34589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       126 l~~~ni~~~~~~~~kl~d~g~  146 (288)
T cd07833         126 IKPENILVSESGVLKLCDFGF  146 (288)
T ss_pred             CCHHHeEECCCCCEEEEeeec
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.68  E-value=2.1e-17  Score=144.77  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=71.4

Q ss_pred             CccCCC-cchhhhhhhhcCC-----chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        117 DKTLHH-PNIVELRSAFASR-----SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       117 ~~~l~h-~~iv~l~~~~~~~-----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+.+.| +||..+++.|...     ....+..++|++.+ +|.++|...   ...+++..++.++.||++||.|||++||
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~gI  101 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDV-SLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQGI  101 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccCCc-cHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            345566 6888888877211     12457788998765 999999631   3359999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccc
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQ  213 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~  213 (215)
                      +||||||+||||+..|.+|++||
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~  124 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIES  124 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeec
Confidence            99999999999965444444444

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.68  E-value=5e-18  Score=134.78  Aligned_cols=94  Identities=21%  Similarity=0.299  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|+|++++.+.+..  .+..+++|||+++ +|.+++..    +..+++..+..++.|++.||.|||++||+|||
T Consensus        72 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~d  144 (335)
T PTZ00024         72 KIMNEIKHENIMGLVDVYVE--GDFINLVMDIMAS-DLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWYFMHRD  144 (335)
T ss_pred             HHHHhCCCcceeeeeEEEec--CCcEEEEEecccc-CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            45677889999999998875  5678999999985 99998854    34589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       145 l~~~nill~~~~~~kl~dfg~  165 (335)
T PTZ00024        145 LSPANIFINSKGICKIADFGL  165 (335)
T ss_pred             ccHHHeEECCCCCEEECCccc
Confidence            999999999999999999973

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.68  E-value=3.7e-18  Score=133.45  Aligned_cols=97  Identities=23%  Similarity=0.370  Sum_probs=82.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCc--------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS--------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH  186 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~--------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH  186 (215)
                      .....++|||++++++.+....        ...+++++||+++ ++..++...   ...+++..+..++.|++.||.|||
T Consensus        58 ~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH  133 (302)
T cd07864          58 KILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCH  133 (302)
T ss_pred             HHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4556788999999998876532        1267899999987 787776532   335899999999999999999999


Q ss_pred             hCCccccccchhhhhhhccceeecccccC
Q psy18117        187 SRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++||+||||||+||++++++.+||+|||.
T Consensus       134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~  162 (302)
T cd07864         134 KKNFLHRDIKCSNILLNNKGQIKLADFGL  162 (302)
T ss_pred             hCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence            99999999999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=5.2e-18  Score=131.01  Aligned_cols=88  Identities=20%  Similarity=0.403  Sum_probs=79.9

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      ..|||++++.+.+..  +...+++|||+++++|.+++..     ..+++..+..++.|+++|+.|||++||+||||||+|
T Consensus        59 ~~~~~vi~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~n  131 (277)
T cd06917          59 SQPPNITKYYGSYLK--GPRLWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAAN  131 (277)
T ss_pred             CCCCCeeeEeeeeee--CCEEEEEEecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHH
Confidence            359999999998865  4678999999999999998753     258899999999999999999999999999999999


Q ss_pred             hhhhccceeeccccc
Q psy18117        200 LSVLGDCVRTVSEQA  214 (215)
Q Consensus       200 il~~~~~~~ki~D~~  214 (215)
                      |+++.++.+||+|||
T Consensus       132 i~i~~~~~~~l~dfg  146 (277)
T cd06917         132 ILVTNTGNVKLCDFG  146 (277)
T ss_pred             EEEcCCCCEEEccCC
Confidence            999999999999997

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00284 protein kinase; Provisional

Probab=99.68  E-value=8.4e-18  Score=139.23  Aligned_cols=89  Identities=11%  Similarity=0.116  Sum_probs=73.7

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccchh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERET  198 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp~  198 (215)
                      ..|.+++.+.++|... ....++|||++ +++|.+++..    ...+++..++.++.||+.||.|||+ .|||||||||+
T Consensus       188 ~~~~~i~~i~~~~~~~-~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~  261 (467)
T PTZ00284        188 ADRFPLMKIQRYFQNE-TGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPE  261 (467)
T ss_pred             ccCcceeeeEEEEEcC-CceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHH
Confidence            3456688888777653 34678899988 4589988854    3469999999999999999999998 59999999999


Q ss_pred             hhhhhccc----------------eeeccccc
Q psy18117        199 FLSVLGDC----------------VRTVSEQA  214 (215)
Q Consensus       199 Nil~~~~~----------------~~ki~D~~  214 (215)
                      |||++.++                .+||+|||
T Consensus       262 NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG  293 (467)
T PTZ00284        262 NILMETSDTVVDPVTNRALPPDPCRVRICDLG  293 (467)
T ss_pred             HEEEecCCcccccccccccCCCCceEEECCCC
Confidence            99998765                49999998

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=3.1e-18  Score=135.84  Aligned_cols=84  Identities=20%  Similarity=0.088  Sum_probs=68.1

Q ss_pred             cCCccCCCcchhh-hhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVE-LRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~-l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.++|+|++. ++.      .+..++||||+++++|... .  .     ..   ...++.|+++||.|||++||+||
T Consensus        73 ~iL~~L~h~~iv~~l~~------~~~~~LVmE~~~G~~L~~~-~--~-----~~---~~~~~~~i~~aL~~lH~~gIiHr  135 (365)
T PRK09188         73 RALKTVRGIGVVPQLLA------TGKDGLVRGWTEGVPLHLA-R--P-----HG---DPAWFRSAHRALRDLHRAGITHN  135 (365)
T ss_pred             HHHHhccCCCCCcEEEE------cCCcEEEEEccCCCCHHHh-C--c-----cc---hHHHHHHHHHHHHHHHHCCCeeC
Confidence            5677888999885 432      1357999999999999632 1  0     11   14688999999999999999999


Q ss_pred             cc-chhhhhhhccceeecccccC
Q psy18117        194 GE-RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Di-kp~Nil~~~~~~~ki~D~~~  215 (215)
                      || ||+|||++.++.+||+|||.
T Consensus       136 DL~KP~NILv~~~~~ikLiDFGl  158 (365)
T PRK09188        136 DLAKPQNWLMGPDGEAAVIDFQL  158 (365)
T ss_pred             CCCCcceEEEcCCCCEEEEECcc
Confidence            99 99999999999999999984

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.68  E-value=1.2e-17  Score=132.17  Aligned_cols=96  Identities=25%  Similarity=0.377  Sum_probs=83.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      ..++.++|+|++++.+.+....   ...++++|||+.+ +|.+++..    +..+++..++.++.|+++||.|||++||+
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~gi~  125 (330)
T cd07834          51 KLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSANVI  125 (330)
T ss_pred             HHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4556778999999999887632   1367899999986 88888753    33699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       126 H~dlkp~nili~~~~~~~L~dfg~  149 (330)
T cd07834         126 HRDLKPSNILVNSNCDLKICDFGL  149 (330)
T ss_pred             cCCCCHHHEEEcCCCCEEEcccCc
Confidence            999999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.68  E-value=3.9e-18  Score=131.84  Aligned_cols=93  Identities=15%  Similarity=0.271  Sum_probs=83.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  +...++||||+++++|.+++..     ..+++..+..++.|++.|+.|||++|++|+|
T Consensus        54 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d  126 (277)
T cd06641          54 TVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEKKIHRD  126 (277)
T ss_pred             HHHHhcCCCCEeEEEEEEEe--CCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCCeecCC
Confidence            34556789999999998876  4678999999999999998853     3588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.++|+|||
T Consensus       127 l~p~Ni~i~~~~~~~l~dfg  146 (277)
T cd06641         127 IKAANVLLSEHGEVKLADFG  146 (277)
T ss_pred             CCHHhEEECCCCCEEEeecc
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.68  E-value=1.5e-17  Score=128.77  Aligned_cols=94  Identities=28%  Similarity=0.455  Sum_probs=82.6

Q ss_pred             CccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ...++ |+|++++++.+..  ++..++||||+ +|+|.+++....  ...+++..+..++.|++.||.|||++|++|+||
T Consensus        51 l~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl  125 (283)
T cd07830          51 LRKLNEHPNIVKLKEVFRE--NDELYFVFEYM-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL  125 (283)
T ss_pred             HHhccCCCCchhHHHHhhc--CCcEEEEEecC-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            44556 9999999999876  56889999999 679998886522  235899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||+++.++.+||+|||.
T Consensus       126 ~~~ni~i~~~~~~~l~d~~~  145 (283)
T cd07830         126 KPENLLVSGPEVVKIADFGL  145 (283)
T ss_pred             ChhhEEEcCCCCEEEeeccc
Confidence            99999999999999999973

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG1027|consensus

Probab=99.67  E-value=1.9e-18  Score=144.29  Aligned_cols=102  Identities=22%  Similarity=0.233  Sum_probs=79.5

Q ss_pred             CCcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        111 SGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       111 ~~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      +|+......-+|||||+++..-.  +.+.+|+..|.|.. +|.++++..............+..+.|+++||++||+.+|
T Consensus       551 rEi~lL~eSD~H~NviRyyc~E~--d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i  627 (903)
T KOG1027|consen  551 REIQLLQESDEHPNVIRYYCSEQ--DRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI  627 (903)
T ss_pred             HHHHHHHhccCCCceEEEEeecc--CCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc
Confidence            34434455667999999886544  36789999999998 9999997631111112225568889999999999999999


Q ss_pred             cccccchhhhhhhc---c--ceeecccccC
Q psy18117        191 LHRGERETFLSVLG---D--CVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~---~--~~~ki~D~~~  215 (215)
                      |||||||+||||+.   +  ..++|+|||+
T Consensus       628 VHRDLkPQNILI~~~~~~~~~ra~iSDfgl  657 (903)
T KOG1027|consen  628 VHRDLKPQNILISVPSADGTLRAKISDFGL  657 (903)
T ss_pred             ccccCCCceEEEEccCCCcceeEEeccccc
Confidence            99999999999976   3  3899999985

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.67  E-value=8.5e-18  Score=130.05  Aligned_cols=90  Identities=29%  Similarity=0.349  Sum_probs=79.3

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+|+|++++++.+.+...+.+++||||+++ +|.+.+...   +..+++..+..++.|++.||.|||++|++||||||+|
T Consensus        55 ~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~n  130 (282)
T cd07831          55 SPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPEN  130 (282)
T ss_pred             CCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHH
Confidence            359999999999876434678999999985 888887542   2468999999999999999999999999999999999


Q ss_pred             hhhhccceeeccccc
Q psy18117        200 LSVLGDCVRTVSEQA  214 (215)
Q Consensus       200 il~~~~~~~ki~D~~  214 (215)
                      |+++. +.+||+|||
T Consensus       131 i~l~~-~~~kl~dfg  144 (282)
T cd07831         131 ILIKD-DILKLADFG  144 (282)
T ss_pred             EEEcC-CCeEEEecc
Confidence            99999 999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.67  E-value=7.4e-18  Score=134.30  Aligned_cols=95  Identities=23%  Similarity=0.369  Sum_probs=80.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      ..++.++||||+++.+.+.....    ...++||||+ +++|..++..     ..+++..++.++.|+++|+.|||++||
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~gi  139 (343)
T cd07880          66 RLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAAGI  139 (343)
T ss_pred             HHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45677889999999998865321    1347899998 5599888743     258999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||+++.++.+||+|||.
T Consensus       140 ~H~dlkp~Nill~~~~~~kl~dfg~  164 (343)
T cd07880         140 IHRDLKPGNLAVNEDCELKILDFGL  164 (343)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeeccc
Confidence            9999999999999999999999983

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.67  E-value=1e-17  Score=129.62  Aligned_cols=94  Identities=33%  Similarity=0.482  Sum_probs=83.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|++++++++.+..  +..+++++||+++ +|.+++....   ..+++..+..++.|+++||.|||+++|+|||
T Consensus        50 ~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~~~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d  123 (283)
T cd05118          50 KLLKELNHPNIIKLLDVFRH--KGDLYLVFEFMDT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSHGILHRD  123 (283)
T ss_pred             HHHHHhcCCCcchHHHhhcc--CCCEEEEEeccCC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            45567789999999999876  4688999999986 9988876522   3689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       124 l~p~nili~~~~~~~l~df~  143 (283)
T cd05118         124 LKPENLLINTEGVLKLADFG  143 (283)
T ss_pred             cCHHHEEECCCCcEEEeeee
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.67  E-value=7.3e-18  Score=131.37  Aligned_cols=96  Identities=27%  Similarity=0.354  Sum_probs=81.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +...++||||+++ +|.+++....  ...+++..++.++.||+.||+|||+++++|||
T Consensus        53 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~d  127 (294)
T PLN00009         53 SLLKEMQHGNIVRLQDVVHS--EKRLYLVFEYLDL-DLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRD  127 (294)
T ss_pred             HHHHhccCCCEeeEEEEEec--CCeEEEEEecccc-cHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            45667889999999999875  5689999999975 8888875422  22467888999999999999999999999999


Q ss_pred             cchhhhhhhc-cceeecccccC
Q psy18117        195 ERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      |||+||+++. ++.+||+|||.
T Consensus       128 l~p~nill~~~~~~~kl~dfg~  149 (294)
T PLN00009        128 LKPQNLLIDRRTNALKLADFGL  149 (294)
T ss_pred             CCcceEEEECCCCEEEEccccc
Confidence            9999999985 45899999974

>KOG1006|consensus

Probab=99.67  E-value=1.1e-17  Score=123.69  Aligned_cols=96  Identities=20%  Similarity=0.260  Sum_probs=81.5

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHH-HHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAE-CRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRG  194 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~-~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrD  194 (215)
                      .+.-+.||||++++++..  ++..++.||+++- +|+.+.+. ...++..++|...-.+..-.+.||+||-. ..|||||
T Consensus       117 mks~~cp~IVkfyGa~F~--EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRD  193 (361)
T KOG1006|consen  117 MKSSNCPNIVKFYGALFS--EGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRD  193 (361)
T ss_pred             HhhcCCcHHHHHhhhhhc--CCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhcc
Confidence            345567999999999876  6789999999998 88876432 22445679999999999999999999984 6999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|||++..|.+||||||.
T Consensus       194 vKPSNILldr~G~vKLCDFGI  214 (361)
T KOG1006|consen  194 VKPSNILLDRHGDVKLCDFGI  214 (361)
T ss_pred             CChhheEEecCCCEeeecccc
Confidence            999999999999999999984

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.67  E-value=7.8e-18  Score=130.43  Aligned_cols=97  Identities=28%  Similarity=0.463  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+........++|+||+++ +|..++...   ...+++..++.++.|+++|+.|||++|++|+|
T Consensus        50 ~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~d  125 (287)
T cd07840          50 KLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNGILHRD  125 (287)
T ss_pred             HHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            45567789999999999876323679999999986 898887542   23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||++++++.+||+|||.
T Consensus       126 l~p~nil~~~~~~~~l~d~g~  146 (287)
T cd07840         126 IKGSNILINNDGVLKLADFGL  146 (287)
T ss_pred             CcHHHeEEcCCCCEEEccccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.67  E-value=8.7e-18  Score=131.75  Aligned_cols=97  Identities=23%  Similarity=0.384  Sum_probs=81.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ..++.++|||++++++.+....      ...+++++||+.+ +|...+..   ....+++..++.++.|+++||.|||++
T Consensus        59 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~  134 (311)
T cd07866          59 KILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHEN  134 (311)
T ss_pred             HHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4566788999999998875432      1246899999986 77777643   233699999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+||++++++.+||+|||.
T Consensus       135 ~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866         135 HILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             CeecCCCCHHHEEECCCCCEEECcCcc
Confidence            999999999999999999999999973

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.67  E-value=1.3e-17  Score=129.20  Aligned_cols=96  Identities=30%  Similarity=0.394  Sum_probs=83.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++++.+..  +...++++||++ ++|.+++...+  ...+++..+..++.|+++||+|||+++++|||
T Consensus        50 ~~l~~l~~~~iv~~~~~~~~--~~~~~iv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~d  124 (283)
T cd07835          50 SLLKELNHPNIVRLLDVVHS--ENKLYLVFEFLD-LDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRD  124 (283)
T ss_pred             HHHHhcCCCCccCHhheecc--CCeEEEEEeccC-cCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            44567789999999999876  568899999996 49999886532  13589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+||+.
T Consensus       125 l~p~nil~~~~~~~~l~df~~  145 (283)
T cd07835         125 LKPQNLLIDREGALKLADFGL  145 (283)
T ss_pred             CCHHHEEEcCCCcEEEeeccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG1035|consensus

Probab=99.66  E-value=1.4e-17  Score=143.88  Aligned_cols=71  Identities=21%  Similarity=0.398  Sum_probs=61.7

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        140 LFLVLELADQGDLALVIAECRQKKCHL--AECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i~~~~~~~~~~--~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+=||||+.-.+.++|...     .+  .....|++|+||++||.|+|++|||||||||.||.+++++.|||.|||.
T Consensus       671 LYIQMEyCE~~ll~~iI~~N-----~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGL  743 (1351)
T KOG1035|consen  671 LYIQMEYCEKTLLRDIIRRN-----HFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGL  743 (1351)
T ss_pred             EEEEHhhhhhhHHHHHHHhc-----ccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeeccccc
Confidence            57789999996666666442     23  4678999999999999999999999999999999999999999999984

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.66  E-value=2.8e-17  Score=130.43  Aligned_cols=90  Identities=30%  Similarity=0.367  Sum_probs=76.1

Q ss_pred             CCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        121 HHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      +||||+++++.+...  ....+++++||+.+ +|.+++..    ...+++..++.++.|++.||.|||++||+||||||+
T Consensus        60 ~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~  134 (332)
T cd07857          60 GHKNITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPG  134 (332)
T ss_pred             CCCChheeeeeeeeccccCCcEEEEEecccC-CHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            599999988764321  12356788898875 99988853    346899999999999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      ||+++.++.+||+|||.
T Consensus       135 Nili~~~~~~kl~Dfg~  151 (332)
T cd07857         135 NLLVNADCELKICDFGL  151 (332)
T ss_pred             HeEEcCCCCEEeCcCCC
Confidence            99999999999999984

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.66  E-value=1.3e-17  Score=131.44  Aligned_cols=95  Identities=17%  Similarity=0.237  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..++.++|||++++.+.+..  +...++||||+.+ +|.+.+...   +..+++..+..++.|++.|+.|||++||+|||
T Consensus        77 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~g-~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~d  150 (317)
T cd06635          77 KFLQRIKHPNSIEYKGCYLR--EHTAWLVMEYCLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRD  150 (317)
T ss_pred             HHHHhCCCCCEEEEEEEEee--CCeEEEEEeCCCC-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567889999999998876  4578899999985 888876542   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       151 L~p~Nil~~~~~~~kl~dfg~  171 (317)
T cd06635         151 IKAGNILLTEPGQVKLADFGS  171 (317)
T ss_pred             CCcccEEECCCCCEEEecCCC
Confidence            999999999999999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.66  E-value=4e-17  Score=126.24  Aligned_cols=95  Identities=32%  Similarity=0.415  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ....++|+||+++ +|.+++....   ..+++..+..++.|++.||.|||++||+|||
T Consensus        50 ~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e~~~~-~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~  123 (282)
T cd07829          50 SLLKELKHPNIVKLLDVIHT--ERKLYLVFEYCDM-DLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSHRILHRD  123 (282)
T ss_pred             HHHHhcCCCCHHHHHhhhhc--CCceEEEecCcCc-CHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            34566779999999999876  4689999999985 9999987532   3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       124 l~~~ni~~~~~~~~~l~d~g~  144 (282)
T cd07829         124 LKPQNILINRDGVLKLADFGL  144 (282)
T ss_pred             CChheEEEcCCCCEEEecCCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0587|consensus

Probab=99.65  E-value=1.7e-17  Score=139.34  Aligned_cols=96  Identities=22%  Similarity=0.407  Sum_probs=85.7

Q ss_pred             ccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        118 KTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..-.|||++.++.+|.-.+   ++.++||||||.+|++-++++...  ...+.|..+..+.+.++.|+.+||.+.++|||
T Consensus        71 ~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD  148 (953)
T KOG0587|consen   71 KYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNKVIHRD  148 (953)
T ss_pred             hccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence            3456999999998875322   467999999999999999998744  56799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||-.|||++.++.||++|||.
T Consensus       149 ikG~NiLLT~e~~VKLvDFGv  169 (953)
T KOG0587|consen  149 IKGQNVLLTENAEVKLVDFGV  169 (953)
T ss_pred             ccCceEEEeccCcEEEeeeee
Confidence            999999999999999999983

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.65  E-value=1.8e-17  Score=132.12  Aligned_cols=95  Identities=26%  Similarity=0.365  Sum_probs=79.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .....++||||+++.+.+....    ....+++++++ +++|.+++..     ..+++..++.++.|+++|+.|||++||
T Consensus        68 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~i  141 (345)
T cd07877          68 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADI  141 (345)
T ss_pred             HHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4566789999999998875321    12367788887 5699887743     248999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||+++.++.+||+|||.
T Consensus       142 vH~dlkp~NIll~~~~~~kl~dfg~  166 (345)
T cd07877         142 IHRDLKPSNLAVNEDCELKILDFGL  166 (345)
T ss_pred             eecCCChHHEEEcCCCCEEEecccc
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.65  E-value=2.3e-17  Score=131.45  Aligned_cols=95  Identities=24%  Similarity=0.368  Sum_probs=79.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCch------------hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG------------QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~------------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .+++.++|||++++++.+.....            ...++++||+++ +|.+++..     ..+++..++.++.||++||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----~~l~~~~~~~~~~qi~~aL  127 (342)
T cd07854          54 KIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-----GPLSEEHARLFMYQLLRGL  127 (342)
T ss_pred             HHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHHc-----CCCCHHHHHHHHHHHHHHH
Confidence            45677889999999988765321            235799999985 89887742     2589999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhc-cceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+||+++. ++.+||+|||.
T Consensus       128 ~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~  161 (342)
T cd07854         128 KYIHSANVLHRDLKPANVFINTEDLVLKIGDFGL  161 (342)
T ss_pred             HHHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence            9999999999999999999975 45899999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4278|consensus

Probab=99.65  E-value=1.9e-17  Score=135.17  Aligned_cols=97  Identities=20%  Similarity=0.351  Sum_probs=88.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||+|+|+++|..  .--+|+|+||+..|+|.++|.++.  +..++.-....++.||..|+.||..+++||||
T Consensus       315 AvMKeikHpNLVqLLGVCT~--EpPFYIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkknFIHRD  390 (1157)
T KOG4278|consen  315 AVMKEIKHPNLVQLLGVCTH--EPPFYIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKKNFIHRD  390 (1157)
T ss_pred             HHHHhhcCccHHHHhhhhcc--CCCeEEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            56788999999999999976  456899999999999999998865  44577888888999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |-..|+||.++..|||+|||+
T Consensus       391 LAARNCLVgEnhiVKvADFGL  411 (1157)
T KOG4278|consen  391 LAARNCLVGENHIVKVADFGL  411 (1157)
T ss_pred             hhhhhccccccceEEeeccch
Confidence            999999999999999999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.65  E-value=3.6e-17  Score=119.73  Aligned_cols=71  Identities=13%  Similarity=0.103  Sum_probs=60.2

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccchhhhhhhccceeecccccC
Q psy18117        140 LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .++||||++++++......    ...+++..+..++.|++.++.++|+ +||+||||||+|||++ ++.++|+|||.
T Consensus        92 ~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~  163 (190)
T cd05145          92 NVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQ  163 (190)
T ss_pred             CEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEccc
Confidence            3799999998765443211    1247788999999999999999999 9999999999999998 89999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.65  E-value=1.9e-17  Score=126.10  Aligned_cols=97  Identities=28%  Similarity=0.374  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+........++++||+++++|.+++...    ..+++..++.++.|++.|+.|||+++++|+|
T Consensus        51 ~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~d  126 (260)
T cd06606          51 RILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNGIVHRD  126 (260)
T ss_pred             HHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            445667799999999888763226788999999999999998652    2689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|+||+++.++.+||+||+.
T Consensus       127 l~p~ni~i~~~~~~~l~d~~~  147 (260)
T cd06606         127 IKGANILVDSDGVVKLADFGC  147 (260)
T ss_pred             CCHHHEEEcCCCCEEEccccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.65  E-value=1.5e-17  Score=130.86  Aligned_cols=95  Identities=18%  Similarity=0.247  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|||++++.+.+.+  ....+++|||+.+ ++.+++...   +..+++..+..++.|++.|+.|||++|++|||
T Consensus        73 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~d  146 (313)
T cd06633          73 KFLQQLKHPNTIEYKGCYLK--EHTAWLVMEYCLG-SASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRD  146 (313)
T ss_pred             HHHHhCCCCCCccEEEEEEe--CCEEEEEEecCCC-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45567789999999998876  4678999999975 888877542   34589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       147 l~p~nili~~~~~~kL~dfg~  167 (313)
T cd06633         147 IKAGNILLTEPGQVKLADFGS  167 (313)
T ss_pred             CChhhEEECCCCCEEEeecCC
Confidence            999999999999999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.65  E-value=4.4e-17  Score=126.31  Aligned_cols=95  Identities=29%  Similarity=0.435  Sum_probs=80.9

Q ss_pred             ccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+.|+|++++.+.+.....   ..++++|||+.+ +|.+++....  ...+++..+..++.|+++||.|||+++++|||
T Consensus        56 ~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~  132 (287)
T cd07838          56 ESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRD  132 (287)
T ss_pred             hccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            45579999999998876321   138899999986 8998886532  23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       133 l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838         133 LKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             CChhhEEEccCCCEEEeccCc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.65  E-value=2.2e-17  Score=125.29  Aligned_cols=96  Identities=23%  Similarity=0.362  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|++++++.+.+..  +...++++||+++++|.+++....   ..+++..+..++.|+++|+.|||++|++|||
T Consensus        49 ~~l~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~d  123 (253)
T cd05122          49 QILKKCKHPNIVKYYGSYLK--KDELWIVMEFCSGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSNGIIHRD  123 (253)
T ss_pred             HHHHhCCCCCEeEEEEEEec--CCeEEEEEecCCCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcCCEecCC
Confidence            34556779999999998876  467899999999999999986532   3689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+||+.
T Consensus       124 l~p~ni~i~~~~~~~l~d~~~  144 (253)
T cd05122         124 IKAANILLTSDGEVKLIDFGL  144 (253)
T ss_pred             CCHHHEEEccCCeEEEeeccc
Confidence            999999999999999999973

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.65  E-value=3.1e-17  Score=128.02  Aligned_cols=93  Identities=14%  Similarity=0.178  Sum_probs=71.4

Q ss_pred             ccCCCcchhhhhhhhcCCchh--HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSGQ--ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~--~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ..+.|++++.+++........  ..++++|++.. ++.+.+...    ...++..+..++.|+++||.|||+++|+||||
T Consensus        78 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDi  152 (294)
T PHA02882         78 HNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDI  152 (294)
T ss_pred             ccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            456789999888754432111  12456666654 666665431    23678889999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       153 Kp~Nill~~~~~~~l~DFGl  172 (294)
T PHA02882        153 KPENIMVDGNNRGYIIDYGI  172 (294)
T ss_pred             CHHHEEEcCCCcEEEEEcCC
Confidence            99999999999999999984

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.65  E-value=1.8e-17  Score=131.30  Aligned_cols=94  Identities=26%  Similarity=0.407  Sum_probs=81.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|||++++.+.+... ....++++||+.+ +|..++..     ..+++..+..++.|+++||.|||+++|+|||
T Consensus        61 ~~l~~l~hpniv~~~~~~~~~-~~~~~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d  133 (328)
T cd07856          61 KLLKHLRHENIISLSDIFISP-LEDIYFVTELLGT-DLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSAGVVHRD  133 (328)
T ss_pred             HHHHhcCCCCeeeEeeeEecC-CCcEEEEeehhcc-CHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            456678899999999988643 3467899999854 88887743     2478889999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       134 l~p~Nili~~~~~~~l~dfg~  154 (328)
T cd07856         134 LKPSNILINENCDLKICDFGL  154 (328)
T ss_pred             CCHHHEeECCCCCEEeCcccc
Confidence            999999999999999999973

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.65  E-value=2.2e-17  Score=129.67  Aligned_cols=95  Identities=18%  Similarity=0.255  Sum_probs=82.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++|+|++++.+.+..  ....++||||+.+ ++.+++...   +..+++..+..++.|++.|+.|||+++++|||
T Consensus        67 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~d  140 (308)
T cd06634          67 RFLQKLRHPNTIQYRGCYLR--EHTAWLVMEYCLG-SASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  140 (308)
T ss_pred             HHHHhCCCCCcccEEEEEEc--CCeeEEEEEccCC-CHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45667889999999998876  4678999999974 888877542   23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       141 l~p~nil~~~~~~~kl~dfg~  161 (308)
T cd06634         141 VKAGNILLSEPGLVKLGDFGS  161 (308)
T ss_pred             CCHHhEEECCCCcEEECCccc
Confidence            999999999999999999973

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.64  E-value=3.3e-17  Score=130.55  Aligned_cols=95  Identities=26%  Similarity=0.394  Sum_probs=81.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+.+.++|+|++++.+.+...+.    ...++|+||+. ++|.+++..     ..+++..++.++.|+++|+.|||++||
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~gi  139 (343)
T cd07851          66 RLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAGI  139 (343)
T ss_pred             HHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            44567789999999988765321    23789999985 499988753     358999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||+++.++.+||+|||.
T Consensus       140 ~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851         140 IHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ecCCCCHHHeEECCCCCEEEccccc
Confidence            9999999999999999999999973

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG4257|consensus

Probab=99.64  E-value=3.1e-17  Score=133.73  Aligned_cols=95  Identities=25%  Similarity=0.348  Sum_probs=87.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++++++||+|++|++++..   +-.++|||+|+-|.|..+++.+   +..++......|..||+.||.|||+.++||||
T Consensus       443 ~iMrnfdHphIikLIGv~~e---~P~WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRD  516 (974)
T KOG4257|consen  443 SIMRNFDHPHIIKLIGVCVE---QPMWIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESKRFVHRD  516 (974)
T ss_pred             HHHHhCCCcchhheeeeeec---cceeEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhhchhhhh
Confidence            56789999999999999975   5699999999999999999864   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |-..||||.+..-|||+|||+
T Consensus       517 IAaRNiLVsSp~CVKLaDFGL  537 (974)
T KOG4257|consen  517 IAARNILVSSPQCVKLADFGL  537 (974)
T ss_pred             hhhhheeecCcceeeecccch
Confidence            999999999999999999985

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.64  E-value=4.6e-17  Score=136.97  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             hhHHHHHHhhhcCCChHHHHHHHHH----------------hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        137 GQELFLVLELADQGDLALVIAECRQ----------------KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       137 ~~~~~lv~e~~~~g~L~~~i~~~~~----------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +...++|+||+.+++|.+++.....                ......+..+..++.|++.||.|||+++|+||||||+||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence            4578899999999999998864210                001122445778999999999999999999999999999


Q ss_pred             hhhc-cceeecccccC
Q psy18117        201 SVLG-DCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~-~~~~ki~D~~~  215 (215)
                      |++. ++.+||+|||.
T Consensus       287 Ll~~~~~~~KL~DFGl  302 (566)
T PLN03225        287 IFSEGSGSFKIIDLGA  302 (566)
T ss_pred             EEeCCCCcEEEEeCCC
Confidence            9986 57999999984

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.64  E-value=6.5e-17  Score=125.62  Aligned_cols=92  Identities=17%  Similarity=0.202  Sum_probs=76.8

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH-HhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccchh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR-QKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERET  198 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp~  198 (215)
                      .|+|++++++.+..  +...+++|||+.. ++.++..... .....+++..+..++.|++.||+|||+ .+|+||||||+
T Consensus        61 ~~~~iv~~~~~~~~--~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~  137 (288)
T cd06616          61 DCPYIVKFYGALFR--EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPS  137 (288)
T ss_pred             CCCCEeeeeeEEec--CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHH
Confidence            49999999998765  4577899999886 7666543221 223569999999999999999999997 49999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      ||+++.++.+||+|||.
T Consensus       138 Nil~~~~~~~kl~dfg~  154 (288)
T cd06616         138 NILLDRNGNIKLCDFGI  154 (288)
T ss_pred             HEEEccCCcEEEeecch
Confidence            99999999999999973

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.64  E-value=7.1e-17  Score=126.01  Aligned_cols=92  Identities=17%  Similarity=0.272  Sum_probs=79.4

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGER  196 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDik  196 (215)
                      ....|+|++++++.+..  +...+++|||+.+ ++..++...   ...+++..+..++.|++.|+.|||+ +||+|||||
T Consensus        69 ~~~~~~~i~~~~~~~~~--~~~~~~v~e~~~~-~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~  142 (296)
T cd06618          69 KSHDCPYIVKCYGYFIT--DSDVFICMELMST-CLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVK  142 (296)
T ss_pred             hccCCCchHhhheeeec--CCeEEEEeeccCc-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCc
Confidence            34469999999999876  5689999999865 788776542   2368999999999999999999997 699999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||++++++.+||+|||.
T Consensus       143 p~nill~~~~~~kL~dfg~  161 (296)
T cd06618         143 PSNILLDASGNVKLCDFGI  161 (296)
T ss_pred             HHHEEEcCCCCEEECcccc
Confidence            9999999999999999974

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.63  E-value=5e-17  Score=129.49  Aligned_cols=94  Identities=28%  Similarity=0.403  Sum_probs=79.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      ...+.++|||++++.+.+.....    ...++++||+.. +|..++      ...+++..+..++.|++.||+|||+++|
T Consensus        66 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~i  138 (342)
T cd07879          66 TLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSAGI  138 (342)
T ss_pred             HHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            45667889999999998764321    245899999875 776654      2258899999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+||+++.++.+||+|||.
T Consensus       139 ~H~dlkp~NIll~~~~~~kL~dfg~  163 (342)
T cd07879         139 IHRDLKPGNLAVNEDCELKILDFGL  163 (342)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCCC
Confidence            9999999999999999999999984

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0199|consensus

Probab=99.63  E-value=2.4e-16  Score=130.05  Aligned_cols=96  Identities=27%  Similarity=0.349  Sum_probs=88.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|+++++|+++..+   ..+.+|||+|+.|+|.+.|..  ..+..|.-....+|+.||+.|+.||.++++||||
T Consensus       163 s~M~~L~H~hliRLyGvVl~---qp~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRD  237 (1039)
T KOG0199|consen  163 SHMLKLQHPHLIRLYGVVLD---QPAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRD  237 (1039)
T ss_pred             HHHHhccCcceeEEeeeecc---chhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence            55678999999999999875   578999999999999999976  5677899999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +-..|||+.+...+||||||+
T Consensus       238 LAARNlllasprtVKI~DFGL  258 (1039)
T KOG0199|consen  238 LAARNLLLASPRTVKICDFGL  258 (1039)
T ss_pred             hhhhhheecccceeeeecccc
Confidence            999999999999999999985

>KOG1151|consensus

Probab=99.63  E-value=9.6e-17  Score=126.48  Aligned_cols=96  Identities=23%  Similarity=0.313  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh--CCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS--RRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H  192 (215)
                      .+.+.+.||.||+++++|.- +.+.++-|+|||+|.||+-+|+...    .++|.+++.|.-||++||.||..  -.|||
T Consensus       519 rIHKeLDHpRIVKlYDyfsl-DtdsFCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL~YLNEikpPIIH  593 (775)
T KOG1151|consen  519 RIHKELDHPRIVKLYDYFSL-DTDSFCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNALKYLNEIKPPIIH  593 (775)
T ss_pred             hhhhccCcceeeeeeeeeee-ccccceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHHHHHhccCCCeee
Confidence            45678999999999999874 3568899999999999999997644    59999999999999999999995  47999


Q ss_pred             cccchhhhhhhc---cceeecccccC
Q psy18117        193 RGERETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~---~~~~ki~D~~~  215 (215)
                      -||||.|||+-+   .|.+||+|||+
T Consensus       594 YDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  594 YDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             eccCCccEEEecCcccceeEeeecch
Confidence            999999999843   47999999985

>KOG0196|consensus

Probab=99.62  E-value=7e-17  Score=134.35  Aligned_cols=97  Identities=19%  Similarity=0.301  Sum_probs=88.0

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ..++-++.||||++|.++...  .+-+.+|+||+++|+|+.+|..+   .+.++..+.-.+++.|+.|++||-+.+.|||
T Consensus       681 AsIMGQFdHPNIIrLEGVVTk--s~PvMIiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm~YVHR  755 (996)
T KOG0196|consen  681 ASIMGQFDHPNIIRLEGVVTK--SKPVMIITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDMNYVHR  755 (996)
T ss_pred             hhhcccCCCCcEEEEEEEEec--CceeEEEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhcCchhh
Confidence            367779999999999999876  45678999999999999999753   3569999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||-..||||+++-++|++|||+
T Consensus       756 DLAARNILVNsnLvCKVsDFGL  777 (996)
T KOG0196|consen  756 DLAARNILVNSNLVCKVSDFGL  777 (996)
T ss_pred             hhhhhheeeccceEEEeccccc
Confidence            9999999999999999999985

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=5.3e-17  Score=118.39  Aligned_cols=84  Identities=18%  Similarity=0.102  Sum_probs=64.6

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+. ++++.++++.      +..+++|||+.|.+|.+.+..          . ...++.|+++++.++|++||+||
T Consensus        53 ~iL~~L~~~~~vP~ll~~------~~~~lvmeyI~G~~L~~~~~~----------~-~~~~~~qi~~~L~~lH~~GIvHr  115 (218)
T PRK12274         53 LALRQLDGLPRTPRLLHW------DGRHLDRSYLAGAAMYQRPPR----------G-DLAYFRAARRLLQQLHRCGVAHN  115 (218)
T ss_pred             HHHHhcCCCCCCCEEEEE------cCEEEEEeeecCccHHhhhhh----------h-hHHHHHHHHHHHHHHHHCcCccC
Confidence            3444553 3566666553      235899999999888654311          1 13578899999999999999999


Q ss_pred             cc-chhhhhhhccceeecccccC
Q psy18117        194 GE-RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Di-kp~Nil~~~~~~~ki~D~~~  215 (215)
                      || ||+|||++.+|.++|+|||.
T Consensus       116 DL~kp~NILv~~~g~i~LIDFG~  138 (218)
T PRK12274        116 DLAKEANWLVQEDGSPAVIDFQL  138 (218)
T ss_pred             CCCCcceEEEcCCCCEEEEECCC
Confidence            99 79999999999999999984

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.60  E-value=2.7e-16  Score=129.82  Aligned_cols=78  Identities=17%  Similarity=0.153  Sum_probs=65.6

Q ss_pred             hHHHHHHhhhcCCChHHHHHHHHH--------------------hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        138 QELFLVLELADQGDLALVIAECRQ--------------------KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       138 ~~~~lv~e~~~~g~L~~~i~~~~~--------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...++|+||+++|+|.+++.....                    ....+++..++.++.|+++||.|+|+++|+||||||
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp  337 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP  337 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence            457899999999999999864210                    011245677899999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||++.++.+||+|||.
T Consensus       338 ~NILl~~~~~~kL~DFGl  355 (507)
T PLN03224        338 ENLLVTVDGQVKIIDFGA  355 (507)
T ss_pred             HhEEECCCCcEEEEeCcC
Confidence            999999999999999974

>KOG0576|consensus

Probab=99.59  E-value=1e-16  Score=131.29  Aligned_cols=94  Identities=19%  Similarity=0.282  Sum_probs=86.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+..+||||+.+++.+..  ...+++.||||.+|+|.+.-..    .++++|.++....+..+.|+.|+|++|=+|||
T Consensus        64 ~~~~dc~h~nivay~gsylr--~dklwicMEycgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~gk~hRd  137 (829)
T KOG0576|consen   64 GMLRDCRHPNIVAYFGSYLR--RDKLWICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQGKIHRD  137 (829)
T ss_pred             eeeecCCCcChHHHHhhhhh--hcCcEEEEEecCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcCCccccc
Confidence            67788999999999999987  5689999999999999998643    34799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||=+|||+++.|.+|++|||
T Consensus       138 iKGanilltd~gDvklaDfg  157 (829)
T KOG0576|consen  138 IKGANILLTDEGDVKLADFG  157 (829)
T ss_pred             ccccceeecccCceeecccC
Confidence            99999999999999999998

>KOG1025|consensus

Probab=99.59  E-value=1.2e-15  Score=127.86  Aligned_cols=95  Identities=21%  Similarity=0.272  Sum_probs=86.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++|||+++|++++..+   .+-||++|++.|.|.++++..   |..+.......|..||++|+.|||.++++|||
T Consensus       750 l~masldHpnl~RLLgvc~~s---~~qlvtq~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrd  823 (1177)
T KOG1025|consen  750 LRMASLDHPNLLRLLGVCMLS---TLQLVTQLMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRD  823 (1177)
T ss_pred             HHHhcCCCchHHHHhhhcccc---hHHHHHHhcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhcchhhhh
Confidence            456689999999999999763   499999999999999999774   44688999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |-..||||.+...+||+|||.
T Consensus       824 LaaRNVLVksP~hvkitdfgl  844 (1177)
T KOG1025|consen  824 LAARNVLVKSPNHVKITDFGL  844 (1177)
T ss_pred             hhhhheeecCCCeEEEEecch
Confidence            999999999999999999984

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.57  E-value=3.6e-16  Score=139.93  Aligned_cols=88  Identities=23%  Similarity=0.235  Sum_probs=77.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH---hCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH---SRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~  191 (215)
                      ...+.++||||+++++++..  .+..++||||+++|+|.+++..       +++..+..++.|+++|++|+|   +.+|+
T Consensus       735 ~~l~~l~HpnIv~~~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~ii  805 (968)
T PLN00113        735 ADMGKLQHPNIVKLIGLCRS--EKGAYLIHEYIEGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVV  805 (968)
T ss_pred             HHHhhCCCCCcceEEEEEEc--CCCCEEEEeCCCCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence            45667899999999999976  4578999999999999999843       788999999999999999999   67999


Q ss_pred             ccccchhhhhhhccceeecc
Q psy18117        192 HRGERETFLSVLGDCVRTVS  211 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~  211 (215)
                      ||||||+||+++.++..+++
T Consensus       806 H~dlkp~Nil~~~~~~~~~~  825 (968)
T PLN00113        806 VGNLSPEKIIIDGKDEPHLR  825 (968)
T ss_pred             cCCCCHHhEEECCCCceEEE
Confidence            99999999999988866653

>KOG3653|consensus

Probab=99.56  E-value=1.4e-15  Score=120.38  Aligned_cols=96  Identities=21%  Similarity=0.239  Sum_probs=83.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCc--hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-----  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-----  187 (215)
                      ..+..++|+||++++..-..-+  ..+.+||+||.+.|+|.++|..+     .+++....+++.-+++||+|||+     
T Consensus       256 y~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-----tisw~~~cria~SmarGLa~LHee~p~~  330 (534)
T KOG3653|consen  256 YSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-----TISWNSLCRIAESMARGLAHLHEELPRG  330 (534)
T ss_pred             HhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-----cccHHHHHHHHHHHHHHHHHhcccCCcC
Confidence            4456889999999987755422  23688999999999999999753     48999999999999999999995     


Q ss_pred             ----CCccccccchhhhhhhccceeecccccC
Q psy18117        188 ----RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ----~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                          ..|+|||||..||||.+|+..-|+|||+
T Consensus       331 d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  331 DHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             CCCCCccccccccccceEEccCCcEEeeccce
Confidence                3799999999999999999999999985

>KOG0596|consensus

Probab=99.55  E-value=6.5e-16  Score=124.34  Aligned_cols=91  Identities=18%  Similarity=0.248  Sum_probs=77.7

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      +.-.|.+||+|+++-..  ++.+|+||||-+. ||..+|+...   ...+.-..+.|..|++.|+.++|..||||-||||
T Consensus       415 KLkg~~~IIqL~DYEv~--d~~lYmvmE~Gd~-DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKP  488 (677)
T KOG0596|consen  415 KLKGHDKIIQLYDYEVT--DGYLYMVMECGDI-DLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKP  488 (677)
T ss_pred             HhcCCceEEEEeeeecc--CceEEEEeecccc-cHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCc
Confidence            34458999999998765  6789999999998 9999997632   2344458899999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|.|+ -.|.+||+|||.
T Consensus       489 ANFLl-VkG~LKLIDFGI  505 (677)
T KOG0596|consen  489 ANFLL-VKGRLKLIDFGI  505 (677)
T ss_pred             ccEEE-EeeeEEeeeech
Confidence            99987 678999999984

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.55  E-value=1.2e-15  Score=114.89  Aligned_cols=94  Identities=34%  Similarity=0.462  Sum_probs=82.9

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ..+.++|++++++.+.+..  ....++++||+++++|..++....    .+++..+..++.|+++++.|||+.+++|+||
T Consensus        40 ~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i  113 (244)
T smart00220       40 ILKKLKHPNIVRLYDVFED--EDKLYLVMEYCDGGDLFDLLKKRG----RLSEDEARFYARQILSALEYLHSNGIIHRDL  113 (244)
T ss_pred             HHHhCCCCcHHHHHhheee--CCEEEEEEeCCCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence            3445589999999998865  467899999999999999986522    3889999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|.||+++.++.++|+||+.
T Consensus       114 ~~~ni~~~~~~~~~l~d~~~  133 (244)
T smart00220      114 KPENILLDEDGHVKLADFGL  133 (244)
T ss_pred             CHHHeEECCCCcEEEccccc
Confidence            99999999999999999973

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.53  E-value=6.9e-16  Score=114.66  Aligned_cols=86  Identities=9%  Similarity=0.180  Sum_probs=67.7

Q ss_pred             CCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        116 SDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      ....+.|+++....+.+....      ....+++|||++|.+|.++..        +++    ....+++.++..+|++|
T Consensus        88 ~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g  155 (232)
T PRK10359         88 QTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG  155 (232)
T ss_pred             HHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC
Confidence            345567888887776655321      135788999999999987631        333    24569999999999999


Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      ++|||+||+||+++.+| ++|+|||
T Consensus       156 i~H~Dikp~Nili~~~g-i~liDfg  179 (232)
T PRK10359        156 MVSGDPHKGNFIVSKNG-LRIIDLS  179 (232)
T ss_pred             CccCCCChHHEEEeCCC-EEEEECC
Confidence            99999999999999999 9999997

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.51  E-value=1.7e-15  Score=127.34  Aligned_cols=86  Identities=14%  Similarity=0.032  Sum_probs=69.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|++++.....+..  ....++||||+++++|.+++.            ....++.|+++++.+||++|++|||
T Consensus       388 ~~l~~l~~~~i~~p~~~~~~--~~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~giiHrD  453 (535)
T PRK09605        388 RLLSEARRAGVPTPVIYDVD--PEEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAGIVHGD  453 (535)
T ss_pred             HHHHhhcccCCCeeEEEEEe--CCCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCCCccCC
Confidence            44566778887665444333  345789999999999998874            2357889999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+|||+ .++.++|+|||.
T Consensus       454 lkp~NILl-~~~~~~liDFGl  473 (535)
T PRK09605        454 LTTSNFIV-RDDRLYLIDFGL  473 (535)
T ss_pred             CChHHEEE-ECCcEEEEeCcc
Confidence            99999999 678999999984

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.51  E-value=4.6e-15  Score=110.69  Aligned_cols=93  Identities=33%  Similarity=0.455  Sum_probs=81.4

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      ...++|++++++++.+..  ....++++|++++++|.+++.....   .+++..+..++.|++.++.++|+++++|+|++
T Consensus        51 ~~~~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~  125 (225)
T smart00221       51 LKKLKHPNIVKLYGVFED--PEPLYLVMEYCEGGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLHSLGIVHRDLK  125 (225)
T ss_pred             HHhCCCCChhhheeeeec--CCceEEEEeccCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            345578999999988765  4678899999999999999865221   17899999999999999999999999999999


Q ss_pred             hhhhhhhccceeeccccc
Q psy18117        197 ETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~  214 (215)
                      |.||+++.++.++|+||+
T Consensus       126 ~~ni~v~~~~~~~l~d~g  143 (225)
T smart00221      126 PENILLGMDGLVKLADFG  143 (225)
T ss_pred             HHHEEEcCCCCEEEeeCc
Confidence            999999999999999997

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00090 RIO RIO-like kinase

Probab=99.51  E-value=2.7e-15  Score=113.24  Aligned_cols=71  Identities=14%  Similarity=0.143  Sum_probs=60.6

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC-ccccccchhhhhhhccceeecccccC
Q psy18117        140 LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR-ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .++||||+++++|......    +..+.+..+..++.|+++++.+||++| |+||||||+||+++ ++.++|+|||.
T Consensus       123 ~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~  194 (237)
T smart00090      123 NVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQ  194 (237)
T ss_pred             ceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChh
Confidence            4799999999888765422    224566678899999999999999999 99999999999999 88999999983

>KOG1167|consensus

Probab=99.51  E-value=5.2e-15  Score=115.48  Aligned_cols=88  Identities=17%  Similarity=0.218  Sum_probs=76.9

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ...+.||+++...+..  ++.+.+|+||.++-+..++...       ++-..++.|++.++.||.++|++|||||||||+
T Consensus        91 ~gG~~ni~~~~~~~rn--nd~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKps  161 (418)
T KOG1167|consen   91 LGGSDNIIKLNGCFRN--NDQVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPS  161 (418)
T ss_pred             hccchhhhcchhhhcc--CCeeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcc
Confidence            3357899999988865  5789999999999888888754       889999999999999999999999999999999


Q ss_pred             hhhhhcc-ceeecccccC
Q psy18117        199 FLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~-~~~ki~D~~~  215 (215)
                      |+|.+.. +.-.|.|||+
T Consensus       162 NFL~n~~t~rg~LvDFgL  179 (418)
T KOG1167|consen  162 NFLYNRRTQRGVLVDFGL  179 (418)
T ss_pred             ccccccccCCceEEechh
Confidence            9999754 6888899984

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.50  E-value=4.7e-15  Score=109.03  Aligned_cols=95  Identities=28%  Similarity=0.418  Sum_probs=82.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.+.|++++++.+.+..  ....++++|++.+++|.+++....   ..++...++.++.++++++.+||++|++|+|
T Consensus        43 ~~~~~l~~~~i~~~~~~~~~--~~~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d  117 (215)
T cd00180          43 EILKKLNHPNIVKLYGVFED--ENHLYLVMEYCEGGSLKDLLKENE---GKLSEDEILRILLQILEGLEYLHSNGIIHRD  117 (215)
T ss_pred             HHHHhcCCCCeeeEeeeeec--CCeEEEEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            34455667899999888765  357889999999889999986531   3588999999999999999999999999999


Q ss_pred             cchhhhhhhc-cceeeccccc
Q psy18117        195 ERETFLSVLG-DCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~-~~~~ki~D~~  214 (215)
                      |+|.||+++. ++.++|+||+
T Consensus       118 l~~~ni~~~~~~~~~~l~d~~  138 (215)
T cd00180         118 LKPENILLDSDNGKVKLADFG  138 (215)
T ss_pred             CCHhhEEEeCCCCcEEEecCC
Confidence            9999999999 8999999997

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0200|consensus

Probab=99.49  E-value=7.2e-15  Score=124.87  Aligned_cols=95  Identities=25%  Similarity=0.328  Sum_probs=84.3

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH---Hhc---------CCchhHHHHHHHHHHHHHHHHHH
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---QKK---------CHLAECLVWSYFRQIAAALQYVH  186 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~---~~~---------~~~~~~~~~~~~~ql~~~l~~lH  186 (215)
                      ...|+|++.+.+.+..  .+.+++|+|||..|+|..++...+   .-.         ..++..+...+..||+.|++||+
T Consensus       358 ~g~H~niv~llG~~t~--~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~  435 (609)
T KOG0200|consen  358 LGKHPNIVNLLGACTQ--DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA  435 (609)
T ss_pred             hcCCcchhhheeeecc--CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh
Confidence            4469999999999876  578999999999999999997644   000         24888899999999999999999


Q ss_pred             hCCccccccchhhhhhhccceeecccccC
Q psy18117        187 SRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.++||||+-..|||+..+.++||+|||+
T Consensus       436 ~~~~vHRDLAaRNVLi~~~~~~kIaDFGl  464 (609)
T KOG0200|consen  436 SVPCVHRDLAARNVLITKNKVIKIADFGL  464 (609)
T ss_pred             hCCccchhhhhhhEEecCCCEEEEccccc
Confidence            99999999999999999999999999985

>KOG0591|consensus

Probab=99.49  E-value=3.6e-14  Score=105.99  Aligned_cols=67  Identities=61%  Similarity=1.184  Sum_probs=61.1

Q ss_pred             hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCc
Q psy18117         45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGV  113 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~  113 (215)
                      .+++|||+||+||++.+.+|++++|+||+||+++||+..+.||.++  +..+++++|..+.++++|.+.
T Consensus       186 ~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~qgd~~~~p~~~  252 (375)
T KOG0591|consen  186 HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQGDYPPLPDEH  252 (375)
T ss_pred             HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHcCCCCCCcHHH
Confidence            5589999999999999999999999999999999999999999987  667899999999998888443

>KOG2052|consensus

Probab=99.48  E-value=9e-15  Score=115.07  Aligned_cols=96  Identities=21%  Similarity=0.262  Sum_probs=81.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-----  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-----  187 (215)
                      +.-..++|+||..++.+=....+  ..++||++|-+.|+|+++|..     ..++-....+++.-++.||.+||.     
T Consensus       257 YqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GT  331 (513)
T KOG2052|consen  257 YQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGT  331 (513)
T ss_pred             HHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence            33458999999998876433221  258999999999999999965     358999999999999999999994     


Q ss_pred             ---CCccccccchhhhhhhccceeecccccC
Q psy18117        188 ---RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ---~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                         -.|.|||||..||||..+|.+-|+|+|+
T Consensus       332 qgKPaIAHRDlKSKNILVKkn~~C~IADLGL  362 (513)
T KOG2052|consen  332 QGKPAIAHRDLKSKNILVKKNGTCCIADLGL  362 (513)
T ss_pred             CCCchhhccccccccEEEccCCcEEEeecee
Confidence               2699999999999999999999999984

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.47  E-value=7.2e-15  Score=109.25  Aligned_cols=86  Identities=13%  Similarity=0.097  Sum_probs=67.2

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      .+.|+++......+..  ....+++|||++|++|.+++..       ... ....++.+++.++.++|++|++|||+||+
T Consensus        55 ~l~~~~i~~p~~~~~~--~~~~~lv~e~~~G~~L~~~~~~-------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~  124 (211)
T PRK14879         55 RARKAGVNVPAVYFVD--PENFIIVMEYIEGEPLKDLINS-------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTS  124 (211)
T ss_pred             HHHHCCCCCCeEEEEe--CCCCEEEEEEeCCcCHHHHHHh-------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence            3344444333333333  3457889999999999998854       112 78899999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||++ ++.++|+||+.
T Consensus       125 Nil~~-~~~~~liDf~~  140 (211)
T PRK14879        125 NMILS-GGKIYLIDFGL  140 (211)
T ss_pred             cEEEE-CCCEEEEECCc
Confidence            99999 78999999973

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.46  E-value=1.3e-14  Score=109.72  Aligned_cols=66  Identities=15%  Similarity=0.171  Sum_probs=55.8

Q ss_pred             HHHHhhhcC-CChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        141 FLVLELADQ-GDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       141 ~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ++|||++++ .+|.+++..     ..+++.    .+.|++.++.+||++||+||||||+|||++.++.++|+||+.
T Consensus       122 ~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~  188 (239)
T PRK01723        122 DILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR  188 (239)
T ss_pred             eEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence            489999997 689888743     134443    367899999999999999999999999999999999999974

>KOG4158|consensus

Probab=99.44  E-value=1.8e-14  Score=112.38  Aligned_cols=90  Identities=22%  Similarity=0.262  Sum_probs=74.1

Q ss_pred             cCCCcchhhhhhhhcCCc-------------------------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHH
Q psy18117        119 TLHHPNIVELRSAFASRS-------------------------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS  173 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~-------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~  173 (215)
                      .-+|||||++...|.+.-                         +..+|+||.-++. +|..++..+     ..+.....-
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-----~~s~r~~~~  345 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-----HRSYRTGRV  345 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-----CCchHHHHH
Confidence            346999999988886531                         1346788988888 999988542     467778889


Q ss_pred             HHHHHHHHHHHHHhCCccccccchhhhhh--hccc--eeeccccc
Q psy18117        174 YFRQIAAALQYVHSRRILHRGERETFLSV--LGDC--VRTVSEQA  214 (215)
Q Consensus       174 ~~~ql~~~l~~lH~~~i~HrDikp~Nil~--~~~~--~~ki~D~~  214 (215)
                      ++.|+++|+.|||++||.|||+|.+|||+  |.|+  .+.|+|||
T Consensus       346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG  390 (598)
T KOG4158|consen  346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG  390 (598)
T ss_pred             HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence            99999999999999999999999999997  4444  89999998

>KOG0581|consensus

Probab=99.44  E-value=1.4e-13  Score=106.10  Aligned_cols=113  Identities=29%  Similarity=0.432  Sum_probs=77.6

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQ   84 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~   84 (215)
                      +..++|++||..|||||-+.+..|+.++|+||+|..++|+  ..|..+|.++       -....++.+   ++-.++.+.
T Consensus       231 nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~--a~GrfP~~~~-------~~~~~~~~~---Ll~~Iv~~p  298 (364)
T KOG0581|consen  231 NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL--AIGRFPYPPP-------NPPYLDIFE---LLCAIVDEP  298 (364)
T ss_pred             hhhcccccccccccChhhhcCCcCCcccceecccHHHHHH--hhCCCCCCCc-------CCCCCCHHH---HHHHHhcCC
Confidence            3467899999999999999999999999999999999999  5787777655       111223322   344455555


Q ss_pred             CCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117         85 SPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus        85 ~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      .|-.....--.+ .+.+...+..+.|.++....+.+.||+|.+...
T Consensus       299 pP~lP~~~fS~e-f~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  299 PPRLPEGEFSPE-FRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             CCCCCcccCCHH-HHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence            554443312223 344445556677888888889999999987543

>KOG0670|consensus

Probab=99.41  E-value=6e-14  Score=112.65  Aligned_cols=88  Identities=20%  Similarity=0.201  Sum_probs=77.9

Q ss_pred             cchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhh
Q psy18117        123 PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSV  202 (215)
Q Consensus       123 ~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~  202 (215)
                      -+++.|+..|.-  .+++|+|+|-..- +|.++|+..+. +..|....+..|+.||..||..|-..||+|.||||.||||
T Consensus       494 ~Hclrl~r~F~h--knHLClVFE~Lsl-NLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLV  569 (752)
T KOG0670|consen  494 FHCLRLFRHFKH--KNHLCLVFEPLSL-NLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILV  569 (752)
T ss_pred             hHHHHHHHHhhh--cceeEEEehhhhc-hHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEe
Confidence            467888888765  5789999999887 99999988764 4568889999999999999999999999999999999999


Q ss_pred             hccc-eeeccccc
Q psy18117        203 LGDC-VRTVSEQA  214 (215)
Q Consensus       203 ~~~~-~~ki~D~~  214 (215)
                      ++.. .+||||||
T Consensus       570 NE~k~iLKLCDfG  582 (752)
T KOG0670|consen  570 NESKNILKLCDFG  582 (752)
T ss_pred             ccCcceeeeccCc
Confidence            8775 89999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.41  E-value=4.1e-14  Score=104.27  Aligned_cols=67  Identities=16%  Similarity=0.018  Sum_probs=57.9

Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        139 ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ..+++|||+++++|..+..          ......++.+++.++.++|+.||+||||||+||+++.++.++|+|||.
T Consensus       105 ~~~lv~e~~~g~~L~~~~~----------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~  171 (198)
T cd05144         105 RHAVVMEYIDGVELYRVRV----------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQ  171 (198)
T ss_pred             CceEEEEEeCCcchhhccc----------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCc
Confidence            4578999999998876532          134567889999999999999999999999999999999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.41  E-value=1.5e-14  Score=106.61  Aligned_cols=66  Identities=20%  Similarity=0.169  Sum_probs=57.3

Q ss_pred             hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        138 QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       138 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ...+++|||++|++|.+++....     .      .++.|++.+|.++|+.|++|||+||.||+++ ++.++++||+.
T Consensus        70 ~~~~lv~e~~~g~~l~~~~~~~~-----~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~  135 (199)
T TIGR03724        70 DNKTIVMEYIEGKPLKDVIEEGN-----D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGL  135 (199)
T ss_pred             CCCEEEEEEECCccHHHHHhhcH-----H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCC
Confidence            35679999999999998874311     1      7899999999999999999999999999999 88999999973

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.37  E-value=1.3e-13  Score=107.84  Aligned_cols=96  Identities=31%  Similarity=0.434  Sum_probs=79.4

Q ss_pred             CccCCCc-chhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTLHHP-NIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l~h~-~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ...+.|+ +++.+.+.+..  ....+++++++.++++.+++...... ..+.+.....++.|++.++.|+|+++++|||+
T Consensus        51 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~  127 (384)
T COG0515          51 LASLNHPPNIVKLYDFFQD--EGSLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKGIIHRDI  127 (384)
T ss_pred             HHHccCCcceeeEEEEEec--CCEEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence            4455555 68888888844  33478999999999999776542211 25899999999999999999999999999999


Q ss_pred             chhhhhhhccc-eeecccccC
Q psy18117        196 RETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||+||+++..+ .+|++|||.
T Consensus       128 kp~nil~~~~~~~~~l~dfg~  148 (384)
T COG0515         128 KPENILLDRDGRVVKLIDFGL  148 (384)
T ss_pred             CHHHeeecCCCCeEEEeccCc
Confidence            99999999998 799999984

>KOG0578|consensus

Probab=99.35  E-value=7.3e-13  Score=107.08  Aligned_cols=43  Identities=40%  Similarity=0.837  Sum_probs=23.9

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      |.+|||+|||||++....|+.+.|+||+|+...||  .-|-|+|.
T Consensus       428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM--veGEPPYl  470 (550)
T KOG0578|consen  428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM--VEGEPPYL  470 (550)
T ss_pred             cccCCCCccchhhhhhcccCccccchhhhhHHHHH--hcCCCCcc
Confidence            45555555555555555555555555555555555  44555554

>KOG1290|consensus

Probab=99.35  E-value=2e-13  Score=108.74  Aligned_cols=81  Identities=22%  Similarity=0.331  Sum_probs=68.9

Q ss_pred             Ccchhhhhhhhc--CCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccchh
Q psy18117        122 HPNIVELRSAFA--SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERET  198 (215)
Q Consensus       122 h~~iv~l~~~~~--~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp~  198 (215)
                      -..||+|++.|.  .+++.++++|+|+... +|..+|....-+  .++...++.|.+|++.||.|||. .||||-||||+
T Consensus       141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd-nLLklI~~s~Yr--Glpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPE  217 (590)
T KOG1290|consen  141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGD-NLLKLIKYSNYR--GLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPE  217 (590)
T ss_pred             CceeeeeeccceecCCCCcEEEEEehhhhh-HHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcc
Confidence            356888888885  4456789999999987 999999875433  48999999999999999999995 69999999999


Q ss_pred             hhhhhcc
Q psy18117        199 FLSVLGD  205 (215)
Q Consensus       199 Nil~~~~  205 (215)
                      |||+..+
T Consensus       218 NvLl~~~  224 (590)
T KOG1290|consen  218 NVLLCST  224 (590)
T ss_pred             eeeeecc
Confidence            9998655

>KOG0033|consensus

Probab=99.34  E-value=1.3e-12  Score=96.10  Aligned_cols=100  Identities=33%  Similarity=0.620  Sum_probs=71.1

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC------hHHHhhCCCCCCccchhhHHHHHH
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS------PERLKELKYSFPSDVWSLGCVLYE   79 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~------pe~~~~~~~~~~~diws~g~~l~e   79 (215)
                      ....++.|||.|||||++....|+.++|+||+|+.++.+  +.|.++|-.      -|.+..+.|+.++.-|+.      
T Consensus       167 ~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiL--L~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~------  238 (355)
T KOG0033|consen  167 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDT------  238 (355)
T ss_pred             cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHH--HhCCCCCCCccHHHHHHHHhccccCCCCcccCc------
Confidence            345689999999999999999999999999999999988  677776643      245555666666655531      


Q ss_pred             HHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         80 MVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        80 ~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                                    ...-++.+....+.-.|..++.....++||+|.+
T Consensus       239 --------------is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  239 --------------VTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             --------------CCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence                          1122233333333455777778889999999875

>KOG0201|consensus

Probab=99.32  E-value=3.1e-13  Score=106.29  Aligned_cols=98  Identities=28%  Similarity=0.446  Sum_probs=67.7

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC--hHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS--PERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~--pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      +||+|||+|||||++++.+|+.++|+||+|+..+|+  ..|.|+|..  |...                 ++.+-...+|
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl--a~GePP~s~~hPmrv-----------------lflIpk~~PP  229 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL--AKGEPPHSKLHPMRV-----------------LFLIPKSAPP  229 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHH--hcCCCCCcccCcceE-----------------EEeccCCCCC
Confidence            799999999999999988999999999999999999  578988852  3221                 1111111223


Q ss_pred             ccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ...+.  ...-.+.+...++...|..+..+...++|++|.+
T Consensus       230 ~L~~~--~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  230 RLDGD--FSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ccccc--cCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            22221  1223455555566677777877888888888776

>KOG1164|consensus

Probab=99.32  E-value=5e-13  Score=105.67  Aligned_cols=88  Identities=16%  Similarity=0.078  Sum_probs=71.5

Q ss_pred             chhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhh
Q psy18117        124 NIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVL  203 (215)
Q Consensus       124 ~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~  203 (215)
                      ++..+.+... .....-++||+.+.. +|.++....+  ...++...+..++.|++.+|+++|+.|++||||||+|+++.
T Consensus        81 ~~~~~~~~G~-~~~~~~~iVM~l~G~-sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g  156 (322)
T KOG1164|consen   81 HFPKLLDHGR-STEDFNFIVMSLLGP-SLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVG  156 (322)
T ss_pred             CCCEEEEecc-CCCceeEEEEeccCc-cHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeec
Confidence            4555555542 124567889999877 9999876544  34699999999999999999999999999999999999997


Q ss_pred             cc-----ceeecccccC
Q psy18117        204 GD-----CVRTVSEQAK  215 (215)
Q Consensus       204 ~~-----~~~ki~D~~~  215 (215)
                      ..     ..+.|.|||+
T Consensus       157 ~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen  157 QSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             CCCCcccceEEEEecCC
Confidence            54     4799999985

>KOG0598|consensus

Probab=99.30  E-value=1.3e-12  Score=100.84  Aligned_cols=52  Identities=38%  Similarity=0.723  Sum_probs=46.4

Q ss_pred             ccccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChH
Q psy18117          4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE   57 (215)
Q Consensus         4 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe   57 (215)
                      .++.++|+|||+.|||||++.+.+|+.++||||+|+++++|  +.|-|+|.++.
T Consensus       178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM--L~G~pPF~~~~  229 (357)
T KOG0598|consen  178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM--LTGKPPFYAED  229 (357)
T ss_pred             CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH--hhCCCCCcCcc
Confidence            45678899999999999999999999999999999999999  67888887653

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.29  E-value=5.8e-13  Score=97.13  Aligned_cols=69  Identities=16%  Similarity=0.130  Sum_probs=55.7

Q ss_pred             HHHHHhhhcCCChHH-HHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccchhhhhhhccceeecccccC
Q psy18117        140 LFLVLELADQGDLAL-VIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~-~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .+++|||++++++.. .+....     . ...+..++.|++.++.++|+ ++|+||||||+||+++ ++.++|+|||.
T Consensus        90 ~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~  160 (187)
T cd05119          90 HVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQ  160 (187)
T ss_pred             CEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcc
Confidence            478999999865432 222211     1 16788999999999999999 9999999999999999 89999999983

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1163|consensus

Probab=99.29  E-value=2.8e-12  Score=94.17  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=64.3

Q ss_pred             hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhcc---ceeeccccc
Q psy18117        138 QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGD---CVRTVSEQA  214 (215)
Q Consensus       138 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~---~~~ki~D~~  214 (215)
                      ..-.+||+.... +|.++.+.|..   .++...+..++.|++.-++|+|.++.|||||||+|.|..-+   ..+-++|||
T Consensus        84 ~ynvlVMdLLGP-sLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG  159 (341)
T KOG1163|consen   84 DYNVLVMDLLGP-SLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG  159 (341)
T ss_pred             ccceeeeeccCc-cHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence            445689999876 99999888765   49999999999999999999999999999999999997533   389999998


Q ss_pred             C
Q psy18117        215 K  215 (215)
Q Consensus       215 ~  215 (215)
                      +
T Consensus       160 L  160 (341)
T KOG1163|consen  160 L  160 (341)
T ss_pred             c
Confidence            4

>KOG0616|consensus

Probab=99.25  E-value=1.1e-11  Score=93.41  Aligned_cols=47  Identities=32%  Similarity=0.696  Sum_probs=43.0

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      .|.|.||||.|+|||.+...+|++++||||+|++.+||  ..|.|+|.+
T Consensus       197 rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM--laG~pPF~~  243 (355)
T KOG0616|consen  197 RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM--LAGYPPFYD  243 (355)
T ss_pred             cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH--HcCCCCCcC
Confidence            38899999999999999999999999999999999999  678877754

>KOG1240|consensus

Probab=99.23  E-value=6.5e-12  Score=108.82  Aligned_cols=90  Identities=13%  Similarity=0.097  Sum_probs=80.2

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...++||+..+..+...  +..-|+|=+|..+ +|++.|..++    -+...+-+.|+.||+.|+.-||..||+|+|||.
T Consensus        76 ~l~~~pn~lPfqk~~~t--~kAAylvRqyvkh-nLyDRlSTRP----FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKs  148 (1431)
T KOG1240|consen   76 ALMKAPNCLPFQKVLVT--DKAAYLVRQYVKH-NLYDRLSTRP----FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKS  148 (1431)
T ss_pred             HhhcCCcccchHHHHHh--hHHHHHHHHHHhh-hhhhhhccch----HHHHHHHHHHHHHHHHHHHHHHHcCcccccccc
Confidence            45678999888877655  5678999999999 9999997755    478888889999999999999999999999999


Q ss_pred             hhhhhhccceeeccccc
Q psy18117        198 TFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~  214 (215)
                      +||||++-+=+.|+|||
T Consensus       149 ENILiTSWNW~~LtDFA  165 (1431)
T KOG1240|consen  149 ENILITSWNWLYLTDFA  165 (1431)
T ss_pred             ceEEEeeechhhhhccc
Confidence            99999999999999998

>KOG0577|consensus

Probab=99.23  E-value=2e-11  Score=99.94  Aligned_cols=104  Identities=25%  Similarity=0.460  Sum_probs=66.0

Q ss_pred             ccccccccCccccccccccc---CCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh
Q psy18117          6 SSVDSFLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA   82 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~---~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~   82 (215)
                      ..+++|+|||+|||||++..   +.|+.+.||||+|+.|.|+.. +. |++...+..               --+|-++-
T Consensus       177 ~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE-Rk-PPlFnMNAM---------------SALYHIAQ  239 (948)
T KOG0577|consen  177 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RK-PPLFNMNAM---------------SALYHIAQ  239 (948)
T ss_pred             CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhh-cC-CCccCchHH---------------HHHHHHHh
Confidence            34678999999999999864   458889999999999988864 22 232221111               02344444


Q ss_pred             cCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         83 LQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        83 g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ...|..... .+......+...++.++|.++......++|++|.+
T Consensus       240 NesPtLqs~-eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  240 NESPTLQSN-EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR  283 (948)
T ss_pred             cCCCCCCCc-hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence            444443322 33344455555556677777777788888988765

>KOG0615|consensus

Probab=99.22  E-value=2.8e-12  Score=100.37  Aligned_cols=100  Identities=28%  Similarity=0.509  Sum_probs=66.9

Q ss_pred             cccccccccCcccccccccccCCCC---cccchhhhhHHHHHhhcccCCCCCCC----h---HHHhhCCCCCCccchhhH
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYS---FPSDVWSLGCVLYEVDSFLGTPYYMS----P---ERLKELKYSFPSDVWSLG   74 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~---~~~~~~s~g~~~~e~~~~~gt~~y~~----p---e~~~~~~~~~~~diws~g   74 (215)
                      ..-++|+||||.|.|||++...++.   .+.|+||+||.++-.  +.|+|+|..    |   |.+..++|.+-.-.|.  
T Consensus       332 ~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc--LsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~--  407 (475)
T KOG0615|consen  332 GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC--LSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD--  407 (475)
T ss_pred             ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE--eccCCCcccccCCccHHHHHhcCcccccChhhh--
Confidence            4456899999999999999877644   466999999999876  789988742    2   3333333333222221  


Q ss_pred             HHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         75 CVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                                        ...+-...+....+...|.++..+.+.++||++-
T Consensus       408 ------------------~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  408 ------------------RISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             ------------------hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence                              1222233334444456688888899999999875

>KOG0597|consensus

Probab=99.20  E-value=1.6e-11  Score=99.83  Aligned_cols=83  Identities=39%  Similarity=0.639  Sum_probs=45.0

Q ss_pred             hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHH------------------hhcC
Q psy18117         45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE------------------MALF  106 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~------------------~~~~  106 (215)
                      .+..|||.||+||.+.+..|+..+|.||+||++||+..|++||+...  ..++.+.|.                  .+..
T Consensus       158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--i~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL  235 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--ITQLVKSILKDPVKPPSTASSSFVNFLQGLL  235 (808)
T ss_pred             eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--HHHHHHHHhcCCCCCcccccHHHHHHHHHHh
Confidence            34556666666666555555555666666666666666665555442  223333332                  2233


Q ss_pred             CCCCCCcccCCccCCCcchhhhh
Q psy18117        107 PPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      .+.|..++...+.+.||++..-.
T Consensus       236 ~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  236 IKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             hcChhhcccHHHHhcChHHhhhh
Confidence            34455566666777788766543

>KOG0671|consensus

Probab=99.19  E-value=3.4e-12  Score=98.94  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             hhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhc
Q psy18117        125 IVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLG  204 (215)
Q Consensus       125 iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~  204 (215)
                      ++.+.++|.=  .+.+++|+|.+.. ++.++|..  .+-.+++-..++.+..||++++.|||+.+++|-||||+|||+.+
T Consensus       153 cv~m~~wFdy--rghiCivfellG~-S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvs  227 (415)
T KOG0671|consen  153 CVQMRDWFDY--RGHICIVFELLGL-STFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVS  227 (415)
T ss_pred             EEeeehhhhc--cCceEEEEeccCh-hHHHHhcc--CCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEec
Confidence            5566666643  4688999999876 99999976  33457999999999999999999999999999999999999843

>KOG0579|consensus

Probab=99.15  E-value=4.7e-11  Score=98.57  Aligned_cols=100  Identities=29%  Similarity=0.500  Sum_probs=64.9

Q ss_pred             cccccCccccccccc-----ccCCCCcccchhhhhHHHHHhhcccCCCCCC--ChHHHhhCCCCCCccchhhHHHHHHHH
Q psy18117          9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYM--SPERLKELKYSFPSDVWSLGCVLYEMV   81 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~-----~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~--~pe~~~~~~~~~~~diws~g~~l~e~~   81 (215)
                      ++|+|||||||||++     ++..|.+++|+||+|+.+.||..  +-|+-.  .|-+                 ++..+.
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq--iEPPHhelnpMR-----------------VllKia  248 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ--IEPPHHELNPMR-----------------VLLKIA  248 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc--cCCCccccchHH-----------------HHHHHh
Confidence            589999999999996     45679999999999999999954  444321  2211                 344444


Q ss_pred             hcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         82 ALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        82 ~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ...+|.......+..-.+.+...++...|..+......+.||++..
T Consensus       249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            4445543332223333344444445556666767778889998763

>KOG1166|consensus

Probab=99.13  E-value=1.8e-11  Score=106.54  Aligned_cols=85  Identities=19%  Similarity=0.161  Sum_probs=69.9

Q ss_pred             chhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhh
Q psy18117        124 NIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVL  203 (215)
Q Consensus       124 ~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~  203 (215)
                      .|..+...+.-  .+...+|+||.+.|+|.++++.    ...+++..+..+..|++.-++.||..+|||.||||+|.|+.
T Consensus       755 ~~~~~~~a~~~--~~~S~lv~ey~~~Gtlld~~N~----~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~  828 (974)
T KOG1166|consen  755 SIMHISSAHVF--QNASVLVSEYSPYGTLLDLINT----NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLR  828 (974)
T ss_pred             chHHHHHHHcc--CCcceeeeeccccccHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEee
Confidence            34444444433  3467899999999999999973    23599999999999999999999999999999999999984


Q ss_pred             c-------cceeeccccc
Q psy18117        204 G-------DCVRTVSEQA  214 (215)
Q Consensus       204 ~-------~~~~ki~D~~  214 (215)
                      .       .-.++|+|||
T Consensus       829 ~~~~~~~~~~~l~lIDfG  846 (974)
T KOG1166|consen  829 REICADSDSKGLYLIDFG  846 (974)
T ss_pred             cccCCCCcccceEEEecc
Confidence            2       2379999998

>KOG0603|consensus

Probab=99.13  E-value=1.7e-11  Score=100.61  Aligned_cols=93  Identities=24%  Similarity=0.303  Sum_probs=82.6

Q ss_pred             CCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      +....+ ||.++++.-.+..  +.+++++++|..+|+|...+..    ...+.+.....+...++-|++++|+.+|+|||
T Consensus        49 il~~~~~~~f~v~lhyafqt--~~kl~l~ld~~rgg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l~iiyrd  122 (612)
T KOG0603|consen   49 ILAFVHNTPFLVKLHYAFQT--DGKLYLILDFLRGGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKLGIAYRD  122 (612)
T ss_pred             HHhhccCCCceeeeeeeecc--ccchhHhhhhcccchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchhHHHHhc
Confidence            334444 8999999988876  5789999999999999988744    44688999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      +|++||+++.+|++|+.||+
T Consensus       123 ~k~enilld~~Ghi~~tdfg  142 (612)
T KOG0603|consen  123 YKLENVLLLLEGHIKLTDFG  142 (612)
T ss_pred             ccccceeecccCccccCCch
Confidence            99999999999999999997

>KOG0694|consensus

Probab=99.13  E-value=9.6e-11  Score=97.05  Aligned_cols=48  Identities=35%  Similarity=0.742  Sum_probs=44.7

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ...|.||||||.|||||++.+..|+...||||+|+++|||  +.|.++|-
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM--L~Gq~PF~  569 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM--LVGESPFP  569 (694)
T ss_pred             CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHH--HcCCCCCC
Confidence            3578999999999999999999999999999999999999  78988886

>KOG1165|consensus

Probab=99.13  E-value=6.7e-11  Score=90.69  Aligned_cols=78  Identities=17%  Similarity=0.252  Sum_probs=68.3

Q ss_pred             CCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccc-----ee
Q psy18117        134 SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC-----VR  208 (215)
Q Consensus       134 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~-----~~  208 (215)
                      .+.+..-.+|+|+... +|.++...|+.   .++...+..++.|++.-++|+|++..|.|||||+|.||...+     ++
T Consensus        93 GqeG~~NiLVidLLGP-SLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~I  168 (449)
T KOG1165|consen   93 GQEGKYNILVIDLLGP-SLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVI  168 (449)
T ss_pred             ccccchhhhhhhhhCc-CHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceE
Confidence            3445667899999977 99999888765   499999999999999999999999999999999999997554     78


Q ss_pred             ecccccC
Q psy18117        209 TVSEQAK  215 (215)
Q Consensus       209 ki~D~~~  215 (215)
                      -|+|||+
T Consensus       169 hiiDFGm  175 (449)
T KOG1165|consen  169 HIIDFGM  175 (449)
T ss_pred             EEEeccc
Confidence            9999985

>KOG0575|consensus

Probab=99.10  E-value=6.7e-11  Score=96.69  Aligned_cols=66  Identities=36%  Similarity=0.742  Sum_probs=43.8

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCCh------HHHhhCCCCCCccchhhHH
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSFPSDVWSLGC   75 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~p------e~~~~~~~~~~~diws~g~   75 (215)
                      -.|+||||.|+|||++...+++.-+|+||+||.+|.+  +.|.|+|..-      ..+....|..++++..-+.
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtL--L~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~  246 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTL--LVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAK  246 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhh--hhCCCCcccchHHHHHHHHHhcCcccccccCHHHH
Confidence            3577777777777777777777777777777777777  6777777654      2233455655555544333

>KOG0576|consensus

Probab=99.10  E-value=6.2e-11  Score=98.00  Aligned_cols=193  Identities=19%  Similarity=0.256  Sum_probs=109.9

Q ss_pred             cccccCcccccccccc---cCCCCcccchhhhhHHHHHhhcccCCCCCCChHHH----hhCCCCCC----ccchh-hHHH
Q psy18117          9 DSFLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL----KELKYSFP----SDVWS-LGCV   76 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~---~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~----~~~~~~~~----~diws-~g~~   76 (215)
                      ++|+|||+|||||+-.   ..+|+..+|+|+.|+...|+.-+-+..+-.-|-+.    ....|..+    .+-|+ +---
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~  249 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHN  249 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence            5799999999999964   36799999999999888887554443332223221    12223222    23344 2112


Q ss_pred             HHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcc-hhhhhhhhcCCchhHHHHHHhhhcCC-ChHH
Q psy18117         77 LYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPN-IVELRSAFASRSGQELFLVLELADQG-DLAL  154 (215)
Q Consensus        77 l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~-iv~l~~~~~~~~~~~~~lv~e~~~~g-~L~~  154 (215)
                      +.....++.|-... ...+.+...+....  ......+.++++.+||| .+..++.+..  +....++++++.+| +...
T Consensus       250 fvK~altknpKkRp-taeklL~h~fvs~~--l~~rl~~eLLdK~n~P~~~v~~~~d~~~--E~~~~i~~~i~s~~rs~~~  324 (829)
T KOG0576|consen  250 FVKGALTKNPKKRP-TAEKLLQHPFVSQT--LSRRLAIELLDKVNNPNPVVRYLEDYDG--EDYLWIPMRICSTGRSSAL  324 (829)
T ss_pred             HHHHHhcCCCccCC-Chhhheeceeeccc--hhhHHHHHHHHHccCCCCcccccccCCc--ccccchhhhhhcCCccccc
Confidence            22233333332110 01111111111110  01111125567788888 4444443332  34678899999987 3333


Q ss_pred             HHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeeccccc
Q psy18117        155 VIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       155 ~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      .+..   ....+.+.+.....+.-+++++++|+--=+|||    |||..+ +..|..|||
T Consensus       325 ~~~~---se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~  376 (829)
T KOG0576|consen  325 EMTV---SEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFA  376 (829)
T ss_pred             cCCh---hhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-ccccccccc
Confidence            3211   112466777888888888999999998889999    887755 677777776

>KOG0605|consensus

Probab=99.09  E-value=4.7e-11  Score=96.29  Aligned_cols=46  Identities=43%  Similarity=0.832  Sum_probs=42.3

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      +.+.+|||.|||||++.+.+|+..+||||+||.++|+  ++|.|+|.+
T Consensus       345 a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm--LvGyPPF~s  390 (550)
T KOG0605|consen  345 AYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM--LVGYPPFCS  390 (550)
T ss_pred             hhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH--HhCCCCCCC
Confidence            4678999999999999999999999999999999999  789998865

>KOG0589|consensus

Probab=99.07  E-value=1.7e-10  Score=92.37  Aligned_cols=45  Identities=47%  Similarity=0.945  Sum_probs=40.1

Q ss_pred             ccccccccccCcccccccccccCCCCcccchhhhhHHHHHhhccc
Q psy18117          4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL   48 (215)
Q Consensus         4 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~   48 (215)
                      +..-+.+.+|||+||+||.|.+..|+.++|+||+||+++|+++..
T Consensus       159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk  203 (426)
T KOG0589|consen  159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLK  203 (426)
T ss_pred             chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcc
Confidence            334678999999999999999999999999999999999997754

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.06  E-value=1.5e-11  Score=85.99  Aligned_cols=78  Identities=15%  Similarity=0.067  Sum_probs=61.3

Q ss_pred             chhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC---Cccccccchhhh
Q psy18117        124 NIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR---RILHRGERETFL  200 (215)
Q Consensus       124 ~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~HrDikp~Ni  200 (215)
                      .+.+++..+..  .+..+++|||++++.+..+           +......++.++++++.++|..   +++|+|+||+||
T Consensus        54 ~~p~~~~~~~~--~~~~~~v~e~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Ni  120 (155)
T cd05120          54 PVPKVLASGES--DGWSYLLMEWIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNI  120 (155)
T ss_pred             CCCeEEEEcCC--CCccEEEEEecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceE
Confidence            44444444433  3568999999998767643           3455567789999999999984   799999999999


Q ss_pred             hhhccceeeccccc
Q psy18117        201 SVLGDCVRTVSEQA  214 (215)
Q Consensus       201 l~~~~~~~ki~D~~  214 (215)
                      +++..+.++++||+
T Consensus       121 l~~~~~~~~l~Df~  134 (155)
T cd05120         121 LVDDGKILGIIDWE  134 (155)
T ss_pred             EEECCcEEEEEecc
Confidence            99998999999996

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0696|consensus

Probab=99.06  E-value=9e-11  Score=92.47  Aligned_cols=49  Identities=33%  Similarity=0.695  Sum_probs=45.2

Q ss_pred             ccccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         4 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      +..+|+|+||||.|+|||++....|+...||||+|++++|+  +.|.|+|-
T Consensus       503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEm--laGQpPFd  551 (683)
T KOG0696|consen  503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM--LAGQPPFD  551 (683)
T ss_pred             CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHH--HcCCCCCC
Confidence            45677999999999999999999999999999999999999  78988885

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.05  E-value=8.1e-11  Score=85.77  Aligned_cols=70  Identities=10%  Similarity=0.123  Sum_probs=54.6

Q ss_pred             HHHHHHhhhcCCChHH-HHHHHHHhcCCchhHHHHHHHHHHHHHHHHH-HhCCccccccchhhhhhhccceeeccccc
Q psy18117        139 ELFLVLELADQGDLAL-VIAECRQKKCHLAECLVWSYFRQIAAALQYV-HSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~-~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~l-H~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      +-++||||+.+.++.. .++.     ..+++.....++.|++.++..+ |+.|++|+|++|.|||++ ++.+.|+||+
T Consensus        98 ~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~  169 (197)
T cd05146          98 KHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVS  169 (197)
T ss_pred             CCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECC
Confidence            4567999998754432 2221     2355666778889999999988 899999999999999996 5778999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0604|consensus

Probab=99.04  E-value=2.7e-10  Score=86.28  Aligned_cols=106  Identities=30%  Similarity=0.586  Sum_probs=79.2

Q ss_pred             ccccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC-------h---HHHhhCCCCCCccchhh
Q psy18117          4 KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS-------P---ERLKELKYSFPSDVWSL   73 (215)
Q Consensus         4 ~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~-------p---e~~~~~~~~~~~diws~   73 (215)
                      ++....|.|=||+|.|||++-...|++..|.||+|+..|.+  ++|.|+|.+       |   ..+..+.|.++..-|+ 
T Consensus       216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIl--LCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs-  292 (400)
T KOG0604|consen  216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWS-  292 (400)
T ss_pred             CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHh--hcCCCcccccCCccCChhHHhHhhccCccCCChhHh-
Confidence            34566789999999999999888899999999999999988  789987743       2   2334455666666664 


Q ss_pred             HHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117         74 GCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus        74 g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                                         ...+..|.+.+..+...|.+++.+...+.||+|.....+
T Consensus       293 -------------------~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v  331 (400)
T KOG0604|consen  293 -------------------CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV  331 (400)
T ss_pred             -------------------HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence                               123334445555556678899999999999999875544

>KOG0690|consensus

Probab=99.03  E-value=5.3e-10  Score=85.70  Aligned_cols=51  Identities=31%  Similarity=0.656  Sum_probs=45.6

Q ss_pred             cccccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          3 VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         3 ~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      ...+.++||||||.|.|||++.+.+|+.+.|||..|+..+||  .+|..+|..
T Consensus       320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM--mCGRLPFyn  370 (516)
T KOG0690|consen  320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM--MCGRLPFYN  370 (516)
T ss_pred             cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHH--HhccCcccc
Confidence            346778999999999999999999999999999999999999  788876654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.03  E-value=3.9e-11  Score=99.85  Aligned_cols=69  Identities=17%  Similarity=0.017  Sum_probs=52.9

Q ss_pred             HHHHHhhhcCCChHHHH--HHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccc----eeecccc
Q psy18117        140 LFLVLELADQGDLALVI--AECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC----VRTVSEQ  213 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i--~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~----~~ki~D~  213 (215)
                      ..+||||++|+.+.++-  ...+..+..+.+..+..++.|++       ..|++|||+||.||+++.+|    .++++||
T Consensus       236 ~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDF  308 (537)
T PRK04750        236 TVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDF  308 (537)
T ss_pred             ceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEec
Confidence            45999999999998752  22111111366667777777776       48999999999999999988    9999999


Q ss_pred             cC
Q psy18117        214 AK  215 (215)
Q Consensus       214 ~~  215 (215)
                      |.
T Consensus       309 Gi  310 (537)
T PRK04750        309 GI  310 (537)
T ss_pred             ce
Confidence            84

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.03  E-value=3.9e-11  Score=98.29  Aligned_cols=71  Identities=20%  Similarity=0.047  Sum_probs=55.4

Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHH-HHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        139 ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA-ALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~-~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ..++||||++|++|.++......   ..   ....++.+++. .+..+|..|++|||+||.||+++.+|.++++|||.
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~~---~~---~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~  303 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDEA---GL---DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGI  303 (437)
T ss_pred             CceEEEEeECCcccccHHHHHhc---CC---CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCC
Confidence            46799999999999987643211   11   23445556665 35788999999999999999999999999999984

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0032|consensus

Probab=98.99  E-value=6.4e-10  Score=89.37  Aligned_cols=102  Identities=27%  Similarity=0.507  Sum_probs=70.4

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHH------HhhCCCCCCccchhhHHHHH
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER------LKELKYSFPSDVWSLGCVLY   78 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~------~~~~~~~~~~diws~g~~l~   78 (215)
                      .....+.+|||+|+|||++.+..|+...|+||+|+.++.+  .+|.+++.....      +..+.+.+..+.|       
T Consensus       192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiL--L~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w-------  262 (382)
T KOG0032|consen  192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYIL--LSGVPPFWGETEFEIFLAILRGDFDFTSEPW-------  262 (382)
T ss_pred             CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHH--hhCCCCCcCCChhHHHHHHHcCCCCCCCCCc-------
Confidence            3456889999999999999999999999999999999999  678777654321      1222232222222       


Q ss_pred             HHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         79 EMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        79 e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                               .    .....++.+........|..++.+...+.||+|...
T Consensus       263 ---------~----~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  263 ---------D----DISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             ---------c----ccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence                     1    122334444444555667777788889999997764

>KOG0592|consensus

Probab=98.95  E-value=1.4e-09  Score=88.09  Aligned_cols=46  Identities=41%  Similarity=0.865  Sum_probs=39.3

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCCh
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP   56 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~p   56 (215)
                      .+|+||-.|.+||.|.+...++.+|+|+|||.+++|  +.|.|+|.+.
T Consensus       245 ~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQm--laG~PPFra~  290 (604)
T KOG0592|consen  245 SSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQM--LAGQPPFRAA  290 (604)
T ss_pred             cceeeeecccCHHHhcCCCCCcccchHHHHHHHHHH--hcCCCCCccc
Confidence            469999999999999988888999999999999988  6788888653

>KOG0595|consensus

Probab=98.93  E-value=1.2e-09  Score=85.72  Aligned_cols=58  Identities=29%  Similarity=0.646  Sum_probs=49.3

Q ss_pred             hhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHh
Q psy18117         44 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        44 ~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..+++|+|.||+||.+...+|+.+.|+||+|++++++++|+.||...  +..++...+.+
T Consensus       171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~--t~~eL~~~~~k  228 (429)
T KOG0595|consen  171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE--TPKELLLYIKK  228 (429)
T ss_pred             HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc--CHHHHHHHHhc
Confidence            46679999999999999999999999999999999999999998654  34566555544

>KOG0583|consensus

Probab=98.91  E-value=2.4e-09  Score=85.91  Aligned_cols=50  Identities=36%  Similarity=0.674  Sum_probs=42.3

Q ss_pred             cccccccccCcccccccccccCC-CC-cccchhhhhHHHHHhhcccCCCCCCCh
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELK-YS-FPSDVWSLGCVLYEVDSFLGTPYYMSP   56 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~-~~-~~~~~~s~g~~~~e~~~~~gt~~y~~p   56 (215)
                      ....+++||||+|+|||++.+.. |. .++|+||+|+.++.+  .+|..+|...
T Consensus       175 ~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~m--l~G~~PF~d~  226 (370)
T KOG0583|consen  175 DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVL--LCGRLPFDDS  226 (370)
T ss_pred             CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHH--HhCCCCCCCc
Confidence            34568999999999999999866 74 788999999999998  6788887653

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.91  E-value=8.1e-10  Score=84.70  Aligned_cols=75  Identities=16%  Similarity=0.100  Sum_probs=61.3

Q ss_pred             HHHHHHhhhcCC-ChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhc-------cceeec
Q psy18117        139 ELFLVLELADQG-DLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLG-------DCVRTV  210 (215)
Q Consensus       139 ~~~lv~e~~~~g-~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~-------~~~~ki  210 (215)
                      ..++|+|++++- +|.+++....  ....++.....++.+++..+.-||++||+|+|++|.|||++.       +..+.+
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~L  186 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSV  186 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEE
Confidence            467899999875 7888875422  123566778899999999999999999999999999999975       358899


Q ss_pred             ccccC
Q psy18117        211 SEQAK  215 (215)
Q Consensus       211 ~D~~~  215 (215)
                      +|+.+
T Consensus       187 IDl~r  191 (268)
T PRK15123        187 IDLHR  191 (268)
T ss_pred             EECCc
Confidence            99863

>KOG0667|consensus

Probab=98.90  E-value=9.3e-10  Score=90.76  Aligned_cols=90  Identities=28%  Similarity=0.550  Sum_probs=69.6

Q ss_pred             ccccccccCCCCcc-cchhhhhHHHHHh---hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccc
Q psy18117         18 MSPERLKELKYSFP-SDVWSLGCVLYEV---DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS   93 (215)
Q Consensus        18 ~~p~~~~~~~~~~~-~~~~s~g~~~~e~---~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~   93 (215)
                      .-||++.-..++.. .-|=-||.++++-   .++.=+.+|.+||.+.+..|+.+.|+|||||+++||++| .|++++...
T Consensus       315 LKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne  393 (586)
T KOG0667|consen  315 LKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNE  393 (586)
T ss_pred             CChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCH
Confidence            35888765454432 2333477777663   446677899999999999999999999999999999999 788888888


Q ss_pred             hhHHHHHHHhhcCCC
Q psy18117         94 LNGLCKRIEMALFPP  108 (215)
Q Consensus        94 ~~~l~k~i~~~~~~~  108 (215)
                      .+++..+++..+.|+
T Consensus       394 ~DQl~~I~e~lG~Pp  408 (586)
T KOG0667|consen  394 YDQLARIIEVLGLPP  408 (586)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            888888777655543

>KOG1024|consensus

Probab=98.90  E-value=5.4e-10  Score=87.51  Aligned_cols=98  Identities=14%  Similarity=0.195  Sum_probs=81.0

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh----cCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----KCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .....|||+..+..+... +....+.++.+..-|+|..++..++..    -..++..+.-.++.|++.|++|||+.||||
T Consensus       341 ly~~sH~nll~V~~V~ie-~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViH  419 (563)
T KOG1024|consen  341 LYGASHPNLLSVLGVSIE-DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIH  419 (563)
T ss_pred             HhcCcCCCccceeEEEee-ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            456679999998887654 245667778888889999999865522    134777788899999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .||-..|+++|+.-.+||+|=|+
T Consensus       420 kDiAaRNCvIdd~LqVkltDsaL  442 (563)
T KOG1024|consen  420 KDIAARNCVIDDQLQVKLTDSAL  442 (563)
T ss_pred             chhhhhcceehhheeEEeccchh
Confidence            99999999999999999999663

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.90  E-value=6.5e-10  Score=85.40  Aligned_cols=73  Identities=18%  Similarity=0.127  Sum_probs=47.7

Q ss_pred             HHHHhhhcCCChHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeeccccc
Q psy18117        141 FLVLELADQGDLALVIAECRQKKC---HLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       141 ~lv~e~~~~g~L~~~i~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      +++|+-+.+ ||.+++........   .+.......+..|+++.++++|++|++|+||||+|++++.+|.++|+||+
T Consensus       115 ~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~  190 (288)
T PF14531_consen  115 FLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFS  190 (288)
T ss_dssp             EEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GG
T ss_pred             hhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChH
Confidence            344555544 77777654321111   12333345566999999999999999999999999999999999999986

>KOG0590|consensus

Probab=98.89  E-value=2e-10  Score=97.31  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=81.8

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH-hCCccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH-SRRILH  192 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~i~H  192 (215)
                      .+...+. |.|++...+....  .+..++.++|+++|++...+..  ......+...+..++.|+..|+.|+| ..++.|
T Consensus        72 ~~~~~~s~h~n~~~~~~~~~~--~~~~~~~~~~s~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h  147 (601)
T KOG0590|consen   72 DIQKKLSKHSNTVHMIEPSSS--PRSYLLSLSYSDGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTH  147 (601)
T ss_pred             cccccccccccccccCCccCC--CcccccccCccccccccccccc--CCccCCCCcchhhhhhhhccCccccCccccccc
Confidence            3344444 9999999988765  5688999999999999998831  11125788899999999999999999 999999


Q ss_pred             cccchhhhhhhccc-eeecccccC
Q psy18117        193 RGERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      |||||+|.+++..+ .+|++||+.
T Consensus       148 ~~ikP~n~~l~~s~~~l~~~df~~  171 (601)
T KOG0590|consen  148 RDIKPSNSLLDESGSALKIADFGL  171 (601)
T ss_pred             CCCCCccchhccCCCcccCCCchh
Confidence            99999999999999 999999973

>KOG1023|consensus

Probab=98.89  E-value=3.1e-10  Score=92.59  Aligned_cols=93  Identities=22%  Similarity=0.367  Sum_probs=82.6

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc-cccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI-LHRGER  196 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-~HrDik  196 (215)
                      +.+.|.|+.++.+.+.+  +...+.|.+||..|+|.+.+...   ...++..-...+.++++.|+.|+|+-.| .|.-++
T Consensus         2 ~~l~h~n~~~f~g~~~~--~~~~~~i~~~c~rGsl~D~i~~~---~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~   76 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVD--GPEMIVIWEYCSRGSLLDILSNE---DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK   76 (484)
T ss_pred             cccchhhhhhheeeEec--CCceEEEEeeecCccHHhHHhcc---ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence            56789999999999877  46888999999999999999652   3358888888999999999999998777 999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      ..|.++|...++||+|||.
T Consensus        77 s~nClvd~~w~lklt~~Gl   95 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGL   95 (484)
T ss_pred             cccceeeeeEEEEechhhh
Confidence            9999999999999999984

>KOG0582|consensus

Probab=98.88  E-value=2.1e-09  Score=85.33  Aligned_cols=44  Identities=36%  Similarity=0.761  Sum_probs=37.4

Q ss_pred             cccccCcccccccccc--cCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          9 DSFLGTPYYMSPERLK--ELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~--~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      +++.|||+|||||++.  ..+|+.++|+||||+..+|+.  .|+.+|.
T Consensus       188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA--~G~aPf~  233 (516)
T KOG0582|consen  188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELA--HGHAPFS  233 (516)
T ss_pred             ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHh--cCCCCcc
Confidence            7899999999999964  367999999999999999995  5776663

>KOG0588|consensus

Probab=98.88  E-value=1.5e-09  Score=89.96  Aligned_cols=108  Identities=28%  Similarity=0.506  Sum_probs=76.5

Q ss_pred             cccccc-cCCCCcccchhhhhHHHHH-----hhcccCCCCCCChHHHhhCCCC-CCccchhhHHHHHHHHhcCCCccccc
Q psy18117         19 SPERLK-ELKYSFPSDVWSLGCVLYE-----VDSFLGTPYYMSPERLKELKYS-FPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        19 ~p~~~~-~~~~~~~~~~~s~g~~~~e-----~~~~~gt~~y~~pe~~~~~~~~-~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      -||++. +...+.+..-  ||+...|     +.+.||+|.|.+||.+.+..|+ .++|+||.|++++.+++|+.||..+ 
T Consensus       139 KpENlLLd~~~nIKIAD--FGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-  215 (786)
T KOG0588|consen  139 KPENLLLDVKNNIKIAD--FGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-  215 (786)
T ss_pred             CchhhhhhcccCEeeec--cceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-
Confidence            466653 4445554433  6655554     3557999999999999999885 7899999999999999999999754 


Q ss_pred             cchhHHHHHHHhhcCCC------------------CCCCcccCCccCCCcchhhhhh
Q psy18117         92 ISLNGLCKRIEMALFPP------------------LPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus        92 ~~~~~l~k~i~~~~~~~------------------~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                       +.+.+..++..+.+..                  .|..++.....+.||++..+-.
T Consensus       216 -Nir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  216 -NIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             -cHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence             4566666666654421                  2444456666778988876543

>KOG0614|consensus

Probab=98.88  E-value=1.1e-09  Score=88.42  Aligned_cols=51  Identities=29%  Similarity=0.597  Sum_probs=37.5

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChH
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE   57 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe   57 (215)
                      +..|-||||||.|.|||++...+...+.|.||+|+..+|+  +.|+|+|.++.
T Consensus       573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL--L~G~pPFs~~d  623 (732)
T KOG0614|consen  573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL--LTGSPPFSGVD  623 (732)
T ss_pred             CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH--HcCCCCCCCCc
Confidence            4456677777777777777777777777777777777777  56777776553

>KOG0599|consensus

Probab=98.86  E-value=1.2e-09  Score=81.86  Aligned_cols=101  Identities=27%  Similarity=0.526  Sum_probs=65.1

Q ss_pred             cccccccCccccccccccc------CCCCcccchhhhhHHHHHhhcccCCCCCCC-h-----HHHhhCCCCCCccchhhH
Q psy18117          7 SVDSFLGTPYYMSPERLKE------LKYSFPSDVWSLGCVLYEVDSFLGTPYYMS-P-----ERLKELKYSFPSDVWSLG   74 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~------~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~-p-----e~~~~~~~~~~~diws~g   74 (215)
                      ..+..||||+|.|||.+.+      .+|+.-.|.||+|+.++.+  +.|+|+|-- .     ..+.+++|.+.+.-|+  
T Consensus       178 kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTL--LaGcpPFwHRkQmlMLR~ImeGkyqF~speWa--  253 (411)
T KOG0599|consen  178 KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTL--LAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA--  253 (411)
T ss_pred             hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHH--HcCCCchhHHHHHHHHHHHHhcccccCCcchh--
Confidence            3467899999999999863      4688889999999999998  567765522 2     1234555666555553  


Q ss_pred             HHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhh
Q psy18117         75 CVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus        75 ~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                                    ....+    .|.+........|..++.....+.||+.+.+.
T Consensus       254 --------------dis~~----~KdLIsrlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  254 --------------DISAT----VKDLISRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             --------------hcccc----HHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence                          11111    22222233334456666777788888886654

>KOG0660|consensus

Probab=98.86  E-value=1.3e-09  Score=84.30  Aligned_cols=128  Identities=22%  Similarity=0.346  Sum_probs=75.5

Q ss_pred             hhcccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCC
Q psy18117         44 VDSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHH  122 (215)
Q Consensus        44 ~~~~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h  122 (215)
                      +..++.|.+|.+||.+.+ ..|+...|+||.||+++||++|+ |.|.+.....++...+...+.|   .+  .....+..
T Consensus       184 mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk-plFpG~d~v~Ql~lI~~~lGtP---~~--e~l~~i~s  257 (359)
T KOG0660|consen  184 MTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK-PLFPGKDYVHQLQLILELLGTP---SE--EDLQKIRS  257 (359)
T ss_pred             hhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC-CCCCCCchHHHHHHHHHhcCCC---CH--HHHHHhcc
Confidence            455789999999999876 45899999999999999999986 5556666777776665554433   21  12233333


Q ss_pred             cchhhhhhhhcCCchhHHHHHHhhhcCC--ChH-HHHHHHHHhcCCchhHHHHHHHHH
Q psy18117        123 PNIVELRSAFASRSGQELFLVLELADQG--DLA-LVIAECRQKKCHLAECLVWSYFRQ  177 (215)
Q Consensus       123 ~~iv~l~~~~~~~~~~~~~lv~e~~~~g--~L~-~~i~~~~~~~~~~~~~~~~~~~~q  177 (215)
                      ++..++.............-++.-++..  ||. ..|...+.+|.+..++.++.|+.+
T Consensus       258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence            4444433333222111222222222220  111 223344566777777777777654

>KOG0574|consensus

Probab=98.85  E-value=6.6e-10  Score=84.39  Aligned_cols=24  Identities=13%  Similarity=0.015  Sum_probs=15.8

Q ss_pred             hcCCCCCCCcccCCccCCCcchhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      .++-..|.++....+.+.|++|..
T Consensus       265 ~CLiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  265 SCLIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             HHhcCCHHHHHHHHHHhhhhhhcC
Confidence            334455666767777888887754

>KOG0596|consensus

Probab=98.85  E-value=3.5e-09  Score=86.17  Aligned_cols=62  Identities=31%  Similarity=0.405  Sum_probs=33.7

Q ss_pred             CCCccchhhHHHHHHHHhcCCCcccc---------------------ccchhHHHHHHHhhcCCCCCCCcccCCccCCCc
Q psy18117         65 SFPSDVWSLGCVLYEMVALQSPFFSK---------------------HISLNGLCKRIEMALFPPLPSGVLYSDKTLHHP  123 (215)
Q Consensus        65 ~~~~diws~g~~l~e~~~g~~p~~~~---------------------~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~  123 (215)
                      +.++|+||+||++|+|+.|+.||..-                     ...... +-.+.+.++...|..+..+...+.||
T Consensus       550 ~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~-li~~mK~CL~rdPkkR~si~eLLqhp  628 (677)
T KOG0596|consen  550 SRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDE-LIDVMKCCLARDPKKRWSIPELLQHP  628 (677)
T ss_pred             cCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchH-HHHHHHHHHhcCcccCCCcHHHhcCc
Confidence            35567777777777777776666211                     111111 12233334445566666677777777


Q ss_pred             chhh
Q psy18117        124 NIVE  127 (215)
Q Consensus       124 ~iv~  127 (215)
                      ++.-
T Consensus       629 Fl~~  632 (677)
T KOG0596|consen  629 FLQI  632 (677)
T ss_pred             cccc
Confidence            6554

>KOG0610|consensus

Probab=98.84  E-value=4.9e-09  Score=82.53  Aligned_cols=45  Identities=33%  Similarity=0.653  Sum_probs=38.5

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+|+||..|+|||++.+.+.+-+.|||+||+.+|||  +-|+.+|.
T Consensus       292 SnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEm--LyG~TPFK  336 (459)
T KOG0610|consen  292 SNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEM--LYGTTPFK  336 (459)
T ss_pred             ccccccccccccceeeecCCCCchhhHHHHHHHHHHH--HhCCCCcC
Confidence            3679999999999999999999999999999999999  56666653

>KOG0198|consensus

Probab=98.83  E-value=1.8e-09  Score=83.96  Aligned_cols=105  Identities=26%  Similarity=0.349  Sum_probs=57.1

Q ss_pred             ccccccCcccccccccccC-CCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          8 VDSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~-~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      ...+.|||.|||||++... ...+++|+||+||...||  +.|.++|..-       +..      ...++........|
T Consensus       178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM--~Tg~~PW~~~-------~~~------~~~~~~ig~~~~~P  242 (313)
T KOG0198|consen  178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEM--LTGKPPWSEF-------FEE------AEALLLIGREDSLP  242 (313)
T ss_pred             cccccCCccccCchhhcCCCcCCccchhhhcCCEEEec--cCCCCcchhh-------cch------HHHHHHHhccCCCC
Confidence            3467788888888888752 233477888888888887  4455555321       000      00011111112223


Q ss_pred             ccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhh
Q psy18117         87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      .....  +....+.+...++...|..+..+...+.||++..-.
T Consensus       243 ~ip~~--ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  243 EIPDS--LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             CCCcc--cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            22222  223344555555566677777777888888876533

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.81  E-value=6.4e-10  Score=79.65  Aligned_cols=62  Identities=16%  Similarity=0.073  Sum_probs=50.0

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc-----cccccchhhhhhhccceeeccccc
Q psy18117        140 LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI-----LHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-----~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      -++||||+++.++...            .......+.++++++..||+.++     +|+|+||.||+++ ++.++++||+
T Consensus        66 ~~lv~e~i~G~~l~~~------------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~  132 (170)
T cd05151          66 GVLITEFIEGSELLTE------------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE  132 (170)
T ss_pred             CeEEEEecCCCccccc------------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence            4689999999877643            01123456899999999999885     9999999999998 6788999996

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0580|consensus

Probab=98.80  E-value=3.1e-09  Score=78.06  Aligned_cols=81  Identities=28%  Similarity=0.379  Sum_probs=60.3

Q ss_pred             ccccccccCCCC--cccchhhhhHHHHH----hhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         18 MSPERLKELKYS--FPSDVWSLGCVLYE----VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        18 ~~p~~~~~~~~~--~~~~~~s~g~~~~e----~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      +.||++.-+.-+  +.+|   ||++.++    ..+++||..|.+||+..+..++...|+|++|++++|++.|..||....
T Consensus       150 iKpenlLlg~~~~lkiAd---fGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~  226 (281)
T KOG0580|consen  150 IKPENLLLGSAGELKIAD---FGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS  226 (281)
T ss_pred             CCHHHhccCCCCCeeccC---CCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh
Confidence            457776532222  2334   6666665    456899999999999999999999999999999999999999997654


Q ss_pred             cchhHHHHHHHh
Q psy18117         92 ISLNGLCKRIEM  103 (215)
Q Consensus        92 ~~~~~l~k~i~~  103 (215)
                        ..+..++|.+
T Consensus       227 --~~etYkrI~k  236 (281)
T KOG0580|consen  227 --HSETYKRIRK  236 (281)
T ss_pred             --hHHHHHHHHH
Confidence              3455555554

>KOG1033|consensus

Probab=98.79  E-value=1.4e-09  Score=88.01  Aligned_cols=73  Identities=19%  Similarity=0.302  Sum_probs=64.5

Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        139 ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .+|+.|++|...+|.++|..+. .....+......++.|++.|++|   ++.+|||+||.||....++.+||.|||+
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGL  402 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhh
Confidence            5899999999999999996422 23357778899999999999999   9999999999999999999999999985

>KOG0601|consensus

Probab=98.78  E-value=2.4e-09  Score=87.77  Aligned_cols=87  Identities=20%  Similarity=0.227  Sum_probs=68.3

Q ss_pred             CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhh
Q psy18117        122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLS  201 (215)
Q Consensus       122 h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil  201 (215)
                      |.+++.+...+..  .+..|+-.|||+++++...+.. .   ..+.+...+.+..|++.++.++|+..++|+|+||+||+
T Consensus       325 ~~~~~g~~~~W~~--~r~~~ip~e~~~~~s~~l~~~~-~---~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~  398 (524)
T KOG0601|consen  325 HLPSVGKNSSWSQ--LRQGYIPLEFCEGGSSSLRSVT-S---QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNIL  398 (524)
T ss_pred             ccccCCCCCCccc--cccccCchhhhcCcchhhhhHH-H---HhcCcchhhhhHHHHHhccccccchhhhccccccccee
Confidence            3444544444443  3456678899999888877632 1   24889999999999999999999999999999999999


Q ss_pred             hhcc-ceeeccccc
Q psy18117        202 VLGD-CVRTVSEQA  214 (215)
Q Consensus       202 ~~~~-~~~ki~D~~  214 (215)
                      +..+ +..++.|++
T Consensus       399 i~~~~~~~~~~~~~  412 (524)
T KOG0601|consen  399 ISNDGFFSKLGDFG  412 (524)
T ss_pred             eccchhhhhccccc
Confidence            9886 688888876

>KOG1266|consensus

Probab=98.78  E-value=1.4e-09  Score=83.59  Aligned_cols=189  Identities=15%  Similarity=0.112  Sum_probs=119.0

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcC-CC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQ-SP   86 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~-~p   86 (215)
                      +++-.++-.|.+|+.......+...+.++++++--+.+...|-    .-|...      ..|+--.-++...|.+.. .+
T Consensus        24 ~s~~~r~~~~~~pv~~~~ts~s~~~s~~~~eIleesp~~rw~k----rreqv~------qrdvPgid~v~lamd~e~g~e   93 (458)
T KOG1266|consen   24 SSEAMRYMSYIAPVGENATSLSSADSEDESEILEESPCGRWGK----RREQVG------QRDVPGIDDVYLAMDTEEGVE   93 (458)
T ss_pred             cccccccccccCCccccccccCcccccchhhhhccCchhhhhh----hhhhcc------CCCCCchHHHHHHhhhccCch
Confidence            3456667777889988776677778888888776443321111    111111      122222222333333321 11


Q ss_pred             ccccccchhHHHHHHHh--hcCCCCCCCcccCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHH
Q psy18117         87 FFSKHISLNGLCKRIEM--ALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQ  161 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~--~~~~~~~~~~~~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~  161 (215)
                      .     .++++..-..+  ...+...+.++.-+.++.|.|++++..++.+...   .++.++.||++.|+|..+|+....
T Consensus        94 v-----vwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~  168 (458)
T KOG1266|consen   94 V-----VWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK  168 (458)
T ss_pred             h-----hHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH
Confidence            1     11111111110  0000001111223346679999999999876432   246788999999999999998776


Q ss_pred             hcCCchhHHHHHHHHHHHHHHHHHHhC--Cccccccchhhhhhhccceeecc
Q psy18117        162 KKCHLAECLVWSYFRQIAAALQYVHSR--RILHRGERETFLSVLGDCVRTVS  211 (215)
Q Consensus       162 ~~~~~~~~~~~~~~~ql~~~l~~lH~~--~i~HrDikp~Nil~~~~~~~ki~  211 (215)
                      ....+.+..-++|..||++||.|||+.  .|+|..+--.-|.+..+|-+||.
T Consensus       169 ~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  169 NQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEec
Confidence            666789999999999999999999964  79999999999999999988874

>KOG0695|consensus

Probab=98.77  E-value=4.2e-09  Score=81.20  Aligned_cols=47  Identities=34%  Similarity=0.815  Sum_probs=40.4

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.|+||||||.|+|||.+.+..|+...|||++|++.+||  ..|..+|
T Consensus       405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem--magrspf  451 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM--MAGRSPF  451 (593)
T ss_pred             CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH--HcCCCCc
Confidence            4678899999999999999999999999999999999998  4555444

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.76  E-value=3e-09  Score=78.81  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=60.7

Q ss_pred             HHHHHHhhhcC-CChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccc---eeeccccc
Q psy18117        139 ELFLVLELADQ-GDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC---VRTVSEQA  214 (215)
Q Consensus       139 ~~~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~---~~ki~D~~  214 (215)
                      +.++|+|++++ -+|.+++....    ..+......++.+++..+.-||.+||+|+|++|.|||++.++   .+-++|+.
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld  166 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLD  166 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcch
Confidence            45788999887 47888885422    266777889999999999999999999999999999999887   88888985

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.74  E-value=1.1e-08  Score=73.74  Aligned_cols=44  Identities=32%  Similarity=0.645  Sum_probs=39.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++|+++|+.||...
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~  107 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEE  107 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence            36899999999998888999999999999999999999998643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0659|consensus

Probab=98.73  E-value=3.5e-08  Score=73.77  Aligned_cols=59  Identities=29%  Similarity=0.569  Sum_probs=50.7

Q ss_pred             cCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCC
Q psy18117         48 LGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP  107 (215)
Q Consensus        48 ~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~  107 (215)
                      +-|.+|.+||.+.+ +.|+...|+||.||++.|++.+ .|++++..+.+++.+.+..-+.|
T Consensus       162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~~LGTP  221 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFRALGTP  221 (318)
T ss_pred             eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHHHcCCC
Confidence            56789999999876 4599999999999999999975 68999999999999888876544

>KOG4279|consensus

Probab=98.73  E-value=2.8e-09  Score=89.24  Aligned_cols=48  Identities=33%  Similarity=0.789  Sum_probs=35.3

Q ss_pred             cccccccccCccccccccccc--CCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~--~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      |.+|-||.||.-|||||++-.  .+|++++|+|||||...||.  .|.|+|.
T Consensus       730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMA--TGrPPF~  779 (1226)
T KOG4279|consen  730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMA--TGRPPFV  779 (1226)
T ss_pred             CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeec--cCCCCee
Confidence            566778888888888888754  35778888888888888884  4666653

>PTZ00284 protein kinase; Provisional

Probab=98.73  E-value=8.7e-09  Score=85.66  Aligned_cols=43  Identities=35%  Similarity=0.840  Sum_probs=28.8

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      +++||+.|+|||.+.+..|+.++|+||+||.++|+  +.|.++|.
T Consensus       304 ~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el--ltG~~pf~  346 (467)
T PTZ00284        304 AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL--YTGKLLYD  346 (467)
T ss_pred             cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH--HhCCCCCC
Confidence            45677777777777666677777777777777776  34555553

>KOG0986|consensus

Probab=98.69  E-value=8.6e-09  Score=82.23  Aligned_cols=47  Identities=38%  Similarity=0.725  Sum_probs=37.5

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .....+.+||++|||||++....|+...||||+||.++||  ..|..+|
T Consensus       340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYem--i~G~sPF  386 (591)
T KOG0986|consen  340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEM--IAGHSPF  386 (591)
T ss_pred             CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHH--HcccCch
Confidence            3445567899999999999888899999999999999998  4555554

>KOG0658|consensus

Probab=98.68  E-value=6.3e-08  Score=75.19  Aligned_cols=62  Identities=32%  Similarity=0.605  Sum_probs=47.8

Q ss_pred             hcccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCC
Q psy18117         45 DSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP  107 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~  107 (215)
                      .++.-|.+|.+||.+.+.. |+.+.|+||.||+++||+.|+ |.+.+....+++...+..-+.|
T Consensus       183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~-plFpG~s~~dQL~eIik~lG~P  245 (364)
T KOG0658|consen  183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ-PLFPGDSSVDQLVEIIKVLGTP  245 (364)
T ss_pred             eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC-cccCCCCHHHHHHHHHHHhCCC
Confidence            3456778999999998754 999999999999999999986 5555666777776655544443

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.65  E-value=2.8e-08  Score=78.69  Aligned_cols=43  Identities=40%  Similarity=0.812  Sum_probs=28.8

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+++||+.|+|||.+.+..++.++|+||+|+.++++  +.|.++|
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el--ltg~~Pf  195 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM--MCGRLPF  195 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhh--hcCCCCC
Confidence            456677777777777666677777777777777777  3455544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.64  E-value=1.7e-08  Score=72.61  Aligned_cols=42  Identities=33%  Similarity=0.492  Sum_probs=36.8

Q ss_pred             cccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117         11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus        11 ~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..||+.|||||.+.+..++.++|+||+|+.++|+.  .|.++|.
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ell--tg~~p~~  105 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEAL--DYELPYN  105 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHH--hCCCCcc
Confidence            37999999999999999999999999999999994  5666653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4645|consensus

Probab=98.62  E-value=5.2e-09  Score=92.56  Aligned_cols=42  Identities=40%  Similarity=0.820  Sum_probs=22.7

Q ss_pred             ccCCCCCCChHHHhhC---CCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~---~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..|||-|||||.+.+.   +...+.||||+||+..||++|+.||.
T Consensus      1398 ~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~ 1442 (1509)
T KOG4645|consen 1398 MMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWA 1442 (1509)
T ss_pred             hcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchh
Confidence            3555555555555432   23344556666666666666665554

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.60  E-value=8.1e-08  Score=75.95  Aligned_cols=43  Identities=40%  Similarity=0.805  Sum_probs=26.5

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~--~g~~Pf  196 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML--CGHAPF  196 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHh--hCCCCC
Confidence            3456666666666666666666666666666666663  355544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0192|consensus

Probab=98.59  E-value=8.7e-08  Score=76.60  Aligned_cols=63  Identities=33%  Similarity=0.533  Sum_probs=48.3

Q ss_pred             ccCCCCCCChHHHh--hCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHH-HhhcCCCCCC
Q psy18117         47 FLGTPYYMSPERLK--ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI-EMALFPPLPS  111 (215)
Q Consensus        47 ~~gt~~y~~pe~~~--~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i-~~~~~~~~~~  111 (215)
                      ..||+.|||||.+.  +..|+.++|+||+|++++|+++++.||.....  .++...+ ....++.+|.
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~Rp~~p~  269 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGLRPPIPK  269 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCCCCCCCc
Confidence            68999999999998  56799999999999999999999999975543  2333333 3445555444

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.58  E-value=1.4e-07  Score=74.87  Aligned_cols=47  Identities=47%  Similarity=0.800  Sum_probs=38.6

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCCh
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP   56 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~p   56 (215)
                      .....||+.|+|||.+.+..++.++|+||+|+.++++.  .|..+|..+
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~--tg~~p~~~~  205 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA--IGRYPIPPP  205 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH--hCCCCCCCC
Confidence            34678999999999998888999999999999999984  576666543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.58  E-value=6.4e-08  Score=75.20  Aligned_cols=44  Identities=34%  Similarity=0.674  Sum_probs=33.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|+.||...
T Consensus       169 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  212 (290)
T cd07862         169 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS  212 (290)
T ss_pred             ccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCC
Confidence            35777888888887777777888888888888888877776543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.57  E-value=7.1e-08  Score=74.84  Aligned_cols=42  Identities=38%  Similarity=0.632  Sum_probs=28.1

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .|++.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~  203 (287)
T cd07848         162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPG  203 (287)
T ss_pred             ccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCC
Confidence            466667777766665566667777777777777777666643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.57  E-value=5.7e-08  Score=84.15  Aligned_cols=42  Identities=38%  Similarity=0.651  Sum_probs=25.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+..++...|+||+||+++|+++|+.||.
T Consensus       540 ~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~  581 (669)
T cd05610         540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFN  581 (669)
T ss_pred             eeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            456666666666555555555666666666666666655554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0593|consensus

Probab=98.56  E-value=6.2e-08  Score=73.80  Aligned_cols=54  Identities=28%  Similarity=0.668  Sum_probs=45.7

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHH
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI  101 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i  101 (215)
                      ++.|.||.+||.+.+ ..|+.+.|+|+.||++.||++|+ |++++..+.+++..+.
T Consensus       161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~-pL~PG~SDiDQLy~I~  215 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE-PLWPGRSDIDQLYLIR  215 (396)
T ss_pred             hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC-cCCCCcchHHHHHHHH
Confidence            578999999999877 67999999999999999999996 5566667888875543

>KOG0983|consensus

Probab=98.55  E-value=4.2e-08  Score=73.77  Aligned_cols=68  Identities=35%  Similarity=0.527  Sum_probs=51.0

Q ss_pred             hhhhHHHHHhhc-----ccCCCCCCChHHHh---hCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHH
Q psy18117         35 WSLGCVLYEVDS-----FLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE  102 (215)
Q Consensus        35 ~s~g~~~~e~~~-----~~gt~~y~~pe~~~---~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~  102 (215)
                      ..||++.....+     ..|.+.||+||++.   ...|+-.+|+||+|+.+.|+++|+.||.....+...+-+...
T Consensus       234 CDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln  309 (391)
T KOG0983|consen  234 CDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN  309 (391)
T ss_pred             ecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence            346666644322     35889999999985   346888899999999999999999999876666555544444

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=2.3e-08  Score=71.29  Aligned_cols=66  Identities=14%  Similarity=0.140  Sum_probs=54.7

Q ss_pred             hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        138 QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       138 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ..-.++|||.+|-.|.+.+...           .-.++..+-.-+.-||.+||+|.||-++||++.+++ +-++|||+
T Consensus        72 ~~~~I~me~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGL  137 (204)
T COG3642          72 DNGLIVMEYIEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGL  137 (204)
T ss_pred             CCCEEEEEEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCc
Confidence            4567899999998888787542           256777888888999999999999999999997766 77889985

>KOG0584|consensus

Probab=98.54  E-value=6.6e-08  Score=79.83  Aligned_cols=91  Identities=23%  Similarity=0.406  Sum_probs=60.7

Q ss_pred             hhhHHHHHh----hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCCC
Q psy18117         36 SLGCVLYEV----DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPS  111 (215)
Q Consensus        36 s~g~~~~e~----~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~~  111 (215)
                      -+|.....-    .+..|||.|||||+.. ..|+...|+||||+.+.||+++.-||. ......++.|++..+..|    
T Consensus       189 DLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs-EC~n~AQIYKKV~SGiKP----  262 (632)
T KOG0584|consen  189 DLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS-ECTNPAQIYKKVTSGIKP----  262 (632)
T ss_pred             chhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh-hhCCHHHHHHHHHcCCCH----
Confidence            356555432    3357999999999886 568888999999999999999888874 333556666666655443    


Q ss_pred             CcccCCccCCCcchhhhhhhhcCC
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASR  135 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~  135 (215)
                         .....+.+|.+-++++-|...
T Consensus       263 ---~sl~kV~dPevr~fIekCl~~  283 (632)
T KOG0584|consen  263 ---AALSKVKDPEVREFIEKCLAT  283 (632)
T ss_pred             ---HHhhccCCHHHHHHHHHHhcC
Confidence               233444566666666555443

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.54  E-value=1.4e-07  Score=74.60  Aligned_cols=43  Identities=40%  Similarity=0.737  Sum_probs=29.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~--~G~~pf  196 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEML--AGQSPF  196 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHh--hCCCCC
Confidence            4456777777777777666777777777777777763  355554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.53  E-value=7.4e-08  Score=74.82  Aligned_cols=44  Identities=48%  Similarity=0.931  Sum_probs=37.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++..+|+||+|++++++++|+.||...
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  204 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR  204 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence            46888899999988878888889999999999999998888654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.52  E-value=1.1e-07  Score=75.55  Aligned_cols=28  Identities=18%  Similarity=0.204  Sum_probs=18.8

Q ss_pred             hcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                      ..+...|..+..+...+.||++..+...
T Consensus       272 ~~l~~~P~~Rpt~~e~l~hp~f~~~~~~  299 (338)
T cd07859         272 RLLAFDPKDRPTAEEALADPYFKGLAKV  299 (338)
T ss_pred             HHcCcCcccCCCHHHHhcCchhhhcCcc
Confidence            3444557777777788888887665544

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0607|consensus

Probab=98.51  E-value=1.1e-07  Score=72.98  Aligned_cols=125  Identities=20%  Similarity=0.294  Sum_probs=69.0

Q ss_pred             ccccccccccCcccccccccc-----cCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHH
Q psy18117          4 KTSSVDSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLY   78 (215)
Q Consensus         4 ~~~~~~~~~g~~~~~~p~~~~-----~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~   78 (215)
                      .+...-|.+|+-.|||||++.     ...|.++.|.||+|+.+|.|  +.|.|+|..-.. ...+++.-...-..--.++
T Consensus       239 stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYIm--LsGYpPFvG~Cg-~dCGWdrGe~Cr~CQ~~LF  315 (463)
T KOG0607|consen  239 STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIM--LSGYPPFVGHCG-ADCGWDRGEVCRVCQNKLF  315 (463)
T ss_pred             CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHH--HhCCCCccCccC-CcCCccCCCccHHHHHHHH
Confidence            344556899999999999974     24589999999999999998  678777642211 1112221111111111223


Q ss_pred             HHH-hcCCCccccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117         79 EMV-ALQSPFFSKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus        79 e~~-~g~~p~~~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                      |.+ -|+.-|..+. ..+...++.+....+...+..++...+.++||++......
T Consensus       316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            322 2222222111 1122333443333333445566677788889988765543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.51  E-value=8.8e-08  Score=74.66  Aligned_cols=44  Identities=36%  Similarity=0.738  Sum_probs=33.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~  201 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD  201 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            45778888888877777777788888888888888888777543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0600|consensus

Probab=98.50  E-value=2.4e-07  Score=74.91  Aligned_cols=62  Identities=29%  Similarity=0.505  Sum_probs=49.8

Q ss_pred             hcccCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCC
Q psy18117         45 DSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP  107 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~  107 (215)
                      .+-+-|.||.+||.+.+. .|+...|+||.||++.||+.|+ |.+.+..++.++-+++..++.|
T Consensus       277 T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gk-PI~~G~tEveQl~kIfklcGSP  339 (560)
T KOG0600|consen  277 TSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGK-PILQGRTEVEQLHKIFKLCGSP  339 (560)
T ss_pred             ccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCC-CCcCCccHHHHHHHHHHHhCCC
Confidence            345678999999998764 5999999999999999999986 4556666788887777766544

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.48  E-value=1.5e-07  Score=74.31  Aligned_cols=42  Identities=52%  Similarity=0.895  Sum_probs=26.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~  197 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH  197 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence            346666666666655556666666666666666666666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	215
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-21
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		3e-13
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		7e-12
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		8e-12
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-11
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		8e-09
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-07
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-08
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-07
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-07
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-07
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-07
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-07
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-07
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-07
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		6e-07
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-07
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		7e-07
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		8e-07
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		8e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		9e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		9e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-06
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-06
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-06
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-06
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-06
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-06
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-06
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-06
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		8e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		3e-06
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		8e-04
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-06
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		4e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-06
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		4e-06
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		4e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		5e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		5e-06
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-06
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		5e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		5e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-06
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		5e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		6e-06
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-06
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		7e-06
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		7e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-06
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		7e-06
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		8e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		9e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-05
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-05
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-05
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-05
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-05
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-05
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-05
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-05
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-05
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-05
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-05
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-05
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-05
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-05
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		1e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-05
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		1e-05
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		1e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		1e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-05
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-05
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-05
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-05
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-05
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-05
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-05
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-05
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-05
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-05
3soa_A	444	Full-Length Human Camkii Length = 444		2e-05
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-05
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-05
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-05
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		4e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		4e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-05
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-05
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		5e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		5e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		6e-05
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-05
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-05
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-05
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		7e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-05
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		7e-05
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-05
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		7e-05
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		8e-05
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		9e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		9e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		9e-05
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		9e-05
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		9e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-04
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-04
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-04
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-04
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-04
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-04
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-04
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-04
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		4e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-04
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		4e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		4e-04
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		4e-04
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		4e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		4e-04
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		4e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		4e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		4e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		4e-04
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		4e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		4e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		4e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		4e-04
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		4e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		4e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		4e-04
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		4e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		4e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		4e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		4e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		4e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		5e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		5e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-04
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		5e-04
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		5e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		5e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		5e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-04
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		5e-04
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		5e-04
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-04
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		5e-04
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-04
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		6e-04
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		6e-04
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		6e-04
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		6e-04
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		6e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		6e-04
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		7e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		7e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-04
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		7e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		7e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		8e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		8e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		8e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		8e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		8e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		8e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		8e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		8e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		8e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		9e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		9e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		9e-04

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 106 FPPLPS 111
           +PPLPS
Sbjct: 255 YPPLPS 260

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPN+++  ++F   +  EL +VLELAD GDL+ +I   +++K  + E  VW YF Q
Sbjct: 87  KQLNHPNVIKYYASFIEDN--ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 178 IAAALQYVHSRRILHRGER--ETFLSVLG 204
           + +AL+++HSRR++HR  +    F++  G
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATG 173

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
           F  +P    YSD            K  H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        R+   L++V+E  + GDLA VI +  +++ +L E  V     Q
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
           +  AL+  H R      +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
           F  +P    YSD            K  H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        R+   L++V+E  + GDLA VI +  +++ +L E  V     Q
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
           +  AL+  H R      +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
            F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGK 232
Query: 106 FPPLPSGVLYSD------------KTLHHPNIVEL 128
           F  +P    YSD            K  H P++ E+
Sbjct: 233 FRRIP--YRYSDELNEIITRMLNLKDYHRPSVEEI 265

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        R+   L++V+E  + GDLA VI +  +++ +L E  V     Q
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 178 IAAALQYVHSR-----RILHR 193
           +  AL+  H R      +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GTPYY+SPE  +   Y+  SD+W+LGCVLYE+  L+  F +   S+  L  +I    FP
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGSFP 243
Query: 108 PL 109
           P+
Sbjct: 244 PV 245

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
            + HPNIV+ R +F       L++V++  + GDL   I    QK     E  +  +F QI
Sbjct: 79  NMKHPNIVQYRESFEENGS--LYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQI 134
Query: 179 AAALQYVHSRRILHR 193
             AL++VH R+ILHR
Sbjct: 135 CLALKHVHDRKILHR 149

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +   +GT  YM+PE +K  +Y+F  D W+LGC+LYEM+A QSPF
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +   +GT  YM+PE +K  +Y+F  D W+LGC+LYEM+A QSPF
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 20/81 (24%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           +SF+GT  YMSPERL+   YS  SD+WS+G  L EM   + P  S   S         MA
Sbjct: 180 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS---------MA 230
Query: 105 LF-----------PPLPSGVL 114
           +F           P LPSGV 
Sbjct: 231 IFELLDYIVNEPPPKLPSGVF 251

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YM+PERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL--AVGR-YPIPPPDAKELEAI 224
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V          ++ +     + +S +G+  R  MA+F           P LP+GV 
Sbjct: 225 FGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVF 284
Query: 115 YSD 117
             D
Sbjct: 285 TPD 287

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 40  VLYEVDSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
            L + DSF+GTPY+M+PE      +K+  Y + +D+WSLG  L EM  ++ P    H  L
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHEL 217
Query: 95  NGLCKRIEMALFPP 108
           N +   +++A   P
Sbjct: 218 NPMRVLLKIAKSDP 231

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 40  VLYEVDSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
            L + DSF+GTPY+M+PE      +K+  Y + +D+WSLG  L EM  ++ P    H  L
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHEL 225
Query: 95  NGLCKRIEMALFPP 108
           N +   +++A   P
Sbjct: 226 NPMRVLLKIAKSDP 239

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L EM  ++ P    H  LN +  
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
            +++A   P
Sbjct: 249 LLKIAKSEP 257

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L EM  ++ P    H  LN +  
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
            +++A   P
Sbjct: 249 LLKIAKSEP 257

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 241
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V                  +K     G+  R  MA+F           P LPSGV 
Sbjct: 242 FGCQVEGDAAETPPRPRTPGRPLNKF----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 297

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           +SF+GT  YMSPERL+   YS  SD+WS+G  L EM   + P        +    R  MA
Sbjct: 161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED---SRPPMA 217
Query: 105 LF-----------PPLPSGVL 114
           +F           P LPSGV 
Sbjct: 218 IFELLDYIVNEPPPKLPSGVF 238

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V                  S +    G+  R  MA+F           P LPSGV 
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V                  S +    G+  R  MA+F           P LPSGV 
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+L++E A  G++   ++A  R K     E    S FR
Sbjct: 66  KILNHPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR 118
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H +RI+HR
Sbjct: 119 QIVSAVQYCHQKRIVHR 135

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V                  S +    G+  R  MA+F           P LPSGV 
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 158 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 214
Query: 66  FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF-----------PPLPSGVL 114
           F   V                  S +    G+  R  MA+F           P LPSGV 
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSY----GMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+L++E A  G++   ++A  R K     E    S FR
Sbjct: 69  KILNHPNIVKLFEVIETE--KTLYLIMEYASGGEVFDYLVAHGRMK-----EKEARSKFR 121
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H +RI+HR
Sbjct: 122 QIVSAVQYCHQKRIVHR 138

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            +SF+GT  Y+SPE L E   S  SD+W+LGC++Y++VA   PF
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           D F+GTPY+M+PE +     K+  Y + +DVWSLG  L EM  ++ P    H  LN +  
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRV 248
Query: 100 RIEMALFPP 108
            +++A   P
Sbjct: 249 LLKIAKSEP 257

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
           +HP +V L S F + S   LF V+E  + GDL   +   RQ+K  L E     Y  +I+ 
Sbjct: 111 NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 164
Query: 181 ALQYVHSRRILHR 193
           AL Y+H R I++R
Sbjct: 165 ALNYLHERGIIYR 177

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EM+  + P+F++
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            +GTPY+M+PE +  L Y    D+WSLG ++ EMV  + P+F++
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYS 65
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+   +G  Y + P   KEL+  
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM--AVGR-YPIPPPDAKELELM 276
Query: 66  F 66
           F
Sbjct: 277 F 277

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
           +HP +V L S F + S   LF V+E  + GDL   +   RQ+K  L E     Y  +I+ 
Sbjct: 79  NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 132
Query: 181 ALQYVHSRRILHR 193
           AL Y+H R I++R
Sbjct: 133 ALNYLHERGIIYR 145

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 69  KILNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 121
Query: 177 QIAAALQYVHSRRILHRGERETFLSVLGD 205
           QI +A+QY H + I+HR  +   L + GD
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGD 150

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
           +HP +V L S F + S   LF V+E  + GDL   +   RQ+K  L E     Y  +I+ 
Sbjct: 64  NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 117
Query: 181 ALQYVHSRRILHR 193
           AL Y+H R I++R
Sbjct: 118 ALNYLHERGIIYR 130

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF
Sbjct: 170 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
           +HP +V L S F + S   LF V+E  + GDL   +   RQ+K  L E     Y  +I+ 
Sbjct: 68  NHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHMQ--RQRK--LPEEHARFYSAEISL 121
Query: 181 ALQYVHSRRILHR 193
           AL Y+H R I++R
Sbjct: 122 ALNYLHERGIIYR 134

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  +SF+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 184 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 243
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 244 IKLEYDFPEKFF 255

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +YS 
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 67  PSDVWSLGCVLYEMVALQSP 86
           P  +  +   L + +    P
Sbjct: 235 PKHINPVAASLIQKMLQTDP 254

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
           +  GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 237
Query: 64  YSFPSDVWSLGCVLYEMVALQSP 86
           YS P  +  +   L + +    P
Sbjct: 238 YSIPKHINPVAASLIQKMLQTDP 260

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +YS 
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 67  PSDVWSLGCVLYEMVALQSP 86
           P  +  +   L + +    P
Sbjct: 259 PKHINPVAASLIQKMLQTDP 278

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
           +  GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 233
Query: 64  YSFPSDVWSLGCVLYEMVALQSP 86
           YS P  +  +   L + +    P
Sbjct: 234 YSIPKHINPVAASLIQKMLQTDP 256

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
           +  GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNE 233
Query: 64  YSFPSDVWSLGCVLYEMVALQSP 86
           YS P  +  +   L + +    P
Sbjct: 234 YSIPKHINPVAASLIQKMLQTDP 256

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            +SF+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           LHHPNI+ L + F  R  + ++L+LE A +G+L   +    QK C   E    +   ++A
Sbjct: 80  LHHPNILRLYNYFYDR--RRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELA 133
Query: 180 AALQYVHSRRILHR 193
            AL Y H ++++HR
Sbjct: 134 DALMYCHGKKVIHR 147

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HP+IVEL   ++S     L++V E  D  DL   I +        +E +   Y RQI 
Sbjct: 83  LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 180 AALQYVHSRRILHR 193
            AL+Y H   I+HR
Sbjct: 141 EALRYCHDNNIIHR 154

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  +SF  DVWS+GC++Y +   +G P + +        R+K+ +YS 
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL--LVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 67  PSDVWSLGCVLYEMVALQSP 86
           P  +  +   L + +    P
Sbjct: 261 PKHINPVAASLIQKMLQTDP 280

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 83  LQSPF 87
            + PF
Sbjct: 232 GEPPF 236

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HP+IVEL   ++S     L++V E  D  DL   I +        +E +   Y RQI 
Sbjct: 85  LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 180 AALQYVHSRRILHR 193
            AL+Y H   I+HR
Sbjct: 143 EALRYCHDNNIIHR 156

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83  LQSPF 87
            + PF
Sbjct: 215 GEPPF 219

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HP+IVEL   ++S     L++V E  D  DL   I +        +E +   Y RQI 
Sbjct: 83  LKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 180 AALQYVHSRRILHR 193
            AL+Y H   I+HR
Sbjct: 141 EALRYCHDNNIIHR 154

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE LK+  YS P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 246
Query: 64  YSFPSDVWS 72
           Y +PS  W 
Sbjct: 247 YDYPSPEWD 255

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83  LQSPF 87
            + PF
Sbjct: 215 GEPPF 219

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83  LQSPF 87
            + PF
Sbjct: 215 GEPPF 219

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83  LQSPF 87
            + PF
Sbjct: 215 GEPPF 219

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 43  EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + + F GTP Y++PE L   KY+   D WS G +LYEM+  QSPF
Sbjct: 175 KTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE LK+  YS P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 222
Query: 64  YSFPSDVWS 72
           Y +PS  W 
Sbjct: 223 YDYPSPEWD 231

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE LK+  YS P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 223
Query: 64  YSFPSDVWS 72
           Y +PS  W 
Sbjct: 224 YDYPSPEWD 232

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +  GTP Y++PE L +  +SF  D+WSLGC+LY ++  + PF
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP Y++PE L +  +SF  D+WSLGC+LY ++  + PF
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 43  EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + + F GTP Y++PE L   KY+   D WS G +LYEM+  QSPF
Sbjct: 174 KTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP Y++PE L +  +SF  D+WSLGC+LY ++  + PF
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP Y++PE L +  +SF  D+WSLGC+LY ++  + PF
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
           + F+GTP++M+PE +K+  Y F +D+WSLG    E+   + P
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE LK+  YS P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQIKAGA 223
Query: 64  YSFPSDVWS 72
           Y +PS  W 
Sbjct: 224 YDYPSPEWD 232

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 23  LKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA 82
           +K + +     +   G  + +  + +GT  Y+SPE+ +       SDV+SLGCVLYE++ 
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 83  LQSPF 87
            + PF
Sbjct: 215 GEPPF 219

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
            +GTPY+M+PE +    Y+   D+WSLG ++ EMV  + P+FS
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 29/131 (22%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYIL--LVGYPPFWDEDQHKLYQQIKAGA 249
Query: 64  YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHP 123
           Y FPS  W        +        ++ +++N              P+  + +D+ L HP
Sbjct: 250 YDFPSPEWDT------VTPEAKNLINQMLTIN--------------PAKRITADQALKHP 289
Query: 124 NIVELRSAFAS 134
            + + RS  AS
Sbjct: 290 WVCQ-RSTVAS 299

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYIL--LVGYPPFWDEDQHKLYQQIKAGA 222
Query: 64  YSFPSDVWS 72
           Y FPS  W 
Sbjct: 223 YDFPSPEWD 231

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP 86
           + F+GT  YMSPERL+   YS  SD+WS+G  L EM   + P
Sbjct: 164 NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  ++F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 185 KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 245 IKLEYDFPEKFF 256

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +  +GTP++M+PE ++E+ Y+  +D+WSLG    EM   + P+   H
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGRMK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 190 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 249
Query: 60  KELKYSFPS 68
            +L+Y FP+
Sbjct: 250 IKLEYDFPA 258

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           + +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           + +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 309 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 355

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 184 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 243
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 244 IKLEYDFPEKFF 255

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 169 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 228
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 229 IKLEYDFPEKFF 240

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 41  LYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           L ++ + +GT YY +PER  E   ++ +D+++L CVLYE +    P+    +S+ G    
Sbjct: 189 LTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXG--AH 246
Query: 101 IEMALFPPLPSGV 113
           I  A+  P PS V
Sbjct: 247 INQAI--PRPSTV 257

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 254

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 187 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 246
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 247 IKLEYDFPEKFF 258

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 245 IKLEYDFPEKFF 256

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 185 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 244
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 245 IKLEYDFPEKFF 256

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 211

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 290

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 239

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  + F+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 192 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 251
Query: 60  KELKYSFPSDVW 71
            +L+Y FP   +
Sbjct: 252 IKLEYDFPEKFF 263

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 240

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 246

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 244

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HPNI+ L   F +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 84  REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 137
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS+RI H
Sbjct: 138 ILDGVHYLHSKRIAH 152

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GTP Y++PE L+E+ Y    D W++G +LYEM+   +PF
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH-ISLN-GLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H ++++ G+  RI M  +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 245

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HPNI+ L   F +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 63  REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 116
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS+RI H
Sbjct: 117 ILDGVHYLHSKRIAH 131

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVI-----AECRQKKCHLAECLVW 172
           + L HPN++ L+  F S + ++++L+ + A+  DL  +I     ++  +K   L   +V 
Sbjct: 73  RELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVK 131
Query: 173 SYFRQIAAALQYVHSRRILHRGERETFLSVLGD 205
           S   QI   + Y+H+  +LHR  +   + V+G+
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGE 164

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HPNI+ L   F +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 70  REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 123
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS+RI H
Sbjct: 124 ILDGVHYLHSKRIAH 138

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + F+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
           ++D+F G+P Y +PE  +  KY  P  DVWSLG +LY +V+   PF  +++ 
Sbjct: 161 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 212

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV+E A  G++   ++A    K     E    + FR
Sbjct: 61  KVLNHPNIVKLFEVIETE--KTLYLVMEYASGGEVFDYLVAHGWMK-----EKEARAKFR 113
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 114 QIVSAVQYCHQKFIVHR 130

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +         +++K   
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 229
Query: 64  YSFPSDVWS 72
           Y FPS  W 
Sbjct: 230 YDFPSPEWD 238

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 222
Query: 64  YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHP 123
           Y FPS  W        +        +K +++N              P+  + + + L HP
Sbjct: 223 YDFPSPEWDT------VTPEAKDLINKMLTIN--------------PAKRITASEALKHP 262
Query: 124 NIVELRSAFAS 134
            I + RS  AS
Sbjct: 263 WICQ-RSTVAS 272

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 240
Query: 64  YSFPSDVWS 72
           Y FPS  W 
Sbjct: 241 YDFPSPEWD 249

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 212

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPFFSKHIS 93
           ++D+F G P Y +PE  +  KY  P  DVWSLG +LY +V+   PF  +++ 
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HPNIV+L     +   + L+LV E A  G++   ++A  R K     E    + FR
Sbjct: 68  KVLNHPNIVKLFEVIETE--KTLYLVXEYASGGEVFDYLVAHGRXK-----EKEARAKFR 120
Query: 177 QIAAALQYVHSRRILHR 193
           QI +A+QY H + I+HR
Sbjct: 121 QIVSAVQYCHQKFIVHR 137

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE------RLKELK 63
            F GTP Y+SPE L++  Y  P D+W+ G +LY +   +G P +   +      ++K   
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL--LVGYPPFWDEDQHRLYQQIKAGA 222
Query: 64  YSFPSDVWS 72
           Y FPS  W 
Sbjct: 223 YDFPSPEWD 231

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 214

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           +F GTP Y++PE L +  Y    D W LG VLYEM+    PF+S++ +
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA 245

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
            + GTP +M+PE L   +Y F  D ++LG  LYEM+A + PF ++   +    L +R+  
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
                L   V Y DK
Sbjct: 406 -----LEQAVTYPDK 415

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
            + GTP +M+PE L   +Y F  D ++LG  LYEM+A + PF ++   +    L +R+  
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
                L   V Y DK
Sbjct: 406 -----LEQAVTYPDK 415

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
            + GTP +M+PE L   +Y F  D ++LG  LYEM+A + PF ++   +    L +R+  
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
                L   V Y DK
Sbjct: 406 -----LEQAVTYPDK 415

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEM 103
            + GTP +M+PE L   +Y F  D ++LG  LYEM+A + PF ++   +    L +R+  
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-- 405
Query: 104 ALFPPLPSGVLYSDK 118
                L   V Y DK
Sbjct: 406 -----LEQAVTYPDK 415

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 10  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
           +F+GTP +M+PE +++++ Y F +D+WS G    E+ +    PY+  P  +K L  +  +
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPP-MKVLMLTLQN 237
Query: 69  DVWSL--GCVLYEMVALQSPFFSKHISL 94
           D  SL  G    EM+      F K ISL
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISL 265

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGD----LALVIAECRQKKCHLAECLVWSYFR 176
           HHPNIV   ++F  +   EL+LV++L   G     +  ++A+   K   L E  + +  R
Sbjct: 66  HHPNIVSYYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 177 QIAAALQYVHSRRILHR 193
           ++   L+Y+H    +HR
Sbjct: 124 EVLEGLEYLHKNGQIHR 140

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 10  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
           +F+GTP +M+PE +++++ Y F +D+WS G    E+ +    PY+  P  +K L  +  +
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG-AAPYHKYPP-MKVLMLTLQN 242
Query: 69  DVWSL--GCVLYEMVALQSPFFSKHISL 94
           D  SL  G    EM+      F K ISL
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISL 270

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGD----LALVIAECRQKKCHLAECLVWSYFR 176
           HHPNIV   ++F  +   EL+LV++L   G     +  ++A+   K   L E  + +  R
Sbjct: 71  HHPNIVSYYTSFVVKD--ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 177 QIAAALQYVHSRRILHR 193
           ++   L+Y+H    +HR
Sbjct: 129 EVLEGLEYLHKNGQIHR 145

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 228

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 19  SPERLKELKYSFPSDVWSLGCVLYEVDSFL------GTPYYMSPERLKELKYSFPSDVWS 72
           SP  L + KY+    V   G    +  +FL      GTP +M+PE L++   +  SDV+S
Sbjct: 167 SPNLLVDKKYTV--KVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 73  LGCVLYEMVALQSPFFSKH----ISLNGL-CKRIEM 103
            G +L+E+  LQ P+ + +    ++  G  CKR+E+
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE +    Y    D W+ G +LYEM+A Q+PF
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L HPNI+++   F       +++V+E  + G+L   I   + +   L+E  V    +Q
Sbjct: 75  KSLDHPNIIKIFEVFEDY--HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 178 IAAALQYVHSRRILHR 193
           +  AL Y HS+ ++H+
Sbjct: 133 MMNALAYFHSQHVVHK 148

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  YS   D WS+G + Y +    G P +         E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67  PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
            S  W       + ++  +  F +H+      KR   E AL  P  +G    DK +H   
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
             +++  FA    ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 45  DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTPY+M+PE +      +  Y F SD+WSLG    EM     P    H
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  YS   D WS+G + Y +    G P +         E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67  PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
            S  W       + ++  +  F +H+      KR   E AL  P  +G    DK +H   
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
             +++  FA    ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +++  Y   +D+WSLG    E+   + P    H
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ + + F  R  + ++L+LE A +G+L   +    QK     E    ++  ++A
Sbjct: 72  LRHPNILRMYNYFHDR--KRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 125
Query: 180 AALQYVHSRRILHR 193
            AL Y H R+++HR
Sbjct: 126 DALHYCHERKVIHR 139

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ + + F  R  + ++L+LE A +G+L   +    QK     E    ++  ++A
Sbjct: 71  LRHPNILRMYNYFHDR--KRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELA 124
Query: 180 AALQYVHSRRILHR 193
            AL Y H R+++HR
Sbjct: 125 DALHYCHERKVIHR 138

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP Y+SPE      +   SDVWSLGC+ Y ++  + PF
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------ERLKELKYSF 66
           GTP Y++PE L +  YS   D WS+G + Y +    G P +         E++ + +Y F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 67  PSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPN 124
            S  W       + ++  +  F +H+      KR   E AL  P  +G    DK +H   
Sbjct: 238 DSPYW-------DDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSV 290
Query: 125 IVELRSAFASRSGQELF 141
             +++  FA    ++ F
Sbjct: 291 SEQIKKNFAKSKWKQAF 307

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 208

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPN+V+L       +   L++V EL +QG     + E    K  L+E     YF+ 
Sbjct: 91  KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKP-LSEDQARFYFQD 145
Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
           +   ++Y+H ++I+HR  + + L V  D
Sbjct: 146 LIKGIEYLHYQKIIHRDIKPSNLLVGED 173

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 36  SLGCVLYEVD---SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
             GC  ++ D   S + T  Y +PE +  L +   SD+WS GCVL E+    S  F  H 
Sbjct: 205 DFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT-GSLLFRTHE 263
Query: 93  SLNGLCKRIEMALFPPLPSGVLY 115
            +  L   +  ++  P+P  +LY
Sbjct: 264 HMEHLA--MMESIIQPIPKNMLY 284

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 25/113 (22%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF- 106
           LGT YY++PE L++ KY    DVWS G +LY ++    PF  +  +   + KR+E   F 
Sbjct: 167 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQEILKRVEKGKFS 223
Query: 107 --PP-------------------LPSGVLYSDKTLHHPNIVELRSAFASRSGQ 138
             PP                    PS  + +++ L+HP IV+  S   +  G+
Sbjct: 224 FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGK 276

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 36  SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
            LG  +Y+    + + +Y SPE L  + Y    D+WSLGC+L EM   + P FS    ++
Sbjct: 191 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVD 246
Query: 96  GLCKRIEMALFPP 108
            + K +E+   PP
Sbjct: 247 QMNKIVEVLGIPP 259

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 19  SPERLKELKYSFPSDVWSLGCVLYEVDSFL------GTPYYMSPERLKELKYSFPSDVWS 72
           SP  L + KY+    V   G    +   FL      GTP +M+PE L++   +  SDV+S
Sbjct: 167 SPNLLVDKKYTV--KVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 73  LGCVLYEMVALQSPFFSKH----ISLNGL-CKRIEM 103
            G +L+E+  LQ P+ + +    ++  G  CKR+E+
Sbjct: 225 FGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 38  GCVLYEVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
             ++   + F+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 162 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 38  GCVLYEVDSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
             ++   + F+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+
Sbjct: 201 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 36  SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
            LG  +Y+    + + +Y SPE L  + Y    D+WSLGC+L EM     P FS    ++
Sbjct: 210 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM-HTGEPLFSGANEVD 265
Query: 96  GLCKRIEMALFPP 108
            + K +E+   PP
Sbjct: 266 QMNKIVEVLGIPP 278

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 36  SLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
            LG  +Y+    + + +Y SPE L  + Y    D+WSLGC+L EM     P FS    ++
Sbjct: 210 QLGQRIYQX---IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM-HTGEPLFSGANEVD 265
Query: 96  GLCKRIEMALFPP 108
            + K +E+   PP
Sbjct: 266 QMNKIVEVLGIPP 278

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 209 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 260
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 261 QMLLAVQYLHENGIIHR 277

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 195 KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 246
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 247 QMLLAVQYLHENGIIHR 263

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           F GTP Y++PE +    Y    D W+ G +LYEM+A Q+PF
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           TPYY++PE L   KY    D WSLG + Y ++    PF+S H
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           LHHP ++ L  AF  +   E+ L+LE    G+L   IA    K   ++E  V +Y RQ  
Sbjct: 105 LHHPKLINLHDAFEDK--YEMVLILEFLSGGELFDRIAAEDYK---MSEAEVINYMRQAC 159
Query: 180 AALQYVHSRRILH 192
             L+++H   I+H
Sbjct: 160 EGLKHMHEHSIVH 172

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 25/103 (24%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF- 106
           LGT YY++PE L++ KY    DVWS G +LY ++    PF  +  +   + KR+E   F 
Sbjct: 184 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQEILKRVEKGKFS 240
Query: 107 --PP-------------------LPSGVLYSDKTLHHPNIVEL 128
             PP                    PS  + +++ L+HP IV+ 
Sbjct: 241 FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HPNI+ L   + +R+  ++ L+LEL   G+L   +A+    K  L+E    S+ +QI   
Sbjct: 74  HPNIITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDG 127
Query: 182 LQYVHSRRILH 192
           + Y+H+++I H
Sbjct: 128 VNYLHTKKIAH 138

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 116 SDKTLHHPNIVELRSAFASRSGQE-LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           SD +L   +     S  +SRS  + LF+ +E  D+G L   I + R +K  L + L    
Sbjct: 84  SDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLALEL 141
Query: 175 FRQIAAALQYVHSRRILHR 193
           F QI   + Y+HS++++HR
Sbjct: 142 FEQITKGVDYIHSKKLIHR 160

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 70  KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A +G++   +    QK     E    +Y  ++A
Sbjct: 70  LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A +G++   +    QK     E    +Y  ++A
Sbjct: 70  LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 76  KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 127
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 128 QMLLAVQYLHENGIIHR 144

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 70  KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 70  KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 121
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 122 QMLLAVQYLHENGIIHR 138

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFR 176
           K L+HP I+++++ F     ++ ++VLEL + G+L   V+   R K+   A C +  YF 
Sbjct: 69  KKLNHPCIIKIKNFF---DAEDYYIVLELMEGGELFDKVVGNKRLKE---ATCKL--YFY 120
Query: 177 QIAAALQYVHSRRILHR 193
           Q+  A+QY+H   I+HR
Sbjct: 121 QMLLAVQYLHENGIIHR 137

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +GT  YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 289
Query: 101 I 101
           I
Sbjct: 290 I 290

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 289
Query: 101 I 101
           I
Sbjct: 290 I 290

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 44  VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFF 88
            ++F GT  YM+PE + +    Y   +D+WSLGC + EM   + PF+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 284
Query: 101 I 101
           I
Sbjct: 285 I 285

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 44  VDSFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFF 88
            ++F GT  YM+PE + +    Y   +D+WSLGC + EM   + PF+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
           +GTP Y+SPE L+ +     KY    D WSLG  +YEM+  ++PF+++ +
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++YEM A   PFF+
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
           +GTP Y+SPE L+ +     KY    D WSLG  +YEM+  ++PF+++ +
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI++L+  F + +  E+ LVLEL   G+L   I E    K + +E       +QI 
Sbjct: 105 LSHPNIIKLKEIFETPT--EISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQIL 158
Query: 180 AALQYVHSRRILHR 193
            A+ Y+H   I+HR
Sbjct: 159 EAVAYLHENGIVHR 172

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           + +PE L+E K+S  SDVWS G +L+E+ SF   PY   P
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           + +PE L+E K+S  SDVWS G +L+E+ SF   PY   P
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S        G+ +RI +  +
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK--HISLNGLCKRIEMALF 106
           TPYY++PE L   KY    D+WSLG ++Y ++    PF+S        G+ +RI +  +
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 17  YMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           + +PE L+E K+S  SDVWS G +L+E+ SF   PY   P
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 44  VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
           +D  + T +Y +PE L +  Y+ P D+WS+GC+  EM   + P F  +   + L K  ++
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDL 226
Query: 104 ALFPP 108
              PP
Sbjct: 227 IGLPP 231

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           LGT YY++PE L++ KY    DVWS+G +L+ ++A   PF
Sbjct: 199 LGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            F GTP Y++PE +    Y    D W+ G +LYEM+A Q PF
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL-FP 107
           GTP Y++PE +    Y+   D WS G ++YEM+A  +PF+  + ++    K +   L FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-TMKTYEKILNAELRFP 223
Query: 108 PL 109
           P 
Sbjct: 224 PF 225

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GT YY++PE L+   Y    DVWS G +LY +++   PF+ K+     + KR+E   + 
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
             LP     SD
Sbjct: 241 FDLPQWRTISD 251

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  L+EM+   +PF++   SL G   +
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--SLVGTYSK 290
Query: 101 I 101
           I
Sbjct: 291 I 291

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 259

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            GTP +++PE +     SFP+D+WS+G + Y +++  SPF   +
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GT YY++PE L+   Y    DVWS G +LY +++   PF+ K  +   + KR+E   + 
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
             LP     SD
Sbjct: 241 FDLPQWRTISD 251

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           +GT YY++PE L+   Y    DVWS G +LY +++   PF+ K  +   + KR+E   + 
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRVETGKYA 240
Query: 108 -PLPSGVLYSD 117
             LP     SD
Sbjct: 241 FDLPQWRTISD 251

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 249

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L +L+ Y +  D+WSLGC+   M+  + PFF  H + + L K
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 41  LYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           L + +  LGT  Y SPE+ K       +D++S+G VLYEM+  + PF
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 43  EVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           E +  + + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF  H + + L +
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 42  YEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           Y++   LGT YY++PE LK+ KY+   DVWS G ++Y ++    PF
Sbjct: 203 YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L HPNI++L   F  +  +  +LV E  + G+L   I   R K     EC   +  +Q
Sbjct: 101 KSLDHPNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIIN-RHK---FDECDAANIMKQ 154
Query: 178 IAAALQYVHSRRILHR 193
           I + + Y+H   I+HR
Sbjct: 155 ILSGICYLHKHNIVHR 170

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
           GTP Y++PE +    Y+   D W+LG ++Y+M A   PFF+
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 48  LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
           +GTP Y+SPE L+ +     +Y    D WSLG  +YEM+  ++PF+++ +
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Query: 45  DSFLGTPYYMSPERLKELKYSFPS-----------DVWSLGCVLYEMVALQSPF 87
           DS +G   YM PE +K++  S  +           DVWSLGC+LY M   ++PF
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 68  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 121
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 122 ILNGVYYLHSLQIAH 136

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 68  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 121
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 122 ILNGVYYLHSLQIAH 136

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL 94
           T +Y +PE L +  Y    D+WSLG +LY M++ Q PF S   SL
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL 216

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HPNIV+L   F  +     FLV+EL + G+L   I    +KK H +E       R++ +A
Sbjct: 65  HPNIVKLHEVFHDQ--LHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSA 118
Query: 182 LQYVHSRRILHR 193
           + ++H   ++HR
Sbjct: 119 VSHMHDVGVVHR 130

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 91  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 144
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 145 NALSYCHSKRVIHR 158

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           + + T +Y +PE + EL +S P DVWS+GC+++E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 79
           + + T +Y +PE + EL +S P DVWS+GC+++E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFE 245

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 91  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 144
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 145 NALSYCHSKRVIHR 158

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 66  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G     +    QK     E    +Y  ++A
Sbjct: 68  LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 69  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G     +    QK     E    +Y  ++A
Sbjct: 69  LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSRFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+HS +I H
Sbjct: 123 ILNGVYYLHSLQIAH 137

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 68  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---- 56
           M  K   + +  GTP Y++PE L +  YS   D WS+G + Y +    G P +       
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL--LCGYPPFYDENDSK 229
Query: 57  --ERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSG 112
             E++ + +Y F S  W       + ++  +  F +++      KR   E A   P  +G
Sbjct: 230 LFEQILKAEYEFDSPYW-------DDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAG 282
Query: 113 VLYSDKTLHHPNIVELRSAFASRSGQELF 141
               +K +H     ++R  FA    ++ F
Sbjct: 283 DTALNKNIHESVSAQIRKNFAKSKWRQAF 311

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 70  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G     +    QK     E    +Y  ++A
Sbjct: 69  LRHPNILRLYGYF--HDATRVYLILEYAPLG----TVYRELQKLSRFDEQRTATYITELA 122
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 123 NALSYCHSKRVIHR 136

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 67  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 120
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 121 NALSYCHSKRVIHR 134

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 68  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 82  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 135
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 136 NALSYCHSKRVIHR 149

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 66  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 66  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 119
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 120 NALSYCHSKRVIHR 133

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 70  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 64  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 117
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 118 NALSYCHSKRVIHR 131

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 68  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L     + +  +L+LV E  DQ DL   +         L   L+ SY  Q
Sbjct: 60  KELNHPNIVKLLDVIHTEN--KLYLVFEHVDQ-DLKKFMDASALTGIPLP--LIKSYLFQ 114
Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS R+LHR
Sbjct: 115 LLQGLAFCHSHRVLHR 130

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 67  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 120
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 121 NALSYCHSKRVIHR 134

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 68  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 121
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 122 NALSYCHSKRVIHR 135

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           T +Y +PE L +  Y+ P D+WS+GC+  EM   + P F  +   + L K  ++   PP
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPP 231

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 70  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 123
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 124 NALSYCHSKRVIHR 137

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           L HPNI+ L   F       ++L+LE A  G +   +    QK     E    +Y  ++A
Sbjct: 65  LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELA 118
Query: 180 AALQYVHSRRILHR 193
            AL Y HS+R++HR
Sbjct: 119 NALSYCHSKRVIHR 132

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + LHH N++ L   + +R+  ++ L+LEL   G+L   +A+    K  L+E    S+ +Q
Sbjct: 71  QVLHH-NVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123
Query: 178 IAAALQYVHSRRILH 192
           I   + Y+H+++I H
Sbjct: 124 ILDGVNYLHTKKIAH 138

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	215
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-28
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-23
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	9e-27
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-24
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-26
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-21
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-19
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-16
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-20
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-19
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-19
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-17
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-18
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-09
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-18
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-09
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-17
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-11
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-16
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-13
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-16
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	6e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-16
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-13
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-12
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-16
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-15
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-14
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-14
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-08
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-14
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-14
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-13
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-13
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-13
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-12
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-12
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-12
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-07
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-08
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-12
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-12
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-08
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-12
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	9e-07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-10
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-12
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-12
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-08
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-12
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-12
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-12
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-12
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	5e-12
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-12
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-12
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	5e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	7e-12
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	7e-12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-12
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	5e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	8e-12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-11
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	9e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-10
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-09
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-10
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-11
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-11
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-11
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-09
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-11
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-07
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-09
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-11
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-10
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-11
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-05
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-11
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	6e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-11
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-11
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-05
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-11
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-11
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	6e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	9e-11
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	8e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-07
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-08
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-07
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-10
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	7e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-10
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-10
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-07
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-10
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-10
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-05
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	8e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-09
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-08
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-09
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-09
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	8e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-09
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-04
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-06
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	7e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-09
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-08
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	8e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-06
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-06
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-08
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	8e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-05
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-07
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-07
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	8e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	9e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	9e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-05
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	3e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	8e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	9e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-04
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-04

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  108 bits (272), Expect = 1e-28
 Identities = 44/72 (61%), Positives = 55/72 (76%), Gaps = 1/72 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           S +GTPYYMSPER+ E  Y+F SD+WSLGC+LYEM ALQSPF+   ++L  LCK+IE   
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254

Query: 106 FPPLPSGVLYSD 117
           +PPLPS   YS+
Sbjct: 255 YPPLPSDH-YSE 265

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 93.9 bits (234), Expect = 3e-23
 Identities = 33/76 (43%), Positives = 53/76 (69%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPN+++  ++F      EL +VLELAD GDL+ +I   +++K  + E  VW YF Q
Sbjct: 87  KQLNHPNVIKYYASF--IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144

Query: 178 IAAALQYVHSRRILHR 193
           + +AL+++HSRR++HR
Sbjct: 145 LCSALEHMHSRRVMHR 160

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  102 bits (257), Expect = 9e-27
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 4/72 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGK 232

Query: 106 FPPLPSGVLYSD 117
           F  +P    YSD
Sbjct: 233 FRRIPYR--YSD 242

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 95.0 bits (237), Expect = 6e-24
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        R+   L++V+E  + GDLA VI +  +++ +L E  V     Q
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119

Query: 178 IAAALQYVHSRR-----ILHR 193
           +  AL+  H R      +LHR
Sbjct: 120 LTLALKECHRRSDGGHTVLHR 140

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  102 bits (256), Expect = 3e-26
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GTPYY+SPE  +   Y+  SD+W+LGCVLYE+  L+  F +   S+  L  +I    
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG--SMKNLVLKIISGS 241

Query: 106 FPPLPSGVLYSD 117
           FPP+     YS 
Sbjct: 242 FPPVSLH--YSY 251

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 90.9 bits (226), Expect = 5e-22
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             + HPNIV+ R +F       L++V++  + GDL   I    QK     E  +  +F Q
Sbjct: 78  ANMKHPNIVQYRESF--EENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQ 133

Query: 178 IAAALQYVHSRRILHR 193
           I  AL++VH R+ILHR
Sbjct: 134 ICLALKHVHDRKILHR 149

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 91.3 bits (227), Expect = 3e-22
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 118 KTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +  +HPNI+ L +      G   E +L+L    +G L   I   + K   L E  +    
Sbjct: 81  RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140

Query: 176 RQIAAALQYVHSRRILHR 193
             I   L+ +H++   HR
Sbjct: 141 LGICRGLEAIHAKGYAHR 158

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 75.9 bits (187), Expect = 1e-16
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 41  LYEVDSFLGTPYYMSPERLKELKY---SFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
           L +  +   T  Y +PE      +      +DVWSLGCVLY M+  + P+       + +
Sbjct: 197 LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256

Query: 98  CKRIEMALFPPLPSGVLYSDK 118
              ++  L  P      +S  
Sbjct: 257 ALAVQNQLSIPQSPR--HSSA 275

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 13  GTPYYMSPERLKELKY---SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL------K 63
            T  Y +PE      +      +DVWSLGCVLY +  F   PY M  ++   +      +
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM-MFGEGPYDMVFQKGDSVALAVQNQ 263

Query: 64  YSFPSD 69
            S P  
Sbjct: 264 LSIPQS 269

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 87.3 bits (217), Expect = 5e-21
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 16/90 (17%)

Query: 118 KTLHHPNIVELRSAF--------------ASRSGQELFLVLELADQGDLALVIAECRQKK 163
             L H NIV     +              +    + LF+ +E  D+G L   I   +++ 
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE--KRRG 116

Query: 164 CHLAECLVWSYFRQIAAALQYVHSRRILHR 193
             L + L    F QI   + Y+HS+++++R
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINR 146

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 83.5 bits (207), Expect = 1e-19
 Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
              GT  YMSPE++    Y    D+++LG +L E++ +    F      +     +   +
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDGI 235

Query: 106 FPPLPS 111
              +  
Sbjct: 236 ISDIFD 241

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 75.4 bits (186), Expect = 1e-16
 Identities = 15/59 (25%), Positives = 23/59 (38%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPS 68
              GT  YMSPE++    Y    D+++LG +L E+     T +  S             
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISD 238

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 84.3 bits (209), Expect = 9e-20
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           GT  YMSPE++    YS   D++SLG +L+E++    PF ++          +    FPP
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQM-ERVRTLTDVRNLKFPP 247

Query: 109 LPSGVLYSDKTL 120
           L +     +  +
Sbjct: 248 LFTQKYPCEYVM 259

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 82.0 bits (203), Expect = 5e-19
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 11/86 (12%)

Query: 118 KTLHHPNIVELRSAF----------ASRSGQELFLVLELADQGDLALVIAECRQKKCHLA 167
             L HP IV   +A+           S     L++ ++L  + +L   +   R       
Sbjct: 58  AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNG-RCTIEERE 116

Query: 168 ECLVWSYFRQIAAALQYVHSRRILHR 193
             +    F QIA A++++HS+ ++HR
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHR 142

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 69.7 bits (171), Expect = 1e-14
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
           GT  YMSPE++    YS   D++SLG +L+E    L  P+    ER++ L 
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFE----LLYPFSTQMERVRTLT 238

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 83.9 bits (208), Expect = 1e-19
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               H ++V   SA+A      + +  E  + G LA  I+E  +   +  E  +     Q
Sbjct: 66  VLGQHSHVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123

Query: 178 IAAALQYVHSRRILHR 193
           +   L+Y+HS  ++H 
Sbjct: 124 VGRGLRYIHSMSLVHM 139

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 77.0 bits (190), Expect = 3e-17
 Identities = 10/74 (13%), Positives = 23/74 (31%), Gaps = 8/74 (10%)

Query: 45  DSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
               G   +++ E L+E   +   +D+++L   +      +    +           I  
Sbjct: 188 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----QWHEIRQ 242

Query: 104 ALFPPLPSGVLYSD 117
              P +P     S 
Sbjct: 243 GRLPRIPQV--LSQ 254

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 80.6 bits (199), Expect = 2e-18
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+H NIV+L +     + +   L++E    G L  V+ E       L E       R 
Sbjct: 62  KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRD 120

Query: 178 IAAALQYVHSRRILHR 193
           +   + ++    I+HR
Sbjct: 121 VVGGMNHLRENGIVHR 136

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 10/78 (12%)

Query: 46  SFLGTPYYMSPE--------RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN-- 95
           S  GT  Y+ P+        +  + KY    D+WS+G   Y       PF          
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233

Query: 96  GLCKRIEMALFPPLPSGV 113
            +  +I         SGV
Sbjct: 234 EVMYKIITGKPSGAISGV 251

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 13/119 (10%)

Query: 10  SFLGTPYYMSPE--------RLKELKYSFPSDVWSLGCVLYEVDSFLGTP---YYMSPER 58
           S  GT  Y+ P+        +  + KY    D+WS+G   Y   +  G+     +  P R
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRR 231

Query: 59  LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSD 117
            KE+ Y   +   S      +        +S  + ++    R    L  P+ + +L +D
Sbjct: 232 NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD 290

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 80.3 bits (198), Expect = 5e-18
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+H NIV+L +     + +   L++E    G L  V+ E       L E       R 
Sbjct: 62  KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE-PSNAYGLPESEFLIVLRD 120

Query: 178 IAAALQYVHSRRILHR 193
           +   + ++    I+HR
Sbjct: 121 VVGGMNHLRENGIVHR 136

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.1 bits (130), Expect = 6e-09
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 8/58 (13%)

Query: 46  SFLGTPYYMSPE--------RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
           S  GT  Y+ P+        +  + KY    D+WS+G   Y       PF        
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR 231

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 13/119 (10%)

Query: 10  SFLGTPYYMSPE--------RLKELKYSFPSDVWSLGCVLYEVDSFLGTP---YYMSPER 58
           S  GT  Y+ P+        +  + KY    D+WS+G   Y   +  G+     +  P R
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT--GSLPFRPFEGPRR 231

Query: 59  LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSD 117
            KE+ Y   +   S      +        +S  + ++    R    L  P+ + +L +D
Sbjct: 232 NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD 290

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 77.4 bits (191), Expect = 3e-17
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 14/87 (16%)

Query: 118 KTLHHPNIVELRSAF-----------ASRSGQELFLVLELADQGDLALVIAECRQKKCHL 166
            +L+H  +V   +A+           A +    LF+ +E  + G L  +I     +  + 
Sbjct: 57  ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQ 113

Query: 167 AECLVWSYFRQIAAALQYVHSRRILHR 193
                W  FRQI  AL Y+HS+ I+HR
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQGIIHR 140

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 46  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           S +GT  Y++ E L     Y+   D++SLG + +EM+    PF +       + K++   
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-ERVNILKKLRSV 244

Query: 105 LFPPLP 110
                P
Sbjct: 245 SIEFPP 250

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)

Query: 10  SFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK----- 63
           S +GT  Y++ E L     Y+   D++SLG + +E    +  P+    ER+  LK     
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE----MIYPFSTGMERVNILKKLRSV 244

Query: 64  -YSFPSDVWS 72
              FP D   
Sbjct: 245 SIEFPPDFDD 254

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 76.2 bits (188), Expect = 8e-17
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HP  V L  A+    G  L+L  EL     L      C      L E  VW Y R 
Sbjct: 112 KVGQHPCCVRLEQAWEE--GGILYLQTELCG-PSLQ---QHCEAWGASLPEAQVWGYLRD 165

Query: 178 IAAALQYVHSRRILHR 193
              AL ++HS+ ++H 
Sbjct: 166 TLLALAHLHSQGLVHL 181

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 73.9 bits (182), Expect = 5e-16
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           +   G P YM+PE L+   Y   +DV+SLG  + E+                L +     
Sbjct: 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-GWQQLRQGY--- 268

Query: 105 LFPPLPSGVLYSD 117
           L P   +G   S 
Sbjct: 269 LPPEFTAG--LSS 279

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 65.0 bits (159), Expect = 7e-13
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
              + +   G P YM+PE L+   Y   +DV+SLG  + EV
Sbjct: 209 TAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEV 248

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           ++L H ++V     F       +F+VLEL  +  L  +     +++  L E     Y RQ
Sbjct: 96  RSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQ 149

Query: 178 IAAALQYVHSRRILHR 193
           I    QY+H  R++HR
Sbjct: 150 IVLGCQYLHRNRVIHR 165

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           GTP Y++PE L +  +SF  DVWS+GC++Y ++  + PF +    L     RI+   + 
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKKNEYS 259

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 12/66 (18%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------DSFLGTPYYMSPERLKELKY 64
           GTP Y++PE L +  +SF  DVWS+GC++Y +         S L   Y     R+K+ +Y
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----LRIKKNEY 258

Query: 65  SFPSDV 70
           S P  +
Sbjct: 259 SIPKHI 264

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 74.9 bits (184), Expect = 3e-16
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           GT  YMSPE++    YS   D++SLG +L+E++   S    +   +  +        FP 
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLK----FPL 293

Query: 109 LPS 111
           L +
Sbjct: 294 LFT 296

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 67.6 bits (165), Expect = 1e-13
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 24/98 (24%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL----KYSFPS 68
           GT  YMSPE++    YS   D++SLG +L+E    L   +    ER++ +       FP 
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFE----LLYSFSTQMERVRIITDVRNLKFPL 293

Query: 69  DVWSLGCVLYEMVA----------------LQSPFFSK 90
                    + MV                 +++  F  
Sbjct: 294 LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 62.6 bits (152), Expect = 6e-12
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
                   N V      + +    L++ ++L  + +L   +   R         +    F
Sbjct: 114 RMDPFSTKNTVGQLQPSSPK--VYLYIQMQLCRKENLKDWMNR-RCSLEDREHGVCLHIF 170

Query: 176 RQIAAALQYVHSRRILHR 193
            QIA A++++HS+ ++HR
Sbjct: 171 IQIAEAVEFLHSKGLMHR 188

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 74.7 bits (184), Expect = 3e-16
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 45  DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           DS +GT  YM PE +K+            K S  SDVWSLGC+LY M   ++PF      
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245

Query: 94  LNGLCKRIEMALFPPLPSGV 113
           ++ L   I+       P   
Sbjct: 246 ISKLHAIIDPNHEIEFPDIP 265

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 118 KTLHHPN--IVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
             L   +  I+ L     +   Q +++V+E  +  DL   +    +KK  +      SY+
Sbjct: 81  NKLQQHSDKIIRLYDYEITD--QYIYMVMECGN-IDLNSWL----KKKKSIDPWERKSYW 133

Query: 176 RQIAAALQYVHSRRILHR 193
           + +  A+  +H   I+H 
Sbjct: 134 KNMLEAVHTIHQHGIVHS 151

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 24/83 (28%)

Query: 9   DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEVDSFL-G-TPYYMS 55
           DS +GT  YM PE +K+            K S  SDVWSLGC+LY       G TP+   
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY---MTYGKTPFQQI 242

Query: 56  PERLKEL--------KYSFPSDV 70
             ++ +L        +  FP   
Sbjct: 243 INQISKLHAIIDPNHEIEFPDIP 265

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           ++L H ++V     F       +F+VLEL  +  L  +     +++  L E     Y RQ
Sbjct: 70  RSLAHQHVVGFHGFFEDND--FVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQ 123

Query: 178 IAAALQYVHSRRILHR 193
           I    QY+H  R++HR
Sbjct: 124 IVLGCQYLHRNRVIHR 139

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           GTP Y++PE L +  +SF  DVWS+GC++Y ++  + PF +    L     RI+   +  
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--LKETYLRIKKNEY-S 233

Query: 109 LPS 111
           +P 
Sbjct: 234 IPK 236

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 53.4 bits (129), Expect = 9e-09
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 12/66 (18%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------DSFLGTPYYMSPERLKELKY 64
           GTP Y++PE L +  +SF  DVWS+GC++Y +         S L   Y     R+K+ +Y
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----LRIKKNEY 232

Query: 65  SFPSDV 70
           S P  +
Sbjct: 233 SIPKHI 238

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 74.7 bits (184), Expect = 4e-16
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 45  DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           DS +GT  YM PE +K+            K S  SDVWSLGC+LY M   ++PF      
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226

Query: 94  LNGLCKRIEMALFPPLPSGV 113
           ++ L   I+       P   
Sbjct: 227 ISKLHAIIDPNHEIEFPDIP 246

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 63.2 bits (154), Expect = 4e-12
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 118 KTLHHPN--IVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
             L   +  I+ L       + Q +++V+E  +  DL   +    +KK  +      SY+
Sbjct: 62  NKLQQHSDKIIRLYDYE--ITDQYIYMVMECGN-IDLNSWL----KKKKSIDPWERKSYW 114

Query: 176 RQIAAALQYVHSRRILHR 193
           + +  A+  +H   I+H 
Sbjct: 115 KNMLEAVHTIHQHGIVHS 132

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 62.4 bits (152), Expect = 8e-12
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 13/56 (23%)

Query: 1   MSVKTSSV--DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYE 43
           M   T+SV  DS +GT  YM PE +K+            K S  SDVWSLGC+LY 
Sbjct: 157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 212

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 73.7 bits (182), Expect = 4e-16
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP+I+EL + F   +   ++LVLE+   G++   +   + +    +E     +  Q
Sbjct: 66  CQLKHPSILELYNYFEDSN--YVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQ 120

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+HS  ILHR
Sbjct: 121 IITGMLYLHSHGILHR 136

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 59.1 bits (144), Expect = 8e-11
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           GTP Y+SPE      +   SDVWSLGC+ Y ++  + PF +   ++     ++ +A +
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD--TVKNTLNKVVLADY 229

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 16/82 (19%)

Query: 1   MSVKTSSVDSFL----GTPYYMSPERLKELKYSFPSDVWSLGCVLYEV--------DSFL 48
           ++ +            GTP Y+SPE      +   SDVWSLGC+ Y +           +
Sbjct: 158 LATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV 217

Query: 49  GTPYYMSPERLKELKYSFPSDV 70
                    ++    Y  PS +
Sbjct: 218 KNTL----NKVVLADYEMPSFL 235

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 74.9 bits (184), Expect = 4e-16
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 11/80 (13%)

Query: 45  DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           DS +G   YM PE +K+            K S  SDVWSLGC+LY M   ++PF      
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273

Query: 94  LNGLCKRIEMALFPPLPSGV 113
           ++ L   I+       P   
Sbjct: 274 ISKLHAIIDPNHEIEFPDIP 293

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 63.7 bits (155), Expect = 4e-12
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 118 KTLHHPN--IVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
             L   +  I+ L       + Q +++V+E  +  DL   +    +KK  +      SY+
Sbjct: 109 NKLQQHSDKIIRLYDYE--ITDQYIYMVMECGN-IDLNSWL----KKKKSIDPWERKSYW 161

Query: 176 RQIAAALQYVHSRRILHR 193
           + +  A+  +H   I+H 
Sbjct: 162 KNMLEAVHTIHQHGIVHS 179

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 62.5 bits (152), Expect = 8e-12
 Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 13/56 (23%)

Query: 1   MSVKTSSV--DSFLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYE 43
           M   T+SV  DS +G   YM PE +K+            K S  SDVWSLGC+LY 
Sbjct: 204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 73.6 bits (180), Expect = 2e-15
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 118 KTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K L+HPN+V  R                L +E  + GDL   + +  +  C L E  + +
Sbjct: 67  KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ-FENCCGLKEGPIRT 125

Query: 174 YFRQIAAALQYVHSRRILHR 193
               I++AL+Y+H  RI+HR
Sbjct: 126 LLSDISSALRYLHENRIIHR 145

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 56.2 bits (135), Expect = 1e-09
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS 89
             F+GT  Y++PE L++ KY+   D WS G + +E +    PF  
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 53.9 bits (129), Expect = 8e-09
 Identities = 22/113 (19%), Positives = 37/113 (32%), Gaps = 12/113 (10%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKY 64
             F+GT  Y++PE L++ KY+   D WS G + +E  +    FL     +        K 
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKS 240

Query: 65  SFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSD 117
           +    V+       +        FS  +        I           +L   
Sbjct: 241 NEHIVVYDDLTGAVK--------FSSVLPTPNHLSGILAGKLERWLQCMLMWH 285

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 71.0 bits (174), Expect = 1e-14
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 99  KRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAE 158
           K+IE           +   + L HPN++ L+  F S + ++++L+ + A+  DL  +I  
Sbjct: 54  KQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKF 112

Query: 159 CRQKKCH-----LAECLVWSYFRQIAAALQYVHSRRILHR 193
            R  K +     L   +V S   QI   + Y+H+  +LHR
Sbjct: 113 HRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHR 152

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPN+V+L       +   L++V EL +QG +  V          L+E     YF+ 
Sbjct: 91  KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-----LSEDQARFYFQD 145

Query: 178 IAAALQYVHSRRILHR 193
           +   ++Y+H ++I+HR
Sbjct: 146 LIKGIEYLHYQKIIHR 161

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 9/69 (13%)

Query: 45  DSFL----GTPYYMSPERLKELK--YS-FPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
           D+ L    GTP +M+PE L E +  +S    DVW++G  LY  V  Q PF  + I    L
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--CL 248

Query: 98  CKRIEMALF 106
             +I+    
Sbjct: 249 HSKIKSQAL 257

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 7/41 (17%)

Query: 9   DSFL----GTPYYMSPERLKELK--YS-FPSDVWSLGCVLY 42
           D+ L    GTP +M+PE L E +  +S    DVW++G  LY
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 69.2 bits (170), Expect = 2e-14
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HPNI+ L   F   +   ++L+LE A  G +   +    QK     E    +Y  +
Sbjct: 64  SHLRHPNILRLYGYFHDAT--RVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117

Query: 178 IAAALQYVHSRRILHR 193
           +A AL Y HS+R++HR
Sbjct: 118 LANALSYCHSKRVIHR 133

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA--LF 106
           GT  Y+ PE ++   +    D+WSLG + YE +  + PF +   +     KRI      F
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRISRVEFTF 226

Query: 107 PP 108
           P 
Sbjct: 227 PD 228

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 10/65 (15%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL-GTPYYMSP------ERLKELKYS 65
           GT  Y+ PE ++   +    D+WSLG + YE   FL G P + +       +R+  ++++
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE---FLVGKPPFEANTYQETYKRISRVEFT 225

Query: 66  FPSDV 70
           FP  V
Sbjct: 226 FPDFV 230

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 67.9 bits (166), Expect = 9e-14
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +SF+GT  YMSPERL+   YS  SD+WS+G  L EM   + P 
Sbjct: 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 63.7 bits (155), Expect = 3e-12
 Identities = 21/39 (53%), Positives = 27/39 (69%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 67.2 bits (165), Expect = 9e-14
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HPNI+ + + F  R    ++L+LE A +G+L   +    QK     E    ++  +
Sbjct: 69  SHLRHPNILRMYNYFHDRK--RIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEE 122

Query: 178 IAAALQYVHSRRILHR 193
           +A AL Y H R+++HR
Sbjct: 123 LADALHYCHERKVIHR 138

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA--LF 106
           GT  Y+ PE ++   +    D+W  G + YE +    PF S   S     +RI      F
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP--SHTETHRRIVNVDLKF 231

Query: 107 PP 108
           PP
Sbjct: 232 PP 233

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 10/65 (15%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP-----ERLKELKYS 65
           GT  Y+ PE ++   +    D+W  G + YE   FL    P+          R+  +   
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE---FLVGMPPFDSPSHTETHRRIVNVDLK 230

Query: 66  FPSDV 70
           FP  +
Sbjct: 231 FPPFL 235

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNI+ L  AF  +S   + LV +  +  DL ++I +       L    + +Y   
Sbjct: 67  QELSHPNIIGLLDAFGHKSN--ISLVFDFMET-DLEVIIKDNSLV---LTPSHIKAYMLM 120

Query: 178 IAAALQYVHSRRILHR 193
               L+Y+H   ILHR
Sbjct: 121 TLQGLEYLHQHWILHR 136

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 8/81 (9%), Positives = 27/81 (33%), Gaps = 7/81 (8%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR----QKKCHLAECLVWS 173
             + +   +       +    E++++ E  +   +               C +   ++  
Sbjct: 98  TDIKNEYCLTCEGIITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155

Query: 174 YFRQIAAALQYVHSRR-ILHR 193
             + +  +  Y+H+ + I HR
Sbjct: 156 IIKSVLNSFSYIHNEKNICHR 176

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 49  GTPYYMSPERL--KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           GT  +M PE    +        D+WSLG  LY M     PF  K  SL  L   I     
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI-SLVELFNNIRTKNI 270

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 14/89 (15%)

Query: 13  GTPYYMSPERL--KELKYSFPSDVWSLGCVLYEVDSFL-G-TPYYMSP------ERLKEL 62
           GT  +M PE    +        D+WSLG  LY          P+ +          ++  
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV---MFYNVVPFSLKISLVELFNNIRTK 268

Query: 63  KYSFPSDV-WSLGCVLYEMVALQSPFFSK 90
              +P D    L  +  +     + F S 
Sbjct: 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSN 297

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 65.7 bits (161), Expect = 4e-13
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALV--IAECRQKKCHLAECLVWSYF 175
           + L H N+++L     +   Q++++V+E    G   ++  + E R        C    YF
Sbjct: 61  RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-----FPVCQAHGYF 115

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+   L+Y+HS+ I+H+
Sbjct: 116 CQLIDGLEYLHSQGIVHK 133

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 45  DSFL----GTPYYMSPERLKELK-YS-FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLC 98
           D       G+P +  PE    L  +S F  D+WS G  LY +     PF   +I    L 
Sbjct: 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--LF 222

Query: 99  KRIEMALF 106
           + I    +
Sbjct: 223 ENIGKGSY 230

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L     +     L+L++E A  G++   +         + E    S FRQ
Sbjct: 69  KILNHPNIVKLFEVIETEK--TLYLIMEYASGGEVFDYLV----AHGRMKEKEARSKFRQ 122

Query: 178 IAAALQYVHSRRILHR 193
           I +A+QY H +RI+HR
Sbjct: 123 IVSAVQYCHQKRIVHR 138

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHISLN 95
            + V   L    G P Y +PE  +  KY  P  DVWSLG +LY +V+   PF  +++   
Sbjct: 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-- 220

Query: 96  GLCKRIEMALFPPLPSGV 113
            L +R+    +  +P  +
Sbjct: 221 ELRERVLRGKY-RIPFYM 237

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 13  GTPYYMSPERLKELKYSFP-SDVWSLGCVLY 42
           G P Y +PE  +  KY  P  DVWSLG +LY
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILY 205

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 66.0 bits (161), Expect = 6e-13
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
             +GT  YM+PE +K  +Y+F  D W+LGC+LYEM+A QSPF  +
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 54.0 bits (130), Expect = 8e-09
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 31/136 (22%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYMSPERLK-------- 60
             +GT  YM+PE +K  +Y+F  D W+LGC+LYE+    G +P+    +++K        
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM--IAGQSPFQQRKKKIKREEVERLV 401

Query: 61  ---ELKY--SFPSDVWS-------------LGCVLYEMVALQS-PFFSKHISLNGLCKRI 101
                +Y   F     S             LGC       ++  P F K ++   L   +
Sbjct: 402 KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF-KKLNFKRLGAGM 460

Query: 102 EMALFPPLPSGVLYSD 117
               F P P  +   D
Sbjct: 461 LEPPFKPDPQAIYCKD 476

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + ++   +V L  A+ ++    L LVL L + GDL   I      +    E     Y  +
Sbjct: 239 EKVNSRFVVSLAYAYETKD--ALCLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAE 294

Query: 178 IAAALQYVHSRRILHR 193
           I   L+ +H  RI++R
Sbjct: 295 ICCGLEDLHRERIVYR 310

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 66.0 bits (161), Expect = 7e-13
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            + GTP +M+PE L   +Y F  D ++LG  LYEM+A + PF ++
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 31/136 (22%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYMSPERLK-------- 60
            + GTP +M+PE L   +Y F  D ++LG  LYE+       P+    E+++        
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM--IAARGPFRARGEKVENKELKQRV 405

Query: 61  ---ELKY--SFPSDVWS-------------LGCVLYEMVALQS-PFFSKHISLNGLCKRI 101
               + Y   F                   LG        L++ P F + IS   L   +
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF-RDISWRQLEAGM 464

Query: 102 EMALFPPLPSGVLYSD 117
               F P    V   +
Sbjct: 465 LTPPFVPDSRTVYAKN 480

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             +H   IV L  AF +++  +L LV+ + + GD+   I    +      E     Y  Q
Sbjct: 240 AKVHSRFIVSLAYAFETKT--DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297

Query: 178 IAAALQYVHSRRILHR 193
           I + L+++H R I++R
Sbjct: 298 IVSGLEHLHQRNIIYR 313

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 65.2 bits (159), Expect = 1e-12
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP +V L  AF   +  E+ ++ E    G+L   +A+   +   ++E     Y RQ
Sbjct: 209 SVLRHPTLVNLHDAFEDDN--EMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQ 263

Query: 178 IAAALQYVHSRRILHR 193
           +   L ++H    +H 
Sbjct: 264 VCKGLCHMHENNYVHL 279

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 12/40 (30%), Positives = 23/40 (57%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            GT  + +PE  +     + +D+WS+G + Y +++  SPF
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 51.8 bits (124), Expect = 4e-08
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFP 67
            GT  + +PE  +     + +D+WS+G + Y + S    F G     +   +K   ++  
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376

Query: 68  SDVWS 72
              +S
Sbjct: 377 DSAFS 381

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K LHHPNIV L     S     L LV E  ++ DL  V+    + K  L +  +  Y  Q
Sbjct: 74  KELHHPNIVSLIDVIHSER--CLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQ 127

Query: 178 IAAALQYVHSRRILHR 193
           +   + + H  RILHR
Sbjct: 128 LLRGVAHCHQHRILHR 143

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 64.1 bits (157), Expect = 1e-12
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L     + +  +L+LV E   Q DL   +         +   L+ SY  Q
Sbjct: 57  KELNHPNIVKLLDVIHTEN--KLYLVFEFLHQ-DLKKFMDASALT--GIPLPLIKSYLFQ 111

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS R+LHR
Sbjct: 112 LLQGLAFCHSHRVLHR 127

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 63.8 bits (156), Expect = 1e-12
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HP+I++L    ++ +  + F+V+E    G+L   I     K   + E      F+Q
Sbjct: 66  KLFRHPHIIKLYQVISTPT--DFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQ 119

Query: 178 IAAALQYVHSRRILHR 193
           I +A+ Y H   ++HR
Sbjct: 120 ILSAVDYCHRHMVVHR 135

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHISLN 95
           +     FL    G+P Y +PE +    Y+ P  D+WS G +LY ++    PF  +H+   
Sbjct: 160 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT- 218

Query: 96  GLCKRIEMALF 106
            L K+I   +F
Sbjct: 219 -LFKKIRGGVF 228

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 9   DSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLY 42
             FL    G+P Y +PE +    Y+ P  D+WS G +LY
Sbjct: 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HP I+++++ F +      ++VLEL + G+L   +         L E     YF Q
Sbjct: 195 KKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQ 247

Query: 178 IAAALQYVHSRRILHR 193
           +  A+QY+H   I+HR
Sbjct: 248 MLLAVQYLHENGIIHR 263

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 16/73 (21%)

Query: 11  FLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFL--GTP---YYMSPERLKEL 62
             GTP Y++PE L  +    Y+   D WSLG +L+        G P    + +   LK+ 
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF----ICLSGYPPFSEHRTQVSLKDQ 356

Query: 63  ----KYSFPSDVW 71
               KY+F  +VW
Sbjct: 357 ITSGKYNFIPEVW 369

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 50.8 bits (122), Expect = 7e-08
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 47  FLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
             GTP Y++PE L  +    Y+   D WSLG +L+  ++   PF         L  +I  
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITS 359

Query: 104 AL--FPPLP 110
               F P  
Sbjct: 360 GKYNFIPEV 368

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           SF+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF + 
Sbjct: 191 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 235

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           SF+GT  Y+SPE L E      SD+W+LGC++Y+
Sbjct: 191 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQ 224

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP  V+L   F  +  ++L+  L  A  G+L   I    +K     E     Y  +
Sbjct: 85  SRLDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAE 138

Query: 178 IAAALQYVHSRRILHR 193
           I +AL+Y+H + I+HR
Sbjct: 139 IVSALEYLHGKGIIHR 154

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L HPNI+++   F       +++V+E  + G+L   I   + +   L+E  V    +Q
Sbjct: 75  KSLDHPNIIKIFEVFEDY--HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132

Query: 178 IAAALQYVHSRRILHR 193
           +  AL Y HS+ ++H+
Sbjct: 133 MMNALAYFHSQHVVHK 148

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.4 bits (129), Expect = 8e-09
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +  GT  YM+PE  K    +F  D+WS G V+Y ++    PF     SL  + ++     
Sbjct: 185 NAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGT--SLEEVQQKATYKE 241

Query: 106 --FPPLPSGV 113
             +      +
Sbjct: 242 PNYAVECRPL 251

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 21/76 (27%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------E 57
           +  GT  YM+PE  K    +F  D+WS G V+Y    FL  G      P          +
Sbjct: 185 NAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMY----FLLTGCL----PFTGTSLEEVQQ 235

Query: 58  RLKELKYSFPSDVWSL 73
           +    + ++  +   L
Sbjct: 236 KATYKEPNYAVECRPL 251

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 64.1 bits (157), Expect = 2e-12
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV+L     ++    L LV E  DQ DL  ++      +  L      S+  Q
Sbjct: 55  KELKHSNIVKLYDVIHTKK--RLVLVFEHLDQ-DLKKLL---DVCEGGLESVTAKSFLLQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   + Y H RR+LHR
Sbjct: 109 LLNGIAYCHDRRVLHR 124

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L H N+++L  AF S++  ++ LV+E  D G+L   I +   +  +L E     + +Q
Sbjct: 141 NQLDHANLIQLYDAFESKN--DIVLVMEYVDGGELFDRIID---ESYNLTELDTILFMKQ 195

Query: 178 IAAALQYVHSRRILHR 193
           I   ++++H   ILH 
Sbjct: 196 ICEGIRHMHQMYILHL 211

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 16/39 (41%), Positives = 27/39 (69%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP +++PE +     SFP+D+WS+G + Y +++  SPF
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFPS 68
           GTP +++PE +     SFP+D+WS+G + Y + S    FLG     +   +   ++    
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309

Query: 69  DVWS 72
           + + 
Sbjct: 310 EEFQ 313

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV L     S     L LV E  DQ DL             L   +V S+  Q
Sbjct: 56  KELKHKNIVRLHDVLHSDKK--LTLVFEFCDQ-DLKKYF---DSCNGDLDPEIVKSFLFQ 109

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HSR +LHR
Sbjct: 110 LLKGLGFCHSRNVLHR 125

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 50  TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y  P+ L     YS   D+WS GC+  E+     P F
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQE----LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           + + HPN+V+L++ F S   ++    L LVLE   +  +        + K  +   L+  
Sbjct: 87  RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKL 145

Query: 174 YFRQIAAALQYVHSRRILHR 193
           Y  Q+  +L Y+HS  I HR
Sbjct: 146 YMYQLLRSLAYIHSIGICHR 165

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           + YY +PE       Y+   D+WS GCV+ E++  Q P F
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ-PLF 242

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 63.7 bits (156), Expect = 2e-12
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPN+V L   F  R  + L LV E  D   +   +   ++    + E LV S   Q
Sbjct: 57  KQLKHPNLVNLLEVF--RRKRRLHLVFEYCDH-TVLHELDRYQR---GVPEHLVKSITWQ 110

Query: 178 IAAALQYVHSRRILHR 193
              A+ + H    +HR
Sbjct: 111 TLQAVNFCHKHNCIHR 126

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 39.1 bits (92), Expect = 5e-04
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 53  YMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           Y SPE L  + +Y  P DVW++GCV  E+++   P +
Sbjct: 168 YRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV-PLW 203

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 63.8 bits (156), Expect = 2e-12
 Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + H N++ L   + +R+  ++ L+LEL   G+L   +A+    K  L+E    S+ +Q
Sbjct: 70  RQVLHHNVITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+H+++I H 
Sbjct: 124 ILDGVNYLHTKKIAHF 139

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 12/68 (17%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP------ERLKELKY 64
           GTP +++PE +        +D+WS+G + Y     L  G   ++          +  + Y
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITY----ILLSGASPFLGDTKQETLANITSVSY 235

Query: 65  SFPSDVWS 72
            F  + +S
Sbjct: 236 DFDEEFFS 243

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 13/39 (33%), Positives = 24/39 (61%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GTP +++PE +        +D+WS+G + Y +++  SPF
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQG-DLALVIAECRQKKCHLAECLVWSYFR 176
             + H NI+++   F ++      LV+E    G DL   I     +   L E L    FR
Sbjct: 84  SRVEHANIIKVLDIFENQG--FFQLVMEKHGSGLDLFAFID----RHPRLDEPLASYIFR 137

Query: 177 QIAAALQYVHSRRILHR 193
           Q+ +A+ Y+  + I+HR
Sbjct: 138 QLVSAVGYLRLKDIIHR 154

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 47.4 bits (113), Expect = 9e-07
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPF 87
             E         GT  Y +PE L    Y  P  ++WSLG  LY +V  ++PF
Sbjct: 179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 15/64 (23%)

Query: 9   DSFLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYE--------------VDSFLGTPYY 53
            +F GT  Y +PE L    Y  P  ++WSLG  LY               V++ +  PY 
Sbjct: 187 YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYL 246

Query: 54  MSPE 57
           +S E
Sbjct: 247 VSKE 250

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 45  DSFLGTPYYMSPERLKELK-----YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           D   G   YM+PER+         Y   +DVWSLG  L E+   Q P+ +       +  
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VLT 240

Query: 100 RIEMALFPPLPSGVLYSD 117
           ++     P LP  + +S 
Sbjct: 241 KVLQEEPPLLPGHMGFSG 258

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 121 HHPNIVELRSAFA-----SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
            HPNIV+  SA +     S +GQ  FL+L    +G L   + +   +   L+   V   F
Sbjct: 84  GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSCDTVLKIF 142

Query: 176 RQIAAALQYVHSRR--ILHR 193
            Q   A+Q++H ++  I+HR
Sbjct: 143 YQTCRAVQHMHRQKPPIIHR 162

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 49  GTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            TP Y +PE              D+W+LGC+LY +   Q PF
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 55.1 bits (133), Expect = 2e-09
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 13  GTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKELKYSFPS 68
            TP Y +PE              D+W+LGC+LY +  F   P+   +  R+   KYS P 
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLL-CFRQHPFEDGAKLRIVNGKYSIPP 270

Query: 69  D 69
            
Sbjct: 271 H 271

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           D   GT  +M+PE +         D+WS  C++  M+    P+    
Sbjct: 214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +     + D   GT  +M+PE +         D+WS  C++  
Sbjct: 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 57.1 bits (138), Expect = 5e-10
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L  P IV L  A   R G  + + +EL + G L  +I +       L E     Y  Q
Sbjct: 105 AGLSSPRIVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMG----CLPEDRALYYLGQ 158

Query: 178 IAAALQYVHSRRILHR 193
               L+Y+H+RRILH 
Sbjct: 159 ALEGLEYLHTRRILHG 174

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 63.3 bits (155), Expect = 3e-12
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           SF GT  YM+PE +    ++  +D WS G +++EM+    PF  K
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           SF GT  YM+PE +    ++  +D WS G +++E
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE 218

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             ++HP IV+L  AF  ++  +L+L+L+    GDL   +     K+    E  V  Y  +
Sbjct: 81  VEVNHPFIVKLHYAF--QTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE 134

Query: 178 IAAALQYVHSRRILHR 193
           +A AL ++HS  I++R
Sbjct: 135 LALALDHLHSLGIIYR 150

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 63.8 bits (155), Expect = 3e-12
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH-LAECLVWSYFR 176
           K       ++  SA   +      LV EL   G L   I   +      + + LV S+  
Sbjct: 122 KPSMQHMFMKFYSAHLFQ--NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 177 QIAAALQYVHSRRILHR 193
           ++   ++ VH   I+H 
Sbjct: 180 RMLYMIEQVHDCEIIHG 196

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 56.1 bits (135), Expect = 1e-09
 Identities = 6/46 (13%), Positives = 15/46 (32%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +   T  +   E L    +++  D + +   +Y M+          
Sbjct: 244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 50.7 bits (121), Expect = 7e-08
 Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE-----LKY 64
           +   T  +   E L    +++  D + +   +Y +    GT   +  E  +       + 
Sbjct: 244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCM--LFGTYMKVKNEGGECKPEGLFRR 301

Query: 65  SFPSDVWS 72
               D+W+
Sbjct: 302 LPHLDMWN 309

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HPNI+ L   + +R+  ++ L+LEL   G+L   +A+    K  L+E    S+ +Q
Sbjct: 70  RQVLHPNIITLHDVYENRT--DVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQ 123

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+H+++I H 
Sbjct: 124 ILDGVNYLHTKKIAHF 139

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP------ERLKEL 62
             GTP +++PE +        +D+WS+G + Y     L  G   ++          +  +
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY----ILLSGASPFLGDTKQETLANITAV 233

Query: 63  KYSFPSDVWS 72
            Y F  + +S
Sbjct: 234 SYDFDEEFFS 243

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
             GTP +++PE +        +D+WS+G + Y +++  SPF
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H N+V L      +  +  +LV E  D   +   +         L   +V  Y  Q
Sbjct: 79  KQLRHENLVNLLEVC--KKKKRWYLVFEFVDH-TILDDLELFPN---GLDYQVVQKYLFQ 132

Query: 178 IAAALQYVHSRRILHR 193
           I   + + HS  I+HR
Sbjct: 133 IINGIGFCHSHNIIHR 148

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 53  YMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           Y +PE L  ++KY    DVW++GC++ EM   + P F
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE-PLF 225

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 63.0 bits (154), Expect = 4e-12
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 5/78 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKC--HLAECLVWSYF 175
           K L H NIV L     + +  +L LV E  D  DL   +           L   LV  + 
Sbjct: 58  KELKHENIVRLYDVIHTEN--KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+   L + H  +ILHR
Sbjct: 115 WQLLQGLAFCHENKILHR 132

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 53  YMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           Y +P+ L     YS   D+WS GC+L EM+    P F
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMI-TGKPLF 209

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               H NI+ L  +F S    EL ++ E     D+   I         L E  + SY  Q
Sbjct: 56  NIARHRNILHLHESFESME--ELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQ 110

Query: 178 IAAALQYVHSRRILHR 193
           +  ALQ++HS  I H 
Sbjct: 111 VCEALQFLHSHNIGHF 126

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
             P Y +PE  +    S  +D+WSLG ++Y +++  +PF
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 20/72 (27%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------ERLK 60
             P Y +PE  +    S  +D+WSLG ++Y     L  G      P          E + 
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVY----VLLSGIN----PFLAETNQQIIENIM 216

Query: 61  ELKYSFPSDVWS 72
             +Y+F  + + 
Sbjct: 217 NAEYTFDEEAFK 228

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV L     +     L LV E  D+ DL   + +C      +    V  +  Q
Sbjct: 55  KDLKHANIVTLHDIIHTEKS--LTLVFEYLDK-DLKQYLDDCGN---IINMHNVKLFLFQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   L Y H +++LHR
Sbjct: 109 LLRGLAYCHRQKVLHR 124

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   + +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 69  KEIQHPNVITLHEVYENKT--DVILILELVAGGELFDFLAE----KESLTEEEATEFLKQ 122

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+HS +I H 
Sbjct: 123 ILNGVYYLHSLQIAHF 138

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP------ERLKEL 62
             GTP +++PE +        +D+WS+G + Y     L  G   ++          +  +
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY----ILLSGASPFLGDTKQETLANVSAV 232

Query: 63  KYSFPSDVWS 72
            Y F  + +S
Sbjct: 233 NYEFEDEYFS 242

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 13/41 (31%), Positives = 24/41 (58%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
             GTP +++PE +        +D+WS+G + Y +++  SPF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HPNI+ L   F +++  ++ L+LEL   G+L   +AE    K  L E     + +Q
Sbjct: 63  REIRHPNIITLHDIFENKT--DVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQ 116

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+HS+RI H 
Sbjct: 117 ILDGVHYLHSKRIAHF 132

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 20/74 (27%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------ER 58
             GTP +++PE +        +D+WS+G + Y     L  G      P            
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY----ILLSGAS----PFLGETKQETLTN 222

Query: 59  LKELKYSFPSDVWS 72
           +  + Y F  + +S
Sbjct: 223 ISAVNYDFDEEYFS 236

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
             GTP +++PE +        +D+WS+G + Y +++  SPF 
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 62.8 bits (153), Expect = 5e-12
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           ++L HPNIV  +    + +   L +++E A  G+L   I          +E     +F+Q
Sbjct: 71  RSLRHPNIVRFKEVILTPT--HLAIIMEYASGGELYERIC----NAGRFSEDEARFFFQQ 124

Query: 178 IAAALQYVHSRRILHR 193
           + + + Y HS +I HR
Sbjct: 125 LLSGVSYCHSMQICHR 140

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 14/86 (16%)

Query: 4   KTSSVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEV--------DSFLGT 50
           K+S + S      GTP Y++PE L   +Y    +DVWS G  LY +        D     
Sbjct: 166 KSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR 225

Query: 51  PYYMSPERLKELKYSFPSDVW-SLGC 75
            Y  + +R+  +KYS P D+  S  C
Sbjct: 226 DYRKTIQRILSVKYSIPDDIRISPEC 251

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHISLN 95
              + S      GTP Y++PE L   +Y    +DVWS G  LY M+    PF       +
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226

Query: 96  --GLCKRIEMALFPPLPSGVLYSD 117
                +RI    +  +P  +  S 
Sbjct: 227 YRKTIQRILSVKY-SIPDDIRISP 249

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP+IVEL   ++S     L++V E  D  DL   I +        +E +   Y RQ
Sbjct: 81  HMLKHPHIVELLETYSSDG--MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138

Query: 178 IAAALQYVHSRRILHR 193
           I  AL+Y H   I+HR
Sbjct: 139 ILEALRYCHDNNIIHR 154

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 59.6 bits (145), Expect = 8e-11
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 11/69 (15%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--G-TPYYMSPERL----KELK 63
            +GTP++M+PE +K   Y  P DVW  G +L+     L  G  P+Y + ERL     + K
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILF----ILLSGCLPFYGTKERLFEGIIKGK 248

Query: 64  YSFPSDVWS 72
           Y      WS
Sbjct: 249 YKMNPRQWS 257

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLY 78
            +GTP++M+PE +K   Y  P DVW  G +L+
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 62.8 bits (153), Expect = 5e-12
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             LHHP ++ L  AF  +   E+ L+LE    G+L   IA    +   ++E  V +Y RQ
Sbjct: 103 NQLHHPKLINLHDAFEDKY--EMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQ 157

Query: 178 IAAALQYVHSRRILHR 193
               L+++H   I+H 
Sbjct: 158 ACEGLKHMHEHSIVHL 173

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFPS 68
            T  + +PE +      F +D+W++G + Y + S    F G     + + +K   + F  
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271

Query: 69  DVWS 72
           D +S
Sbjct: 272 DAFS 275

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            T  + +PE +      F +D+W++G + Y +++  SPF
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 62.8 bits (153), Expect = 6e-12
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQE----LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           + L H NIV LR  F S   ++    L LVL+   +  +  V     + K  L    V  
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKL 160

Query: 174 YFRQIAAALQYVHSRRILHR 193
           Y  Q+  +L Y+HS  I HR
Sbjct: 161 YMYQLFRSLAYIHSFGICHR 180

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 52  YYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           YY +PE       Y+   DVWS GCVL E++  Q P F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIF 257

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 62.7 bits (153), Expect = 7e-12
 Identities = 21/45 (46%), Positives = 28/45 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L +  Y    D W LG VLYEM+    PF+S+
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L +  Y    D W LG VLYE
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HP +V L  +F +    +L+ VL+  + G+L   +    Q++    E     Y  +
Sbjct: 94  KNVKHPFLVGLHFSFQTAD--KLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAE 147

Query: 178 IAAALQYVHSRRILHR 193
           IA+AL Y+HS  I++R
Sbjct: 148 IASALGYLHSLNIVYR 163

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 62.9 bits (153), Expect = 7e-12
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HP+I++L    ++ S  ++F+V+E    G+L   I     K   L E      F+Q
Sbjct: 71  KLFRHPHIIKLYQVISTPS--DIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQ 124

Query: 178 IAAALQYVHSRRILHR 193
           I + + Y H   ++HR
Sbjct: 125 ILSGVDYCHRHMVVHR 140

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHISLN 95
           +     FL    G+P Y +PE +    Y+ P  D+WS G +LY ++    PF   H+   
Sbjct: 165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT- 223

Query: 96  GLCKRIEMALF 106
            L K+I   +F
Sbjct: 224 -LFKKICDGIF 233

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 9   DSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLY 42
             FL    G+P Y +PE +    Y+ P  D+WS G +LY
Sbjct: 169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILY 207

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 62.2 bits (152), Expect = 7e-12
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GT  YM+PE L    ++   D WSLG ++Y+M+    PF  +
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 49.8 bits (120), Expect = 1e-07
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GT  YM+PE L    ++   D WSLG ++Y+
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 41.8 bits (99), Expect = 6e-05
 Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + + HP IV+L  AF  ++G +L+L+LE    G+L + +    +++    E     Y  +
Sbjct: 76  EEVKHPFIVDLIYAF--QTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAE 129

Query: 178 IAAALQYVHSRRILHR 193
           I+ AL ++H + I++R
Sbjct: 130 ISMALGHLHQKGIIYR 145

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 62.2 bits (152), Expect = 8e-12
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L   KY+   D WS G +LYEM+  QSPF  +
Sbjct: 177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L   KY+   D WS G +LYE
Sbjct: 177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               HP +  +   F ++    LF V+E  + GDL   I    Q            Y  +
Sbjct: 73  LAWEHPFLTHMFCTFQTKE--NLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 126

Query: 178 IAAALQYVHSRRILHR 193
           I   LQ++HS+ I++R
Sbjct: 127 IILGLQFLHSKGIVYR 142

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 61.9 bits (151), Expect = 8e-12
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFS-KHISLNGLCK 99
           D   G   YM+PER+     +  YS  SD+WSLG  + E+  L+ P+ S          K
Sbjct: 167 DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQLK 224

Query: 100 RIEMALFPPLPSG 112
           ++     P LP+ 
Sbjct: 225 QVVEEPSPQLPAD 237

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 3   VKTSSVDSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEV 44
           V   + D   G   YM+PER+     +  YS  SD+WSLG  + E+
Sbjct: 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.0 bits (151), Expect = 8e-12
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + +GTP +M+PE  +E KY    DV++ G  + EM   + P+
Sbjct: 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPY 229

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 118 KTLHHPNIVELRSAF--ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           K L HPNIV    ++    +  + + LV EL   G L        ++   +   ++ S+ 
Sbjct: 80  KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLK----TYLKRFKVMKIKVLRSWC 135

Query: 176 RQIAAALQYVHSRR--ILHR 193
           RQI   LQ++H+R   I+HR
Sbjct: 136 RQILKGLQFLHTRTPPIIHR 155

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
            + S   + +GTP +M+PE  +E KY    DV++ G  + E
Sbjct: 182 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLE 221

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NI+EL+S         L L+ E A+  DL   + +       ++  ++ S+  Q
Sbjct: 88  KELQHRNIIELKSVIHHNH--RLHLIFEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQ 140

Query: 178 IAAALQYVHSRRILHR 193
           +   + + HSRR LHR
Sbjct: 141 LINGVNFCHSRRCLHR 156

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 38.4 bits (90), Expect = 9e-04
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T +Y  PE L     YS   D+WS+ C+  EM+ +++P F
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML-MKTPLF 238

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           +T  HPN+V L              L LV E  DQ DL   + +  +    +    +   
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEP--GVPTETIKDM 125

Query: 175 FRQIAAALQYVHSRRILHR 193
             Q+   L ++HS R++HR
Sbjct: 126 MFQLLRGLDFLHSHRVVHR 144

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 41.4 bits (98), Expect = 9e-05
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           Y +PE L +  Y+ P D+WS+GC+  EM   + P F
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLF 219

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV L  + +       +L+ +L   G+L   I      + + +E       +Q
Sbjct: 65  RLLKHPNIVRLHDSISEEG--HHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQ 118

Query: 178 IAAALQYVHSRRILHR 193
           I  A+ + H   ++HR
Sbjct: 119 ILEAVLHCHQMGVVHR 134

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 12/70 (17%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERL----KEL 62
           F GTP Y+SPE L++  Y  P D+W+ G +LY     L  G P  +     RL    K  
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILY----ILLVGYPPFWDEDQHRLYQQIKAG 228

Query: 63  KYSFPSDVWS 72
            Y FPS  W 
Sbjct: 229 AYDFPSPEWD 238

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 53.5 bits (129), Expect = 9e-09
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLY 78
           F GTP Y+SPE L++  Y  P D+W+ G +LY
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 204

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 61.6 bits (150), Expect = 1e-11
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV L  +    S    +LV +L   G+L   I      +   +E       +Q
Sbjct: 83  RKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQ 136

Query: 178 IAAALQYVHSRRILHR 193
           I  ++ Y HS  I+HR
Sbjct: 137 ILESIAYCHSNGIVHR 152

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 12/70 (17%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERL----KEL 62
           F GTP Y+SPE LK+  YS P D+W+ G +LY     L  G P  +     RL    K  
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY----ILLVGYPPFWDEDQHRLYAQIKAG 245

Query: 63  KYSFPSDVWS 72
            Y +PS  W 
Sbjct: 246 AYDYPSPEWD 255

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLY 78
           F GTP Y+SPE LK+  YS P D+W+ G +LY
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+H N+V+        +    +L LE    G+L   I         + E     +F Q
Sbjct: 60  KMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQ 113

Query: 178 IAAALQYVHSRRILHR 193
           + A + Y+H   I HR
Sbjct: 114 LMAGVVYLHGIGITHR 129

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 49  GTPYYMSPERLKELKYS-FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           GT  Y++PE LK  ++   P DVWS G VL  M+A + P+     S        E   + 
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228

Query: 108 P 108
            
Sbjct: 229 N 229

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 13  GTPYYMSPERLKELKYS-FPSDVWSLGCVLY 42
           GT  Y++PE LK  ++   P DVWS G VL 
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 46  SFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +F GT  YM+PE        Y   +D+WSLGC + EM   + PF
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 5   TSSVDSFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYE 43
               ++F GT  YM+PE        Y   +D+WSLGC + E
Sbjct: 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV+   +F       + + +E    G L+ ++   +       E  +  Y +Q
Sbjct: 74  KHLKHKNIVQYLGSF--SENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQ 130

Query: 178 IAAALQYVHSRRILHR 193
           I   L+Y+H  +I+HR
Sbjct: 131 ILEGLKYLHDNQIVHR 146

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL--ALVIAECRQKKCHLAECLVWSYF 175
           K L+HP I+++++ F +      ++VLEL + G+L   +V          L E     YF
Sbjct: 70  KKLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVV------GNKRLKEATCKLYF 120

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+  A+QY+H   I+HR
Sbjct: 121 YQMLLAVQYLHENGIIHR 138

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 24/77 (31%)

Query: 11  FLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP--------- 56
             GTP Y++PE L  +    Y+   D WSLG +L+        G P    P         
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF----ICLSGYP----PFSEHRTQVS 227

Query: 57  --ERLKELKYSFPSDVW 71
             +++   KY+F  +VW
Sbjct: 228 LKDQITSGKYNFIPEVW 244

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 47  FLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM 103
             GTP Y++PE L  +    Y+   D WSLG +L+  ++   PF         L  +I  
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITS 234

Query: 104 ALF 106
             +
Sbjct: 235 GKY 237

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L++  Y    D W LG V+YE
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HP +  L+ +F +     L  V+E A+ G+L   +     ++   +E     Y  +
Sbjct: 203 QNSRHPFLTALKYSFQTHD--RLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAE 256

Query: 178 IAAALQYVHSRR-ILHR 193
           I +AL Y+HS + +++R
Sbjct: 257 IVSALDYLHSEKNVVYR 273

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 61.0 bits (149), Expect = 2e-11
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           +   HPN+V L    A+        + LV E  DQ DL   + +       L    +   
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP--GLPAETIKDL 125

Query: 175 FRQIAAALQYVHSRRILHR 193
            RQ    L ++H+  I+HR
Sbjct: 126 MRQFLRGLDFLHANCIVHR 144

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 53  YMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           Y +PE L +  Y+ P D+WS+GC+  EM   + P F
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPLF 219

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+H N+V+        +    +L LE    G+L   I         + E     +F Q
Sbjct: 60  KMLNHENVVKFYGHRREGN--IQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQ 113

Query: 178 IAAALQYVHSRRILHR 193
           + A + Y+H   I HR
Sbjct: 114 LMAGVVYLHGIGITHR 129

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 49  GTPYYMSPERLKELKYS-FPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           GT  Y++PE LK  ++   P DVWS G VL  M+A + P+     S        E   + 
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228

Query: 108 P 108
            
Sbjct: 229 N 229

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 13  GTPYYMSPERLKELKYS-FPSDVWSLGCVLY 42
           GT  Y++PE LK  ++   P DVWS G VL 
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
           +F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF     S N
Sbjct: 169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L+   Y F  D W+LG +++E
Sbjct: 169 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 202

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +  +HP +V L S F + S   LF V+E  + GDL   +    Q++  L E     Y  +
Sbjct: 65  QASNHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAE 118

Query: 178 IAAALQYVHSRRILHR 193
           I+ AL Y+H R I++R
Sbjct: 119 ISLALNYLHERGIIYR 134

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 10/82 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQE------LFLVLELADQGDLALVIAECRQKKCHLAECLV 171
           + L H N+V L     +++         ++LV +  +  DLA +++    K        +
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK---FTLSEI 126

Query: 172 WSYFRQIAAALQYVHSRRILHR 193
               + +   L Y+H  +ILHR
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHR 148

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + H NIV L   + S +    +LV++L   G+L   I E    +    E       +Q
Sbjct: 61  KKIKHENIVTLEDIYESTT--HYYLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQ 114

Query: 178 IAAALQYVHSRRILHR 193
           + +A++Y+H   I+HR
Sbjct: 115 VLSAVKYLHENGIVHR 130

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 12/68 (17%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERLKEL----KY 64
           GTP Y++PE L +  YS   D WS+G + Y     L  G P  Y  +  +L E      Y
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITY----ILLCGYPPFYEETESKLFEKIKEGYY 224

Query: 65  SFPSDVWS 72
            F S  W 
Sbjct: 225 EFESPFWD 232

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 54.1 bits (131), Expect = 5e-09
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           GTP Y++PE L +  YS   D WS+G + Y ++    PF+ +  + + L ++I+   +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYY 224

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 61.2 bits (148), Expect = 2e-11
 Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 2/64 (3%)

Query: 49  GTPYYMSPERL--KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
               Y   E L      ++   + W LG  +Y +  L  PF      + G  KR  + + 
Sbjct: 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVP 312

Query: 107 PPLP 110
               
Sbjct: 313 GTDS 316

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 10/79 (12%), Positives = 23/79 (29%), Gaps = 4/79 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---QKKCHLAECLVWSY 174
                P   +L       +     L++  A   DL L+ +        +       +   
Sbjct: 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAA-SVDLELLFSTLDFVYVFRGDEGILALHIL 199

Query: 175 FRQIAAALQYVHSRRILHR 193
             Q+      + S+ ++H 
Sbjct: 200 TAQLIRLAANLQSKGLVHG 218

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 7/33 (21%), Positives = 11/33 (33%), Gaps = 2/33 (6%)

Query: 13  GTPYYMSPERL--KELKYSFPSDVWSLGCVLYE 43
               Y   E L      ++   + W LG  +Y 
Sbjct: 253 VPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDL-ALVIAECRQKKCHLAECLVWSYFRQIA 179
             P ++ L   + + S  E+ L+LE A  G++ +L + E  +    ++E  V    +QI 
Sbjct: 87  SCPRVINLHEVYENTS--EIILILEYAAGGEIFSLCLPELAE---MVSENDVIRLIKQIL 141

Query: 180 AALQYVHSRRILHR 193
             + Y+H   I+H 
Sbjct: 142 EGVYYLHQNNIVHL 155

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 20/74 (27%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------ER 58
            +GTP Y++PE L     +  +D+W++G + Y     L   T     P            
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAY----MLLTHTS----PFVGEDNQETYLN 244

Query: 59  LKELKYSFPSDVWS 72
           + ++   +  + +S
Sbjct: 245 ISQVNVDYSEETFS 258

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            +GTP Y++PE L     +  +D+W++G + Y ++   SPF
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV L  +    S    +LV +L   G+L   I      +   +E       +Q
Sbjct: 60  RKLQHPNIVRLHDSIQEES--FHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQ 113

Query: 178 IAAALQYVHSRRILHR 193
           I  ++ Y HS  I+HR
Sbjct: 114 ILESIAYCHSNGIVHR 129

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 56.8 bits (138), Expect = 5e-10
 Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 12/70 (17%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERL----KEL 62
           F GTP Y+SPE LK+  YS P D+W+ G +LY     L  G P  +     RL    K  
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY----ILLVGYPPFWDEDQHRLYAQIKAG 222

Query: 63  KYSFPSDVWS 72
            Y +PS  W 
Sbjct: 223 AYDYPSPEWD 232

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 18/32 (56%), Positives = 23/32 (71%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLY 78
           F GTP Y+SPE LK+  YS P D+W+ G +LY
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 198

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN 95
           +F GTP Y++PE L+   Y F  D W+LG +++EM+A +SPF     S N
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L+   Y F  D W+LG +++E
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +  +HP +V L S F + S   LF V+E  + GDL   +    Q++  L E     Y  +
Sbjct: 108 QASNHPFLVGLHSCFQTES--RLFFVIEYVNGGDLMFHM----QRQRKLPEEHARFYSAE 161

Query: 178 IAAALQYVHSRRILHR 193
           I+ AL Y+H R I++R
Sbjct: 162 ISLALNYLHERGIIYR 177

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 19/45 (42%), Positives = 31/45 (68%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L+E+ Y    D W++G +LYEM+   +PF ++
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L+E+ Y    D W++G +LYE
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
              +HP + +L   F +     LF V+E  + GDL   I    QK     E     Y  +
Sbjct: 79  LARNHPFLTQLFCCFQTPD--RLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAE 132

Query: 178 IAAALQYVHSRRILHR 193
           I +AL ++H + I++R
Sbjct: 133 IISALMFLHDKGIIYR 148

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 60.9 bits (148), Expect = 3e-11
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L HPNI++L   F  +  +  +LV E  + G+L   I      +    EC   +  +Q
Sbjct: 101 KSLDHPNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQI----INRHKFDECDAANIMKQ 154

Query: 178 IAAALQYVHSRRILHR 193
           I + + Y+H   I+HR
Sbjct: 155 ILSGICYLHKHNIVHR 170

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 57.4 bits (139), Expect = 4e-10
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
             LGT YY++PE LK+ KY+   DVWS G ++Y ++    PF  +  +   + K++
Sbjct: 207 DRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ--NDQDIIKKV 259

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 21/75 (28%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------E 57
             LGT YY++PE LK+ KY+   DVWS G ++Y     L  G P    P          +
Sbjct: 207 DRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMY----ILLCGYP----PFGGQNDQDIIK 257

Query: 58  RLKELKYSFPSDVWS 72
           ++++ KY F  + W 
Sbjct: 258 KVEKGKYYFDFNDWK 272

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE L++  Y    D W LG V+YEM+  + PF+++
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE L++  Y    D W LG V+YE
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HP +  L+ AF +     L  V+E A+ G+L   +     ++    E     Y  +
Sbjct: 60  QNTRHPFLTALKYAFQTHD--RLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113

Query: 178 IAAALQYVHSRRILHR 193
           I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 60.4 bits (147), Expect = 3e-11
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 47  FLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
             G   YM+PER+        Y   SDVWSLG  LYE+   + P+   +
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 3   VKTSSVDSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEV 44
           V + +     G   YM+PER+        Y   SDVWSLG  LYE+
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE +    Y    D W+ G +LYEM+A Q+PF  +
Sbjct: 180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE +    Y    D W+ G +LYE
Sbjct: 180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
                P + +L S F +     L+ V+E  + GDL   I    Q+     E     Y  +
Sbjct: 76  LPGKPPFLTQLHSCFQTMD--RLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAE 129

Query: 178 IAAALQYVHSRRILHR 193
           IA  L ++ S+ I++R
Sbjct: 130 IAIGLFFLQSKGIIYR 145

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 46  SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           + +GT  YM+PE L K + Y   +D +SLGC+L++++   SPF 
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 392

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
           +L    T   P IV +  AF +    +L  +L+L + GDL   +     +    +E  + 
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPD--KLSFILDLMNGGDLHYHL----SQHGVFSEADMR 295

Query: 173 SYFRQIAAALQYVHSRRILHR 193
            Y  +I   L+++H+R +++R
Sbjct: 296 FYAAEIILGLEHMHNRFVVYR 316

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 48.3 bits (115), Expect = 6e-07
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 10  SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYE 43
           + +GT  YM+PE L K + Y   +D +SLGC+L++
Sbjct: 349 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 60.4 bits (146), Expect = 5e-11
 Identities = 19/45 (42%), Positives = 28/45 (62%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +F GTP Y++PE +    Y    D W+ G +LYEM+A Q+PF  +
Sbjct: 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +F GTP Y++PE +    Y    D W+ G +LYE
Sbjct: 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
             P + +L S F  ++   L+ V+E  + GDL   I    Q+     E     Y  +IA 
Sbjct: 400 KPPFLTQLHSCF--QTMDRLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAI 453

Query: 181 ALQYVHSRRILHR 193
            L ++ S+ I++R
Sbjct: 454 GLFFLQSKGIIYR 466

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 59.3 bits (144), Expect = 7e-11
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E+   + P    H
Sbjct: 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.8 bits (122), Expect = 6e-08
 Identities = 15/35 (42%), Positives = 25/35 (71%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++F+GTP++M+PE +K+  Y   +D+WSLG    E
Sbjct: 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
                P + +   ++      +L++++E    G    ++     +   L E  + +  R+
Sbjct: 75  SQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILRE 127

Query: 178 IAAALQYVHSRRILHR 193
           I   L Y+HS + +HR
Sbjct: 128 ILKGLDYLHSEKKIHR 143

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 59.2 bits (144), Expect = 9e-11
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + +GT YYM+PER  E   ++ +D+++L CVLYE +    P+
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPY 235

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           + +GT YYM+PER  E   ++ +D+++L CVLYE
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYE 227

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 12/77 (15%)

Query: 120 LHHPNIVELRSAFASRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
           L  P++V +        G+    L++ + L +  DLA ++      +  LA     +  R
Sbjct: 91  LQEPHVVPIHD-----FGEIDGQLYVDMRLINGVDLAAMLRR----QGPLAPPRAVAIVR 141

Query: 177 QIAAALQYVHSRRILHR 193
           QI +AL   H+    HR
Sbjct: 142 QIGSALDAAHAAGATHR 158

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNI++L   F  +  +  +LV+E    G+L   I      +    E       +Q
Sbjct: 91  KLLDHPNIMKLYDFFEDK--RNYYLVMECYKGGELFDEI----IHRMKFNEVDAAVIIKQ 144

Query: 178 IAAALQYVHSRRILHR 193
           + + + Y+H   I+HR
Sbjct: 145 VLSGVTYLHKHNIVHR 160

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 56.6 bits (137), Expect = 8e-10
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
             LGT YY++PE L++ KY    DVWS+G +L+ ++A   PF  + 
Sbjct: 197 ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQT 241

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
               +   LGT YY++PE L++ KY    DVWS+G +L+ + +    F G        ++
Sbjct: 191 NQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249

Query: 60  KELKYSFPSDVWS 72
           ++ KY+F S  W 
Sbjct: 250 EKGKYTFDSPEWK 262

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNI++L   F  +     +LV E+   G+L   I      +   +E       RQ
Sbjct: 81  KQLDHPNIMKLYEFFEDK--GYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQ 134

Query: 178 IAAALQYVHSRRILHR 193
           + + + Y+H  +I+HR
Sbjct: 135 VLSGITYMHKNKIVHR 150

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 56.6 bits (137), Expect = 8e-10
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
             +GT YY++PE L    Y    DVWS G +LY +++   PF     +   + K++
Sbjct: 187 DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA--NEYDILKKV 239

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
            +  +   +GT YY++PE L    Y    DVWS G +LY + S    F G   Y   +++
Sbjct: 181 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239

Query: 60  KELKYSFPSDVWS 72
           ++ KY+F    W 
Sbjct: 240 EKGKYTFELPQWK 252

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 59.2 bits (144), Expect = 9e-11
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 15/71 (21%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--G-TPYYMSP--------ERLKE 61
            T  +++PE L+   Y    D+WSLG +LY     +  G TP+   P         R+  
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLY----TMLTGYTPFANGPDDTPEEILARIGS 237

Query: 62  LKYSFPSDVWS 72
            K+S     W+
Sbjct: 238 GKFSLSGGYWN 248

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HPNI+ L+  +     + +++V EL   G+L   I     ++   +E    +    
Sbjct: 71  RYGQHPNIITLKDVYDDG--KYVYVVTELMKGGELLDKI----LRQKFFSEREASAVLFT 124

Query: 178 IAAALQYVHSRRILHR 193
           I   ++Y+H++ ++HR
Sbjct: 125 ITKTVEYLHAQGVVHR 140

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 55.0 bits (133), Expect = 3e-09
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI-SLNGLCKRIEMALF 106
            T  +++PE L+   Y    D+WSLG +LY M+   +PF +    +   +  RI    F
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HPNI++L+  F + +  E+ LVLEL   G+L   I E    K + +E       +Q
Sbjct: 103 LRLSHPNIIKLKEIFETPT--EISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQ 156

Query: 178 IAAALQYVHSRRILHR 193
           I  A+ Y+H   I+HR
Sbjct: 157 ILEAVAYLHENGIVHR 172

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSPERLKEL----- 62
           +  GTP Y +PE L+   Y    D+WS+G + Y     L  G   +      + +     
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITY----ILLCGFEPFYDERGDQFMFRRIL 264

Query: 63  --KYSFPSDVWS 72
             +Y F S  W 
Sbjct: 265 NCEYYFISPWWD 276

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
           +  GTP Y +PE L+   Y    D+WS+G + Y ++    PF+ +
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HP+I++L     + +  ++ +V+E A  G+L   I     +K  + E     +F+Q
Sbjct: 64  KLLRHPHIIKLYDVITTPT--DIVMVIEYAG-GELFDYIV----EKKRMTEDEGRRFFQQ 116

Query: 178 IAAALQYVHSRRILHR 193
           I  A++Y H  +I+HR
Sbjct: 117 IICAIEYCHRHKIVHR 132

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 41  LYEVDSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHISLN 95
           +    +FL    G+P Y +PE +    Y+ P  DVWS G VLY M+  + PF  + I   
Sbjct: 157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN- 215

Query: 96  GLCKRIEMALF 106
            L K++   ++
Sbjct: 216 -LFKKVNSCVY 225

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)

Query: 9   DSFL----GTPYYMSPERLKELKYSFP-SDVWSLGCVLY 42
            +FL    G+P Y +PE +    Y+ P  DVWS G VLY
Sbjct: 161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLY 199

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L HPNI+ L   F      +++LV+EL   G+L   +      K    E       + 
Sbjct: 61  KSLDHPNIIRLYETFEDN--TDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKD 114

Query: 178 IAAALQYVHSRRILHR 193
           + +A+ Y H   + HR
Sbjct: 115 VLSAVAYCHKLNVAHR 130

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 21/75 (28%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTPYYMSP----------E 57
           + +GTPYY+SP+ L+   Y    D WS G ++Y     L  G P    P           
Sbjct: 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMY----VLLCGYP----PFSAPTDSEVML 217

Query: 58  RLKELKYSFPSDVWS 72
           +++E  ++FP   W 
Sbjct: 218 KIREGTFTFPEKDWL 232

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
           + +GTPYY+SP+ L+   Y    D WS G ++Y ++    PF +   S
Sbjct: 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS 213

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 41  LYEVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
                   GT  +++PE L E      ++  D++S GCV Y +++  S  F K +     
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239

Query: 98  CKRIEMALFPPLPSG 112
                 +L    P  
Sbjct: 240 ILLGACSLDCLHPEK 254

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPN++        R  Q  ++ +EL     L   +    QK          +  +Q  +
Sbjct: 76  EHPNVIRYFCTEKDR--QFQYIAIELCA-ATLQEYVE---QKDFAHLGLEPITLLQQTTS 129

Query: 181 ALQYVHSRRILHR 193
            L ++HS  I+HR
Sbjct: 130 GLAHLHSLNIVHR 142

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 5   TSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER--- 58
            S      GT  +++PE L E      ++  D++S GCV Y V S    P+  S +R   
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239

Query: 59  --LKELKYSFPSDVWSL 73
             L              
Sbjct: 240 ILLGACSLDCLHPEKHE 256

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 58.9 bits (142), Expect = 1e-10
 Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 5/47 (10%)

Query: 46  SFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPF 87
                P   +   L          +F  D W+LG  +Y +     P 
Sbjct: 271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 52.4 bits (125), Expect = 2e-08
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 9/78 (11%)

Query: 5   TSSVDSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMS 55
            S +      P   +   L          +F  D W+LG  +Y +               
Sbjct: 266 VSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG 325

Query: 56  PERLKELKYSFPSDVWSL 73
            E +     + P  V +L
Sbjct: 326 SEWIFRSCKNIPQPVRAL 343

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 51.2 bits (122), Expect = 5e-08
 Identities = 9/78 (11%), Positives = 19/78 (24%), Gaps = 2/78 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELA--DQGDLALVIAECRQKKCHLAECLVWSYF 175
           K      ++ +R           F +      +      V+         L         
Sbjct: 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLT 217

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+   L  +H   ++H 
Sbjct: 218 LQVIRLLASLHHYGLVHT 235

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 58.5 bits (142), Expect = 1e-10
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQG-DLALVIAECRQKKCHLAECLVWSYF 175
                HP ++ L   F ++      LVLE      DL   I E    K  L E     +F
Sbjct: 92  GAGGGHPGVIRLLDWFETQE--GFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFF 145

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+ AA+Q+ HSR ++HR
Sbjct: 146 GQVVAAIQHCHSRGVVHR 163

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 47.7 bits (114), Expect = 7e-07
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPF 87
             F GT  Y  PE +   +Y      VWSLG +LY+MV    PF
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 15/64 (23%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYE--------------VDSFLGTPYY 53
             F GT  Y  PE +   +Y      VWSLG +LY+              +++ L  P +
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAH 255

Query: 54  MSPE 57
           +SP+
Sbjct: 256 VSPD 259

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 16/47 (34%), Positives = 29/47 (61%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            + +GTPY+M+PE +    Y    D+WSLG +  EM+  + P+ +++
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
            + +GTPY+M+PE +    Y    D+WSLG +  E
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   +PNIV    ++    G EL++V+E    G L  V+ E    +  +A        R+
Sbjct: 72  RENKNPNIVNYLDSY--LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC-----RE 124

Query: 178 IAAALQYVHSRRILHR 193
              AL+++HS +++HR
Sbjct: 125 CLQALEFLHSNQVIHR 140

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            S +GTPY+M+PE +    Y+   D+WSLG ++ EMV  + P+FS  
Sbjct: 199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
            S +GTPY+M+PE +    Y+   D+WSLG ++ E
Sbjct: 199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   H N+VE+  ++    G+EL++++E    G L  ++++ R  +  +A          
Sbjct: 97  RDYQHFNVVEMYKSY--LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVC-----EA 149

Query: 178 IAAALQYVHSRRILHR 193
           +  AL Y+H++ ++HR
Sbjct: 150 VLQALAYLHAQGVIHR 165

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNI++L            ++V EL   G+L   I +    +   +E       +Q
Sbjct: 76  KKLDHPNIMKLFEILEDS--SSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQ 129

Query: 178 IAAALQYVHSRRILHR 193
           + + + Y+H   I+HR
Sbjct: 130 VFSGITYMHKHNIVHR 145

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 53.8 bits (130), Expect = 6e-09
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 13/70 (18%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERLKEL--- 62
             +GT YY++PE L+   Y    DVWS G +LY     L  GTP  Y  +   + +    
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILY----ILLSGTPPFYGKNEYDILKRVET 236

Query: 63  -KYSFPSDVW 71
            KY+F    W
Sbjct: 237 GKYAFDLPQW 246

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
             +GT YY++PE L+   Y    DVWS G +LY +++   PF+ K
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNI++L            ++V EL   G+L   I     K+   +E       +Q
Sbjct: 76  KKLDHPNIMKLFEILEDS--SSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQ 129

Query: 178 IAAALQYVHSRRILHR 193
           + + + Y+H   I+HR
Sbjct: 130 VFSGITYMHKHNIVHR 145

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
             +GT YY++PE L+   Y    DVWS G +LY +++   PF+ K  +   + KR+
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK--NEYDILKRV 234

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
             +GT YY++PE L+   Y    DVWS G +LY + S    F G   Y   +R++  KY+
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 66  FPSDVWS 72
           F    W 
Sbjct: 241 FDLPQWR 247

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 45  DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK-HISLNGLCKR 100
            +  GT  YM+PE     K   YSF  D WSLG   YE++  + P+  +   S   +   
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT 231

Query: 101 IEMA--LFPP 108
            E     +P 
Sbjct: 232 FETTVVTYPS 241

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HP +V L  +F      ++F+V++L   GDL   +    Q+  H  E  V  +  +
Sbjct: 70  QGLEHPFLVNLWYSFQDEE--DMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICE 123

Query: 178 IAAALQYVHSRRILHR 193
           +  AL Y+ ++RI+HR
Sbjct: 124 LVMALDYLQNQRIIHR 139

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 15/80 (18%)

Query: 9   DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEVDSFLG-TPYYM-SPERLKEL- 62
            +  GT  YM+PE     K   YSF  D WSLG   YE+    G  PY++ S    KE+ 
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL--LRGRRPYHIRSSTSSKEIV 229

Query: 63  ------KYSFPSDVWSLGCV 76
                   ++PS  WS   V
Sbjct: 230 HTFETTVVTYPSA-WSQEMV 248

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 47  FLGTPYYMSPERLKEL--KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
             GTPY+++PE L      Y    D WS G +L+ ++    PF     +      ++   
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV--NDADTISQVLNK 291

Query: 105 LF 106
             
Sbjct: 292 KL 293

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.1 bits (130), Expect = 5e-09
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 11  FLGTPYYMSPERLKEL--KYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKY 64
             GTPY+++PE L      Y    D WS G +L+ +      F G     +  ++   K 
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL 293

Query: 65  SFPSDVWS 72
            F +  ++
Sbjct: 294 CFENPNYN 301

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 26/112 (23%), Positives = 36/112 (32%), Gaps = 38/112 (33%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDL------------------------- 152
           K LHHPNI  L   +       + LV+EL   G L                         
Sbjct: 83  KKLHHPNIARLYEVYEDEQ--YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140

Query: 153 -----------ALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
                        +            E L+ +  RQI +AL Y+H++ I HR
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHR 192

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 57.8 bits (140), Expect = 3e-10
 Identities = 17/47 (36%), Positives = 31/47 (65%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++ +GTP++M+PE ++E+ Y+  +D+WSLG    EM   + P+   H
Sbjct: 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 26/35 (74%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           ++ +GTP++M+PE ++E+ Y+  +D+WSLG    E
Sbjct: 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIE 217

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +    P++V+   ++      +L++V+E    G ++ +I    +    L E  + +  + 
Sbjct: 79  QQCDSPHVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQS 133

Query: 178 IAAALQYVHSRRILHR 193
               L+Y+H  R +HR
Sbjct: 134 TLKGLEYLHFMRKIHR 149

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 46  SFLGTPYYMSPERLKELK--YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG--LCKRI 101
            F GT  YM+P+ ++     +    D WSLG ++YE++   SPF       +   + +RI
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278

Query: 102 EMA--LFPP 108
             +   +P 
Sbjct: 279 LKSEPPYPQ 287

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
                P +V L  AF  ++  +L L+L+  + G+L   +     ++    E  V  Y  +
Sbjct: 114 HIRQSPFLVTLHYAF--QTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGE 167

Query: 178 IAAALQYVHSRRILHR 193
           I  AL+++H   I++R
Sbjct: 168 IVLALEHLHKLGIIYR 183

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 11/71 (15%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLY-----------EVDSFLGTPYYMSPERLKE 61
            T +Y +PE L +  Y    D+WSLG +LY              S   T      +++K+
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230

Query: 62  LKYSFPSDVWS 72
             +SF  + W 
Sbjct: 231 GDFSFEGEAWK 241

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK 90
            T +Y +PE L +  Y    D+WSLG +LY M++ Q PF S 
Sbjct: 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 53.8 bits (130), Expect = 6e-09
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNIV+L   F  +     FLV+EL + G+L   I    +KK H +E       R++ +
Sbjct: 64  GHPNIVKLHEVFHDQ--LHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVS 117

Query: 181 ALQYVHSRRILHR 193
           A+ ++H   ++HR
Sbjct: 118 AVSHMHDVGVVHR 130

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 57.5 bits (139), Expect = 4e-10
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAEC---RQKKCHLAECLVWSY 174
           ++  HPN++    +  +   + L++ LEL +  +L  ++       +      E    S 
Sbjct: 64  ESDDHPNVIRYYCSETTD--RFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISL 120

Query: 175 FRQIAAALQYVHSRRILHR 193
            RQIA+ + ++HS +I+HR
Sbjct: 121 LRQIASGVAHLHSLKIIHR 139

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 46  SFLGTPYYMSPERLKEL-------KYSFPSDVWSLGCVLYEMVALQSPFFS 89
           +  GT  + +PE L+E        + +   D++S+GCV Y +++     F 
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKEL-------KYSFPSDVWSLGCVLYEVDSFLGTPYY 53
            S   +++++  GT  + +PE L+E        + +   D++S+GCV Y + S    P+ 
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

Query: 54  MSPERLKEL---KYSFPSDVW 71
               R   +    +S      
Sbjct: 242 DKYSRESNIIRGIFSLDEMKC 262

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 118 KTLHH--PNIVELRSAFASRSGQELFLVLELAD-QGDLALVIAECRQKKCHLAECLVWSY 174
           K +      ++ L   F         L+LE  +   DL   I E    +  L E L  S+
Sbjct: 101 KKVSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITE----RGALQEELARSF 154

Query: 175 FRQIAAALQYVHSRRILHR 193
           F Q+  A+++ H+  +LHR
Sbjct: 155 FWQVLEAVRHCHNCGVLHR 173

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYEMVALQSPF 87
             F GT  Y  PE ++  +Y   S  VWSLG +LY+MV    PF
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 15/64 (23%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPS-DVWSLGCVLYE--------------VDSFLGTPYY 53
             F GT  Y  PE ++  +Y   S  VWSLG +LY+              +   +     
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 265

Query: 54  MSPE 57
           +S E
Sbjct: 266 VSSE 269

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.0 bits (138), Expect = 4e-10
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +  G+  +M+PE  +   YS   DV+S G +L+E++  + PF      + G   RI  A+
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF----DEIGGPAFRIMWAV 217

Query: 106 F----PPLPSGV 113
                PPL   +
Sbjct: 218 HNGTRPPLIKNL 229

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 47.7 bits (114), Expect = 8e-07
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
              + + +  G+  +M+PE  +   YS   DV+S G +L+EV
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             ++HPNIV+L  A        + LV+E A+ G L  V+        +       S+  Q
Sbjct: 56  SRVNHPNIVKLYGA----CLNPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQ 110

Query: 178 IAAALQYVHSRR---ILHR 193
            +  + Y+HS +   ++HR
Sbjct: 111 CSQGVAYLHSMQPKALIHR 129

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 57.0 bits (138), Expect = 6e-10
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKEL----KY 64
            TPYY++PE L   KY    D+WSLG ++Y +      F           +K      +Y
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284

Query: 65  SFPSDVWS 72
            FP+  WS
Sbjct: 285 EFPNPEWS 292

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISL--NGLCKRIEMALF 106
            TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H      G+  RI M  +
Sbjct: 225 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 118 KTLHHPNIVELRSAF--ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +    P+IV +   +       + L +V+E  D G+L   I +  +      E       
Sbjct: 110 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIM 167

Query: 176 RQIAAALQYVHSRRILHR 193
           + I  A+QY+HS  I HR
Sbjct: 168 KSIGEAIQYLHSINIAHR 185

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 56.5 bits (137), Expect = 6e-10
 Identities = 18/43 (41%), Positives = 26/43 (60%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +  LGT  Y SPE+ K       +D++S+G VLYEM+  + PF
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           T+ V   LGT  Y SPE+ K       +D++S+G VLYE
Sbjct: 169 TNHV---LGTVQYFSPEQAKGEATDECTDIYSIGIVLYE 204

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 44.5 bits (106), Expect = 8e-06
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 120 LHHPNIVELRSAF-ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQI 178
           L H NIV   S           +LV+E  +   L+  I         +   +  ++  QI
Sbjct: 68  LSHQNIV---SMIDVDEEDDCYYLVMEYIEGPTLSEYIES--HGPLSVDTAI--NFTNQI 120

Query: 179 AAALQYVHSRRILHR 193
              +++ H  RI+HR
Sbjct: 121 LDGIKHAHDMRIVHR 135

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 57.0 bits (138), Expect = 6e-10
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 13/80 (16%)

Query: 45  DSFLGTPYYMSPERLKEL-------KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
              +GTP Y+SPE L+ +        Y    D W+LG   YEM   Q+PF++   S    
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD--STAET 278

Query: 98  CKRI----EMALFPPLPSGV 113
             +I    E    P +  GV
Sbjct: 279 YGKIVHYKEHLSLPLVDEGV 298

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
               I +L  AF  +    L+LV+E    GDL  ++++  ++   +   +   Y  +I  
Sbjct: 119 DRRWITQLHFAF--QDENYLYLVMEYYVGGDLLTLLSKFGER---IPAEMARFYLAEIVM 173

Query: 181 ALQYVHSRRILHR 193
           A+  VH    +HR
Sbjct: 174 AIDSVHRLGYVHR 186

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 56.3 bits (136), Expect = 1e-09
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 45  DSFLGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
              +GTP Y+SPE L+ +     +Y    D WSLG  +YEM+  ++PF+++  SL     
Sbjct: 234 SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE--SLVETYG 291

Query: 100 RI----EMALFPPLPSGV 113
           +I    E   FP   + V
Sbjct: 292 KIMNHKERFQFPTQVTDV 309

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 41.7 bits (98), Expect = 8e-05
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
               I  L  AF  +    L+LV++    GDL  ++++   +   L E +   Y  ++  
Sbjct: 132 DSKWITTLHYAF--QDDNNLYLVMDYYVGGDLLTLLSKFEDR---LPEEMARFYLAEMVI 186

Query: 181 ALQYVHSRRILHR 193
           A+  VH    +HR
Sbjct: 187 AIDSVHQLHYVHR 199

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLG-TPYYMSP- 56
              +++ +   TPYY++PE L   KY    D+WSLG ++Y +      F   T   +SP 
Sbjct: 181 TTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240

Query: 57  --ERLKELKYSFPSDVWS 72
              R++  +Y FP+  WS
Sbjct: 241 MKRRIRLGQYGFPNPEWS 258

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH--ISLNGLCKRIEMALF 106
            TPYY++PE L   KY    D+WSLG ++Y ++    PF+S        G+ +RI +  +
Sbjct: 191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 53.5 bits (129), Expect = 7e-09
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 118 KTLHHPNIVELRSAF--ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +    P+IV +   +       + L +++E  + G+L   I E  +      E       
Sbjct: 77  QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIM 134

Query: 176 RQIAAALQYVHSRRILHR 193
           R I  A+Q++HS  I HR
Sbjct: 135 RDIGTAIQFLHSHNIAHR 152

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI--EM 103
           +  GTP  ++PE +    Y+   D W+LG ++YEM A   PFF+       + ++I    
Sbjct: 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSGK 254

Query: 104 ALFPP 108
             FP 
Sbjct: 255 VRFPS 259

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +  GTP  ++PE +    Y+   D W+LG ++YE
Sbjct: 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + ++ P +V+L  +F  +    L++V+E    G++   +    ++    +E     Y  Q
Sbjct: 96  QAVNFPFLVKLEFSF--KDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQ 149

Query: 178 IAAALQYVHSRRILHR 193
           I    +Y+HS  +++R
Sbjct: 150 IVLTFEYLHSLDLIYR 165

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQE-----LFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
             LHHPNIV+L+S F +   ++     L +V+E      L        +++      L+ 
Sbjct: 74  AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIK 132

Query: 173 SYFRQIAAALQYVH--SRRILHR 193
            +  Q+  ++  +H  S  + HR
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHR 155

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 50  TPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           + YY +PE       Y+   D+WS+GC+  EM+ L  P F
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM-LGEPIF 232

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAA 181
           HPNI++L+  + + +    FLV +L  +G+L   + E    K  L+E       R +   
Sbjct: 83  HPNIIQLKDTYETNT--FFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEV 136

Query: 182 LQYVHSRRILHR 193
           +  +H   I+HR
Sbjct: 137 ICALHKLNIVHR 148

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.1 bits (123), Expect = 5e-08
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 18/74 (24%)

Query: 13  GTPYYMSPERLKEL------KYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERL--- 59
           GTP Y++PE ++         Y    D+WS G ++Y     L  G+P  ++     +   
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY----TLLAGSPPFWHRKQMLMLRM 240

Query: 60  -KELKYSFPSDVWS 72
                Y F S  W 
Sbjct: 241 IMSGNYQFGSPEWD 254

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 49  GTPYYMSPERLKEL------KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
           GTP Y++PE ++         Y    D+WS G ++Y ++A   PF+ +      + + I 
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR--KQMLMLRMIM 242

Query: 103 MALF 106
              +
Sbjct: 243 SGNY 246

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 6/61 (9%)

Query: 45  DSFLGTPYYMSPERLK----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
           D+ +GTP Y+SPE LK    +  Y    D WS+G  LYEM+   +PF++   SL G   +
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--SLVGTYSK 284

Query: 101 I 101
           I
Sbjct: 285 I 285

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
              + P +V+L  AF  +  + L++V+E    GDL  +          + E     Y  +
Sbjct: 124 AFANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNL-----MSNYDVPEKWARFYTAE 176

Query: 178 IAAALQYVHSRRILHR 193
           +  AL  +HS   +HR
Sbjct: 177 VVLALDAIHSMGFIHR 192

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 55.2 bits (134), Expect = 2e-09
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA- 104
           +  GTP Y++PE +    Y+   D WS G ++YEM+A  +PF+    +     ++I  A 
Sbjct: 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS--NTMKTYEKILNAE 219

Query: 105 -LFPP 108
             FPP
Sbjct: 220 LRFPP 224

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.1 bits (100), Expect = 5e-05
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           +  GTP Y++PE +    Y+   D WS G ++YE
Sbjct: 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 195

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 38.7 bits (91), Expect = 8e-04
 Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             + HP I+ +   F  +  Q++F++++  + G+L  ++    +K       +   Y  +
Sbjct: 61  SIVTHPFIIRMWGTF--QDAQQIFMIMDYIEGGELFSLL----RKSQRFPNPVAKFYAAE 114

Query: 178 IAAALQYVHSRRILHR 193
           +  AL+Y+HS+ I++R
Sbjct: 115 VCLALEYLHSKDIIYR 130

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 19/43 (44%), Positives = 28/43 (65%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            + +GT  Y+SPE+ +       SDV+SLGCVLYE++  + PF
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           T++V   +GT  Y+SPE+ +       SDV+SLGCVLYE
Sbjct: 176 TAAV---IGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 12/79 (15%)

Query: 120 LHHPNIVELRSAF-----ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           L+HP IV   + +      + +G   ++V+E  D   L  ++    +        +    
Sbjct: 69  LNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAI--EV 121

Query: 175 FRQIAAALQYVHSRRILHR 193
                 AL + H   I+HR
Sbjct: 122 IADACQALNFSHQNGIIHR 140

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 9/78 (11%), Positives = 19/78 (24%), Gaps = 2/78 (2%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELA--DQGDLALVIAECRQKKCHLAECLVWSYF 175
           K      ++ +R           F +      +      V+         L         
Sbjct: 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLT 212

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+   L  +H   ++H 
Sbjct: 213 LQVIRLLASLHHYGLVHT 230

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 54.6 bits (131), Expect = 4e-09
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 11/53 (20%)

Query: 46  SFLGTPYYMSPE-----------RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
               +  +  PE           R +    +F  D W+LG V+Y +     P 
Sbjct: 261 VSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI 313

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 50.8 bits (121), Expect = 7e-08
 Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 15/87 (17%)

Query: 2   SVKTSSVDSFLGTPYYMSPE-----------RLKELKYSFPSDVWSLGCVLYEVDS---- 46
            V+  +      +  +  PE           R +    +F  D W+LG V+Y +      
Sbjct: 253 LVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSL 73
                     E +     + P  V +L
Sbjct: 313 ITKDAALGGSEWIFRSCKNIPQPVRAL 339

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 55.2 bits (133), Expect = 3e-09
 Identities = 8/47 (17%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI 92
              GTP + +PE ++    +  +D++++G  L  +         +++
Sbjct: 236 YLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTRNGRYV 281

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 120 LHHPNIVELR---SAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
           + HP+IV++               ++V+E      L     +       L      +Y  
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLL 189

Query: 177 QIAAALQYVHSRRILHR 193
           +I  AL Y+HS  +++ 
Sbjct: 190 EILPALSYLHSIGLVYN 206

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
              GTP + +PE ++    +  +D++++G  L  
Sbjct: 236 YLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAA 268

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 54.6 bits (132), Expect = 3e-09
 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 45  DSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
            +F+GTP +M+PE +++++ Y F +D+WS G    E+    +P+    
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 9   DSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYE 43
            +F+GTP +M+PE +++++ Y F +D+WS G    E
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH----LAECLVWS 173
              HHPNIV   ++F      EL+LV++L   G +  +I     K  H    L E  + +
Sbjct: 68  SQCHHPNIVSYYTSFVV--KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125

Query: 174 YFRQIAAALQYVHSRRILHR 193
             R++   L+Y+H    +HR
Sbjct: 126 ILREVLEGLEYLHKNGQIHR 145

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 54.7 bits (132), Expect = 3e-09
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 45  DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +SF+GTPY+M+PE    + E +Y    DVWSLG    E+   + P F+ +
Sbjct: 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 9   DSFLGTPYYMSPE---RLKELKYSFPSDVWSLGCVLYE 43
           +SF+GTPY+M+PE    + E +Y    DVWSLG    E
Sbjct: 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPN ++ R  +        +LV+E        L+    +     L E  + +    
Sbjct: 109 QKLRHPNTIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHG 162

Query: 178 IAAALQYVHSRRILHR 193
               L Y+HS  ++HR
Sbjct: 163 ALQGLAYLHSHNMIHR 178

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 18/42 (42%), Positives = 28/42 (66%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           S  GTP +M+PE L++   +  SDV+S G +L+E+  LQ P+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HPNIV      A      L +V E   +G L  ++ +   ++  L E    S    
Sbjct: 89  KRLRHPNIVLFMG--AVTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYD 145

Query: 178 IAAALQYVHSRR--ILHR 193
           +A  + Y+H+R   I+HR
Sbjct: 146 VAKGMNYLHNRNPPIVHR 163

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
            +    S  S  GTP +M+PE L++   +  SDV+S G +L+E
Sbjct: 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 54.3 bits (131), Expect = 5e-09
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 122 HPNIVELRSAFASRSGQELFLVLELADQGDL--ALVIAECRQKKCHLAECLVWSYFRQIA 179
           HP+I+ L  ++ S S   +FLV +L  +G+L   L       +K  L+E    S  R + 
Sbjct: 159 HPHIITLIDSYESSS--FMFLVFDLMRKGELFDYLT------EKVALSEKETRSIMRSLL 210

Query: 180 AALQYVHSRRILHR 193
            A+ ++H+  I+HR
Sbjct: 211 EAVSFLHANNIVHR 224

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 51.3 bits (123), Expect = 5e-08
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 18/73 (24%)

Query: 13  GTPYYMSPERLK------ELKYSFPSDVWSLGCVLYEVDSFL--GTP--YYMSPERL--- 59
           GTP Y++PE LK         Y    D+W+ G +L+     L  G+P  ++     +   
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF----TLLAGSPPFWHRRQILMLRM 316

Query: 60  -KELKYSFPSDVW 71
             E +Y F S  W
Sbjct: 317 IMEGQYQFSSPEW 329

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)

Query: 49  GTPYYMSPERLK------ELKYSFPSDVWSLGCVLY 78
           GTP Y++PE LK         Y    D+W+ G +L+
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 53.8 bits (130), Expect = 6e-09
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            H N++EL   F        +LV E    G +   I     K+ H  E       + +A+
Sbjct: 69  GHRNVLELIEFFEEE--DRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVAS 122

Query: 181 ALQYVHSRRILHR 193
           AL ++H++ I HR
Sbjct: 123 ALDFLHNKGIAHR 135

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 50.7 bits (122), Expect = 6e-08
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 24/84 (28%)

Query: 13  GTPYYMSPERLK-----ELKYSFPSDVWSLGCVLY-----------EVDSFLGTPYYMSP 56
           G+  YM+PE ++        Y    D+WSLG +LY              S  G     + 
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242

Query: 57  --------ERLKELKYSFPSDVWS 72
                   E ++E KY FP   W+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWA 266

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 49  GTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL-----C 98
           G+  YM+PE ++        Y    D+WSLG +LY +++   PF  +  S  G      C
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242

Query: 99  KRIEMALF 106
              +  LF
Sbjct: 243 PACQNMLF 250

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 54.1 bits (130), Expect = 7e-09
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 27/122 (22%)

Query: 79  EMVALQ--SPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPNIVELRSAFAS 134
            +VA++     F   I     CKRI  E+A+              L+H ++V++      
Sbjct: 79  RVVAIKKILRVFEDLI----DCKRILREIAIL-----------NRLNHDHVVKVLDIVIP 123

Query: 135 RSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL 191
           +      EL++VLE+AD  D   +     +   +L E  + +    +   ++YVHS  IL
Sbjct: 124 KDVEKFDELYVVLEIADS-DFKKLF----RTPVYLTELHIKTLLYNLLVGVKYVHSAGIL 178

Query: 192 HR 193
           HR
Sbjct: 179 HR 180

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 5/52 (9%)

Query: 45  DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           DSF+GTPY+M+PE      +K+  Y + +D+WSLG  L EM  ++ P    +
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            T  HP IV+L  A+      +L++++E    G +  ++ E  +    L E  +    RQ
Sbjct: 71  ATCDHPYIVKLLGAYYH--DGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQ 125

Query: 178 IAAALQYVHSRRILHR 193
           +  AL ++HS+RI+HR
Sbjct: 126 MLEALNFLHSKRIIHR 141

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 5/40 (12%)

Query: 9   DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYE 43
           DSF+GTPY+M+PE      +K+  Y + +D+WSLG  L E
Sbjct: 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 214

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           +TL+H +I++ +          L LV+E    G L   L      +    LA+ L+++  
Sbjct: 88  RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQ- 141

Query: 176 RQIAAALQYVHSRRILHR 193
            QI   + Y+H++  +HR
Sbjct: 142 -QICEGMAYLHAQHYIHR 158

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMV 81
            +PE LKE K+ + SDVWS G  LYE++
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELL 231

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFP 67
            +PE LKE K+ + SDVWS G  LYE+ +   +      + L+ +  +  
Sbjct: 204 YAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.2 bits (128), Expect = 1e-08
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)

Query: 45  DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           ++F+GTPY+M+PE        +  Y F SD+WSLG    EM     P    H
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 9   DSFLGTPYYMSPE-----RLKELKYSFPSDVWSLGCVLYE 43
           ++F+GTPY+M+PE        +  Y F SD+WSLG    E
Sbjct: 187 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 121 HHPNIVELRSAF----ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR 176
           HH NI     AF          +L+LV+E    G +  +I   +     L E  +    R
Sbjct: 79  HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT--LKEEWIAYICR 136

Query: 177 QIAAALQYVHSRRILHR 193
           +I   L ++H  +++HR
Sbjct: 137 EILRGLSHLHQHKVIHR 153

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP 56
           + +G PY+M+PE +    Y    DV+S G VL E+   +       P
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           + +G PY+M+PE +    Y    DV+S G VL E++   +  
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPN+++          + L  + E    G L  +I   +            S+ + 
Sbjct: 62  RCLEHPNVLKFIGV--LYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKD 116

Query: 178 IAAALQYVHSRRILHR 193
           IA+ + Y+HS  I+HR
Sbjct: 117 IASGMAYLHSMNIIHR 132

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 45  DSFLGTPYYMSPERLKELK--YSFPSDVWSLGCVLYEMVALQSPFFSKH 91
              +    ++SPE L++    Y   SD++S+G    E+     PF    
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 47.6 bits (113), Expect = 8e-07
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K  +HPNIV  R+ F +    EL++V      G    +I         + E  +    + 
Sbjct: 81  KLFNHPNIVPYRATFIA--DNELWVVTSFMAYGSAKDLICTHFMDG--MNELAIAYILQG 136

Query: 178 IAAALQYVHSRRILHR 193
           +  AL Y+H    +HR
Sbjct: 137 VLKALDYIHHMGYVHR 152

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 45.7 bits (108), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 9   DSFLGTPYYMSPERLKELK--YSFPSDVWSLGCVLYE 43
              +    ++SPE L++    Y   SD++S+G    E
Sbjct: 193 KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 229

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           S  G   +M+PE ++   +S  SDVWS G +L+E++  + PF
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 47.3 bits (113), Expect = 8e-07
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HPNI+ LR          L LV+E A  G L  V+     K+      + W+   Q
Sbjct: 61  AMLKHPNIIALRG--VCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWA--VQ 113

Query: 178 IAAALQYVHSRR---ILHR 193
           IA  + Y+H      I+HR
Sbjct: 114 IARGMNYLHDEAIVPIIHR 132

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 14/39 (35%), Positives = 24/39 (61%)

Query: 6   SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           ++  S  G   +M+PE ++   +S  SDVWS G +L+E+
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 118 KTLHHPNIVELRSAF--ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +    P+IV +   +       + L +V+E  D G+L   I +  +      E       
Sbjct: 66  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIM 123

Query: 176 RQIAAALQYVHSRRILHR 193
           + I  A+QY+HS  I HR
Sbjct: 124 KSIGEAIQYLHSINIAHR 141

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           K LH   IV+ R        Q L LV+E    G L   L     ++ +  L    +  Y 
Sbjct: 79  KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-----QRHRARLDASRLLLYS 133

Query: 176 RQIAAALQYVHSRRILHR 193
            QI   ++Y+ SRR +HR
Sbjct: 134 SQICKGMEYLGSRRCVHR 151

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFP 67
            +PE L +  +S  SDVWS G VLYE+ ++       S E L+ +     
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 246

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L +  +S  SDVWS G VLYE+        
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 51.9 bits (125), Expect = 3e-08
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L+H NIV+ +       G  + L++E    G L   + + +  K +L + L ++   Q
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAV--Q 134

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+ SR+ +HR
Sbjct: 135 ICKGMDYLGSRQYVHR 150

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMV 81
            +PE L + K+   SDVWS G  L+E++
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELL 223

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSF 47
            +PE L + K+   SDVWS G  L+E+ ++
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLTY 225

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           K+L H NIV+ +    S   + L L++E    G L   L     ++ K  +    +  Y 
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-----QKHKERIDHIKLLQYT 120

Query: 176 RQIAAALQYVHSRRILHR 193
            QI   ++Y+ ++R +HR
Sbjct: 121 SQICKGMEYLGTKRYIHR 138

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
            +PE L E K+S  SDVWS G VLYE+ +++        E ++ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMV 81
            +PE L E K+S  SDVWS G VLYE+ 
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELF 211

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 51.6 bits (124), Expect = 3e-08
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K+L H NIV+ +    S   + L L++E    G L     +  +++    + L ++   Q
Sbjct: 97  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL-RDYLQKHKERIDHIKLLQYTS--Q 153

Query: 178 IAAALQYVHSRRILHR 193
           I   ++Y+ ++R +HR
Sbjct: 154 ICKGMEYLGTKRYIHR 169

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 17/45 (37%), Positives = 26/45 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
            +PE L E K+S  SDVWS G VLYE+ +++        E ++ +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMV 81
            +PE L E K+S  SDVWS G VLYE+ 
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELF 242

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 46  SFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
             LG   +M+PE    +E  Y+  +D +S   +LY ++  + PF
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L+HPNIV+L             +V+E    GDL   +     K   +   +       
Sbjct: 78  SNLNHPNIVKLYGL----MHNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLMLD 130

Query: 178 IAAALQYVHSRR--ILHR 193
           IA  ++Y+ ++   I+HR
Sbjct: 131 IALGIEYMQNQNPPIVHR 148

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 3   VKTSSVDSFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEV 44
               SV   LG   +M+PE    +E  Y+  +D +S   +LY +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
             PNI+ L         +   LV E  +  D   +     Q    L +  +  Y  +I  
Sbjct: 89  GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QT---LTDYDIRFYMYEILK 141

Query: 181 ALQYVHSRRILHR 193
           AL Y HS  I+HR
Sbjct: 142 ALDYCHSMGIMHR 154

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFF 88
           + Y+  PE L + + Y +  D+WSLGC+L  M+  + PFF
Sbjct: 193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 49  GTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPF 87
           G+  +M+PE ++      YSF SDV++ G VLYE++  Q P+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 5   TSSVDSFLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYE 43
           +   +   G+  +M+PE ++      YSF SDV++ G VLYE
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   H NI+         +  +L +V +  +   L   +      +       +    RQ
Sbjct: 75  RKTRHVNILLFMGYS---TAPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQ 128

Query: 178 IAAALQYVHSRRILHR 193
            A  + Y+H++ I+HR
Sbjct: 129 TARGMDYLHAKSIIHR 144

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 50.9 bits (122), Expect = 6e-08
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 43  EVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIE 102
            +  ++ + +Y SPE L  + Y    D+WSLGC+L EM     P FS    ++ + K +E
Sbjct: 214 RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM-HTGEPLFSGANEVDQMNKIVE 272

Query: 103 MALFPP 108
           +   PP
Sbjct: 273 VLGIPP 278

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 50.5 bits (121), Expect = 8e-08
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           +Y SPE L  + Y    D+WSLGC+L E+    G P
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEM--HTGEP 256

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 50.9 bits (122), Expect = 6e-08
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           +Y +PE +   +Y  P D+WSLGC+L E++    P        + L   IE+   P 
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLGMPS 319

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           +Y +PE +   +Y  P D+WSLGC+L E+    G P
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAEL--LTGYP 297

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 50.7 bits (122), Expect = 8e-08
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            ++ +P++  L           + L+ +L   G L   +   R+ K ++    + ++  Q
Sbjct: 72  ASVDNPHVCRL---LGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ 125

Query: 178 IAAALQYVHSRRILHR 193
           IA  + Y+  RR++HR
Sbjct: 126 IAKGMNYLEDRRLVHR 141

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           M+ E +    Y+  SDVWS G  ++E+ +F   PY
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+ E +    Y+  SDVWS G  ++E++     P+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 50.4 bits (121), Expect = 8e-08
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+PE L +  Y+  SDVWS G +++E+ +  G+PY  +  E L +L
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+PE L +  Y+  SDVWS G +++E+  L  SP+
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 50.4 bits (121), Expect = 8e-08
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+PE L +  Y+  SDVWS G +L+E+ +  G+PY  +  E L +L
Sbjct: 260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           M+PE L +  Y+  SDVWS G +L+E+  L
Sbjct: 260 MAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+PE L +  Y+  SDVWS G +++E+ +  G+PY  +  E L +L
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSP 86
           M+PE L +  Y+  SDVWS G +++E+  L  SP
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 9/48 (18%)

Query: 49  GTPYYMSPERLKELK---------YSFPSDVWSLGCVLYEMVALQSPF 87
           G   +++PE +++L          +S  SDV++LG + YE+ A + PF
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   H N+V    A    S   L ++  L     L  V+   R  K  L         ++
Sbjct: 84  RQTRHENVVLFMGA--CMSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQE 138

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+H++ ILH+
Sbjct: 139 IVKGMGYLHAKGILHK 154

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 9/52 (17%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELK---------YSFPSDVWSLGCVLYE 43
              +   +    G   +++PE +++L          +S  SDV++LG + YE
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 50.1 bits (120), Expect = 1e-07
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M PE   E  ++  +D WS G +L+E+ S    PY   S + + E 
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 298

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M PE   E  ++  +D WS G +L+E+ +L   P+
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
            Y +PE +  L +   SD+WS GCVL E+    S  F  H  +  L   +E  + P 
Sbjct: 224 QYRAPEVILNLGWDVSSDMWSFGCVLAEL-YTGSLLFRTHEHMEHL-AMMESIIQPI 278

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
            Y +PE +  L +   SD+WS GCVL E+  + G+ 
Sbjct: 224 QYRAPEVILNLGWDVSSDMWSFGCVLAEL--YTGSL 257

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           M+PE +    Y+F SDVWS G  L+E+ S   +PY 
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSP 86
           M+PE +    Y+F SDVWS G  L+E+ +L  SP
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           +Y  PE + EL ++ P DVWS+GC+L+E   + G  
Sbjct: 204 HYRPPEVILELGWAQPCDVWSIGCILFEY--YRGFT 237

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           +Y  PE + EL ++ P DVWS+GC+L+E        F  H +   L   +E  L P 
Sbjct: 204 HYRPPEVILELGWAQPCDVWSIGCILFEY-YRGFTLFQTHENREHL-VMMEKILGPI 258

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+ E L    Y+  SDVWS G +L+E+ S  GTPY  M+   L E 
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           M+ E L    Y+  SDVWS G +L+E+V+L
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSL 237

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           MSPE LK+  ++  SDVWS G VL+E+ +    PY  +S E++   
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 252

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           MSPE LK+  ++  SDVWS G VL+E+  L + P+
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH--------LAEC 169
           K  +  ++V L        GQ   +++EL  +GDL   +   R    +        L++ 
Sbjct: 83  KEFNCHHVVRLLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140

Query: 170 LVWSYFRQIAAALQYVHSRRILHR 193
           +  +   +IA  + Y+++ + +HR
Sbjct: 141 IQMAG--EIADGMAYLNANKFVHR 162

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M PE +   +Y+  SDVW+ G VL+E+ S+   PYY M+ E +   
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M PE +   +Y+  SDVW+ G VL+E+ +    P+
Sbjct: 243 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 16  YYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           +Y +PE +  L +S P DVWS+GC+L E   +LG  
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCILIEY--YLGFT 232

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 52  YYMSPERLKELKYSFPSDVWSLGCVLYEM 80
           +Y +PE +  L +S P DVWS+GC+L E 
Sbjct: 199 HYRAPEVILALGWSQPCDVWSIGCILIEY 227

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M PE   E  ++  +D WS G +L+E+ S    PY   S + + E 
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF 257

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M PE   E  ++  +D WS G +L+E+ +L   P+
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---QKKCHLAECLVWSY 174
              +H NIV       S      F+++EL   GDL   + E R    +   LA   +   
Sbjct: 88  SKFNHQNIVRCIG--VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145

Query: 175 FRQIAAALQYVHSRRILHR 193
            R IA   QY+     +HR
Sbjct: 146 ARDIACGCQYLEENHFIHR 164

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERL 59
           M+ E L +  Y+  SDVWS G +L+E+ +  G PY  + PERL
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+ E L +  Y+  SDVWS G +L+E+V L  +P+
Sbjct: 219 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           M+PE L E  Y+  SDVWS G +L+E+ S    PY 
Sbjct: 241 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 15/30 (50%), Positives = 21/30 (70%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           M+PE L E  Y+  SDVWS G +L+E+ +L
Sbjct: 241 MAPESLFEGIYTIKSDVWSYGILLWEIFSL 270

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M PE +   K++  SDVWS G VL+E+ ++   P+Y +S     + 
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M PE +   K++  SDVWS G VL+E+    + P+
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           T  Y S E L    Y+ P+D+WS  C+ +E+      F
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLF 293

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 44.5 bits (105), Expect = 9e-06
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 14  TPYYMSPERLKELKYSFPSDVWSLGCVLYEV-------DSFLGTPYYMSPERL 59
           T  Y S E L    Y+ P+D+WS  C+ +E+       +   G  Y    + +
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI 308

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 11/32 (34%), Positives = 19/32 (59%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMV 81
           T  Y SPE L    +   +D+WS  C+++E++
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELI 229

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 14  TPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTP 51
           T  Y SPE L    +   +D+WS  C+++E+    G  
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFEL--ITGDF 233

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 118 KTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
              HHPNI+ LR  F         +L+LV EL    DLA VI     ++  ++   +  +
Sbjct: 84  NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI---HDQRIVISPQHIQYF 139

Query: 175 FRQIAAALQYVHSRRILHR 193
              I   L  +H   ++HR
Sbjct: 140 MYHILLGLHVLHEAGVVHR 158

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+PE +   K+S  SD+WS G VL+EV S+   PY   S + + E+
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.8 bits (99), Expect = 6e-05
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           M+PE +   K+S  SD+WS G VL+E+ + 
Sbjct: 197 MAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY--MSPERL 59
           M+PE + +  Y+  SDVWS G +L+E+ S    PY   +   + 
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSP 86
           M+PE + +  Y+  SDVWS G +L+E+ +L  +P
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 48.1 bits (115), Expect = 5e-07
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF-RQIA 179
            H NIV L +   + + ++++LV +  +  DL  VI     +  H        Y   Q+ 
Sbjct: 67  GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHK------QYVVYQLI 119

Query: 180 AALQYVHSRRILHR 193
             ++Y+HS  +LHR
Sbjct: 120 KVIKYLHSGGLLHR 133

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            ++ +P++  L           + L+ +L   G L   +   R+ K ++    + ++  Q
Sbjct: 72  ASVDNPHVCRL---LGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ 125

Query: 178 IAAALQYVHSRRILHR 193
           IA  + Y+  RR++HR
Sbjct: 126 IAKGMNYLEDRRLVHR 141

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           M+ E +    Y+  SDVWS G  ++E+ +F   PY
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 13/36 (36%), Positives = 23/36 (63%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           M PE +   K++  SDVWS G +L+E+ ++   P++
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 237

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.8 bits (99), Expect = 6e-05
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M PE +   K++  SDVWS G +L+E+    + P+
Sbjct: 202 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW 236

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            +L H +IV L        G  L LV +    G L   +   RQ +  L   L+ ++  Q
Sbjct: 70  GSLDHAHIVRL---LGLCPGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQ 123

Query: 178 IAAALQYVHSRRILHR 193
           IA  + Y+    ++HR
Sbjct: 124 IAKGMYYLEEHGMVHR 139

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           M+ E +   KY+  SDVWS G  ++E+ +F   PY
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 47.6 bits (114), Expect = 7e-07
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+ E L+  K++  SDVWS G +L+E+ +    PY  ++   +   
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 244

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HPN++ L      RS     +VL     GDL   I   R +  +     +  +  Q
Sbjct: 81  KDFSHPNVLSLL-GICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQ 136

Query: 178 IAAALQYVHSRRILHR 193
           +A  ++Y+ S++ +HR
Sbjct: 137 VAKGMKYLASKKFVHR 152

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+ E L+  K++  SDVWS G +L+E++     P+
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 47.6 bits (114), Expect = 8e-07
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
            +L H N++ L   +       + +V ELA  G L   L     R+ + H     +  Y 
Sbjct: 76  HSLDHRNLIRL---YGVVLTPPMKMVTELAPLGSLLDRL-----RKHQGHFLLGTLSRYA 127

Query: 176 RQIAAALQYVHSRRILHR 193
            Q+A  + Y+ S+R +HR
Sbjct: 128 VQVAEGMGYLESKRFIHR 145

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE LK   +S  SD W  G  L+E+ ++   P+
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE LK   +S  SD W  G  L+EM    Q P+
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.3 bits (113), Expect = 9e-07
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           M+PE + +  Y+  SDVWS G +L+E+ S   +PY 
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+PE + +  Y+  SDVWS G +L+E+ +L  SP+
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 17/87 (19%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDL--------------ALVIAECRQKKCHL 166
           HH N+V L     ++ G  L +++E    G+L               +   +  +    L
Sbjct: 89  HHLNVVNLL-GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147

Query: 167 AECLVWSYFRQIAAALQYVHSRRILHR 193
              + +S+  Q+A  ++++ SR+ +HR
Sbjct: 148 EHLICYSF--QVAKGMEFLASRKCIHR 172

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 47.3 bits (113), Expect = 9e-07
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           ++ E L +  Y+  SDVW+ G  ++E+ +   TPY  +    +   
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 118 KTLHHPNIVEL----RSAFASRSGQELFLVLELADQGDLALVIAECR--QKKCHLAECLV 171
           K   HP++ +L      + A        ++L     GDL   +   R  +   +L    +
Sbjct: 80  KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139

Query: 172 WSYFRQIAAALQYVHSRRILHR 193
             +   IA  ++Y+ SR  +HR
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHR 161

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           ++ E L +  Y+  SDVW+ G  ++E++   Q+P+
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 49  GTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPF 87
             P +++PE L+   E      +D+WS   +L+E+V  + PF
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HPN++ +  A  S       L+      G L  V+ E        ++ + ++    
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA--LD 119

Query: 178 IAAALQYVHSRR--ILHR 193
           +A  + ++H+    I   
Sbjct: 120 MARGMAFLHTLEPLIPRH 137

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 13  GTPYYMSPERLK---ELKYSFPSDVWSLGCVLYE 43
             P +++PE L+   E      +D+WS   +L+E
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWE 203

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           M+ E L+  K++  SDVWS G +L+E+ +    PY  ++   +   
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 308

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HPN++ L      RS     +VL     GDL   I   R +  +     +  +  Q
Sbjct: 145 KDFSHPNVLSLL-GICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQ 200

Query: 178 IAAALQYVHSRRILHR 193
           +A  ++++ S++ +HR
Sbjct: 201 VAKGMKFLASKKFVHR 216

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+ E L+  K++  SDVWS G +L+E++     P+
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           ++ E L +  Y+  SDVW+ G  ++E+ +   TPY  +    + + 
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDY 261

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 118 KTLHHPNIVELR---SAFASRSGQELFLVLELADQGDLALVIAECRQKKC--HLAECLVW 172
           K   HPN++ L       +S+   +  ++L     GDL   +   R +    H+    + 
Sbjct: 91  KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150

Query: 173 SYFRQIAAALQYVHSRRILHR 193
            +   IA  ++Y+ +R  LHR
Sbjct: 151 KFMVDIALGMEYLSNRNFLHR 171

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           ++ E L +  Y+  SDVW+ G  ++E+     +P+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 27/122 (22%)

Query: 79  EMVALQ--SPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPNIVELRSAFAS 134
           + VA++  +  F   I     CKRI  E+ +              L    I+ L      
Sbjct: 52  KNVAIKKVNRMFEDLI----DCKRILREITIL-----------NRLKSDYIIRLYDLIIP 96

Query: 135 RSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL 191
                  EL++VLE+AD  DL  +     +    L E  + +    +     ++H   I+
Sbjct: 97  DDLLKFDELYIVLEIADS-DLKKLF----KTPIFLTEEHIKTILYNLLLGENFIHESGII 151

Query: 192 HR 193
           HR
Sbjct: 152 HR 153

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 7/40 (17%)

Query: 48  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           L  P  M          +   D+  +G  LY ++  + P 
Sbjct: 170 LAYPATMPDA-------NPQDDIRGIGASLYALLVNRWPL 202

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 8/74 (10%)

Query: 120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIA 179
           +  P +  +     +R+G    +V E    G L  V           +        + +A
Sbjct: 88  IDKPGVARVLDVVHTRAG--GLVVAEWIRGGSLQEVADT------SPSPVGAIRAMQSLA 139

Query: 180 AALQYVHSRRILHR 193
           AA    H   +   
Sbjct: 140 AAADAAHRAGVALS 153

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 38.6 bits (90), Expect = 9e-04
 Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 7/32 (21%)

Query: 12  LGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
           L  P  M          +   D+  +G  LY 
Sbjct: 170 LAYPATMPDA-------NPQDDIRGIGASLYA 194

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.9 bits (111), Expect = 2e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L +P IV L         + L LV+E+A  G L   +     K+  +    V     Q
Sbjct: 391 HQLDNPYIVRL---IGVCQAEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQ 444

Query: 178 IAAALQYVHSRRILHR 193
           ++  ++Y+  +  +HR
Sbjct: 445 VSMGMKYLEEKNFVHR 460

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 43.0 bits (101), Expect = 4e-05
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE +   K+S  SDVWS G  ++E  S+   PY
Sbjct: 506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 540

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 11/80 (13%)

Query: 118 KTLHHPNIVELRSAFASRSGQELF----LVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F   S    F    LV+      DL  ++     K    +E  +  
Sbjct: 78  KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GLK---FSEEKIQY 130

Query: 174 YFRQIAAALQYVHSRRILHR 193
              Q+   L+Y+HS  ++HR
Sbjct: 131 LVYQMLKGLKYIHSAGVVHR 150

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE L+E K+S  SDVWS G +L+E+ SF   PY
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L H N+V+L           L++V E   +G L   +    +        L   +   
Sbjct: 69  TQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL--KFSLD 125

Query: 178 IAAALQYVHSRRILHR 193
           +  A++Y+     +HR
Sbjct: 126 VCEAMEYLEGNNFVHR 141

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L+E K+S  SDVWS G +L+E+ +  + P+
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 118 KTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
               H NI+ +     + +    +++++V +L +  DL  ++        H+       Y
Sbjct: 80  LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHI------CY 132

Query: 175 FR-QIAAALQYVHSRRILHR 193
           F  QI   L+Y+HS  +LHR
Sbjct: 133 FLYQILRGLKYIHSANVLHR 152

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           K   HPNIV L     ++  Q +++V+EL   GD    L     R +   L    +    
Sbjct: 167 KQYSHPNIVRLI-GVCTQ-KQPIYIVMELVQGGDFLTFL-----RTEGARLRVKTLLQMV 219

Query: 176 RQIAAALQYVHSRRILHR 193
              AA ++Y+ S+  +HR
Sbjct: 220 GDAAAGMEYLESKCCIHR 237

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE L   +YS  SDVWS G +L+E  S   +PY
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L   +YS  SDVWS G +L+E  +L  SP+
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 11/80 (13%)

Query: 118 KTLHHPNIVELRSAFASRSGQELF----LVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K ++H NI+ L + F  +   E F    LV+EL D  +L  VI   + +   L    +  
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI---QME---LDHERMSY 168

Query: 174 YFRQIAAALQYVHSRRILHR 193
              Q+   ++++HS  I+HR
Sbjct: 169 LLYQMLCGIKHLHSAGIIHR 188

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T YY +PE +  + Y    D+WS+GC++ EMV  +   F
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK-ILF 263

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 17/83 (20%)

Query: 118 KTLHHPNIVELRSAFAS----RSGQELFLVLELADQGDLALVIAECRQK--KCHLAECLV 171
           K ++H NI+ L + F         Q++++V+EL D  +L  VI   + +     +     
Sbjct: 79  KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI---QMELDHERM----- 129

Query: 172 WSYFR-QIAAALQYVHSRRILHR 193
            SY   Q+   ++++HS  I+HR
Sbjct: 130 -SYLLYQMLCGIKHLHSAGIIHR 151

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF 88
           T YY +PE +  + Y    D+WS+GC++ EM+      F
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG-VLF 226

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MS 55
            SPE +   K++  SDVWS G VL+EV S+   PY+ MS
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            SPE +   K++  SDVWS G VL+E+++  + P+
Sbjct: 217 TSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
               HPNI+ L     ++  + + +V E  + G L   L     R+         +    
Sbjct: 101 GQFDHPNIIRLE-GVVTK-SKPVMIVTEYMENGSLDSFL-----RKHDAQFTVIQLVGML 153

Query: 176 RQIAAALQYVHSRRILHR 193
           R IA+ ++Y+     +HR
Sbjct: 154 RGIASGMKYLSDMGYVHR 171

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
            + E L+  +++  SDVWS G +L+E+ +    PY  + P  L   
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF 240

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L+HPN++ L             ++L     GDL   I   + +   + + + +    Q
Sbjct: 77  RGLNHPNVLALI-GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGL--Q 132

Query: 178 IAAALQYVHSRRILHR 193
           +A  ++Y+  ++ +HR
Sbjct: 133 VARGMEYLAEQKFVHR 148

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            + E L+  +++  SDVWS G +L+E++     P+
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 11/80 (13%)

Query: 118 KTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           K   H NI+ + +     S     E++++ EL    DL  VI+       H+       Y
Sbjct: 64  KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHI------QY 116

Query: 175 F-RQIAAALQYVHSRRILHR 193
           F  Q   A++ +H   ++HR
Sbjct: 117 FIYQTLRAVKVLHGSNVIHR 136

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 45.7 bits (108), Expect = 4e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           M+PE + +  Y+  SDVWS G +L+E+ S   +PY
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.5 bits (97), Expect = 9e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL 83
           M+PE + +  Y+  SDVWS G +L+E+ +L
Sbjct: 262 MAPETIFDRVYTIQSDVWSFGVLLWEIFSL 291

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 46.0 bits (109), Expect = 4e-06
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
           M+PE +   +++  SDVW  G  ++E+      P+
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           +   HP+IV+L       +   +++++EL   G+L   L     + +K  L    +  Y 
Sbjct: 446 RQFDHPHIVKL---IGVITENPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYA 497

Query: 176 RQIAAALQYVHSRRILHR 193
            Q++ AL Y+ S+R +HR
Sbjct: 498 YQLSTALAYLESKRFVHR 515

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+PE +   +++  SDVW  G  ++E++     PF
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE     KYS  SDVW+ G +++EV S    PY
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE     KYS  SDVW+ G +++E+ +L + P+
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
             L HP +V+      S+    +++V E    G L   L     R     L    +    
Sbjct: 58  MKLSHPKLVKFY-GVCSK-EYPIYIVTEYISNGCLLNYL-----RSHGKGLEPSQLLEMC 110

Query: 176 RQIAAALQYVHSRRILHR 193
             +   + ++ S + +HR
Sbjct: 111 YDVCEGMAFLESHQFIHR 128

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
            +PE +    +S  SDVWS G V++EV ++   PY+
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE +    +S  SDVWS G V++E++A  + P+
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
               HPNI+ L     +R G+   +V E  + G L   L     R          +    
Sbjct: 105 GQFDHPNIIRLE-GVVTR-GRLAMIVTEYMENGSLDTFL-----RTHDGQFTIMQLVGML 157

Query: 176 RQIAAALQYVHSRRILHR 193
           R + A ++Y+     +HR
Sbjct: 158 RGVGAGMRYLSDLGYVHR 175

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L H N+V+L           L++V E   +G L   +    +        L +S    
Sbjct: 241 TQLRHSNLVQLL-GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--D 297

Query: 178 IAAALQYVHSRRILHR 193
           +  A++Y+     +HR
Sbjct: 298 VCEAMEYLEGNNFVHR 313

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
            +PE L+E K+S  SDVWS G +L+E+ SF   PY  +  + +   
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 398

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L+E K+S  SDVWS G +L+E+ +  + P+
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MS 55
            +PE +   K++  SDVWS G V++EV ++   PY+ +S
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 255

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE +   K++  SDVWS G V++E++   + P+
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
               H NI+ L     S+  + + ++ E  + G L   L     R+K    +   +    
Sbjct: 101 GQFSHHNIIRLE-GVISK-YKPMMIITEYMENGALDKFL-----REKDGEFSVLQLVGML 153

Query: 176 RQIAAALQYVHSRRILHR 193
           R IAA ++Y+ +   +HR
Sbjct: 154 RGIAAGMKYLANMNYVHR 171

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE L   K+S  SDVW+ G +L+E+ ++  +PY
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 42.1 bits (99), Expect = 7e-05
 Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN+V+L     +R     +++ E    G+L   + EC +++      L  +   Q
Sbjct: 271 KEIKHPNLVQLL-GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT--Q 326

Query: 178 IAAALQYVHSRRILHR 193
           I++A++Y+  +  +HR
Sbjct: 327 ISSAMEYLEKKNFIHR 342

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L   K+S  SDVW+ G +L+E+     SP+
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE L   K+S  SDVW+ G +L+E+ ++  +PY
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN+V+L     +R     +++ E    G+L   + EC +++      L      Q
Sbjct: 64  KEIKHPNLVQLL-GVCTR-EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL--YMATQ 119

Query: 178 IAAALQYVHSRRILHR 193
           I++A++Y+  +  +HR
Sbjct: 120 ISSAMEYLEKKNFIHR 135

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE L   K+S  SDVW+ G +L+E+     SP+
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 44.5 bits (106), Expect = 7e-06
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
             PE L   K+S  SD+W+ G +++E+ S    PY 
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
             PE L   K+S  SD+W+ G +++E+ +L + P+
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.5 bits (106), Expect = 7e-06
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           M+PE +   +++  SDVW  G  ++E+      P+ 
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 10/78 (12%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
           +   HP+IV+L       +   +++++EL   G+L   L     + +K  L    +  Y 
Sbjct: 71  RQFDHPHIVKL---IGVITENPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYA 122

Query: 176 RQIAAALQYVHSRRILHR 193
            Q++ AL Y+ S+R +HR
Sbjct: 123 YQLSTALAYLESKRFVHR 140

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           M+PE +   +++  SDVW  G  ++E++     PF
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 118 KTLHHPNIVELRSAF----ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F          + +LV+      DL  ++   +  +  +       
Sbjct: 79  KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRI------Q 131

Query: 174 YFR-QIAAALQYVHSRRILHR 193
           +   Q+   L+Y+H+  I+HR
Sbjct: 132 FLVYQMLKGLRYIHAAGIIHR 152

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 44.7 bits (106), Expect = 8e-06
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 37/112 (33%)

Query: 118 KTLHHPNIVELRSAFASRSG------------------------------------QELF 141
           K L H NI++L   F +                                       + L 
Sbjct: 55  KVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLN 114

Query: 142 LVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
           +++E      L  V+    +    +   L+  Y  Q+  A+ ++HS  I HR
Sbjct: 115 VIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR 165

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 44.9 bits (106), Expect = 8e-06
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE     +++  SDVWS G +L E+ +    PY
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 43.3 bits (102), Expect = 3e-05
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H  +V+L   +A  S + +++V E   +G L   +     K   L + +  +   Q
Sbjct: 317 KKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA--AQ 371

Query: 178 IAAALQYVHSRRILHR 193
           IA+ + YV     +HR
Sbjct: 372 IASGMAYVERMNYVHR 387

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE     +++  SDVWS G +L E+    + P+
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L +P IV +         +   LV+E+A+ G L     +  Q+  H+ +  +     Q
Sbjct: 73  QQLDNPYIVRM---IGICEAESWMLVMEMAELGPLN----KYLQQNRHVKDKNIIELVHQ 125

Query: 178 IAAALQYVHSRRILHR 193
           ++  ++Y+     +HR
Sbjct: 126 VSMGMKYLEESNFVHR 141

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
            +PE +   K+S  SDVWS G +++E  S+   PY 
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 44.5 bits (106), Expect = 9e-06
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE +    ++  SDVWS G +L E+ +    PY
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H  +V L   +A  + + ++++ E  + G L   +      K  + + L+     Q
Sbjct: 63  KQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK-LL-DMAAQ 117

Query: 178 IAAALQYVHSRRILHR 193
           IA  + ++  R  +HR
Sbjct: 118 IAEGMAFIEERNYIHR 133

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE +    ++  SDVWS G +L E+V   + P+
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
            SPE     +YS  SDVWS G +++EV S    PY 
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
             L HP +V+L           + LV E  + G L+  L     R ++   A   +    
Sbjct: 58  MKLSHPKLVQLY-GVCLE-QAPICLVTEFMEHGCLSDYL-----RTQRGLFAAETLLGMC 110

Query: 176 RQIAAALQYVHSRRILHR 193
             +   + Y+    ++HR
Sbjct: 111 LDVCEGMAYLEEACVIHR 128

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            SPE     +YS  SDVWS G +++E+ +  + P+
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE     +++  SDVWS G +L E+ +    PY
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H  +V+L   +A  S + +++V E   +G L   +     K   L + LV     Q
Sbjct: 234 KKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LV-DMAAQ 288

Query: 178 IAAALQYVHSRRILHR 193
           IA+ + YV     +HR
Sbjct: 289 IASGMAYVERMNYVHR 304

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
            +PE     +++  SDVWS G +L E+    + P+
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 118 KTLHHPNIVELRSAFASRSGQELF----LVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F      E F    LV  L    DL  ++   +    H+       
Sbjct: 83  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIVKCQKLTDDHV------Q 135

Query: 174 YF-RQIAAALQYVHSRRILHR 193
           +   QI   L+Y+HS  I+HR
Sbjct: 136 FLIYQILRGLKYIHSADIIHR 156

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L +P IV L         + L LV+E+A  G L   +     K+  +    V     Q
Sbjct: 65  HQLDNPYIVRL---IGVCQAEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQ 118

Query: 178 IAAALQYVHSRRILHR 193
           ++  ++Y+  +  +HR
Sbjct: 119 VSMGMKYLEEKNFVHR 134

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE +   K+S  SDVWS G  ++E  S+   PY
Sbjct: 180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L HP+IV+L         +  ++++EL   G+L   +    + K  L    +  Y  Q
Sbjct: 68  KNLDHPHIVKL---IGIIEEEPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQ 121

Query: 178 IAAALQYVHSRRILHR 193
           I  A+ Y+ S   +HR
Sbjct: 122 ICKAMAYLESINCVHR 137

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
           MSPE +   +++  SDVW     ++E+ SF   P++
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 54  MSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPF 87
           MSPE +   +++  SDVW     ++E+++  + PF
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 18  MSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPY 52
            +PE +    ++  SDVWS G +L E+ ++   PY
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           KTL H  +V+L    A  + + ++++ E   +G L   +      K  L + + +S   Q
Sbjct: 238 KTLQHDKLVKL---HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA--Q 292

Query: 178 IAAALQYVHSRRILHR 193
           IA  + ++  R  +HR
Sbjct: 293 IAEGMAFIEQRNYIHR 308

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 37/130 (28%)

Query: 79  EMVALQSPFFSKHISLNGLCKRI--EMALFPPLPSGVLYSDKTLHHPNIVELRSAFASRS 136
           + VA++    +         K    E+ +            + L H NIV++        
Sbjct: 37  KRVAIKKIVLTDPQ----SVKHALREIKII-----------RRLDHDNIVKVFEILGPSG 81

Query: 137 G------------QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFR-QIAAALQ 183
                          +++V E  +  DLA V+ +    + H         F  Q+   L+
Sbjct: 82  SQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHA------RLFMYQLLRGLK 134

Query: 184 YVHSRRILHR 193
           Y+HS  +LHR
Sbjct: 135 YIHSANVLHR 144

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 15/90 (16%)

Query: 114 LYSDKTLHHPNIVELRSA--FASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLV 171
           LY+   L H NI+   ++   +  S  +L+L+    + G L   +     +   L     
Sbjct: 53  LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSC 107

Query: 172 WSYFRQIAAALQYVHSRR--------ILHR 193
                 IA+ L ++H           I HR
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 6/45 (13%)

Query: 49  GTPYYMSPERLKE------LKYSFPSDVWSLGCVLYEMVALQSPF 87
           GT  YM+PE L E             D+W+ G VL+E+       
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 10/54 (18%)

Query: 13  GTPYYMSPERLKE------LKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSP 56
           GT  YM+PE L E             D+W+ G VL+EV     S      Y  P
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 5/44 (11%)

Query: 49  GTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GT  YM+PE L      +       D++++G VL+E+ +  +  
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 34/172 (19%)

Query: 58  RLKELKYSFPSDV-W-SLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVLY 115
              +++      + W +L         L+         L  L  +I+    P   S   +
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEM--------LQKLLYQID----PNWTSRSDH 219

Query: 116 SDKTLHHPNIV--ELRSAFASRSGQELFLVL-ELADQGDLALVIAECRQKKCHLAECLVW 172
           S       + +  ELR    S+  +   LVL  + +          C+         L+ 
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK--------ILLT 271

Query: 173 SYFRQIAAALQYVHSRRI--------LHRGE-RETFLSVLGDCVRTVSEQAK 215
           + F+Q+   L    +  I        L   E +   L  L    + +  +  
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLA--LVIAECRQKKCHLAECLVWSYF 175
             L H ++V          G E  LV E    G L   L     ++ K  +         
Sbjct: 67  SKLSHKHLVLNY-GVCVC-GDENILVQEFVKFGSLDTYL-----KKNKNCINILWKLEVA 119

Query: 176 RQIAAALQYVHSRRILHR 193
           +Q+AAA+ ++    ++H 
Sbjct: 120 KQLAAAMHFLEENTLIHG 137

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 18  MSPERLKELK-YSFPSDVWSLGCVLYEVDSFLGTPYY 53
           + PE ++  K  +  +D WS G  L+E+ S    P  
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS 220

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 6/45 (13%)

Query: 49  GTPYYMSPE------RLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           GT  YM+PE       +K  +    +D++++G V +E+    S  
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 15/89 (16%)

Query: 115 YSDKTLHHPNIVELRSA--FASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
           Y    L H NI+   +A    + +  +L+LV +  + G L   +    +    +   +  
Sbjct: 88  YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKL 144

Query: 173 SYFRQIAAALQYVHSRR--------ILHR 193
           +     A+ L ++H           I HR
Sbjct: 145 AL--STASGLAHLHMEIVGTQGKPAIAHR 171

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%)

Query: 49  GTPYYMSPERLKEL--KYSFPS----DVWSLGCVLYEMV 81
           GT  YM PE L E   +  F S    D++S G +L+E+ 
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 15/89 (16%)

Query: 115 YSDKTLHHPNIVELRSA--FASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVW 172
           Y    + H NI+   +A    + S  +L+L+ +  + G L   +   +         L  
Sbjct: 83  YQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKL 139

Query: 173 SYFRQIAAALQYVHSRR--------ILHR 193
           +Y     + L ++H+          I HR
Sbjct: 140 AY--SSVSGLCHLHTEIFSTQGKPAIAHR 166

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 16/91 (17%), Positives = 23/91 (25%), Gaps = 17/91 (18%)

Query: 115 YSDKTLHHPNIVELRSA---FASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLV 171
           Y    + H NI           +    E  LV+E    G L   +               
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSS 113

Query: 172 WSYFRQIAAALQYVHS---------RRILHR 193
                 +   L Y+H+           I HR
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHR 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	215
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.94
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.94
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.91
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.87
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.87
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.87
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.87
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.87
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.87
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.87
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.87
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.87
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.87
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.87
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.86
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.86
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.86
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.86
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.86
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.86
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.86
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.86
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.86
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.86
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.86
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.85
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.85
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.85
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.85
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.85
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.85
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.85
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.85
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.85
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.85
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.85
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.85
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.84
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.84
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.84
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.84
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.84
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.84
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.84
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.84
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.84
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.84
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.84
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.84
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.84
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.84
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.84
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.84
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.84
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.84
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.84
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.84
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.84
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.84
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.84
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.84
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.84
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.84
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.84
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.83
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.83
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.83
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.83
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.83
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.83
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.83
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.83
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.83
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.83
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.83
3niz_A	311	Rhodanese family protein; structural genomics, str	99.83
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.83
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.83
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.83
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.83
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.83
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.83
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.83
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.83
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.83
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.83
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.82
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.82
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.82
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.82
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.82
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.82
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.82
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.82
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.82
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.82
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.82
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.82
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.82
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.82
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.82
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.82
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.82
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.82
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.82
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.82
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.82
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.82
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.82
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.82
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.82
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.82
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.82
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.82
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.82
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.82
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.81
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.81
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.81
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.81
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.81
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.81
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.81
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.81
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.81
3uqc_A	286	Probable conserved transmembrane protein; structur	99.81
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.81
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.81
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.81
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.81
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.81
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.81
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.81
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.8
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.8
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.8
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.8
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.8
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.8
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.8
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.8
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.8
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.8
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.8
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.8
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.8
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.8
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.8
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.8
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.8
3bhy_A	283	Death-associated protein kinase 3; death associate	99.8
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.8
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.79
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.79
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.79
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.79
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.79
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.79
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.79
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.79
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.79
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.79
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.79
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.79
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.79
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.78
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.78
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.78
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.78
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.78
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.78
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.78
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.78
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.78
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.77
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.77
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.77
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.77
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.76
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.76
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.76
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.76
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.76
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.76
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.75
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.75
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.75
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.75
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.73
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.73
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.73
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.72
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.71
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.71
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.71
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.69
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.66
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.55
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.48
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.43
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.39
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.34
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.3
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.28
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.28
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.24
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.24
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.22
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.07
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.95
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.93
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.93
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.9
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	98.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.88
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.83
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.82
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.81
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.8
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.78
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.78
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.77
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.76
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.75
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.74
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.73
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.73
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.72
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.72
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.71
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.7
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.7
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.7
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.69
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.68
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.68
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.68
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.65
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.65
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.65
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.65
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.64
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.64
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.64
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.63
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.63
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	98.63
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.63
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.62
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.62
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.62
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.61
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.61
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.6
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.6
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.6
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.59
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.59
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.59
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.59
3niz_A	311	Rhodanese family protein; structural genomics, str	98.59
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.58
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.58
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.58
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.57
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.57
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.56
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.56
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.56
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.56
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.56
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.55
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.55
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.55
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.55
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.55
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.54
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.54
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.54
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.53
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.53
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.53
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.53
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.53
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.53
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.52
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.52
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.52
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.51
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.51
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.51
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.51
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.51
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.5
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.5
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.5
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.5
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.5
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.5
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.49
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.49
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.48
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.48
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.48
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.48
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.47
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.47
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.47
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.47
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.46
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.46
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.45
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.45
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.44
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.44
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.42
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.42
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.42
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.42
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.41
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	98.4
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.4
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.4
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.39
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.39
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.38
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.38
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	98.37
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.37
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.36
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.36
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.36
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.35
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.35
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.35
3bhy_A	283	Death-associated protein kinase 3; death associate	98.34
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.33
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.33
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.33
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.33
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.33
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.31
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.31
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.3
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.3
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.3
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.29
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.29
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.28
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.27
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.26
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.26
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.25
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	98.25
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.24
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.24
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.24
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.23
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.22
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.22
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.19
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.19
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.18
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.17
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.17
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.14
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	98.13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.12
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	98.12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.1
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.1
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.09
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.08
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	98.04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.03
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.03
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.03
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	98.03
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.03
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.02
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.02
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.01
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	97.99
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.99
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	97.99
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.99
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	97.98
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.98
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	97.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	97.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	97.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	97.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	97.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	97.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	97.93
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	97.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	97.92
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	97.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.9
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.9
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.9
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.88
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	97.88
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.87
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.86
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	97.82
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	97.82
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.8
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.8
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.79

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=1.2e-31  Score=207.98  Aligned_cols=95  Identities=24%  Similarity=0.361  Sum_probs=88.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||++++++|.+  ++.+|+|||||++|||.++|..    ...++|..++.|+.||+.||+|||++||+|||
T Consensus        84 ~il~~l~HpnIv~l~~~~~~--~~~~yivmEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD  157 (311)
T 4aw0_A           84 DVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRD  157 (311)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCeEEEEEEe--CCEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            66788899999999999987  5689999999999999999965    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       158 lKPeNILl~~~g~vKl~DFGl  178 (311)
T 4aw0_A          158 LKPENILLNEDMHIQITDFGT  178 (311)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHeEEcCCCCEEEEEcCC
Confidence            999999999999999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=2.1e-31  Score=209.69  Aligned_cols=98  Identities=30%  Similarity=0.457  Sum_probs=89.3

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++|||||++++++.+  ++.+|+|||||++|||.++|..  .+...++|.+++.|+.||+.||+|||++|||||
T Consensus        74 ~~il~~l~HpnIV~~~~~~~~--~~~~yiVmEy~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHR  149 (350)
T 4b9d_A           74 VAVLANMKHPNIVQYRESFEE--NGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDRKILHR  149 (350)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEET
T ss_pred             HHHHHHCCCCCCCcEEEEEEE--CCEEEEEEeCCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            367788999999999999976  5789999999999999999965  334568999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.+|++||+|||.
T Consensus       150 DlKp~NILl~~~g~vKl~DFGl  171 (350)
T 4b9d_A          150 DIKSQNIFLTKDGTVQLGDFGI  171 (350)
T ss_dssp             TCCGGGEEECTTCCEEECSTTE
T ss_pred             cCCHHHEEECCCCCEEEccccc
Confidence            9999999999999999999984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=5.5e-31  Score=204.03  Aligned_cols=97  Identities=24%  Similarity=0.284  Sum_probs=88.6

Q ss_pred             cccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      +..++..++||||+++++++.+  ++.+|+|||||++|||.++|..    ...+++..++.++.||+.||+|||++||+|
T Consensus        76 E~~il~~l~HpnIv~l~~~~~~--~~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiH  149 (304)
T 3ubd_A           76 ERDILVEVNHPFIVKLHYAFQT--EGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLGIIY  149 (304)
T ss_dssp             --CCCCCCCCTTEECEEEEEEE--TTEEEEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHCCCCCCCeEEEEEEE--CCEEEEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence            3477889999999999999986  5789999999999999999965    346999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.+|++||+|||.
T Consensus       150 RDlKp~NILl~~~g~vKl~DFGl  172 (304)
T 3ubd_A          150 RDLKPENILLDEEGHIKLTDFGL  172 (304)
T ss_dssp             SSCCGGGEEECTTSCEEEESSEE
T ss_pred             CCCCHHHeEEcCCCCEEeccccc
Confidence            99999999999999999999983

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=7.3e-31  Score=205.73  Aligned_cols=98  Identities=27%  Similarity=0.353  Sum_probs=89.4

Q ss_pred             CcccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        112 GVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       112 ~~~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      +++.++..++|||||++++++.+  ++.+|+|||||++|+|.++|+.    ...+++..+..|+.|++.||.|||++|||
T Consensus        99 ~E~~il~~l~HpnIV~l~~~~~~--~~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii  172 (336)
T 4g3f_A           99 EELVACAGLSSPRIVPLYGAVRE--GPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRIL  172 (336)
T ss_dssp             HHHHTTTTCCCTTBCCEEEEEEE--TTEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEEeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            34578889999999999999976  5689999999999999999965    34699999999999999999999999999


Q ss_pred             ccccchhhhhhhccc-eeecccccC
Q psy18117        192 HRGERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||||||+|||++.+| .+||+|||.
T Consensus       173 HRDlKp~NILl~~~g~~vKl~DFGl  197 (336)
T 4g3f_A          173 HGDVKADNVLLSSDGSRAALCDFGH  197 (336)
T ss_dssp             CSCCCGGGEEECTTSCCEEECCCTT
T ss_pred             ecccCHHHEEEeCCCCEEEEeeCCC
Confidence            999999999999998 699999984

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=3.8e-31  Score=207.99  Aligned_cols=95  Identities=20%  Similarity=0.354  Sum_probs=87.8

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++|||||+++++|.+  ++.+|+|||||++|+|.+++..     ..+++..++.++.||+.||+|||++|||||
T Consensus       122 i~il~~l~HpnIV~l~~~~~~--~~~~~ivmEy~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR  194 (346)
T 4fih_A          122 VVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHR  194 (346)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEE--TTEEEEEECCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHhCCCCCCCcEEEEEEE--CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            367788999999999999987  5689999999999999999853     359999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.+|++||+|||.
T Consensus       195 DlKp~NILl~~~g~vKl~DFGl  216 (346)
T 4fih_A          195 DIKSDSILLTHDGRVKLSDFGF  216 (346)
T ss_dssp             CCSGGGEEECTTCCEEECCCTT
T ss_pred             cCCHHHEEECCCCCEEEecCcC
Confidence            9999999999999999999984

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.95  E-value=3.2e-30  Score=199.86  Aligned_cols=99  Identities=21%  Similarity=0.287  Sum_probs=88.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH---------HhcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR---------QKKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      .++..++|||||++++++.+  ++.+++|||||++|+|.++|....         .....+++.++..++.|+++||.||
T Consensus        67 ~il~~l~HpnIV~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  144 (299)
T 4asz_A           67 ELLTNLQHEHIVKFYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL  144 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEECS--SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCccEEEEEee--CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            66788899999999999976  467899999999999999997532         1234699999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccceeecccccC
Q psy18117        186 HSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+++||||||||+|||+++++++||+|||.
T Consensus       145 H~~~iiHRDlKp~NILl~~~~~~Ki~DFGl  174 (299)
T 4asz_A          145 ASQHFVHRDLATRNCLVGENLLVKIGDFGM  174 (299)
T ss_dssp             HHTTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred             HhCCcccCccCHhhEEECCCCcEEECCccc
Confidence            999999999999999999999999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=1.2e-30  Score=209.83  Aligned_cols=95  Identities=20%  Similarity=0.354  Sum_probs=87.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++|||||+++++|.+  ++.+|+|||||++|+|.+++..     ..+++.+++.++.||+.||+|||++|||||
T Consensus       199 i~il~~l~HpnIV~l~~~~~~--~~~~~iVmEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~~IiHR  271 (423)
T 4fie_A          199 VVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHR  271 (423)
T ss_dssp             HHHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHhCCCCCCCceEEEEEE--CCEEEEEEeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence            356788999999999999987  5689999999999999999853     259999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.+|.+||+|||.
T Consensus       272 DiKp~NILl~~~g~vKl~DFGl  293 (423)
T 4fie_A          272 DIKSDSILLTHDGRVKLSDFGF  293 (423)
T ss_dssp             CCSTTTEEECTTCCEEECCCTT
T ss_pred             cCCHHHEEEcCCCCEEEecCcc
Confidence            9999999999999999999984

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=4.6e-30  Score=196.33  Aligned_cols=94  Identities=24%  Similarity=0.380  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++||||| +|+|.++|..    +..+++..++.++.||+.||+|||++||+|||
T Consensus        65 ~il~~l~HpnIv~~~~~~~~--~~~~~ivmEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD  137 (275)
T 3hyh_A           65 SYLRLLRHPHIIKLYDVIKS--KDEIIMVIEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRD  137 (275)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHHCCCCCCCeEEEEEEE--CCEEEEEEeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            56778899999999999987  56899999999 5699999854    45799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++++||+|||.
T Consensus       138 iKP~NILl~~~~~vkl~DFGl  158 (275)
T 3hyh_A          138 LKPENLLLDEHLNVKIADFGL  158 (275)
T ss_dssp             CCTTTEEECTTCCEEECCSSC
T ss_pred             CChHHeEECCCCCEEEeecCC
Confidence            999999999999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.95  E-value=8.1e-30  Score=197.87  Aligned_cols=95  Identities=15%  Similarity=0.217  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||||++++++..   +.+++|||||++|+|.++|..   .+..+++.++..++.|+++||.|||+++|||||
T Consensus        84 ~il~~l~HpNIV~l~g~~~~---~~~~iVmEy~~gGsL~~~l~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRD  157 (307)
T 3omv_A           84 AVLRKTRHVNILLFMGYMTK---DNLAIVTQWCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD  157 (307)
T ss_dssp             HHHTTCCCTTBCCEEEEECS---SSCEEEEECCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSC
T ss_pred             HHHHhCCCCCEeeEEEEEEC---CeEEEEEEcCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence            66788999999999998753   468999999999999999854   345699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++++||+|||.
T Consensus       158 lKp~NILl~~~~~~Ki~DFGl  178 (307)
T 3omv_A          158 MKSNNIFLHEGLTVKIGDFGL  178 (307)
T ss_dssp             CCSSSEEEETTEEEEECCCSS
T ss_pred             cCHHHEEECCCCcEEEeeccC
Confidence            999999999999999999984

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=8.2e-30  Score=196.47  Aligned_cols=98  Identities=27%  Similarity=0.359  Sum_probs=86.4

Q ss_pred             ccCCccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--
Q psy18117        114 LYSDKTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--  189 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--  189 (215)
                      +.+++.++|||||+++++|.+.  ....+++|||||++|+|.++|..    ...+++..++.|+.||+.||+|||+++  
T Consensus        76 ~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~  151 (290)
T 3fpq_A           76 AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPP  151 (290)
T ss_dssp             HHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred             HHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            3677889999999999998642  13458999999999999999965    346999999999999999999999998  


Q ss_pred             ccccccchhhhhhhc-cceeecccccC
Q psy18117        190 ILHRGERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      ||||||||+|||+++ +|.+||+|||.
T Consensus       152 IiHRDlKp~NILl~~~~g~vKl~DFGl  178 (290)
T 3fpq_A          152 IIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             CCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EEecccChhheeEECCCCCEEEEeCcC
Confidence            999999999999985 78999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=2.8e-29  Score=197.01  Aligned_cols=100  Identities=20%  Similarity=0.210  Sum_probs=88.1

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH-----------HhcCCchhHHHHHHHHHHHHHH
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR-----------QKKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~-----------~~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      +.++..++|||||++++++.+  ++.+++|||||++|+|.++|....           .....+++.++..++.|+++||
T Consensus        94 ~~il~~l~HpnIV~l~g~~~~--~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  171 (329)
T 4aoj_A           94 AELLTMLQHQHIVRFFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM  171 (329)
T ss_dssp             HHHHTTCCCTTBCCEEEEECS--SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCcEEEEEEE--CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence            367788999999999999976  467899999999999999986421           1234689999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||+++||||||||+|||+++++++||+|||.
T Consensus       172 ~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGl  204 (329)
T 4aoj_A          172 VYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGM  204 (329)
T ss_dssp             HHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred             HHHhcCCeecccccHhhEEECCCCcEEEccccc
Confidence            999999999999999999999999999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.94  E-value=4e-29  Score=193.88  Aligned_cols=100  Identities=21%  Similarity=0.284  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh----------HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ----------ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQY  184 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~----------~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~  184 (215)
                      .+++.++|||||+++++|...+..          .+|+|||||++|+|.+++..... ....++..++.++.||++||+|
T Consensus        55 ~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~y  133 (299)
T 4g31_A           55 KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEF  133 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHH
Confidence            567788999999999998653321          25899999999999999964211 0123445688999999999999


Q ss_pred             HHhCCccccccchhhhhhhccceeecccccC
Q psy18117        185 VHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       185 lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||++||+||||||+|||++.+|++||+|||.
T Consensus       134 lH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A          134 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             HHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence            9999999999999999999999999999984

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.94  E-value=3.2e-29  Score=195.00  Aligned_cols=99  Identities=22%  Similarity=0.282  Sum_probs=88.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH------------HhcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .++..++|||||++++++..  ++.+++|||||++|||.++|....            ..+..+++..+..++.|+++||
T Consensus        81 ~il~~l~HpNIV~l~g~~~~--~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl  158 (308)
T 4gt4_A           81 MLRARLQHPNVVCLLGVVTK--DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGM  158 (308)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCcceEEEE--CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHH
Confidence            56678899999999999976  467899999999999999996421            1134689999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||+++||||||||+|||+++++++||+|||.
T Consensus       159 ~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGl  191 (308)
T 4gt4_A          159 EYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL  191 (308)
T ss_dssp             HHHHHTTCCCSCCSGGGEEECGGGCEEECCSCC
T ss_pred             HHHHhCCCCCCCccccceEECCCCCEEECCccc
Confidence            999999999999999999999999999999984

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=3.2e-28  Score=204.56  Aligned_cols=95  Identities=21%  Similarity=0.236  Sum_probs=87.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++|||||+++++|.+  .+.+|+|||||+||||..+|..    ...+++..++.|+.||+.||+|||++||||||
T Consensus       244 ~ll~~~~HP~IV~l~~~f~~--~~~lylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRD  317 (689)
T 3v5w_A          244 SLVSTGDCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRD  317 (689)
T ss_dssp             HHHSSSCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHhhCCCCCEeEEEEEEEE--CCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            34567789999999999987  5689999999999999999965    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|++||+|||.
T Consensus       318 LKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          318 LKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CchHHeEEeCCCCEEecccce
Confidence            999999999999999999985

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.93  E-value=1.3e-27  Score=189.10  Aligned_cols=100  Identities=21%  Similarity=0.279  Sum_probs=85.7

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------------cCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------------~~~~~~~~~~~~~~ql~~~  181 (215)
                      .++..+. |||||+++++|... ++.+++|||||++|+|.++|......            +..+++..+..++.|+++|
T Consensus       119 ~il~~l~hhpnIV~l~g~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~g  197 (353)
T 4ase_A          119 KILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG  197 (353)
T ss_dssp             HHHHHHCCCTTBCCEEEEECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCcEEEEEEEEEec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHH
Confidence            4455564 59999999988653 35689999999999999999763321            2458899999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||+++||||||||+|||+++++++||+|||.
T Consensus       198 l~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGl  231 (353)
T 4ase_A          198 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGL  231 (353)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGG
T ss_pred             HHhHhhCCeecCccCccceeeCCCCCEEECcchh
Confidence            9999999999999999999999999999999984

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=6.8e-28  Score=187.52  Aligned_cols=96  Identities=20%  Similarity=0.242  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR----  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~----  188 (215)
                      .....++||||+++++++...+.  ..+++|||||++|+|.++|..     ..+++..+..++.|+++||.|||++    
T Consensus        49 ~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~  123 (303)
T 3hmm_A           49 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            44567899999999999875321  257999999999999999954     2589999999999999999999987    


Q ss_pred             ----CccccccchhhhhhhccceeecccccC
Q psy18117        189 ----RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ----~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                          +||||||||+|||++.++++||+|||.
T Consensus       124 ~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  154 (303)
T 3hmm_A          124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             TCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             cCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence                999999999999999999999999984

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=2.3e-27  Score=188.56  Aligned_cols=90  Identities=12%  Similarity=0.170  Sum_probs=81.7

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+ +||||++++++|.+  .+.+++|||||++|+|.+++.       .+++.+++.++.||+.||+|||++||+||||
T Consensus        73 l~~~~~h~nIv~l~~~~~~--~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~gIiHRDi  143 (361)
T 4f9c_A           73 LTVAGGQDNVMGVKYCFRK--NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFGIVHRDV  143 (361)
T ss_dssp             HHHTCSBTTBCCCSEEEEE--TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHhcCCCCCceEEEEEEE--CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcC
Confidence            3444 69999999999976  568999999999999999883       3899999999999999999999999999999


Q ss_pred             chhhhhhhcc-ceeecccccC
Q psy18117        196 RETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~-~~~ki~D~~~  215 (215)
                      ||+|||++.+ +.+||+|||.
T Consensus       144 KPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A          144 KPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             SGGGEEEETTTTEEEECCCTT
T ss_pred             CHHHeEEeCCCCeEEECcCCC
Confidence            9999999877 7999999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.6e-27  Score=191.41  Aligned_cols=97  Identities=24%  Similarity=0.395  Sum_probs=85.7

Q ss_pred             ccCCccCCCcchhhhhhhhcCC----chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        114 LYSDKTLHHPNIVELRSAFASR----SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~----~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      +.+++.++|||||++++++...    +.+.+|+|||||+ |+|.++|..    +..+++..++.++.||+.||.|||++|
T Consensus       104 i~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~~  178 (398)
T 4b99_A          104 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQ  178 (398)
T ss_dssp             HHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            3677888999999999987643    1357899999997 589999843    457999999999999999999999999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||||+|||++.+|.+||+|||.
T Consensus       179 iiHRDlKP~NIl~~~~~~~Ki~DFGl  204 (398)
T 4b99_A          179 VIHRDLKPSNLLVNENCELKIGDFGM  204 (398)
T ss_dssp             CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CcCCCcCccccccCCCCCEEEeecce
Confidence            99999999999999999999999984

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.91  E-value=1.4e-26  Score=194.08  Aligned_cols=92  Identities=11%  Similarity=-0.023  Sum_probs=80.9

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+ .|+||+++++++.+  ++..||||||++||+|.++|..    +..+++.   .++.||++||+|+|++|||||
T Consensus       293 ~~l~~~~~~~~i~~~~~~~ed--~~~~yLVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~GIIHR  363 (569)
T 4azs_A          293 KFLTQPPAGFDAPAVLAHGEN--AQSGWLVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQGFWHD  363 (569)
T ss_dssp             HHHHSCCTTCCCCCEEEEEEC--SSEEEEEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHTTCEES
T ss_pred             HHHHhcCCCCCeeEEEEEEEE--CCEEEEEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHCCceec
Confidence            445555 79999999999987  5789999999999999999954    3456554   589999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.+|++||+|||.
T Consensus       364 DIKPeNILL~~dg~vKL~DFGl  385 (569)
T 4azs_A          364 DVRPWNVMVDARQHARLIDFGS  385 (569)
T ss_dssp             CCCGGGEEECTTSCEEECCCTT
T ss_pred             cCchHhEEECCCCCEEEeeccc
Confidence            9999999999999999999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.91  E-value=1.9e-26  Score=193.22  Aligned_cols=96  Identities=20%  Similarity=0.320  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||++++++|.+  ++.+++|||||++|+|.++|..   ++..+++.+++.++.||++||.|||++||+|||
T Consensus       206 ~il~~l~hpnIv~l~~~~~~--~~~~~iv~E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRD  280 (573)
T 3uto_A          206 QTMSVLRHPTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD  280 (573)
T ss_dssp             HHHHHTCCTTBCCEEEEEEC--SSEEEEEEECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEE--CCEEEEEEeecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            56778899999999999987  5689999999999999998843   234699999999999999999999999999999


Q ss_pred             cchhhhhhhcc--ceeecccccC
Q psy18117        195 ERETFLSVLGD--CVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~--~~~ki~D~~~  215 (215)
                      |||+|||++.+  +.+||+|||.
T Consensus       281 lKp~Nill~~~~~~~vKl~DFG~  303 (573)
T 3uto_A          281 LKPENIMFTTKRSNELKLIDFGL  303 (573)
T ss_dssp             CCGGGEEESSSSCCCEEECCCSS
T ss_pred             CChhhccccCCCCCCEEEeeccc
Confidence            99999999865  7999999984

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.88  E-value=2.3e-24  Score=169.50  Aligned_cols=95  Identities=31%  Similarity=0.426  Sum_probs=86.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  .+.+++||||+++|+|.+++...    ..+++..++.++.|++.||.|||++||+|||
T Consensus        66 ~~l~~l~hpnIv~l~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD  139 (328)
T 3fe3_A           66 RIMKILNHPNIVKLFEVIET--EKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQKRIVHRD  139 (328)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEEE--CCEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence            45677889999999999876  56789999999999999998652    3599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       140 lkp~NIll~~~~~~kl~DFG~  160 (328)
T 3fe3_A          140 LKAENLLLDADMNIKIADFGF  160 (328)
T ss_dssp             CCGGGEEECTTSCEEECSTTC
T ss_pred             CCHHHEEEcCCCCEEEeeccC
Confidence            999999999999999999984

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.87  E-value=7.1e-24  Score=169.38  Aligned_cols=94  Identities=23%  Similarity=0.324  Sum_probs=85.8

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +.+.++||||+++++.+.+  .+.+++||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||
T Consensus        92 ll~~~~hp~Iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDl  165 (373)
T 2r5t_A           92 LLKNVKHPFLVGLHFSFQT--ADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDL  165 (373)
T ss_dssp             CBCCCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHHhCCCCCCCCEEEEEEe--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence            4567899999999999976  5689999999999999999865    235899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.+|.+||+|||.
T Consensus       166 kp~NIll~~~g~ikL~DFG~  185 (373)
T 2r5t_A          166 KPENILLDSQGHIVLTDFGL  185 (373)
T ss_dssp             CGGGEEECTTSCEEECCCCB
T ss_pred             CHHHEEECCCCCEEEeeCcc
Confidence            99999999999999999983

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.87  E-value=7.3e-24  Score=168.20  Aligned_cols=89  Identities=22%  Similarity=0.371  Sum_probs=82.5

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||||+++++.+.+  .+.+++||||+++|+|..++...    ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus        82 ~hp~Iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  155 (353)
T 3txo_A           82 NHPFLTQLFCCFQT--PDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNV  155 (353)
T ss_dssp             TCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             CCCceeeEEEEEEe--CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHE
Confidence            79999999999976  46799999999999999998652    3599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.+|.+||+|||.
T Consensus       156 Ll~~~g~ikL~DFG~  170 (353)
T 3txo_A          156 LLDHEGHCKLADFGM  170 (353)
T ss_dssp             EECTTSCEEECCCTT
T ss_pred             EECCCCCEEEccccc
Confidence            999999999999984

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.87  E-value=6.5e-24  Score=167.50  Aligned_cols=95  Identities=24%  Similarity=0.325  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||.|||++||+|||
T Consensus        57 ~~l~~l~hp~iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  130 (337)
T 1o6l_A           57 RVLQNTRHPFLTALKYAFQT--HDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRD  130 (337)
T ss_dssp             HHHHSCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHhCCCCcCcceEEEEEe--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence            44567789999999999976  4679999999999999999864    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       131 lkp~NIll~~~g~vkL~DFG~  151 (337)
T 1o6l_A          131 IKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999984

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.87  E-value=1.1e-23  Score=169.34  Aligned_cols=90  Identities=27%  Similarity=0.402  Sum_probs=83.1

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||||+++++++.+  .+.+++||||+++|+|..++..    ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus       110 ~~hp~Iv~l~~~~~~--~~~~~lV~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~N  183 (396)
T 4dc2_A          110 SNHPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN  183 (396)
T ss_dssp             TTCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             CCCCCcCeeEEEEEE--CCEEEEEEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence            489999999999976  5689999999999999999865    2369999999999999999999999999999999999


Q ss_pred             hhhhccceeecccccC
Q psy18117        200 LSVLGDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~~ki~D~~~  215 (215)
                      ||++.+|.+||+|||.
T Consensus       184 ILl~~~g~ikL~DFGl  199 (396)
T 4dc2_A          184 VLLDSEGHIKLTDYGM  199 (396)
T ss_dssp             EEECTTSCEEECCCTT
T ss_pred             EEECCCCCEEEeecce
Confidence            9999999999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.87  E-value=3.8e-24  Score=174.08  Aligned_cols=96  Identities=19%  Similarity=0.217  Sum_probs=87.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++..|.+  .+.+++||||+++|+|.+++..   .+..+++..++.++.|++.||.|||++||+|||
T Consensus       126 ~il~~~~hp~Iv~l~~~~~~--~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrD  200 (437)
T 4aw2_A          126 DVLVNGDSKWITTLHYAFQD--DNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRD  200 (437)
T ss_dssp             HHHHHSCTTTBCCEEEEEEC--SSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEEEEEEEEee--CCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence            45567899999999999976  5689999999999999999854   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       201 LKp~NILl~~~g~vkL~DFGl  221 (437)
T 4aw2_A          201 IKPDNILMDMNGHIRLADFGS  221 (437)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             cCHHHeeEcCCCCEEEcchhh
Confidence            999999999999999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.87  E-value=6.3e-24  Score=168.49  Aligned_cols=99  Identities=27%  Similarity=0.410  Sum_probs=87.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++.+++|||||++|+|.+++.........+++..++.++.||++||.|||++||+|||
T Consensus        78 ~~l~~l~hpnIv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrD  155 (351)
T 3c0i_A           78 SICHMLKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD  155 (351)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCcEEEEEEe--CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            45667889999999999876  5678999999999999999877655555689999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeecccccC
Q psy18117        195 ERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |||+|||++.++   .+||+|||.
T Consensus       156 lkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          156 VKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             CSGGGEEECSSSTTCCEEECCCTT
T ss_pred             CChHHeEEecCCCCCcEEEecCcc
Confidence            999999998765   499999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.87  E-value=8.7e-24  Score=165.55  Aligned_cols=95  Identities=17%  Similarity=0.339  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  .+.+++||||+++|+|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        58 ~~l~~l~hp~Iv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  131 (318)
T 1fot_A           58 LMLSIVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD  131 (318)
T ss_dssp             HHHHSCCBTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHhhCCCCCCceEeEEEEe--CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            44567789999999999876  5689999999999999999864    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       132 lkp~NIll~~~g~~kL~Dfg~  152 (318)
T 1fot_A          132 LKPENILLDKNGHIKITDFGF  152 (318)
T ss_dssp             CCGGGEEECTTSCEEECCCSS
T ss_pred             CChheEEEcCCCCEEEeecCc
Confidence            999999999999999999984

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.87  E-value=3.2e-24  Score=173.26  Aligned_cols=94  Identities=20%  Similarity=0.267  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  .+.+++|||||++|+|.+++..     ..+++..++.++.||+.||.|||++||+|||
T Consensus       121 ~il~~l~hp~Iv~l~~~~~~--~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~givHrD  193 (410)
T 3v8s_A          121 DIMAFANSPWVVQLFYAFQD--DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRD  193 (410)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEE--CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            55677899999999999976  5689999999999999999853     2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       194 LKp~NILl~~~g~ikL~DFG~  214 (410)
T 3v8s_A          194 VKPDNMLLDKSGHLKLADFGT  214 (410)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHeeECCCCCEEEeccce
Confidence            999999999999999999984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.87  E-value=6.3e-24  Score=171.66  Aligned_cols=96  Identities=19%  Similarity=0.184  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++..+.+  .+.+++||||+++|+|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus       113 ~il~~~~hp~Iv~l~~~~~~--~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrD  187 (412)
T 2vd5_A          113 DVLVNGDRRWITQLHFAFQD--ENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLGYVHRD  187 (412)
T ss_dssp             HHHHHSCTTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhcCCCCeeeEEEEEee--CCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            45567889999999999976  56899999999999999999653   23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|++||+|||.
T Consensus       188 LKp~NILld~~g~vkL~DFGl  208 (412)
T 2vd5_A          188 IKPDNILLDRCGHIRLADFGS  208 (412)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             cCHHHeeecCCCCEEEeechh
Confidence            999999999999999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.87  E-value=1.3e-23  Score=166.33  Aligned_cols=90  Identities=23%  Similarity=0.366  Sum_probs=83.0

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||||+++++.+.+  .+.+++||||+++|+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus        75 ~~hp~iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  148 (345)
T 1xjd_A           75 WEHPFLTHMFCTFQT--KENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN  148 (345)
T ss_dssp             TTCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             CCCCCCCcEEEEEEe--CCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhh
Confidence            489999999999976  46799999999999999998652    359999999999999999999999999999999999


Q ss_pred             hhhhccceeecccccC
Q psy18117        200 LSVLGDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~~ki~D~~~  215 (215)
                      ||++.+|.+||+|||.
T Consensus       149 Ill~~~g~vkL~DFG~  164 (345)
T 1xjd_A          149 ILLDKDGHIKIADFGM  164 (345)
T ss_dssp             EEECTTSCEEECCCTT
T ss_pred             EEECCCCCEEEeEChh
Confidence            9999999999999984

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.86  E-value=1.4e-23  Score=166.42  Aligned_cols=95  Identities=19%  Similarity=0.270  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  .+.+++||||+++|+|.+++...    ..+++..++.++.||+.||.|||++||+|||
T Consensus        93 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD  166 (350)
T 1rdq_E           93 RILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD  166 (350)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEc--CCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45667799999999999876  46799999999999999999652    3599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       167 lkp~NIll~~~g~~kL~DFg~  187 (350)
T 1rdq_E          167 LKPENLLIDQQGYIQVTDFGF  187 (350)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CccceEEECCCCCEEEccccc
Confidence            999999999999999999984

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.86  E-value=2.1e-23  Score=166.16  Aligned_cols=95  Identities=17%  Similarity=0.133  Sum_probs=84.4

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-KKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...|+|++.+++.+..  ++..++|||||++|+|.+++..... ....+++..++.++.|++.||.|||++||+||||||
T Consensus       123 ~~~~~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp  200 (365)
T 3e7e_A          123 PSMQHMFMKFYSAHLF--QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKP  200 (365)
T ss_dssp             GGGGGGBCCEEEEEEC--SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSG
T ss_pred             hhhhhhhhhhheeeec--CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCH
Confidence            4458999999999876  4678999999999999999976543 244699999999999999999999999999999999


Q ss_pred             hhhhhhc-----------cceeecccccC
Q psy18117        198 TFLSVLG-----------DCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~-----------~~~~ki~D~~~  215 (215)
                      +|||++.           ++.+||+|||.
T Consensus       201 ~NIll~~~~~~~~~~~~~~~~~kl~DFG~  229 (365)
T 3e7e_A          201 DNFILGNGFLEQDDEDDLSAGLALIDLGQ  229 (365)
T ss_dssp             GGEEECGGGTCC------CTTEEECCCTT
T ss_pred             HHEEecccccCccccccccCCEEEeeCch
Confidence            9999998           89999999984

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.86  E-value=1.3e-23  Score=168.41  Aligned_cols=95  Identities=23%  Similarity=0.391  Sum_probs=86.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  .+.+++||||+.+|+|..++..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        67 ~il~~l~hp~Iv~l~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrD  140 (384)
T 4fr4_A           67 QIMQGLEHPFLVNLWYSFQD--EEDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQRIIHRD  140 (384)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEEEEEEe--CCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            45667789999999999976  4678999999999999999854    44699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       141 lkp~NIll~~~g~vkL~DFG~  161 (384)
T 4fr4_A          141 MKPDNILLDEHGHVHITDFNI  161 (384)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CcHHHeEECCCCCEEEeccce
Confidence            999999999999999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.86  E-value=2.9e-23  Score=164.35  Aligned_cols=90  Identities=27%  Similarity=0.402  Sum_probs=82.8

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||||+++++++.+  .+.+++||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        67 ~~hp~iv~l~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N  140 (345)
T 3a8x_A           67 SNHPFLVGLHSCFQT--ESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN  140 (345)
T ss_dssp             TTCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             CCCCccCeEEEEEEe--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence            379999999999876  4689999999999999999865    2369999999999999999999999999999999999


Q ss_pred             hhhhccceeecccccC
Q psy18117        200 LSVLGDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~~ki~D~~~  215 (215)
                      ||++.+|.+||+|||.
T Consensus       141 Ill~~~g~~kL~DFG~  156 (345)
T 3a8x_A          141 VLLDSEGHIKLTDYGM  156 (345)
T ss_dssp             EEECTTSCEEECCGGG
T ss_pred             EEECCCCCEEEEeccc
Confidence            9999999999999983

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.86  E-value=3.4e-23  Score=169.19  Aligned_cols=96  Identities=22%  Similarity=0.297  Sum_probs=86.2

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILH  192 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H  192 (215)
                      ..++..++||||+++++.+..  .+.+++||||+++|+|.+++..    ...+++..++.++.||+.||.|||+ +||+|
T Consensus       199 ~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiH  272 (446)
T 4ejn_A          199 NRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVY  272 (446)
T ss_dssp             --CCCCCSCTTSCCEEEEEEE--TTEEEEEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHhCCCCeEeeEEEEEee--CCEEEEEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence            367788899999999999876  4678999999999999999865    2369999999999999999999998 99999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       273 rDlkp~NIll~~~~~~kl~DFG~  295 (446)
T 4ejn_A          273 RDLKLENLMLDKDGHIKITDFGL  295 (446)
T ss_dssp             CCCCGGGEEECSSSCEEECCCCC
T ss_pred             CCCCHHHEEECCCCCEEEccCCC
Confidence            99999999999999999999984

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.86  E-value=2.4e-23  Score=161.30  Aligned_cols=95  Identities=19%  Similarity=0.219  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  ++..++||||+++|+|.+++...    ..+++..++.++.|+++||.|||++||+|||
T Consensus        63 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D  136 (294)
T 4eqm_A           63 HNSSQLSHQNIVSMIDVDEE--DDCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDMRIVHRD  136 (294)
T ss_dssp             HHHTTCCBTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHhcCCCCCCceEEEeeee--CCeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567789999999999876  56789999999999999999652    3699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       137 lkp~Nil~~~~~~~kl~Dfg~  157 (294)
T 4eqm_A          137 IKPQNILIDSNKTLKIFDFGI  157 (294)
T ss_dssp             CCGGGEEECTTSCEEECCCSS
T ss_pred             CCHHHEEECCCCCEEEEeCCC
Confidence            999999999999999999983

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.86  E-value=1.3e-23  Score=168.72  Aligned_cols=96  Identities=23%  Similarity=0.312  Sum_probs=86.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ++.+++||||+++|+|.+++...  ....+++..++.++.||+.||.|||++||+|||
T Consensus        78 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  153 (389)
T 3gni_B           78 HVSKLFNHPNIVPYRATFIA--DNELWVVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHHMGYVHRS  153 (389)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEeEEEEE--CCEEEEEEEccCCCCHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            55677889999999999876  56899999999999999998652  234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       154 lkp~NIll~~~~~~kl~dfg  173 (389)
T 3gni_B          154 VKASHILISVDGKVYLSGLR  173 (389)
T ss_dssp             CSGGGEEECTTCCEEECCGG
T ss_pred             CCHHHEEEcCCCCEEEcccc
Confidence            99999999999999999996

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.86  E-value=1.1e-23  Score=163.36  Aligned_cols=94  Identities=23%  Similarity=0.366  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ++..++||||+++|+|.+++..     ..+++..++.++.|++.||.|||++||+|||
T Consensus        69 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D  141 (297)
T 3fxz_A           69 LVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (297)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHhcCCCCCCCeEeEEEEE--CCEEEEEEECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCceeCC
Confidence            44567889999999999876  5678999999999999999854     2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       142 lkp~Nil~~~~~~~kl~Dfg~  162 (297)
T 3fxz_A          142 IKSDNILLGMDGSVKLTDFGF  162 (297)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEeeCCC
Confidence            999999999999999999983

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.86  E-value=3.3e-23  Score=164.42  Aligned_cols=89  Identities=21%  Similarity=0.315  Sum_probs=82.4

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||+|+++++.+.+  .+.+++||||+++|+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus        79 ~hp~iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  152 (353)
T 2i0e_A           79 KPPFLTQLHSCFQT--MDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV  152 (353)
T ss_dssp             CCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             CCCEEeeEEEEEEc--CCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHE
Confidence            79999999999876  46899999999999999998652    3599999999999999999999999999999999999


Q ss_pred             hhhccceeecccccC
Q psy18117        201 SVLGDCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~~ki~D~~~  215 (215)
                      |++.+|.+||+|||.
T Consensus       153 ll~~~g~vkL~DFG~  167 (353)
T 2i0e_A          153 MLDSEGHIKIADFGM  167 (353)
T ss_dssp             EECTTSCEEECCCTT
T ss_pred             EEcCCCcEEEEeCCc
Confidence            999999999999984

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.86  E-value=1.1e-23  Score=162.98  Aligned_cols=98  Identities=21%  Similarity=0.288  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++...+...+++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        63 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  139 (295)
T 3ugc_A           63 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKRYIHRD  139 (295)
T ss_dssp             HHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            456677899999999987653334578999999999999999653   23489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       140 ikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A          140 LATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             CSGGGEEEEETTEEEECCCCS
T ss_pred             CCHhhEEEcCCCeEEEccCcc
Confidence            999999999999999999984

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.86  E-value=2.5e-23  Score=163.35  Aligned_cols=96  Identities=20%  Similarity=0.295  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ++..++||||+++|+|.+++..   ....+++..+..++.|++.||.|||++||+|||
T Consensus       102 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  176 (325)
T 3kul_A          102 SIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRD  176 (325)
T ss_dssp             HHHTTCCCTTBCCEEEEECG--GGCCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCcEEEEEEe--CCccEEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            45667789999999999865  5678999999999999999854   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       177 lkp~NIll~~~~~~kl~Dfg~  197 (325)
T 3kul_A          177 LAARNVLVDSNLVCKVSDFGL  197 (325)
T ss_dssp             CSGGGEEECTTCCEEECCCSS
T ss_pred             CCcceEEECCCCCEEECCCCc
Confidence            999999999999999999984

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.86  E-value=2.7e-23  Score=166.37  Aligned_cols=96  Identities=24%  Similarity=0.302  Sum_probs=86.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  .+.+++||||+++|+|.+++....   ..+++..+..++.|+++||.|||++||+|||
T Consensus       164 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  238 (377)
T 3cbl_A          164 RILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKCCIHRD  238 (377)
T ss_dssp             HHHTTCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEEEEEEEEec--CCCcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcc
Confidence            56678899999999999875  467899999999999999997532   3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       239 lkp~Nil~~~~~~~kl~DfG~  259 (377)
T 3cbl_A          239 LAARNCLVTEKNVLKISDFGM  259 (377)
T ss_dssp             CSGGGEEECTTCCEEECCGGG
T ss_pred             cCHHHEEEcCCCcEEECcCCC
Confidence            999999999999999999983

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.85  E-value=2.5e-23  Score=165.58  Aligned_cols=95  Identities=24%  Similarity=0.386  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+  ...+++||||+++|+|.+++..    +..+++..+..++.||+.||.|||++||+|||
T Consensus        67 ~il~~l~hpnIv~l~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  140 (361)
T 2yab_A           67 SILRQVLHPNIITLHDVYEN--RTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (361)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCcCCCcEEEEEEe--CCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45667789999999999976  4678999999999999999843    45799999999999999999999999999999


Q ss_pred             cchhhhhhhccc----eeecccccC
Q psy18117        195 ERETFLSVLGDC----VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~----~~ki~D~~~  215 (215)
                      |||+|||++.++    .+||+|||.
T Consensus       141 lkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A          141 LKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             CSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             CCHHHEEEeCCCCCccCEEEEecCC
Confidence            999999998877    799999984

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.85  E-value=2.5e-23  Score=166.17  Aligned_cols=99  Identities=21%  Similarity=0.283  Sum_probs=85.9

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~  181 (215)
                      .+++.+ +||||+++++.+..  .+.+++||||+++|+|.+++.....            ....+++..+..++.||+.|
T Consensus       138 ~~l~~l~~hpnIv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~a  215 (370)
T 2psq_A          138 EMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG  215 (370)
T ss_dssp             HHHHHSCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCEeeEEEEEcc--CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            445566 89999999999876  5679999999999999999975321            11347889999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||++||+||||||+|||++.++.+||+|||.
T Consensus       216 L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  249 (370)
T 2psq_A          216 MEYLASQKCIHRDLAARNVLVTENNVMKIADFGL  249 (370)
T ss_dssp             HHHHHHTTEECSCCCGGGEEECTTCCEEECCCSS
T ss_pred             HHHHHhCCeeccccchhhEEECCCCCEEEccccC
Confidence            9999999999999999999999999999999984

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.85  E-value=1.6e-23  Score=164.64  Aligned_cols=95  Identities=23%  Similarity=0.334  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+.+++||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+|||
T Consensus        73 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~D  146 (327)
T 3a62_A           73 NILEEVKHPFIVDLIYAFQT--GGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQKGIIYRD  146 (327)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSCEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCCCccceeEEEEc--CCEEEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEccc
Confidence            55677889999999999876  5688999999999999999865    23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       147 lkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A          147 LKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             CCTTTEEECTTSCEEECCCSC
T ss_pred             CCHHHeEECCCCcEEEEeCCc
Confidence            999999999999999999983

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.85  E-value=2.9e-23  Score=161.83  Aligned_cols=96  Identities=21%  Similarity=0.275  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ++..++||||+++|+|.+++...   ...+++..+..++.|+++||.|||++||+|||
T Consensus        59 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~d  133 (310)
T 3s95_A           59 KVMRCLEHPNVLKFIGVLYK--DKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD  133 (310)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCcCcccEEEEEec--CCeeEEEEEecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            45567789999999999876  56789999999999999999652   34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       134 lkp~Nil~~~~~~~kl~Dfg~  154 (310)
T 3s95_A          134 LNSHNCLVRENKNVVVADFGL  154 (310)
T ss_dssp             CSTTSEEECTTSCEEECCCTT
T ss_pred             CCcCeEEECCCCCEEEeeccc
Confidence            999999999999999999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.9e-23  Score=163.77  Aligned_cols=96  Identities=26%  Similarity=0.295  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.+  .+.+++|||||++|+|.+++..   ....+++..++.++.|+++||.|||++||+|||
T Consensus        53 ~~l~~l~hpnIv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~givH~D  127 (321)
T 1tki_A           53 SILNIARHRNILHLHESFES--MEELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSHNIGHFD  127 (321)
T ss_dssp             HHHHHSCCTTBCCEEEEEEE--TTEEEEEECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEeEEEec--CCEEEEEEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence            45567789999999999876  5689999999999999999843   234699999999999999999999999999999


Q ss_pred             cchhhhhhhc--cceeecccccC
Q psy18117        195 ERETFLSVLG--DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~--~~~~ki~D~~~  215 (215)
                      |||+|||++.  ++.+||+|||.
T Consensus       128 lkp~NIl~~~~~~~~~kl~Dfg~  150 (321)
T 1tki_A          128 IRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             CCGGGEEESSSSCCCEEECCCTT
T ss_pred             CCHHHEEEccCCCCCEEEEECCC
Confidence            9999999987  78999999984

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.85  E-value=2.6e-23  Score=172.97  Aligned_cols=99  Identities=23%  Similarity=0.264  Sum_probs=88.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++..+..  ...+++||||+++|+|..++......+..+++..++.++.||+.||.|||++||+|||
T Consensus       237 ~iL~~l~hp~Iv~l~~~~~~--~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrD  314 (543)
T 3c4z_A          237 KILAKVHSRFIVSLAYAFET--KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRD  314 (543)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhcCCCCEeeEEEEEee--CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence            45567899999999999876  4679999999999999999865433345699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       315 LKP~NILl~~~g~vkL~DFGl  335 (543)
T 3c4z_A          315 LKPENVLLDDDGNVRISDLGL  335 (543)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CChHHEEEeCCCCEEEeecce
Confidence            999999999999999999984

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.85  E-value=3.8e-23  Score=168.66  Aligned_cols=95  Identities=21%  Similarity=0.286  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++|||||++|+|.+.+..    +..+++..+..++.||++||.|||++||+|||
T Consensus        62 ~il~~l~hpnIv~l~~~~~~--~~~~~lv~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~givHrD  135 (444)
T 3soa_A           62 RICRLLKHPNIVRLHDSISE--EGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQMGVVHRN  135 (444)
T ss_dssp             HHHHHCCBTTBCCEEEEEEC--SSEEEEEECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHhCCCcCCCeEEEEEEE--CCEEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            55677899999999999876  5688999999999999999864    45699999999999999999999999999999


Q ss_pred             cchhhhhhhc---cceeecccccC
Q psy18117        195 ERETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~---~~~~ki~D~~~  215 (215)
                      |||+|||++.   ++.+||+|||.
T Consensus       136 lKp~NIll~~~~~~~~vkL~DFG~  159 (444)
T 3soa_A          136 LKPENLLLASKLKGAAVKLADFGL  159 (444)
T ss_dssp             CSSTTEEESBSSTTCCEEECCCSS
T ss_pred             CCHHHEEEeccCCCCcEEEccCce
Confidence            9999999984   57899999984

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.85  E-value=3.7e-23  Score=161.23  Aligned_cols=99  Identities=23%  Similarity=0.323  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------------hcCCchhHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------------KKCHLAECLVWSY  174 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------------~~~~~~~~~~~~~  174 (215)
                      .++..++||||+++++.+..  .+..++||||+++|+|.+++.....                    ....+++..++.+
T Consensus        78 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  155 (314)
T 2ivs_A           78 NVLKQVNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISF  155 (314)
T ss_dssp             HHHTTCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHH
T ss_pred             HHHhhCCCCceeeEEEEEec--CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHH
Confidence            45567789999999999876  4678999999999999999976321                    1234889999999


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        175 FRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       175 ~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|+++||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       156 ~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~  196 (314)
T 2ivs_A          156 AWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL  196 (314)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTT
T ss_pred             HHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccc
Confidence            99999999999999999999999999999999999999983

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.85  E-value=3.4e-23  Score=165.59  Aligned_cols=96  Identities=19%  Similarity=0.318  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  .+..++||||+++|+|.+++..   ....+++..+..++.|++.||.|||++||+|||
T Consensus        98 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  172 (373)
T 2qol_A           98 SIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRD  172 (373)
T ss_dssp             HHHTTCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCCCeEEEEEee--CCceEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCC
Confidence            45667789999999999876  4678999999999999999864   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       173 lkp~NIll~~~~~~kl~Dfg~  193 (373)
T 2qol_A          173 LAARNILINSNLVCKVSDFGL  193 (373)
T ss_dssp             CCGGGEEECTTCCEEECCC--
T ss_pred             CCcceEEEcCCCCEEECcCcc
Confidence            999999999999999999983

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.85  E-value=3.9e-23  Score=163.05  Aligned_cols=99  Identities=23%  Similarity=0.276  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------------hcCCchhHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------------KKCHLAECLVWSY  174 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------------~~~~~~~~~~~~~  174 (215)
                      .++..++||||+++++++..  ++..++||||+++|+|.+++.....                    ....+++..++.+
T Consensus       102 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  179 (343)
T 1luf_A          102 ALMAEFDNPNIVKLLGVCAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI  179 (343)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHH
T ss_pred             HHHHhCCCCCEEEEEEEEcc--CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHH
Confidence            45667789999999999876  5678999999999999999975311                    1146899999999


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        175 FRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       175 ~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|+++||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       180 ~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  220 (343)
T 1luf_A          180 ARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL  220 (343)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred             HHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCC
Confidence            99999999999999999999999999999999999999984

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.85  E-value=6.5e-23  Score=159.96  Aligned_cols=97  Identities=16%  Similarity=0.229  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .....++||||+++++.+.....  ...++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|
T Consensus        64 ~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH  139 (311)
T 3ork_A           64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGIIH  139 (311)
T ss_dssp             TTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence            55677899999999998765321  124899999999999999965    236999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       140 ~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A          140 RDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             CCCCGGGEEEETTSCEEECCCSC
T ss_pred             CCCCHHHEEEcCCCCEEEeeccC
Confidence            99999999999999999999984

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.85  E-value=3.4e-23  Score=170.16  Aligned_cols=95  Identities=21%  Similarity=0.360  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  .+.+++||||+++|+|.+++..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        68 ~~l~~l~HpnIv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  141 (476)
T 2y94_A           68 QNLKLFRHPHIIKLYQVIST--PSDIFMVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRD  141 (476)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred             HHHHhCCCCCCCcEEEEEEE--CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Confidence            45677889999999999876  4678999999999999999843    45699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       142 Lkp~NIll~~~~~vkL~DFG~  162 (476)
T 2y94_A          142 LKPENVLLDAHMNAKIADFGL  162 (476)
T ss_dssp             CSGGGEEECTTCCEEECCCSS
T ss_pred             ccHHHEEEecCCCeEEEeccc
Confidence            999999999999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.85  E-value=5.1e-23  Score=171.87  Aligned_cols=97  Identities=22%  Similarity=0.251  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++..+.+  .+.+++||||+++|+|.+++...  ....+++..++.++.||+.||.|||++||+|||
T Consensus       236 ~iL~~l~hp~Iv~l~~~~~~--~~~l~lVmEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrD  311 (576)
T 2acx_A          236 QILEKVNSRFVVSLAYAYET--KDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRERIVYRD  311 (576)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHcCCCCEeeEEEEEee--CCEEEEEEEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence            45667899999999999876  46899999999999999998642  223499999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       312 LKPeNILld~~g~vKL~DFGl  332 (576)
T 2acx_A          312 LKPENILLDDHGHIRISDLGL  332 (576)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CchheEEEeCCCCeEEEeccc
Confidence            999999999999999999984

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.85  E-value=8.9e-23  Score=157.31  Aligned_cols=99  Identities=22%  Similarity=0.366  Sum_probs=88.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++||||+++|+|.+++.........+++..++.++.|++.||.|||++||+|||
T Consensus        72 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~d  149 (285)
T 3is5_A           72 EVLKSLDHPNIIKIFEVFED--YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKD  149 (285)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCchHHhHHHheec--CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECC
Confidence            45567789999999999876  4678999999999999999977655566799999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeecccccC
Q psy18117        195 ERETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~~  215 (215)
                      |||+|||+   +.++.+||+|||.
T Consensus       150 ikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A          150 LKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             CSGGGEEESSSSTTCCEEECCCCC
T ss_pred             CCHHHEEEecCCCCCCEEEEeeec
Confidence            99999999   4457899999984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.84  E-value=6e-23  Score=169.78  Aligned_cols=97  Identities=20%  Similarity=0.355  Sum_probs=86.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ...+++||||+++|+|.+++...  .+..+++..+..++.|++.||.|||++||+|||
T Consensus       268 ~~l~~l~hpniv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrD  343 (495)
T 1opk_A          268 AVMKEIKHPNLVQLLGVCTR--EPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN  343 (495)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCEeeEEEEEec--CCcEEEEEEccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            45667899999999999876  46789999999999999999652  234589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       344 lkp~NIll~~~~~~kl~DFG~  364 (495)
T 1opk_A          344 LAARNCLVGENHLVKVADFGL  364 (495)
T ss_dssp             CSGGGEEECGGGCEEECCTTC
T ss_pred             CChhhEEECCCCcEEEeeccc
Confidence            999999999999999999984

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.84  E-value=3.9e-23  Score=162.90  Aligned_cols=90  Identities=18%  Similarity=0.130  Sum_probs=78.2

Q ss_pred             CCcchhhhhhhhcCC-----------chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH-hC
Q psy18117        121 HHPNIVELRSAFASR-----------SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH-SR  188 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~-----------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~  188 (215)
                      .||||+++++.+...           +.+.+++|||||++|++.+.+..     ..+++..++.++.||+.||.||| ++
T Consensus       107 ~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~  181 (336)
T 2vuw_A          107 YPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTASLAVAEASL  181 (336)
T ss_dssp             CCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            389999999998741           14678999999999977666522     35899999999999999999999 99


Q ss_pred             Cccccccchhhhhhhccc--------------------eeecccccC
Q psy18117        189 RILHRGERETFLSVLGDC--------------------VRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~--------------------~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++                    .+||+|||.
T Consensus       182 ~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~  228 (336)
T 2vuw_A          182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTL  228 (336)
T ss_dssp             CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTT
T ss_pred             CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccc
Confidence            999999999999999887                    999999984

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.84  E-value=1.5e-22  Score=155.63  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=82.5

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +||||+++++.+..  .+..++||||+++|+|.+++.........+++..++.++.|++.||.|||++||+||||||+||
T Consensus        69 ~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NI  146 (289)
T 1x8b_A           69 QHSHVVRYFSAWAE--DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI  146 (289)
T ss_dssp             SCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             CCCCeeeeeeeeec--CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHE
Confidence            89999999999876  5678999999999999999987665556799999999999999999999999999999999999


Q ss_pred             hhhccc-------------------eeecccccC
Q psy18117        201 SVLGDC-------------------VRTVSEQAK  215 (215)
Q Consensus       201 l~~~~~-------------------~~ki~D~~~  215 (215)
                      |++.++                   .+||+|||.
T Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  180 (289)
T 1x8b_A          147 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH  180 (289)
T ss_dssp             EEC--------------------CCCEEECCCTT
T ss_pred             EEcCCCCCcccccccccccccCCceEEEEccccc
Confidence            998544                   799999983

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.84  E-value=9.2e-23  Score=162.38  Aligned_cols=95  Identities=23%  Similarity=0.368  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++||||+++++++..  .+.+++||||+++|+|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        68 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~D  141 (361)
T 3uc3_A           68 INHRSLRHPNIVRFKEVILT--PTHLAIIMEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRD  141 (361)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred             HHHHhCCCCCCCcEEEEEee--CCEEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44567789999999999976  4678999999999999999865    23599999999999999999999999999999


Q ss_pred             cchhhhhhhccce--eecccccC
Q psy18117        195 ERETFLSVLGDCV--RTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~--~ki~D~~~  215 (215)
                      |||+|||++.++.  +||+|||.
T Consensus       142 lkp~Nill~~~~~~~~kl~Dfg~  164 (361)
T 3uc3_A          142 LKLENTLLDGSPAPRLKICDFGY  164 (361)
T ss_dssp             CCGGGEEECSSSSCCEEECCCCC
T ss_pred             CCHHHEEEcCCCCceEEEeecCc
Confidence            9999999987765  99999983

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.84  E-value=1e-22  Score=157.04  Aligned_cols=96  Identities=18%  Similarity=0.204  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++++..  ++..++||||+++|+|.+++...   +..+++..++.++.|+++||.|||++||+|||
T Consensus        64 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  138 (289)
T 4fvq_A           64 SMMSKLSHKHLVLNYGVCVC--GDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEENTLIHGN  138 (289)
T ss_dssp             HHHHTSCCTTBCCEEEEECC--TTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCCCEeEEEEEEEe--CCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCC
Confidence            45567789999999999876  56788999999999999999653   23489999999999999999999999999999


Q ss_pred             cchhhhhhhccce--------eecccccC
Q psy18117        195 ERETFLSVLGDCV--------RTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~--------~ki~D~~~  215 (215)
                      |||+|||++.++.        +||+|||.
T Consensus       139 lkp~NIll~~~~~~~~~~~~~~kl~Dfg~  167 (289)
T 4fvq_A          139 VCAKNILLIREEDRKTGNPPFIKLSDPGI  167 (289)
T ss_dssp             CCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred             cCcceEEEecCCcccccccceeeeccCcc
Confidence            9999999998886        99999983

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.84  E-value=6.5e-23  Score=168.04  Aligned_cols=96  Identities=26%  Similarity=0.369  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++....   ...+++||||+.+ +|.+++..    ...+++..++.++.||+.||.|||++||+
T Consensus       104 ~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ii  178 (458)
T 3rp9_A          104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAGIL  178 (458)
T ss_dssp             HHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHhCCCCCCCceEEEEecCCcccCceEEEEEecccc-chhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcC
Confidence            5667789999999999985432   2468999999875 99998843    44699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       179 HrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          179 HRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCCChhhEEECCCCCEeeccccc
Confidence            999999999999999999999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.84  E-value=6e-23  Score=159.24  Aligned_cols=98  Identities=20%  Similarity=0.267  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.......+++||||+++|+|.+++...   ...+++..++.++.|++.||.|||++||+|||
T Consensus        75 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  151 (302)
T 4e5w_A           75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSRQYVHRD  151 (302)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcCCcccCC
Confidence            455677899999999998764445688999999999999999653   33599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       152 ikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A          152 LAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             CSGGGEEEEETTEEEECCCTT
T ss_pred             CchheEEEcCCCCEEECcccc
Confidence            999999999999999999984

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=1.4e-22  Score=162.00  Aligned_cols=97  Identities=18%  Similarity=0.215  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++... ++..++||||+++|+|.+++..   ....+++..+..++.|+++||.|||++||+|||
T Consensus       142 ~il~~l~hpnIv~~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD  217 (373)
T 3c1x_A          142 IIMKDFSHPNVLSLLGICLRS-EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD  217 (373)
T ss_dssp             TTSTTCCCTTBCCCCEEECCC-SSCCEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCcceEEEEEEcC-CCCeEEEEECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCc
Confidence            567788999999999986543 3567899999999999999853   234588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       218 lkp~NIll~~~~~~kL~DFG~  238 (373)
T 3c1x_A          218 LAARNCMLDEKFTVKVADFGL  238 (373)
T ss_dssp             CCGGGEEECTTCCEEECCC--
T ss_pred             cchheEEECCCCCEEEeeccc
Confidence            999999999999999999983

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.84  E-value=1.9e-22  Score=157.94  Aligned_cols=101  Identities=19%  Similarity=0.285  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh----HHHHHHhhhcCCChHHHHHHHHH--hcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ----ELFLVLELADQGDLALVIAECRQ--KKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~----~~~lv~e~~~~g~L~~~i~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+++.++||||+++++++......    ..++||||+++|+|.+++.....  ....+++..++.++.|+++||.|||++
T Consensus        77 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~  156 (323)
T 3qup_A           77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR  156 (323)
T ss_dssp             HHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC
Confidence            455677899999999998763211    12789999999999999976442  222589999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       157 ~ivH~Dikp~NIli~~~~~~kl~Dfg~  183 (323)
T 3qup_A          157 NFIHRDLAARNCMLAEDMTVCVADFGL  183 (323)
T ss_dssp             TCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred             CcccCCCCcceEEEcCCCCEEEeeccc
Confidence            999999999999999999999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.84  E-value=5.8e-23  Score=161.15  Aligned_cols=75  Identities=20%  Similarity=0.269  Sum_probs=65.2

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        140 LFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       140 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +++|||||++|+|.+++.... .....++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~  210 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRC-SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  210 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEEecCCCCHHHHHhccc-CccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCc
Confidence            679999999999999986522 112345567899999999999999999999999999999999999999999984

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.84  E-value=4.7e-23  Score=162.51  Aligned_cols=94  Identities=27%  Similarity=0.398  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  .+.+++||||+ +|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        61 ~~l~~l~hpnIv~l~~~~~~--~~~~~lv~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~D  133 (336)
T 3h4j_B           61 SYLKLLRHPHIIKLYDVITT--PTDIVMVIEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD  133 (336)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             HHHHhCCCCCCCeEEEEEEe--CCEEEEEEECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence            45677889999999999876  45789999999 5699998865    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       134 lkp~NIll~~~~~~kl~DFG~  154 (336)
T 3h4j_B          134 LKPENLLLDDNLNVKIADFGL  154 (336)
T ss_dssp             CSTTTEEECTTCCEEECCSSC
T ss_pred             CchhhEEEcCCCCEEEEEecc
Confidence            999999999999999999984

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.84  E-value=8e-23  Score=162.80  Aligned_cols=95  Identities=24%  Similarity=0.343  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+..++||||+++|+|.+++..    +..+++..+..++.||++||.|||++||+|||
T Consensus        80 ~il~~l~hpnIv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~D  153 (362)
T 2bdw_A           80 RICRKLQHPNIVRLHDSIQE--ESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNGIVHRN  153 (362)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHhCCCCCCCeEEEEEEe--CCEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            55667889999999999876  4678999999999999998843    45699999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeecccccC
Q psy18117        195 ERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |||+|||++.++   .+||+|||.
T Consensus       154 lkp~NIll~~~~~~~~~kl~DfG~  177 (362)
T 2bdw_A          154 LKPENLLLASKAKGAAVKLADFGL  177 (362)
T ss_dssp             CSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CchHHEEEecCCCCCCEEEeecCc
Confidence            999999998654   699999984

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=7.7e-23  Score=160.05  Aligned_cols=100  Identities=21%  Similarity=0.264  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++........++||||+++|+|.+++.... ....+++..++.++.|+++||.|||++||+|||
T Consensus        59 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  137 (319)
T 4euu_A           59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN  137 (319)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence            4566778999999999887654457789999999999999996532 223489999999999999999999999999999


Q ss_pred             cchhhhhh----hccceeecccccC
Q psy18117        195 ERETFLSV----LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~----~~~~~~ki~D~~~  215 (215)
                      |||+|||+    +.++.+||+|||.
T Consensus       138 lkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A          138 IKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             CSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             CCHHHEEEeccCCCCceEEEccCCC
Confidence            99999999    8888999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.84  E-value=7.2e-23  Score=163.35  Aligned_cols=98  Identities=23%  Similarity=0.266  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH---hcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ---KKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++..  ....++||||+++|+|.+++.....   ....+++..++.++.|++.||.|||++||+
T Consensus       126 ~~l~~l~hpnIv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv  203 (367)
T 3l9p_A          126 LIISKFNHQNIVRCIGVSLQ--SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI  203 (367)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHhCCCCCCCeEEEEEec--CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence            45567789999999999876  4577999999999999999976431   123588999999999999999999999999


Q ss_pred             ccccchhhhhhhccc---eeeccccc
Q psy18117        192 HRGERETFLSVLGDC---VRTVSEQA  214 (215)
Q Consensus       192 HrDikp~Nil~~~~~---~~ki~D~~  214 (215)
                      ||||||+|||++.+|   .+||+|||
T Consensus       204 HrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          204 HRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             CSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             CCCCChhhEEEecCCCCceEEECCCc
Confidence            999999999999655   69999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.84  E-value=8.1e-23  Score=164.80  Aligned_cols=96  Identities=22%  Similarity=0.330  Sum_probs=82.2

Q ss_pred             ccCCCcchhhhhhhhcC--CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        118 KTLHHPNIVELRSAFAS--RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~--~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+||||+++++++..  .+...+++|||||++|+|.+++....  ...+++..++.++.||+.||.|||++||+||||
T Consensus       110 ~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  187 (400)
T 1nxk_A          110 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDV  187 (400)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence            45579999999998753  12356899999999999999996522  235999999999999999999999999999999


Q ss_pred             chhhhhhhc---cceeecccccC
Q psy18117        196 RETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~---~~~~ki~D~~~  215 (215)
                      ||+|||++.   ++.+||+|||.
T Consensus       188 kp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          188 KPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             CGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcceEEEecCCCCccEEEEeccc
Confidence            999999998   78999999984

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=9.3e-23  Score=155.82  Aligned_cols=95  Identities=19%  Similarity=0.242  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ++..++||||+++|+|.+++..   .+..+++..++.++.|+++||.|||++||+|||
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  131 (269)
T 4hcu_A           57 EVMMKLSHPKLVQLYGVCLE--QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  131 (269)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSEEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEec--CCceEEEEEeCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45567789999999999876  4578999999999999999854   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       132 ikp~Nil~~~~~~~kl~Dfg  151 (269)
T 4hcu_A          132 LAARNCLVGENQVIKVSDFG  151 (269)
T ss_dssp             CCGGGEEECGGGCEEECCTT
T ss_pred             cchheEEEcCCCCEEecccc
Confidence            99999999999999999997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.84  E-value=3.5e-23  Score=162.41  Aligned_cols=95  Identities=24%  Similarity=0.289  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ++..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        57 ~~l~~l~hpnIv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~D  130 (323)
T 3tki_A           57 CINKMLNHENVVKFYGHRRE--GNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  130 (323)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCeEEEEEec--CCeEEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            45667889999999999876  4678999999999999998843    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       131 lkp~NIll~~~~~~kl~Dfg~  151 (323)
T 3tki_A          131 IKPENLLLDERDNLKISDFGL  151 (323)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             cchHHEEEeCCCCEEEEEeec
Confidence            999999999999999999984

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.84  E-value=8e-23  Score=160.57  Aligned_cols=95  Identities=25%  Similarity=0.374  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ....++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        66 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  139 (326)
T 2y0a_A           66 SILKEIQHPNVITLHEVYEN--KTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQIAHFD  139 (326)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEEEEEEe--CCEEEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCC
Confidence            45567789999999999876  4678999999999999999843    45699999999999999999999999999999


Q ss_pred             cchhhhhhhccc----eeecccccC
Q psy18117        195 ERETFLSVLGDC----VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~----~~ki~D~~~  215 (215)
                      |||+|||++.++    .+||+|||.
T Consensus       140 lkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A          140 LKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             CCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CCHHHEEEecCCCCCCCEEEEECCC
Confidence            999999999887    899999984

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.84  E-value=3e-23  Score=160.86  Aligned_cols=96  Identities=27%  Similarity=0.410  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.......+++||||+++|+|.+++.     ...+++..++.++.|+++||.|||++||+|||
T Consensus        88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  162 (298)
T 2zv2_A           88 AILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRD  162 (298)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            4556778999999999987655567899999999999988642     34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~  183 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGV  183 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEecCCC
Confidence            999999999999999999984

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.84  E-value=1.3e-22  Score=158.81  Aligned_cols=98  Identities=26%  Similarity=0.270  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh--cCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--KCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .+++.++||||+++++++..  ++..++||||+++ +|.+++......  ...+++..++.++.|+++||.|||++||+|
T Consensus        55 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH  131 (317)
T 2pmi_A           55 SLMKELKHENIVRLYDVIHT--ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH  131 (317)
T ss_dssp             HHHTTCCBTTBCCEEEEECC--TTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHhcCCCCcceEEEEEEE--CCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence            45677889999999999876  5678999999995 999998764421  134889999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       132 ~Dlkp~NIl~~~~~~~kl~Dfg~  154 (317)
T 2pmi_A          132 RDLKPQNLLINKRGQLKLGDFGL  154 (317)
T ss_dssp             CCCCGGGEEECTTCCEEECCCSS
T ss_pred             CCCChHHeEEcCCCCEEECcCcc
Confidence            99999999999999999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.84  E-value=9.4e-23  Score=155.66  Aligned_cols=96  Identities=17%  Similarity=0.219  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++||||+++|+|.+++....   ..+++..++.++.|+++||.|||++||+|||
T Consensus        55 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  129 (268)
T 3sxs_A           55 QTMMKLSHPKLVKFYGVCSK--EYPIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESHQFIHRD  129 (268)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             HHHHhCCCCCEeeEEEEEcc--CCceEEEEEccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            44556789999999999865  467899999999999999996632   2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       130 ikp~Nil~~~~~~~~l~Dfg~  150 (268)
T 3sxs_A          130 LAARNCLVDRDLCVKVSDFGM  150 (268)
T ss_dssp             CSGGGEEECTTCCEEECCTTC
T ss_pred             cCcceEEECCCCCEEEccCcc
Confidence            999999999999999999983

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.84  E-value=1.2e-22  Score=159.22  Aligned_cols=99  Identities=19%  Similarity=0.172  Sum_probs=88.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC---Ccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR---RIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~  191 (215)
                      .++..++||||+++++++..  ....++||||+++|+|.+++.........+++..+..++.|++.||.|||++   ||+
T Consensus        79 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~iv  156 (326)
T 3uim_A           79 EMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII  156 (326)
T ss_dssp             HGGGTCCCTTBCCCCEEECC--SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEE
T ss_pred             HHHHhccCCCccceEEEEec--CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence            45677889999999999876  4578899999999999999976444445699999999999999999999999   999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       157 H~Dlkp~Nil~~~~~~~kl~Dfg~  180 (326)
T 3uim_A          157 HRDVKAANILLDEEFEAVVGDFGL  180 (326)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCSS
T ss_pred             eCCCchhhEEECCCCCEEeccCcc
Confidence            999999999999999999999984

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.84  E-value=8.7e-23  Score=160.06  Aligned_cols=96  Identities=18%  Similarity=0.270  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCc--hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR----  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~----  188 (215)
                      ..+..++||||+++++++....  ...+++||||+++|+|.+++..     ..+++..++.++.|++.||.|||++    
T Consensus        70 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l  144 (322)
T 3soc_A           70 YSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGL  144 (322)
T ss_dssp             HTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            4567788999999999987532  2346899999999999999954     2489999999999999999999999    


Q ss_pred             ------CccccccchhhhhhhccceeecccccC
Q psy18117        189 ------RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ------~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                            ||+||||||+|||++.++.+||+|||.
T Consensus       145 ~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A          145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             TTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence                  999999999999999999999999984

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.84  E-value=2.4e-22  Score=160.76  Aligned_cols=100  Identities=9%  Similarity=0.011  Sum_probs=78.8

Q ss_pred             cCCccCCCcchhhhhhhh-------cCCc----------hh-----HHHHHHhhhcCCChHHHHHHHHHh---cCCchhH
Q psy18117        115 YSDKTLHHPNIVELRSAF-------ASRS----------GQ-----ELFLVLELADQGDLALVIAECRQK---KCHLAEC  169 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~-------~~~~----------~~-----~~~lv~e~~~~g~L~~~i~~~~~~---~~~~~~~  169 (215)
                      ..+..++||||++++..+       ....          ++     ..+++|||+. |+|.+++......   ...+++.
T Consensus       128 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~  206 (377)
T 3byv_A          128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHH  206 (377)
T ss_dssp             GGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHH
T ss_pred             HhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccHH
Confidence            455677899999998443       3210          11     2679999995 6999999764321   1124458


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        170 LVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       170 ~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .++.++.|++.||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       207 ~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~  252 (377)
T 3byv_A          207 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEH  252 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechh
Confidence            8889999999999999999999999999999999999999999983

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.84  E-value=1.4e-22  Score=165.75  Aligned_cols=98  Identities=20%  Similarity=0.280  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++... ...+++||||+++|+|.+++...  .+..+++..+..++.|+++||.|||++||+|||
T Consensus       238 ~~l~~l~h~niv~~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  314 (450)
T 1k9a_A          238 SVMTQLRHSNLVQLLGVIVEE-KGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  314 (450)
T ss_dssp             HHHHTCCCTTBCCEEEEEECT-TSCEEEEEECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhccCCCEEEEEEEEEcC-CCceEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            456688999999999987653 34689999999999999999763  233478999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       315 lkp~Nill~~~~~~kl~DfG~  335 (450)
T 1k9a_A          315 LAARNVLVSEDNVAKVSDFGL  335 (450)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CCHhhEEECCCCCEEEeeCCC
Confidence            999999999999999999984

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=1.4e-22  Score=165.86  Aligned_cols=96  Identities=19%  Similarity=0.306  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..   +.+++||||+++|+|.+++.....  ..+++..+..++.|++.||.|||+++|+|||
T Consensus       235 ~~l~~l~h~~iv~l~~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD  309 (454)
T 1qcf_A          235 NVMKTLQHDKLVKLHAVVTK---EPIYIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD  309 (454)
T ss_dssp             HHHTTCCCTTBCCEEEEECS---SSCEEEECCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             HHHhhCCCCCEeeEEEEEeC---CccEEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            45677899999999998753   468999999999999999975432  2588899999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       310 lkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          310 LRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             CSGGGEEECTTCCEEECSTTG
T ss_pred             CCHHHEEECCCCcEEEeeCCC
Confidence            999999999999999999983

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.84  E-value=1.1e-22  Score=160.07  Aligned_cols=99  Identities=18%  Similarity=0.247  Sum_probs=86.3

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh----------cCCchhHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----------KCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~----------~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      .++..+ +||||+++++.+..  ++..++||||+++|+|.+++......          ...+++..++.++.|++.||.
T Consensus       101 ~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  178 (333)
T 2i1m_A          101 KIMSHLGQHENIVNLLGACTH--GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMA  178 (333)
T ss_dssp             HHHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCCeeeEEEEEec--CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHH
Confidence            344556 79999999999876  46789999999999999999765421          235789999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++||+||||||+|||++.++.+||+|||.
T Consensus       179 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  210 (333)
T 2i1m_A          179 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGL  210 (333)
T ss_dssp             HHHHTTEECSCCSGGGCEEEGGGEEEBCCCGG
T ss_pred             HHhcCCcccCCcccceEEECCCCeEEECcccc
Confidence            99999999999999999999999999999983

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.84  E-value=1.9e-22  Score=155.14  Aligned_cols=95  Identities=22%  Similarity=0.364  Sum_probs=82.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++++..   +..++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        68 ~~l~~l~h~~iv~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  141 (281)
T 1mp8_A           68 LTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKRFVHRD  141 (281)
T ss_dssp             HHHHTCCCTTBCCEEEEECS---SSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCccceEEEEEcc---CccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence            34566789999999998743   5688999999999999998642   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       142 lkp~Nil~~~~~~~kl~Dfg~  162 (281)
T 1mp8_A          142 IAARNVLVSSNDCVKLGDFGL  162 (281)
T ss_dssp             CSGGGEEEEETTEEEECC---
T ss_pred             ccHHHEEECCCCCEEECcccc
Confidence            999999999999999999983

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.84  E-value=2.2e-22  Score=171.77  Aligned_cols=90  Identities=21%  Similarity=0.295  Sum_probs=82.9

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||+|+.++..+.+  .+.+++||||+++|+|..++...    ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus       399 ~~~~~i~~l~~~~~~--~~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N  472 (674)
T 3pfq_A          399 GKPPFLTQLHSCFQT--MDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN  472 (674)
T ss_dssp             TCCTTBCCEEEECBC--SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT
T ss_pred             cCCCeEEEEEEEEEe--CCEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh
Confidence            379999999999876  46799999999999999999653    369999999999999999999999999999999999


Q ss_pred             hhhhccceeecccccC
Q psy18117        200 LSVLGDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~~ki~D~~~  215 (215)
                      ||++.+|.+||+|||.
T Consensus       473 ILl~~~g~ikL~DFGl  488 (674)
T 3pfq_A          473 VMLDSEGHIKIADFGM  488 (674)
T ss_dssp             EEECSSSCEEECCCTT
T ss_pred             EEEcCCCcEEEeecce
Confidence            9999999999999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.84  E-value=2.1e-22  Score=161.44  Aligned_cols=99  Identities=23%  Similarity=0.317  Sum_probs=86.1

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~  181 (215)
                      .+...+ +||||+++++.+..  ++..++||||+++|+|.+++.....            ....+++..++.++.|++.|
T Consensus       126 ~~l~~l~~hpnIv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  203 (382)
T 3tt0_A          126 EMMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG  203 (382)
T ss_dssp             HHHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCchhhhheeeecc--CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHH
Confidence            344555 89999999999876  5678999999999999999976321            01358999999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||++||+||||||+|||++.++.+||+|||.
T Consensus       204 L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~  237 (382)
T 3tt0_A          204 MEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL  237 (382)
T ss_dssp             HHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSC
T ss_pred             HHHHHhCCEecCCCCcceEEEcCCCcEEEcccCc
Confidence            9999999999999999999999999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.84  E-value=1.4e-22  Score=159.07  Aligned_cols=98  Identities=26%  Similarity=0.280  Sum_probs=87.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++...+.+.+++||||+++|+|.+++....   ..+++..++.++.|++.||.|||++||+|||
T Consensus        76 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  152 (327)
T 3lxl_A           76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSRRCVHRD  152 (327)
T ss_dssp             HHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            4556778999999999887555567899999999999999997532   3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       153 ikp~NIl~~~~~~~kl~Dfg~  173 (327)
T 3lxl_A          153 LAARNILVESEAHVKIADFGL  173 (327)
T ss_dssp             CSGGGEEEEETTEEEECCGGG
T ss_pred             CChhhEEECCCCCEEEccccc
Confidence            999999999999999999983

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.84  E-value=2.8e-22  Score=157.39  Aligned_cols=93  Identities=27%  Similarity=0.345  Sum_probs=81.5

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+ .||||+++++++.+  ....++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+||||
T Consensus        59 l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  132 (325)
T 3kn6_A           59 LKLCEGHPNIVKLHEVFHD--QLHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL  132 (325)
T ss_dssp             HHHTTTCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHhcCCCCeeEEEEEEEc--CCEEEEEEEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence            3444 49999999999976  4678999999999999999864    446999999999999999999999999999999


Q ss_pred             chhhhhhhccc---eeecccccC
Q psy18117        196 RETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~---~~ki~D~~~  215 (215)
                      ||+|||++.++   .+||+|||.
T Consensus       133 kp~NIll~~~~~~~~~kl~Dfg~  155 (325)
T 3kn6_A          133 KPENLLFTDENDNLEIKIIDFGF  155 (325)
T ss_dssp             CGGGEEEEC----CEEEECCCTT
T ss_pred             CHHHEEEecCCCcccEEEecccc
Confidence            99999998766   899999984

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.83  E-value=8.5e-23  Score=160.28  Aligned_cols=95  Identities=20%  Similarity=0.225  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++++..   ...++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        67 ~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  140 (325)
T 3kex_A           67 LAIGSLDHAHIVRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRN  140 (325)
T ss_dssp             HHHHTCCCTTBCCEEEEECB---SSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHhcCCCCCcCeEEEEEcC---CccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence            34567789999999998753   4688999999999999998542   34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       141 ikp~Nil~~~~~~~kl~Dfg~  161 (325)
T 3kex_A          141 LAARNVLLKSPSQVQVADFGV  161 (325)
T ss_dssp             CSSTTEEESSSSCEEECSCSG
T ss_pred             cchheEEECCCCeEEECCCCc
Confidence            999999999999999999983

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.83  E-value=3.9e-23  Score=161.83  Aligned_cols=99  Identities=17%  Similarity=0.236  Sum_probs=86.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++.+..  .+..++||||+++|+|.+++.........+++..+..++.|++.||.|||++||+|||
T Consensus        87 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~d  164 (321)
T 2qkw_B           87 ETLSFCRHPHLVSLIGFCDE--RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRD  164 (321)
T ss_dssp             HGGGSCCCTTBCCEEEECCC--TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEeeEEEEEcC--CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCC
Confidence            45677889999999999875  5678999999999999998854222223589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       165 lkp~Nil~~~~~~~kl~Dfg~  185 (321)
T 2qkw_B          165 VKSINILLDENFVPKITDFGI  185 (321)
T ss_dssp             CCSTTEEECTTCCEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999983

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.83  E-value=4.8e-22  Score=155.53  Aligned_cols=99  Identities=18%  Similarity=0.257  Sum_probs=87.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------KCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+++.++||||+++++.+..  ++..++||||+++|+|.+++......      ...+++..+..++.|++.||.|||++
T Consensus        80 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  157 (322)
T 1p4o_A           80 SVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN  157 (322)
T ss_dssp             HHGGGCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCCEeeeEEEEcc--CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            45677889999999999876  46789999999999999999764421      13468899999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       158 ~i~H~dikp~NIli~~~~~~kl~Dfg~  184 (322)
T 1p4o_A          158 KFVHRDLAARNCMVAEDFTVKIGDFGM  184 (322)
T ss_dssp             TCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             CCccCCCccceEEEcCCCeEEECcCcc
Confidence            999999999999999999999999983

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.83  E-value=1.5e-22  Score=158.94  Aligned_cols=99  Identities=22%  Similarity=0.353  Sum_probs=86.1

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH------------HhcCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~~~ql~~~  181 (215)
                      .++..+ +||||+++++.+..  .+..++||||+++|+|.+++....            .....+++..++.++.||++|
T Consensus        77 ~~l~~l~~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~a  154 (327)
T 1fvr_A           77 EVLCKLGHHPNIINLLGACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  154 (327)
T ss_dssp             HHHTTCCCCTTBCCEEEEEEE--TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHhccCCCchhhhceeeee--CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            344556 89999999999876  567899999999999999986532            112368999999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |.|||++||+||||||+|||++.++.+||+|||.
T Consensus       155 L~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~  188 (327)
T 1fvr_A          155 MDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  188 (327)
T ss_dssp             HHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             HHHHHhCCccCCCCccceEEEcCCCeEEEcccCc
Confidence            9999999999999999999999999999999984

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.83  E-value=1.7e-22  Score=160.98  Aligned_cols=96  Identities=11%  Similarity=0.117  Sum_probs=83.6

Q ss_pred             CCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ....++||||+++++.+.....  ...++||||+ +|+|.+++...   ...+++..+..++.|++.||.|||++||+||
T Consensus       101 ~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr  176 (364)
T 3op5_A          101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEHEYVHG  176 (364)
T ss_dssp             HHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence            3467789999999998865322  3479999999 88999998652   3469999999999999999999999999999


Q ss_pred             ccchhhhhhh--ccceeecccccC
Q psy18117        194 GERETFLSVL--GDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~--~~~~~ki~D~~~  215 (215)
                      ||||+|||++  .++.+||+|||.
T Consensus       177 Dlkp~Nill~~~~~~~~kl~DFG~  200 (364)
T 3op5_A          177 DIKASNLLLNYKNPDQVYLVDYGL  200 (364)
T ss_dssp             CCCGGGEEEESSCTTCEEECCCTT
T ss_pred             cCCHHHEEEecCCCCeEEEEECCc
Confidence            9999999999  889999999984

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.83  E-value=7.2e-23  Score=159.72  Aligned_cols=98  Identities=27%  Similarity=0.313  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--ILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H  192 (215)
                      .++..++||||+++++.+..  ....++||||+++|+|.+++..... +..+++..++.++.|++.||.|||++|  |+|
T Consensus        86 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH  162 (309)
T 3p86_A           86 AIMKRLRHPNIVLFMGAVTQ--PPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRNPPIVH  162 (309)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--TTCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred             HHHHhCCCCCEeeEEEEEEE--CCceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEC
Confidence            45677789999999999876  4678999999999999999864221 123899999999999999999999999  999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       163 ~Dikp~NIll~~~~~~kL~Dfg~  185 (309)
T 3p86_A          163 RNLKSPNLLVDKKYTVKVCDFGL  185 (309)
T ss_dssp             TTCCGGGEEECTTCCEEECCCC-
T ss_pred             CCCChhhEEEeCCCcEEECCCCC
Confidence            99999999999999999999983

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.83  E-value=1.5e-22  Score=155.64  Aligned_cols=95  Identities=20%  Similarity=0.287  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+..++||||+++|+|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus        71 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  145 (283)
T 3gen_A           71 KVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD  145 (283)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSEEEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             HHHhcCCCCCEeeEEEEEec--CCCeEEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            45567789999999999876  46789999999999999998642   34599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       146 ikp~Nili~~~~~~kl~Dfg  165 (283)
T 3gen_A          146 LAARNCLVNDQGVVKVSDFG  165 (283)
T ss_dssp             CSGGGEEECTTSCEEECSTT
T ss_pred             CccceEEEcCCCCEEEcccc
Confidence            99999999999999999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.83  E-value=1.5e-22  Score=161.86  Aligned_cols=96  Identities=23%  Similarity=0.296  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+.+++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus       138 ~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  212 (373)
T 2x4f_A          138 SVMNQLDHANLIQLYDAFES--KNDIVLVMEYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQMYILHLD  212 (373)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEE--CCEEEEEEeCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence            55677899999999999876  46789999999999999988642   33589999999999999999999999999999


Q ss_pred             cchhhhhh--hccceeecccccC
Q psy18117        195 ERETFLSV--LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~--~~~~~~ki~D~~~  215 (215)
                      |||+|||+  +.++.+||+|||.
T Consensus       213 lkp~NIll~~~~~~~~kl~DFG~  235 (373)
T 2x4f_A          213 LKPENILCVNRDAKQIKIIDFGL  235 (373)
T ss_dssp             CCGGGEEEEETTTTEEEECCCSS
T ss_pred             CCHHHEEEecCCCCcEEEEeCCC
Confidence            99999999  5667999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.83  E-value=1.6e-22  Score=156.36  Aligned_cols=95  Identities=29%  Similarity=0.360  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ++..++||||+++ ++.+.+..   .+..+++..++.++.|++.||.|||++||+|||
T Consensus        53 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~d  126 (292)
T 3o0g_A           53 CLLKELKHKNIVRLHDVLHS--DKKLTLVFEFCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD  126 (292)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHhcCCCCCEeeEEeEEEe--CCEEEEEEecCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            45567789999999999876  5678999999997 77776643   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 ikp~Nil~~~~~~~kl~Dfg~  147 (292)
T 3o0g_A          127 LKPQNLLINRNGELKLANFGL  147 (292)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHEEEcCCCCEEEeeccc
Confidence            999999999999999999984

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.83  E-value=5.5e-22  Score=153.77  Aligned_cols=99  Identities=24%  Similarity=0.389  Sum_probs=87.0

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh----cCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK----KCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      +.....++||||+++++.+..  .+..++||||+++|+|.+++......    ...+++..++.++.|++.||.|||++|
T Consensus        64 ~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  141 (303)
T 2vwi_A           64 IQAMSQCHHPNIVSYYTSFVV--KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG  141 (303)
T ss_dssp             --CCCCCCCTTBCCEEEEEES--SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhhcCCCCEeeEEEEEee--cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            366778899999999999876  45789999999999999998764322    345899999999999999999999999


Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |+||||||+||+++.++.+||+|||
T Consensus       142 i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A          142 QIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             CCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             CCCCCCChhhEEEcCCCCEEEEecc
Confidence            9999999999999999999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.83  E-value=1.8e-22  Score=154.83  Aligned_cols=100  Identities=28%  Similarity=0.408  Sum_probs=88.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC-----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR-----  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-----  189 (215)
                      .....++||||+++++.+........++||||+++|+|.+++......+..+++..++.++.|++.||.|||+++     
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~  136 (279)
T 2w5a_A           57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT  136 (279)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCe
Confidence            445667899999999987554456789999999999999999876665667999999999999999999999999     


Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |+||||||+|||++.++.+||+|||
T Consensus       137 ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A          137 VLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             -CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             eEEeccchhhEEEcCCCCEEEecCc
Confidence            9999999999999999999999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.83  E-value=2.4e-22  Score=159.47  Aligned_cols=99  Identities=22%  Similarity=0.314  Sum_probs=84.0

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh--------------------------------
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--------------------------------  162 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~--------------------------------  162 (215)
                      ++..+ +||||+++++.+... +..+++|||||++|+|.+++......                                
T Consensus        78 ~l~~l~~hpniv~~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (359)
T 3vhe_A           78 ILIHIGHHLNVVNLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSI  156 (359)
T ss_dssp             HHHHHCCCTTBCCEEEEECST-TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------
T ss_pred             HHHhhcCCcceeeeeeeeecC-CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhcccccc
Confidence            34444 799999999998763 34588999999999999999653211                                


Q ss_pred             ------------------------------cCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeeccc
Q psy18117        163 ------------------------------KCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE  212 (215)
Q Consensus       163 ------------------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D  212 (215)
                                                    +..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~D  236 (359)
T 3vhe_A          157 TSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD  236 (359)
T ss_dssp             ---------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             CccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEe
Confidence                                          11288999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q psy18117        213 QAK  215 (215)
Q Consensus       213 ~~~  215 (215)
                      ||.
T Consensus       237 fg~  239 (359)
T 3vhe_A          237 FGL  239 (359)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            983

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.83  E-value=1.2e-22  Score=158.55  Aligned_cols=95  Identities=32%  Similarity=0.408  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++||||+++ +|.+++..   .+..+++..++.++.|++.||.|||++||+|||
T Consensus        71 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~D  144 (311)
T 3niz_A           71 SLLKELHHPNIVSLIDVIHS--ERCLTLVFEFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRD  144 (311)
T ss_dssp             HHHHHCCCTTBCCEEEEECC--SSCEEEEEECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHcCCCCEeeeeeEEcc--CCEEEEEEcCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            45667789999999999876  5678999999996 88888754   234599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       145 ikp~NIl~~~~~~~kl~Dfg~  165 (311)
T 3niz_A          145 LKPQNLLINSDGALKLADFGL  165 (311)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CchHhEEECCCCCEEEccCcC
Confidence            999999999999999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.83  E-value=1.3e-22  Score=156.60  Aligned_cols=94  Identities=29%  Similarity=0.418  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++||||+++ +|.+++...   ...+++..++.++.|+++||.|||++||+|||
T Consensus        52 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  125 (288)
T 1ob3_A           52 SILKELKHSNIVKLYDVIHT--KKRLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD  125 (288)
T ss_dssp             HGGGGCCCTTBCCEEEEEEC--SSCEEEEEECCSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhcCCCCEeeeeeEEcc--CCeEEEEEEecCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            55677889999999999876  4678999999997 999988542   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       126 lkp~Nil~~~~~~~kl~Dfg  145 (288)
T 1ob3_A          126 LKPQNLLINREGELKIADFG  145 (288)
T ss_dssp             CCGGGEEECTTSCEEECCTT
T ss_pred             CCHHHEEEcCCCCEEEeECc
Confidence            99999999999999999998

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.83  E-value=1.9e-22  Score=164.22  Aligned_cols=96  Identities=22%  Similarity=0.298  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .+++.++||||+++++++...+.   ..+++||||+++ +|.+++..    +..+++..++.++.||+.||.|||++||+
T Consensus        77 ~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~giv  151 (432)
T 3n9x_A           77 TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESGII  151 (432)
T ss_dssp             HHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            55677889999999999875322   468999999986 99999853    44699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       152 HrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          152 HRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCCCHHHeEECCCCCEEEccCCC
Confidence            999999999999999999999984

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=2.4e-22  Score=161.40  Aligned_cols=94  Identities=23%  Similarity=0.366  Sum_probs=82.8

Q ss_pred             CCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ++..+. ||||+++++++...+...+++||||+++ +|..++..     ..+++..+..++.||+.||.|||++||+|||
T Consensus        61 ~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrD  134 (388)
T 3oz6_A           61 ILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSGGLLHRD  134 (388)
T ss_dssp             HHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence            344554 9999999999876544578999999995 99998854     2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 lkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A          135 MKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHeEEcCCCCEEecCCcc
Confidence            999999999999999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=4.5e-22  Score=158.02  Aligned_cols=94  Identities=20%  Similarity=0.284  Sum_probs=84.2

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..+ +||||+++++.+..  ....++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+||
T Consensus       110 ~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~  183 (355)
T 1vzo_A          110 QVLEHIRQSPFLVTLHYAFQT--ETKLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKLGIIYR  183 (355)
T ss_dssp             HHHHHHHTCTTBCCEEEEEEE--TTEEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHccCCCceeEEEEEEee--CceEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence            444555 69999999998876  4678999999999999999965    2369999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeeccccc
Q psy18117        194 GERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||||+|||++.++.+||+|||
T Consensus       184 Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          184 DIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             CCCGGGEEECTTSCEEESCSS
T ss_pred             CCCHHHEEECCCCcEEEeeCC
Confidence            999999999999999999998

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.83  E-value=2.3e-22  Score=164.58  Aligned_cols=96  Identities=22%  Similarity=0.243  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..   +..++||||+++|+|.+++....  ...+++..+..++.|++.||.|||++||+|||
T Consensus       231 ~~l~~l~hp~iv~~~~~~~~---~~~~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  305 (452)
T 1fmk_A          231 QVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  305 (452)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEcC---CceEEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            45678899999999998754   46889999999999999997533  23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       306 lkp~Nill~~~~~~kl~DfG~  326 (452)
T 1fmk_A          306 LRAANILVGENLVCKVADFGL  326 (452)
T ss_dssp             CSGGGEEECGGGCEEECCCCT
T ss_pred             CChhhEEECCCCCEEECCCcc
Confidence            999999999999999999984

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.83  E-value=3.4e-22  Score=157.02  Aligned_cols=94  Identities=19%  Similarity=0.289  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   ...++++||+.+|+|.+++..   .+..+++..++.++.|++.||.|||++||+|||
T Consensus        69 ~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~D  142 (327)
T 3poz_A           69 YVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  142 (327)
T ss_dssp             HHHHHCCBTTBCCEEEEEES---SSEEEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeEEEEEEec---CCeEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            45567789999999999875   346789999999999999865   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       143 ikp~NIll~~~~~~kl~Dfg  162 (327)
T 3poz_A          143 LAARNVLVKTPQHVKITDFG  162 (327)
T ss_dssp             CCGGGEEEEETTEEEECCTT
T ss_pred             CChheEEECCCCCEEEccCc
Confidence            99999999999999999998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=1.6e-22  Score=162.34  Aligned_cols=96  Identities=25%  Similarity=0.378  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ...+++||||+++|+|.+++..   ....+++..++.++.||+.||.|||++||+|||
T Consensus       100 ~il~~l~hpnIv~~~~~~~~--~~~~~lv~E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  174 (387)
T 1kob_A          100 SIMNQLHHPKLINLHDAFED--KYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD  174 (387)
T ss_dssp             HHHTTCCSTTBCCEEEEEEC--SSEEEEEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCcCCCeEEEEEEe--CCEEEEEEEcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            55677889999999999876  5678999999999999998853   233699999999999999999999999999999


Q ss_pred             cchhhhhhhc--cceeecccccC
Q psy18117        195 ERETFLSVLG--DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~--~~~~ki~D~~~  215 (215)
                      |||+|||++.  ++.+||+|||.
T Consensus       175 lkp~NIll~~~~~~~vkL~DFG~  197 (387)
T 1kob_A          175 IKPENIMCETKKASSVKIIDFGL  197 (387)
T ss_dssp             CCGGGEEESSTTCCCEEECCCTT
T ss_pred             cchHHeEEecCCCCceEEEeccc
Confidence            9999999974  46899999984

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.83  E-value=3.8e-22  Score=154.54  Aligned_cols=97  Identities=19%  Similarity=0.224  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++... ++..++||||+++|+|.+++..   ....+++..++.++.|+++||.|||++||+|||
T Consensus        78 ~~l~~l~h~~iv~~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~d  153 (298)
T 3f66_A           78 IIMKDFSHPNVLSLLGICLRS-EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD  153 (298)
T ss_dssp             HHHHTCCCTTBCCCCEEECCS-SSCCEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeeeeEEEcC-CCceEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            455677899999999986543 4578899999999999999854   234588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       154 ikp~Nil~~~~~~~kl~Dfg~  174 (298)
T 3f66_A          154 LAARNCMLDEKFTVKVADFGL  174 (298)
T ss_dssp             CSGGGEEECTTCCEEECSCGG
T ss_pred             CchheEEECCCCCEEECcccc
Confidence            999999999999999999983

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.83  E-value=4.3e-22  Score=151.93  Aligned_cols=98  Identities=15%  Similarity=0.191  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--ILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H  192 (215)
                      ..+..++||||+++++++........++||||+++|+|.+++..  ..+..+++..++.++.|++.||.|||+++  |+|
T Consensus        59 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H  136 (271)
T 3kmu_A           59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPR  136 (271)
T ss_dssp             GGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTT
T ss_pred             HHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence            55677789999999999877544678999999999999999964  22235899999999999999999999999  999


Q ss_pred             cccchhhhhhhccceeeccccc
Q psy18117        193 RGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||||+|||++.++.+||+|++
T Consensus       137 ~dikp~Nil~~~~~~~~l~~~~  158 (271)
T 3kmu_A          137 HALNSRSVMIDEDMTARISMAD  158 (271)
T ss_dssp             CCCSGGGEEECTTSCEEEEGGG
T ss_pred             CCCccceEEEcCCcceeEEecc
Confidence            9999999999999988888765

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.83  E-value=4.1e-22  Score=157.10  Aligned_cols=95  Identities=24%  Similarity=0.336  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCC-ChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQG-DLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g-~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..++||||+++++++..  .+..++||||+.+| +|.+++..    ...+++..++.++.|++.||.|||++||+||
T Consensus        81 ~~l~~l~h~~Iv~~~~~~~~--~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~  154 (335)
T 3dls_A           81 AILSRVEHANIIKVLDIFEN--QGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHR  154 (335)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHhCCCCCEeeEEEEEee--CCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence            45677899999999999876  56789999999776 99998853    4469999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       155 Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A          155 DIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             CCSGGGEEECTTSCEEECCCTT
T ss_pred             ccCHHHEEEcCCCcEEEeeccc
Confidence            9999999999999999999984

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=4.3e-22  Score=155.49  Aligned_cols=100  Identities=20%  Similarity=0.261  Sum_probs=88.6

Q ss_pred             cCCccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .+.+.++||||+++++.+...  .....++||||+++|+|.+++......+..+++..++.++.|+++||.|||++||+|
T Consensus        78 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH  157 (317)
T 2buj_A           78 DMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAH  157 (317)
T ss_dssp             HHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            445667899999999988632  134688999999999999999876655677999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeeccccc
Q psy18117        193 RGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||||+|||++.++.+||+|||
T Consensus       158 ~dlkp~NIl~~~~~~~kl~dfg  179 (317)
T 2buj_A          158 RDLKPTNILLGDEGQPVLMDLG  179 (317)
T ss_dssp             CCCCGGGEEECTTSCEEECCCS
T ss_pred             CCCCHHHEEEcCCCCEEEEecC
Confidence            9999999999999999999998

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.83  E-value=5.6e-22  Score=156.74  Aligned_cols=90  Identities=20%  Similarity=0.368  Sum_probs=79.8

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||||+++++++.+  ++.+++|||||++|+|.+++..    +..+++..+..++.|++.||.|||++||+||||||+|
T Consensus        73 ~~hp~iv~~~~~~~~--~~~~~lv~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~N  146 (342)
T 2qr7_A           73 GQHPNIITLKDVYDD--GKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN  146 (342)
T ss_dssp             TTSTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             cCCCCcCeEEEEEEc--CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHH
Confidence            379999999999876  5688999999999999999854    3469999999999999999999999999999999999


Q ss_pred             hhhhcc----ceeecccccC
Q psy18117        200 LSVLGD----CVRTVSEQAK  215 (215)
Q Consensus       200 il~~~~----~~~ki~D~~~  215 (215)
                      ||+..+    +.+||+|||.
T Consensus       147 Il~~~~~~~~~~~kl~Dfg~  166 (342)
T 2qr7_A          147 ILYVDESGNPESIRICDFGF  166 (342)
T ss_dssp             EEESSSSCSGGGEEECCCTT
T ss_pred             EEEecCCCCcCeEEEEECCC
Confidence            997433    3699999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.83  E-value=3.4e-22  Score=158.41  Aligned_cols=96  Identities=30%  Similarity=0.360  Sum_probs=85.8

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.++..++||||+++++.+..  .+..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+||
T Consensus        99 ~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~  172 (349)
T 2w4o_A           99 IGVLLRLSHPNIIKLKEIFET--PTEISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHENGIVHR  172 (349)
T ss_dssp             CHHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHhCCCCCCcceeeeEec--CCeEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence            366778899999999999876  4678999999999999998843    4468999999999999999999999999999


Q ss_pred             ccchhhhhhhc---cceeecccccC
Q psy18117        194 GERETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~---~~~~ki~D~~~  215 (215)
                      ||||+|||++.   ++.+||+|||.
T Consensus       173 Dikp~NIll~~~~~~~~~kl~Dfg~  197 (349)
T 2w4o_A          173 DLKPENLLYATPAPDAPLKIADFGL  197 (349)
T ss_dssp             CCCGGGEEESSSSTTCCEEECCCC-
T ss_pred             CCCcccEEEecCCCCCCEEEccCcc
Confidence            99999999976   78999999983

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.83  E-value=4.5e-22  Score=155.98  Aligned_cols=94  Identities=21%  Similarity=0.370  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++.+..  .+..++||||+++|+|.+++..     ..+++..+..++.|++.||.|||++||+|||
T Consensus        94 ~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~D  166 (321)
T 2c30_A           94 VIMRDYQHFNVVEMYKSYLV--GEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQGVIHRD  166 (321)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCcceEEEEEEE--CCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            45567789999999998876  4678999999999999998742     3599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       167 lkp~NIll~~~~~~kl~Dfg~  187 (321)
T 2c30_A          167 IKSDSILLTLDGRVKLSDFGF  187 (321)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHEEECCCCcEEEeeeee
Confidence            999999999999999999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=3.1e-22  Score=161.59  Aligned_cols=100  Identities=24%  Similarity=0.397  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-----cCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-----KCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      .+++.++||||+++++++....+..+++||||+++ +|.+++......     ...+++..++.++.||+.||.|||++|
T Consensus        70 ~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  148 (405)
T 3rgf_A           70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  148 (405)
T ss_dssp             HHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55677889999999999865446678999999986 999988654422     124899999999999999999999999


Q ss_pred             ccccccchhhhhh----hccceeecccccC
Q psy18117        190 ILHRGERETFLSV----LGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~----~~~~~~ki~D~~~  215 (215)
                      |+||||||+|||+    +.++.+||+|||.
T Consensus       149 ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A          149 VLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             CCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             EeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            9999999999999    6778999999984

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.83  E-value=4.2e-22  Score=155.43  Aligned_cols=92  Identities=25%  Similarity=0.331  Sum_probs=82.1

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccch
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERE  197 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp  197 (215)
                      ...+||||+++++.+..  ++.+++||||+. |+|.+++...   +..+++..++.++.|++.||.|||++||+||||||
T Consensus       112 ~~~~h~~iv~l~~~~~~--~~~~~lv~e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  185 (311)
T 3p1a_A          112 KVGQHPCCVRLEQAWEE--GGILYLQTELCG-PSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKP  185 (311)
T ss_dssp             HHCCCTTBCCEEEEEEE--TTEEEEEEECCC-CBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred             HhcCCCcEEEEEEEEEe--CCEEEEEEeccC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence            34589999999999875  567899999995 5999988653   34699999999999999999999999999999999


Q ss_pred             hhhhhhccceeecccccC
Q psy18117        198 TFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       198 ~Nil~~~~~~~ki~D~~~  215 (215)
                      +|||++.++.+||+|||.
T Consensus       186 ~NIll~~~~~~kl~DFG~  203 (311)
T 3p1a_A          186 ANIFLGPRGRCKLGDFGL  203 (311)
T ss_dssp             GGEEECGGGCEEECCCTT
T ss_pred             HHEEECCCCCEEEcccee
Confidence            999999999999999984

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.83  E-value=3.5e-22  Score=160.16  Aligned_cols=102  Identities=24%  Similarity=0.265  Sum_probs=87.3

Q ss_pred             cccCCccCCCcchhhhhhhhcCCc------------------------------------hhHHHHHHhhhcCCChHHHH
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRS------------------------------------GQELFLVLELADQGDLALVI  156 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~------------------------------------~~~~~lv~e~~~~g~L~~~i  156 (215)
                      ++.+++.++||||+++++++....                                    ...+++||||+++ +|.+.+
T Consensus        50 E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l  128 (383)
T 3eb0_A           50 ELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVL  128 (383)
T ss_dssp             HHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHHHHH
T ss_pred             HHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHH
Confidence            346677889999999999885422                                    1226789999996 999998


Q ss_pred             HHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhh-ccceeecccccC
Q psy18117        157 AECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~-~~~~~ki~D~~~  215 (215)
                      ......+..+++..++.++.||++||.|||++||+||||||+|||++ .++.+||+|||.
T Consensus       129 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~  188 (383)
T 3eb0_A          129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS  188 (383)
T ss_dssp             HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCC
Confidence            87666667899999999999999999999999999999999999998 578999999984

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.82  E-value=3.2e-22  Score=160.98  Aligned_cols=102  Identities=25%  Similarity=0.284  Sum_probs=85.7

Q ss_pred             cccCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ++.+++.++||||+++++++....    ...+++||||+++ ++...+......+..+++..++.++.||+.||.|||++
T Consensus        82 E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~  160 (394)
T 4e7w_A           82 ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI  160 (394)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            346677889999999999885422    1237799999998 66666655455566799999999999999999999999


Q ss_pred             Cccccccchhhhhhh-ccceeecccccC
Q psy18117        189 RILHRGERETFLSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~-~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++ .++.+||+|||.
T Consensus       161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~  188 (394)
T 4e7w_A          161 GICHRDIKPQNLLLDPPSGVLKLIDFGS  188 (394)
T ss_dssp             TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence            999999999999999 789999999984

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.5e-22  Score=159.83  Aligned_cols=99  Identities=21%  Similarity=0.228  Sum_probs=84.5

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh-------------------cCCchhHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK-------------------KCHLAECLVWSY  174 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~-------------------~~~~~~~~~~~~  174 (215)
                      .++..+ +||||+++++.+..  .+..++||||+++|+|.+++......                   ...+++..++.+
T Consensus       100 ~~l~~l~~hp~iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  177 (344)
T 1rjb_A          100 KMMTQLGSHENIVNLLGACTL--SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF  177 (344)
T ss_dssp             HHHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHH
T ss_pred             HHHHhhcCCCCeeeEEEEEee--CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHH
Confidence            344556 89999999999876  46789999999999999999653210                   123789999999


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        175 FRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       175 ~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       178 ~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  218 (344)
T 1rjb_A          178 AYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGL  218 (344)
T ss_dssp             HHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGG
T ss_pred             HHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCcc
Confidence            99999999999999999999999999999999999999983

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.82  E-value=6.2e-22  Score=152.62  Aligned_cols=96  Identities=18%  Similarity=0.227  Sum_probs=85.6

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRGE  195 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrDi  195 (215)
                      .+.++|||++++++.+..  ++..++||||+++ +|.+++......+..+++..++.++.|++.||.|||++ ||+||||
T Consensus        60 ~~~~~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl  136 (290)
T 3fme_A           60 MRTVDCPFTVTFYGALFR--EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV  136 (290)
T ss_dssp             HTTCCCTTBCCEEEEEEC--SSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCC
T ss_pred             HHhCCCCeEEEEeeeeec--cCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence            456789999999999876  4678999999986 99998877666667899999999999999999999998 9999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       137 kp~Nil~~~~~~~kl~Dfg~  156 (290)
T 3fme_A          137 KPSNVLINALGQVKMCDFGI  156 (290)
T ss_dssp             SGGGCEECTTCCEEBCCC--
T ss_pred             CHHHEEECCCCCEEEeecCC
Confidence            99999999999999999983

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.82  E-value=7.5e-22  Score=154.07  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=81.6

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .+||||+++++.+..  ++..++||||+++|+|.+++...    ..+++..++.++.|++.||.|||++||+||||||+|
T Consensus        68 ~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  141 (316)
T 2ac3_A           68 QGHRNVLELIEFFEE--EDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN  141 (316)
T ss_dssp             CCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             cCCCCeeeEEEEEee--CCEEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH
Confidence            579999999999876  56899999999999999999652    368999999999999999999999999999999999


Q ss_pred             hhhhccce---eecccccC
Q psy18117        200 LSVLGDCV---RTVSEQAK  215 (215)
Q Consensus       200 il~~~~~~---~ki~D~~~  215 (215)
                      ||++.++.   +||+|||.
T Consensus       142 il~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A          142 ILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             EEESCSSSSCSEEECCTTC
T ss_pred             EEEccCCCcCceEEEEccC
Confidence            99998775   99999973

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.82  E-value=5.7e-22  Score=153.79  Aligned_cols=96  Identities=22%  Similarity=0.329  Sum_probs=83.4

Q ss_pred             ccCCCcchhhhhhhhcC--CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        118 KTLHHPNIVELRSAFAS--RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~--~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+||||+++++.+..  ......++||||+++|+|.+++...  ....+++..++.++.|++.||.|||++||+||||
T Consensus        66 ~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl  143 (299)
T 3m2w_A           66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV  143 (299)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            45589999999998754  2245689999999999999999752  2336999999999999999999999999999999


Q ss_pred             chhhhhhhc---cceeecccccC
Q psy18117        196 RETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~---~~~~ki~D~~~  215 (215)
                      ||+|||++.   ++.+||+|||.
T Consensus       144 kp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A          144 KPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             SGGGEEESSSSTTCCEEECCCTT
T ss_pred             CHHHEEEecCCCCCcEEEecccc
Confidence            999999998   78999999984

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.82  E-value=2.9e-22  Score=170.05  Aligned_cols=93  Identities=17%  Similarity=0.320  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +..++||||+++|+|.+++..    +..+++..+..++.||+.||.|||++||+|||
T Consensus       422 ~il~~l~hpnIv~l~~~~~~---~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrD  494 (635)
T 4fl3_A          422 NVMQQLDNPYIVRMIGICEA---ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRD  494 (635)
T ss_dssp             HHHHHCCCTTBCCEEEEEES---SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEec---CCEEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCC
Confidence            45677899999999998864   357899999999999999954    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       495 Lkp~NILl~~~~~~kL~DFG  514 (635)
T 4fl3_A          495 LAARNVLLVTQHYAKISDFG  514 (635)
T ss_dssp             CSGGGEEEEETTEEEECCTT
T ss_pred             CChHhEEEeCCCCEEEEEcC
Confidence            99999999999999999998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.82  E-value=2.6e-22  Score=167.36  Aligned_cols=96  Identities=22%  Similarity=0.243  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..   +.+++||||+++|+|.+++....  ...+++..+..++.||+.||.|||+++|+|||
T Consensus       314 ~~l~~l~hpniv~~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrD  388 (535)
T 2h8h_A          314 QVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  388 (535)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEee---ccceEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            55678899999999998754   46899999999999999997533  23588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       389 lkp~NIll~~~~~~kl~DFG~  409 (535)
T 2h8h_A          389 LRAANILVGENLVCKVADFGL  409 (535)
T ss_dssp             CSGGGEEECGGGCEEECCTTS
T ss_pred             CCHhhEEEcCCCcEEEccccc
Confidence            999999999999999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.82  E-value=5.7e-22  Score=155.77  Aligned_cols=95  Identities=19%  Similarity=0.272  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   ...++++||+.+|+|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus        69 ~~l~~l~hp~iv~~~~~~~~---~~~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  142 (327)
T 3lzb_A           69 YVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  142 (327)
T ss_dssp             HHHTTCCBTTBCCCCEEEES---SSEEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCeeEEEEEEec---CCceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCC
Confidence            45567789999999999875   3477899999999999998652   34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       143 ikp~NIl~~~~~~~kL~DfG~  163 (327)
T 3lzb_A          143 LAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             CCGGGEEEEETTEEEECCTTC
T ss_pred             CCHHHEEEcCCCCEEEccCcc
Confidence            999999999999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.82  E-value=3.5e-22  Score=153.36  Aligned_cols=94  Identities=26%  Similarity=0.406  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||+++++.+..  ....++||||+++|+|.+++...    ..+++..+..++.|++.||.|||++||+|||
T Consensus        61 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d  134 (279)
T 3fdn_A           61 EIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKRVIHRD  134 (279)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECC
T ss_pred             HHHHcCCCCCCcchhheEec--CCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence            45567789999999999876  46789999999999999998653    3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       135 lkp~Nili~~~~~~~l~Dfg  154 (279)
T 3fdn_A          135 IKPENLLLGSAGELKIADFG  154 (279)
T ss_dssp             CCGGGEEECTTSCEEECSCC
T ss_pred             CChHhEEEcCCCCEEEEecc
Confidence            99999999999999999997

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=5.3e-22  Score=156.30  Aligned_cols=96  Identities=21%  Similarity=0.284  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||+++++.+..  .+..++||||+++|+|.+++..   ....+++..+..++.|++.||.|||++||+|||
T Consensus        98 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  172 (333)
T 1mqb_A           98 GIMGQFSHHNIIRLEGVISK--YKPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRD  172 (333)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCCCcEEEEEec--CCCcEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            45567789999999999876  4678999999999999999864   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       173 ikp~NIl~~~~~~~kl~Dfg~  193 (333)
T 1mqb_A          173 LAARNILVNSNLVCKVSDFGL  193 (333)
T ss_dssp             CCGGGEEECTTCCEEECCCCC
T ss_pred             CChheEEECCCCcEEECCCCc
Confidence            999999999999999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.82  E-value=1.5e-22  Score=162.97  Aligned_cols=100  Identities=21%  Similarity=0.264  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++........++|||||++|+|.+++.... ....+++..++.++.|++.||.|||++||+|||
T Consensus        59 ~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  137 (396)
T 4eut_A           59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN  137 (396)
T ss_dssp             HHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEEECC
Confidence            4566778999999999987654456799999999999999986532 222389999999999999999999999999999


Q ss_pred             cchhhhhh----hccceeecccccC
Q psy18117        195 ERETFLSV----LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~----~~~~~~ki~D~~~  215 (215)
                      |||+|||+    +.++.+||+|||.
T Consensus       138 lkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A          138 IKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             CCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             cCHHHEEEeecCCCceeEEEecCCC
Confidence            99999999    7888999999983

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=6.2e-22  Score=155.73  Aligned_cols=93  Identities=17%  Similarity=0.232  Sum_probs=82.6

Q ss_pred             ccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-------
Q psy18117        118 KTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-------  188 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-------  188 (215)
                      ..++||||+++++.+.....  ..+++||||+++|+|.+++..     ..+++..++.++.|++.||.|||++       
T Consensus        86 ~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~  160 (337)
T 3mdy_A           86 VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK  160 (337)
T ss_dssp             TTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB
T ss_pred             HhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccC
Confidence            34689999999998865422  467899999999999999954     2599999999999999999999999       


Q ss_pred             -CccccccchhhhhhhccceeecccccC
Q psy18117        189 -RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 -~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                       ||+||||||+|||++.++.+||+|||.
T Consensus       161 ~~ivH~Dikp~Nill~~~~~~kl~Dfg~  188 (337)
T 3mdy_A          161 PAIAHRDLKSKNILVKKNGTCCIADLGL  188 (337)
T ss_dssp             CCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             CCEEecccchHHEEECCCCCEEEEeCCC
Confidence             999999999999999999999999984

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.82  E-value=8e-22  Score=153.57  Aligned_cols=99  Identities=34%  Similarity=0.563  Sum_probs=88.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++||||+++++.+..  .+..++||||+++|+|.+++......+..+++..++.++.|++.||.|||++||+|||
T Consensus        84 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  161 (310)
T 2wqm_A           84 DLLKQLNHPNVIKYYASFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRD  161 (310)
T ss_dssp             HHHHTCCCTTBCCEEEEEEE--TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCCCEeeEEEEEEc--CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCC
Confidence            44567789999999999876  5678999999999999999987666667799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       162 l~p~NIl~~~~~~~kl~Dfg~  182 (310)
T 2wqm_A          162 IKPANVFITATGVVKLGDLGL  182 (310)
T ss_dssp             CCGGGEEECTTSCEEECCC--
T ss_pred             CcHHHEEEcCCCCEEEEeccc
Confidence            999999999999999999973

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.82  E-value=5.3e-22  Score=152.51  Aligned_cols=99  Identities=21%  Similarity=0.380  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcC--------------CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFAS--------------RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA  180 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~--------------~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~  180 (215)
                      .+...++|||++++++.+..              .....+++||||+++|+|.+++...  ....+++..++.++.|++.
T Consensus        56 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~  133 (284)
T 2a19_B           56 KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITK  133 (284)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHH
Confidence            44567789999999887643              1134578999999999999999753  2346999999999999999


Q ss_pred             HHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        181 ALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       181 ~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       134 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  168 (284)
T 2a19_B          134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL  168 (284)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             HHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchh
Confidence            99999999999999999999999999999999983

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.82  E-value=4.2e-22  Score=168.55  Aligned_cols=95  Identities=20%  Similarity=0.319  Sum_probs=85.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +.+++||||+++|+|.+++..   .+..+++..+..++.|++.||.|||++||+|||
T Consensus       388 ~il~~l~hpniv~l~~~~~~---~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrD  461 (613)
T 2ozo_A          388 QIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN  461 (613)
T ss_dssp             HHHTTCCCTTBCCEEEEEES---SSEEEEEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEecc---CCeEEEEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCc
Confidence            45677899999999999865   458999999999999999853   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       462 lkp~NILl~~~~~vkL~DFGl  482 (613)
T 2ozo_A          462 LAARNVLLVNRHYAKISDFGL  482 (613)
T ss_dssp             CSGGGEEEEETTEEEECCCST
T ss_pred             CCHHHEEEcCCCcEEEeeccC
Confidence            999999999999999999984

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.82  E-value=3.5e-22  Score=153.97  Aligned_cols=96  Identities=20%  Similarity=0.365  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ++..++||||+++|+|.+++...  .+..+++..++.++.|++.||.|||++||+|||
T Consensus        61 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  136 (288)
T 3kfa_A           61 AVMKEIKHPNLVQLLGVCTR--EPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD  136 (288)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSEEEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEcc--CCCEEEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            45567789999999999876  46789999999999999999652  334689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       137 ikp~Nil~~~~~~~~l~Dfg  156 (288)
T 3kfa_A          137 LAARNCLVGENHLVKVADFG  156 (288)
T ss_dssp             CSGGGEEECGGGCEEECCCC
T ss_pred             CCcceEEEcCCCCEEEccCc
Confidence            99999999999999999997

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.82  E-value=6.7e-22  Score=155.83  Aligned_cols=95  Identities=25%  Similarity=0.349  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        93 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d  166 (335)
T 2owb_A           93 SIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRD  166 (335)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCeEEEEEec--CCeEEEEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecC
Confidence            45567789999999999876  4678999999999999998864    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       167 lkp~NIl~~~~~~~kl~Dfg~  187 (335)
T 2owb_A          167 LKLGNLFLNEDLEVKIGDFGL  187 (335)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CCchhEEEcCCCCEEEeeccC
Confidence            999999999999999999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.82  E-value=2.7e-22  Score=164.62  Aligned_cols=94  Identities=27%  Similarity=0.400  Sum_probs=81.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++....    ...+++||||+++ +|.+.+.      ..+++..++.++.||+.||.|||++||
T Consensus       113 ~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~i  185 (464)
T 3ttj_A          113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGI  185 (464)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            5567789999999999986532    1356999999997 6776652      248999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       186 iHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          186 IHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccCCCChHhEEEeCCCCEEEEEEEe
Confidence            9999999999999999999999984

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.82  E-value=9.7e-22  Score=149.79  Aligned_cols=95  Identities=19%  Similarity=0.217  Sum_probs=85.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  ++..++||||+++|+|.+++...   +..+++..+..++.|+++||.|||++||+|||
T Consensus        55 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  129 (267)
T 3t9t_A           55 EVMMKLSHPKLVQLYGVCLE--QAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  129 (267)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSCEEEECCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred             HHHHhCCCCCEeeEEEEEcc--CCCeEEEEeCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            34556789999999999876  46789999999999999998642   34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       130 l~p~Nili~~~~~~kl~dfg  149 (267)
T 3t9t_A          130 LAARNCLVGENQVIKVSDFG  149 (267)
T ss_dssp             CCGGGEEECGGGCEEECCTT
T ss_pred             CchheEEECCCCCEEEcccc
Confidence            99999999999999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.82  E-value=1.1e-21  Score=153.04  Aligned_cols=101  Identities=22%  Similarity=0.311  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh---HHHHHHhhhcCCChHHHHHHHH--HhcCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ---ELFLVLELADQGDLALVIAECR--QKKCHLAECLVWSYFRQIAAALQYVHSRR  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~---~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  189 (215)
                      .....++||||+++++++......   ..++||||+++|+|.+++....  .....+++..++.++.|+++||.|||++|
T Consensus        88 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (313)
T 3brb_A           88 ACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN  167 (313)
T ss_dssp             HHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            445677899999999998764322   2389999999999999985432  22346999999999999999999999999


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||||||+|||++.++.+||+|||.
T Consensus       168 ivH~dikp~NIli~~~~~~kl~Dfg~  193 (313)
T 3brb_A          168 FLHRDLAARNCMLRDDMTVCVADFGL  193 (313)
T ss_dssp             CCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred             cccCCCCcceEEEcCCCcEEEeecCc
Confidence            99999999999999999999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=5.6e-22  Score=163.97  Aligned_cols=95  Identities=23%  Similarity=0.345  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  .+..++|||||++|+|.+.+..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        88 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  161 (494)
T 3lij_A           88 AVLKLLDHPNIMKLYDFFED--KRNYYLVMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD  161 (494)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCeEEEEEEe--CCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence            55677899999999999976  5678999999999999998865    23699999999999999999999999999999


Q ss_pred             cchhhhhhhcc---ceeecccccC
Q psy18117        195 ERETFLSVLGD---CVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~---~~~ki~D~~~  215 (215)
                      |||+|||++..   +.+||+|||.
T Consensus       162 lkp~Nil~~~~~~~~~~kl~DfG~  185 (494)
T 3lij_A          162 LKPENLLLESKEKDALIKIVDFGL  185 (494)
T ss_dssp             CSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CChhhEEEeCCCCCCcEEEEECCC
Confidence            99999999764   4699999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.82  E-value=7e-22  Score=162.96  Aligned_cols=94  Identities=26%  Similarity=0.339  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  .+..++|||||.+|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        78 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  151 (484)
T 3nyv_A           78 QLLKQLDHPNIMKLYEFFED--KGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRD  151 (484)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCCCcEEEEEEe--CCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence            45667789999999999976  5678999999999999998854    44699999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeeccccc
Q psy18117        195 ERETFLSV---LGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~  214 (215)
                      |||+|||+   +.++.+||+|||
T Consensus       152 lkp~Nil~~~~~~~~~~kl~Dfg  174 (484)
T 3nyv_A          152 LKPENLLLESKSKDANIRIIDFG  174 (484)
T ss_dssp             CCGGGEEESSSSTTCCEEECCTT
T ss_pred             CCHHHEEEecCCCCCcEEEEeee
Confidence            99999999   466899999998

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.82  E-value=4.1e-22  Score=156.42  Aligned_cols=98  Identities=21%  Similarity=0.288  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+.......+++||||+++|+|.+++...   +..+++..+..++.|+++||.|||++||+|||
T Consensus        94 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d  170 (326)
T 2w1i_A           94 EILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKRYIHRD  170 (326)
T ss_dssp             HHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            455677899999999988764445688999999999999999652   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       171 ikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          171 LATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             CCGGGEEEEETTEEEECCCTT
T ss_pred             CCcceEEEcCCCcEEEecCcc
Confidence            999999999999999999984

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.82  E-value=7.5e-22  Score=151.45  Aligned_cols=98  Identities=20%  Similarity=0.276  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+... .+..++||||+++|+|.+++.....  ..+++..++.++.|++.||.|||++||+|||
T Consensus        66 ~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  142 (278)
T 1byg_A           66 SVMTQLRHSNLVQLLGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  142 (278)
T ss_dssp             HHHTTCCCTTBCCEEEEECCC---CCEEEECCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEEcC-CCceEEEEecCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence            455677899999999986543 3568999999999999999976432  2378999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       143 lkp~Nil~~~~~~~~l~Dfg~  163 (278)
T 1byg_A          143 LAARNVLVSEDNVAKVSDFGL  163 (278)
T ss_dssp             CSGGGEEECTTSCEEECCCCC
T ss_pred             CCcceEEEeCCCcEEEeeccc
Confidence            999999999999999999983

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.82  E-value=5.6e-22  Score=152.03  Aligned_cols=95  Identities=23%  Similarity=0.351  Sum_probs=84.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  .+..++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  131 (277)
T 3f3z_A           58 EIMKSLDHPNIIRLYETFED--NTDIYLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRD  131 (277)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeeEEEEEec--CCeEEEEEeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            44566789999999999876  4678999999999999998865    23589999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeecccccC
Q psy18117        195 ERETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~~  215 (215)
                      |||+|||+   +.++.+||+|||.
T Consensus       132 lkp~Nil~~~~~~~~~~~l~Dfg~  155 (277)
T 3f3z_A          132 LKPENFLFLTDSPDSPLKLIDFGL  155 (277)
T ss_dssp             CSGGGEEESSSSTTCCEEECCCTT
T ss_pred             CCHHHEEEecCCCCCcEEEEeccc
Confidence            99999999   7788999999983

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.82  E-value=8.7e-22  Score=152.56  Aligned_cols=92  Identities=20%  Similarity=0.234  Sum_probs=81.1

Q ss_pred             cCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH--------hC
Q psy18117        119 TLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH--------SR  188 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH--------~~  188 (215)
                      .++||||+++++.+...  ....+++||||+++|+|.++++     +..+++..++.++.|++.||.|||        ++
T Consensus        58 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~  132 (301)
T 3q4u_A           58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP  132 (301)
T ss_dssp             CCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC
T ss_pred             hccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC
Confidence            37899999999876432  1345889999999999999984     236999999999999999999999        99


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       133 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A          133 AIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            999999999999999999999999984

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.82  E-value=5.9e-22  Score=160.73  Aligned_cols=102  Identities=29%  Similarity=0.285  Sum_probs=85.7

Q ss_pred             cccCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ++.+++.++||||++++++|....    ...+++||||+++ +|.+.+......+..+++..++.++.||++||.|||++
T Consensus        97 E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (420)
T 1j1b_A           97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  175 (420)
T ss_dssp             HHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            346678889999999988875321    2236789999997 88888776555566799999999999999999999999


Q ss_pred             Cccccccchhhhhhhcc-ceeecccccC
Q psy18117        189 RILHRGERETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~-~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.+ +.+||+|||.
T Consensus       176 ~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          176 GICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CccccCCChhhEEEeCCCCeEEeccchh
Confidence            99999999999999965 6899999984

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.82  E-value=2.2e-22  Score=157.44  Aligned_cols=96  Identities=18%  Similarity=0.271  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.......+++||||+++|+|.+++..     ..+++..++.++.|++.||.|||++||+|||
T Consensus        85 ~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~D  159 (318)
T 3lxp_A           85 DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQHYIHRD  159 (318)
T ss_dssp             HHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            45667789999999999876544678899999999999999843     2489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       160 ikp~Nil~~~~~~~kl~Dfg~  180 (318)
T 3lxp_A          160 LAARNVLLDNDRLVKIGDFGL  180 (318)
T ss_dssp             CSGGGEEECTTCCEEECCGGG
T ss_pred             CchheEEEcCCCCEEECCccc
Confidence            999999999999999999983

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.82  E-value=4.2e-22  Score=156.27  Aligned_cols=95  Identities=25%  Similarity=0.349  Sum_probs=85.4

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.+++.++||||+++++++..  .+..++||||+++ +|.+++...   +..+++..++.++.|++.||.|||++||+||
T Consensus        51 ~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~  124 (324)
T 3mtl_A           51 VSLLKDLKHANIVTLHDIIHT--EKSLTLVFEYLDK-DLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQKVLHR  124 (324)
T ss_dssp             HHHHSCCCCTTBCCEEEEEEC--SSCEEEEEECCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             HHHHHhcCCCCCCeeeeEEee--CCEEEEEeccccc-CHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence            366778899999999999876  4678999999996 999988653   3358999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeeccccc
Q psy18117        194 GERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||||+|||++.++.+||+|||
T Consensus       125 Dikp~NIl~~~~~~~kl~Dfg  145 (324)
T 3mtl_A          125 DLKPQNLLINERGELKLADFG  145 (324)
T ss_dssp             SCCGGGEEECTTCCEEECSSS
T ss_pred             CcCHHHEEECCCCCEEEccCc
Confidence            999999999999999999998

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.82  E-value=9.4e-22  Score=156.30  Aligned_cols=95  Identities=20%  Similarity=0.272  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHR  193 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~Hr  193 (215)
                      .++..++||||+++++.+..  ++..++||||+++|+|.+++...    ..+++..+..++.|++.||.|||++ ||+||
T Consensus        83 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~  156 (360)
T 3eqc_A           83 QVLHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHKIMHR  156 (360)
T ss_dssp             GGGGGCCCTTBCCEEEEEEE--TTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             HHHHHCCCCCEEEEeEEEEE--CCEEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcC
Confidence            55677889999999999876  56789999999999999999652    3589999999999999999999996 99999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       157 dlkp~Nil~~~~~~~kl~Dfg~  178 (360)
T 3eqc_A          157 DVKPSNILVNSRGEIKLCDFGV  178 (360)
T ss_dssp             CCSGGGEEECTTCCEEECCCCC
T ss_pred             CccHHHEEECCCCCEEEEECCC
Confidence            9999999999999999999983

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.82  E-value=6.4e-22  Score=155.54  Aligned_cols=95  Identities=19%  Similarity=0.135  Sum_probs=83.8

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+...+ +||||+++++.+..  ++..++||||+ +|+|.+++...   +..+++..+..++.|++.||.|||++||+||
T Consensus        56 ~~l~~l~~h~~i~~~~~~~~~--~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHr  129 (330)
T 2izr_A           56 RFYKQLGSGDGIPQVYYFGPC--GKYNAMVLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKNLIYR  129 (330)
T ss_dssp             HHHHHHCSCTTSCCEEEEEEE--TTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHhhCCCCCCEEEEEEec--CCccEEEEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            344556 89999999998876  56789999999 88999998653   3469999999999999999999999999999


Q ss_pred             ccchhhhhhhccce-----eecccccC
Q psy18117        194 GERETFLSVLGDCV-----RTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~-----~ki~D~~~  215 (215)
                      ||||+|||++.++.     +||+|||.
T Consensus       130 Dlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A          130 DVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             CCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             CCCHHHeeeccCCCCCCceEEEEEccc
Confidence            99999999999987     99999984

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.82  E-value=7.7e-22  Score=155.09  Aligned_cols=93  Identities=27%  Similarity=0.398  Sum_probs=82.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ++..++||||+++ +|.+++..    ...+++..++.++.||+.||.|||++||+|||
T Consensus        85 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~D  157 (329)
T 3gbz_A           85 SLLKELQHRNIIELKSVIHH--NHRLHLIFEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD  157 (329)
T ss_dssp             HHGGGCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHHcCCCCcceEEEEEec--CCEEEEEEecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCC
Confidence            56678899999999999876  5678999999996 99999864    34599999999999999999999999999999


Q ss_pred             cchhhhhhh-----ccceeeccccc
Q psy18117        195 ERETFLSVL-----GDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~-----~~~~~ki~D~~  214 (215)
                      |||+|||++     .++.+||+|||
T Consensus       158 lkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          158 LKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             CCGGGEEEEC-----CCEEEECCTT
T ss_pred             CCHHHEEEecCCCCccceEEECcCC
Confidence            999999994     45569999998

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=7.1e-22  Score=163.73  Aligned_cols=95  Identities=24%  Similarity=0.388  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+  ...+++|||||++|+|.+++..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        98 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~D  171 (504)
T 3q5i_A           98 SLLKSLDHPNIIKLFDVFED--KKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKHNIVHRD  171 (504)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCCeEEEEEEc--CCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence            45667889999999999976  5678999999999999999865    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeecccccC
Q psy18117        195 ERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |||+|||++.++   .+||+|||.
T Consensus       172 lkp~Nil~~~~~~~~~~kl~Dfg~  195 (504)
T 3q5i_A          172 IKPENILLENKNSLLNIKIVDFGL  195 (504)
T ss_dssp             CSGGGEEESSTTCCSSEEECCCTT
T ss_pred             CcHHHEEEecCCCCccEEEEECCC
Confidence            999999998876   699999984

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.82  E-value=1.5e-21  Score=155.14  Aligned_cols=92  Identities=15%  Similarity=0.134  Sum_probs=81.0

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      .+.||||+++++.+..  .+..++||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+
T Consensus        92 ~~~h~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  166 (360)
T 3llt_A           92 DINNNNIVKYHGKFMY--YDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPE  166 (360)
T ss_dssp             STTGGGBCCEEEEEEE--TTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             CCCCCCeecccceeeE--CCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcc
Confidence            4569999999999876  46789999999 77999999753  2335899999999999999999999999999999999


Q ss_pred             hhhhhc-------------------------cceeecccccC
Q psy18117        199 FLSVLG-------------------------DCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~-------------------------~~~~ki~D~~~  215 (215)
                      |||++.                         ++.+||+|||.
T Consensus       167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~  208 (360)
T 3llt_A          167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC  208 (360)
T ss_dssp             GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTT
T ss_pred             cEEEccccccccccchhcccccccccccccCCCCEEEEeccC
Confidence            999975                         78999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.81  E-value=8e-22  Score=162.74  Aligned_cols=95  Identities=23%  Similarity=0.325  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ...+++|||||.+|+|.+.+...    ..+++..++.++.||+.||.|||++||+|||
T Consensus        73 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~D  146 (486)
T 3mwu_A           73 ELLKKLDHPNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHNIVHRD  146 (486)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCcCeEEEEEEc--CCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence            55677899999999999876  56789999999999999988652    3699999999999999999999999999999


Q ss_pred             cchhhhhhh---ccceeecccccC
Q psy18117        195 ERETFLSVL---GDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~---~~~~~ki~D~~~  215 (215)
                      |||+|||++   .++.+||+|||.
T Consensus       147 lkp~Nil~~~~~~~~~~kl~Dfg~  170 (486)
T 3mwu_A          147 LKPENILLESKEKDCDIKIIDFGL  170 (486)
T ss_dssp             CSGGGEEESSSSTTCCEEECSCSC
T ss_pred             CchHHEEEecCCCCCCEEEEECCc
Confidence            999999995   455899999984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.81  E-value=7e-22  Score=154.77  Aligned_cols=95  Identities=22%  Similarity=0.353  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ....++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        67 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~d  140 (321)
T 2a2a_A           67 SILRQVLHHNVITLHDVYEN--RTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFD  140 (321)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCcceEEEEEec--CCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            44567789999999999876  4678999999999999999853    45699999999999999999999999999999


Q ss_pred             cchhhhhhhccc----eeecccccC
Q psy18117        195 ERETFLSVLGDC----VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~----~~ki~D~~~  215 (215)
                      |||+|||++.++    .+||+|||.
T Consensus       141 ikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A          141 LKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             CSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             CChHHEEEecCCCCcCCEEEccCcc
Confidence            999999999888    799999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.81  E-value=1.1e-21  Score=154.31  Aligned_cols=94  Identities=19%  Similarity=0.195  Sum_probs=79.9

Q ss_pred             CccCCCcchhhhhhhhc---CCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-----
Q psy18117        117 DKTLHHPNIVELRSAFA---SRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-----  188 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~---~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-----  188 (215)
                      ...++||||+++++.+.   .......++||||+++|+|.+++..     ...++..++.++.|+++||.|||++     
T Consensus        61 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~  135 (336)
T 3g2f_A           61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGD  135 (336)
T ss_dssp             STTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGG
T ss_pred             HHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence            45678999999986432   1113357899999999999999954     2368889999999999999999999     


Q ss_pred             ----CccccccchhhhhhhccceeecccccC
Q psy18117        189 ----RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ----~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                          ||+||||||+|||++.++.+||+|||.
T Consensus       136 ~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~  166 (336)
T 3g2f_A          136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGL  166 (336)
T ss_dssp             GCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred             ccccceeecccccceEEEcCCCcEEEeeccc
Confidence                999999999999999999999999984

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=1.2e-21  Score=151.59  Aligned_cols=97  Identities=18%  Similarity=0.193  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++... +...+++|||+.+|+|.+++..   ....+++..+..++.|++.||.|||++||+|||
T Consensus        74 ~~l~~l~h~~iv~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  149 (298)
T 3pls_A           74 LLMRGLNHPNVLALIGIMLPP-EGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRD  149 (298)
T ss_dssp             HHHHTCCCTTBCCCCEEECCS-SSCCEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCeeeEEEEEecC-CCCcEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            455677899999999998763 2344899999999999999854   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       150 ikp~Nili~~~~~~kl~Dfg~  170 (298)
T 3pls_A          150 LAARNCMLDESFTVKVADFGL  170 (298)
T ss_dssp             CSGGGEEECTTCCEEECCTTS
T ss_pred             CCcceEEEcCCCcEEeCcCCC
Confidence            999999999999999999983

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.81  E-value=1.1e-21  Score=152.87  Aligned_cols=98  Identities=20%  Similarity=0.238  Sum_probs=84.9

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH--------------hcCCchhHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ--------------KKCHLAECLVWSYFRQIA  179 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~--------------~~~~~~~~~~~~~~~ql~  179 (215)
                      ..+..+ +||||+++++.+..  ++..++||||+++|+|.+++.....              ....+++..++.++.|++
T Consensus        78 ~~l~~l~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~  155 (313)
T 1t46_A           78 KVLSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVA  155 (313)
T ss_dssp             HHHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHH
T ss_pred             HHHhhcccCCCeeeEEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHH
Confidence            344555 89999999999876  4678999999999999999975321              122489999999999999


Q ss_pred             HHHHHHHhCCccccccchhhhhhhccceeeccccc
Q psy18117        180 AALQYVHSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       180 ~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      +||.|||++||+||||||+|||++.++.+||+|||
T Consensus       156 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  190 (313)
T 1t46_A          156 KGMAFLASKNCIHRDLAARNILLTHGRITKICDFG  190 (313)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCG
T ss_pred             HHHHHHHHCCeecCCCccceEEEcCCCCEEEcccc
Confidence            99999999999999999999999999999999998

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.81  E-value=8.7e-22  Score=151.33  Aligned_cols=94  Identities=23%  Similarity=0.288  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +..++||||+++|+|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        65 ~~l~~l~h~~i~~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  138 (281)
T 3cc6_A           65 VIMKNLDHPHIVKLIGIIEE---EPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESINCVHRD  138 (281)
T ss_dssp             HHHHHHCCTTBCCEEEEECS---SSCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCCCcceEEEEEcC---CCCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            44566789999999998764   3568999999999999999653   33589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       139 lkp~Nil~~~~~~~kl~Dfg  158 (281)
T 3cc6_A          139 IAVRNILVASPECVKLGDFG  158 (281)
T ss_dssp             CSGGGEEEEETTEEEECCCC
T ss_pred             CccceEEECCCCcEEeCccC
Confidence            99999999999999999997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=4.1e-22  Score=158.95  Aligned_cols=95  Identities=23%  Similarity=0.365  Sum_probs=83.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++.....    ..+++||||+ +++|.+++..     ..+++..++.++.|++.||.|||++||
T Consensus        76 ~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~i  149 (367)
T 1cm8_A           76 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGI  149 (367)
T ss_dssp             HHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            45677889999999999865321    3468999999 6699999854     258999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       150 vH~Dlkp~NIll~~~~~~kl~Dfg~  174 (367)
T 1cm8_A          150 IHRDLKPGNLAVNEDCELKILDFGL  174 (367)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cccCcCHHHEEEcCCCCEEEEeeec
Confidence            9999999999999999999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.81  E-value=1.2e-21  Score=151.51  Aligned_cols=95  Identities=25%  Similarity=0.349  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++||||+++++.+..  .+..++||||+++++|.+++..    +..+++..++.++.|+++||.|||++||+|||
T Consensus        67 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  140 (294)
T 2rku_A           67 SIHRSLAHQHVVGFHGFFED--NDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRD  140 (294)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeeeeeeecc--CCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            44566789999999999876  4678999999999999998854    23689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       141 l~p~Nil~~~~~~~kl~dfg~  161 (294)
T 2rku_A          141 LKLGNLFLNEDLEVKIGDFGL  161 (294)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CChHhEEEcCCCCEEEEeccC
Confidence            999999999999999999984

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.81  E-value=5.2e-22  Score=157.31  Aligned_cols=95  Identities=18%  Similarity=0.255  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ++..++||||+.+ +|.+++...   +..+++..+..++.|+++||.|||++||+|||
T Consensus       106 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~g-~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  179 (348)
T 1u5q_A          106 RFLQKLRHPNTIQYRGCYLR--EHTAWLVMEYCLG-SASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  179 (348)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHhCCCCCEeeEEEEEEE--CCeEEEEEecCCC-CHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            45667889999999999876  5678999999985 888887542   34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       180 lkp~NIll~~~~~~kL~DfG~  200 (348)
T 1u5q_A          180 VKAGNILLSEPGLVKLGDFGS  200 (348)
T ss_dssp             CSGGGEEEETTTEEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEeeccC
Confidence            999999999999999999984

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.81  E-value=7e-22  Score=152.53  Aligned_cols=91  Identities=14%  Similarity=0.085  Sum_probs=79.6

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      ....++||||+++++++..  ++..++||||+++++|.++++.      ......+..++.|++.||.|||++||+||||
T Consensus        84 ~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~------~~~~~~~~~i~~ql~~aL~~lH~~givH~Di  155 (286)
T 3uqc_A           84 RLSRIDKPGVARVLDVVHT--RAGGLVVAEWIRGGSLQEVADT------SPSPVGAIRAMQSLAAAADAAHRAGVALSID  155 (286)
T ss_dssp             HHHTCCCTTBCCEEEEEEE--TTEEEEEEECCCEEEHHHHHTT------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHhcCCCCCcceeeEEEEE--CCcEEEEEEecCCCCHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence            3467789999999999876  4678999999999999999842      1345578889999999999999999999999


Q ss_pred             chhhhhhhccceeeccccc
Q psy18117        196 RETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~  214 (215)
                      ||+|||++.+|.+||++.+
T Consensus       156 kp~NIll~~~g~~kl~~~~  174 (286)
T 3uqc_A          156 HPSRVRVSIDGDVVLAYPA  174 (286)
T ss_dssp             SGGGEEEETTSCEEECSCC
T ss_pred             CcccEEEcCCCCEEEEecc
Confidence            9999999999999998764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.81  E-value=9.5e-22  Score=151.32  Aligned_cols=95  Identities=23%  Similarity=0.389  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++|||++++++.+..  .+..++||||+++|+|.+++...    ..+++..++.++.|+++||.|||++||+|||
T Consensus        66 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  139 (284)
T 2vgo_A           66 EIQSHLRHPNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHERKVIHRD  139 (284)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHhcCCCCCEeeEEEEEEc--CCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence            44567789999999999876  46789999999999999998652    3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       140 l~p~Nil~~~~~~~kl~Dfg~  160 (284)
T 2vgo_A          140 IKPENLLMGYKGELKIADFGW  160 (284)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHEEEcCCCCEEEecccc
Confidence            999999999999999999983

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.81  E-value=9.3e-22  Score=150.88  Aligned_cols=96  Identities=24%  Similarity=0.383  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++||||+++++|.+++..   ....+++..++.++.|+++||.|||++||+|||
T Consensus        63 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  137 (278)
T 3cok_A           63 KIHCQLKHPSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLYLHSHGILHRD  137 (278)
T ss_dssp             HHHTTBCCTTBCCEEEEEEC--SSEEEEEEECCTTEEHHHHHHT---CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSS
T ss_pred             HHHHhCCCCCeEeEEEEEcc--CCeEEEEEecCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            44567789999999999876  4678999999999999999854   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       138 l~p~Nili~~~~~~kl~dfg~  158 (278)
T 3cok_A          138 LTLSNLLLTRNMNIKIADFGL  158 (278)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHEEEcCCCCEEEEeecc
Confidence            999999999999999999973

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.81  E-value=1.2e-21  Score=152.34  Aligned_cols=98  Identities=17%  Similarity=0.184  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  .+..++||||+++|+|.+++... .....+++..++.++.|++.||.|||++||+|||
T Consensus        82 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  158 (307)
T 2nru_A           82 KVMAKCQHENLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRD  158 (307)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCeEEEEEEEec--CCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence            45567789999999999876  46789999999999999998642 2234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       159 lkp~Nili~~~~~~kl~Dfg~  179 (307)
T 2nru_A          159 IKSANILLDEAFTAKISDFGL  179 (307)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             CCHHHEEEcCCCcEEEeeccc
Confidence            999999999999999999983

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.81  E-value=6.5e-22  Score=160.42  Aligned_cols=94  Identities=26%  Similarity=0.434  Sum_probs=82.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..   +..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus       192 ~~l~~l~hpniv~l~~~~~~---~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD  264 (419)
T 3i6u_A          192 EILKKLNHPCIIKIKNFFDA---EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRD  264 (419)
T ss_dssp             HHHHHCCCTTBCCCCEEEES---SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEec---CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            56678899999999998754   357899999999999988743    44699999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeecccccC
Q psy18117        195 ERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |||+|||++.++   .+||+|||.
T Consensus       265 lkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          265 LKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             CCGGGEEESSSSSSCCEEECCSST
T ss_pred             CChHhEEEecCCCcceEEEeeccc
Confidence            999999997554   699999984

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.81  E-value=8.9e-22  Score=153.31  Aligned_cols=95  Identities=25%  Similarity=0.289  Sum_probs=85.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||+++++++..  .+..++||||+++++|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~d  127 (311)
T 4agu_A           54 RMLKQLKHPNLVNLLEVFRR--KRRLHLVFEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD  127 (311)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCccchhheeec--CCeEEEEEEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            45567789999999999876  5678999999999888887643    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       128 lkp~Nil~~~~~~~kl~Dfg~  148 (311)
T 4agu_A          128 VKPENILITKHSVIKLCDFGF  148 (311)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CChhhEEEcCCCCEEEeeCCC
Confidence            999999999999999999984

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.81  E-value=1.2e-21  Score=150.40  Aligned_cols=96  Identities=18%  Similarity=0.275  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++|||++++++.+..   +..++||||+++|+|.+++.....  ..+++..+..++.|++.||.|||++||+|||
T Consensus        60 ~~l~~l~h~~i~~~~~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  134 (279)
T 1qpc_A           60 NLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEERNYIHRD  134 (279)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCcCcceEEEEEcC---CCcEEEEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            44567789999999988753   458899999999999999865332  2589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 ikp~Nil~~~~~~~kl~Dfg~  155 (279)
T 1qpc_A          135 LRAANILVSDTLSCKIADFGL  155 (279)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCHhhEEEcCCCCEEECCCcc
Confidence            999999999999999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.81  E-value=1.5e-21  Score=151.08  Aligned_cols=98  Identities=24%  Similarity=0.375  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCC-----------chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASR-----------SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~-----------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      .+...++|||++++++.+...           .....++||||+++|+|.+++..   .+..+++..++.++.|++.||.
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~  130 (303)
T 1zy4_A           54 MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEALS  130 (303)
T ss_dssp             HHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHHHH
Confidence            445667899999998876432           13567899999999999999964   2335788999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||++||+||||||+|||++.++.+||+|||.
T Consensus       131 ~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A          131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             HHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             HHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence            99999999999999999999999999999983

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.81  E-value=1.8e-21  Score=153.17  Aligned_cols=98  Identities=21%  Similarity=0.295  Sum_probs=84.0

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHH
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      ++..+ +||||+++++.+..  .+..++||||+++|+|.+++.....            ....+++..++.++.|+++||
T Consensus        93 ~l~~l~~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  170 (334)
T 2pvf_A           93 MMKMIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  170 (334)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCEeeEEEEEcc--CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            34455 79999999999876  4678999999999999999965221            112488999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+|||++.++.+||+|||.
T Consensus       171 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  203 (334)
T 2pvf_A          171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGL  203 (334)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             HHHHhCCeeCCCCccceEEEcCCCCEEEccccc
Confidence            999999999999999999999999999999983

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.81  E-value=1.9e-21  Score=151.50  Aligned_cols=95  Identities=21%  Similarity=0.226  Sum_probs=85.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++++..  ++..++||||+++++|.+++...    ..+++..++.++.|+++||.|||++||+|||
T Consensus        86 ~~l~~l~hp~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d  159 (309)
T 2h34_A           86 RTAGRLQEPHVVPIHDFGEI--DGQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAAGATHRD  159 (309)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHhhcCCCCeeEEEEEEee--CCeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCC
Confidence            45567789999999998876  56789999999999999998652    3699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       160 lkp~NIl~~~~~~~kl~Dfg~  180 (309)
T 2h34_A          160 VKPENILVSADDFAYLVDFGI  180 (309)
T ss_dssp             CCGGGEEECTTSCEEECSCCC
T ss_pred             CChHHEEEcCCCCEEEecCcc
Confidence            999999999999999999983

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.80  E-value=7e-22  Score=152.55  Aligned_cols=95  Identities=16%  Similarity=0.199  Sum_probs=81.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++|||++.+++...   ....++||||+++++|.+++...   +..+++..+..++.|++.||.|||++||+|||
T Consensus        72 ~~l~~l~h~~iv~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~D  145 (289)
T 3og7_A           72 GVLRKTRHVNILLFMGYST---APQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKSIIHRD  145 (289)
T ss_dssp             HHHTTCCCTTBCCEEEEEC---SSSCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCcEEEEEeecc---CCccEEEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            4566778999999998653   35688999999999999998542   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       146 lkp~Nil~~~~~~~kl~Dfg~  166 (289)
T 3og7_A          146 LKSNNIFLHEDNTVKIGDFGL  166 (289)
T ss_dssp             CCGGGEEEETTTEEEECCCC-
T ss_pred             CccceEEECCCCCEEEcccee
Confidence            999999999999999999983

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.80  E-value=1.9e-21  Score=150.24  Aligned_cols=94  Identities=17%  Similarity=0.308  Sum_probs=84.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+.   .+..++||||+++++|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        70 ~~l~~l~h~~i~~~~~~~~---~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  142 (291)
T 1xbb_A           70 NVMQQLDNPYIVRMIGICE---AESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRD  142 (291)
T ss_dssp             HHHHTCCCTTBCCEEEEEE---SSSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEEEEEEEEC---CCCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCC
Confidence            4456678999999999884   3567899999999999999965    34599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       143 ikp~Nil~~~~~~~kl~Dfg~  163 (291)
T 1xbb_A          143 LAARNVLLVTQHYAKISDFGL  163 (291)
T ss_dssp             CSGGGEEEEETTEEEECCCTT
T ss_pred             CCcceEEEeCCCcEEEccCCc
Confidence            999999999999999999984

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.80  E-value=1.9e-21  Score=151.42  Aligned_cols=94  Identities=23%  Similarity=0.341  Sum_probs=80.7

Q ss_pred             cCCCcchhhhhhhhcCCchh---HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        119 TLHHPNIVELRSAFASRSGQ---ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      .+.||||+++++++......   .++++|||+.+ +|.+++...  ....+++..++.++.|++.||.|||++||+||||
T Consensus        70 ~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dl  146 (308)
T 3g33_A           70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL  146 (308)
T ss_dssp             HHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             hcCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            44699999999988653211   47899999985 999998652  2234899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       147 kp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A          147 KPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             CTTTEEECTTSCEEECSCSC
T ss_pred             CHHHEEEcCCCCEEEeeCcc
Confidence            99999999999999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=1.8e-21  Score=151.10  Aligned_cols=98  Identities=20%  Similarity=0.372  Sum_probs=83.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+...+.+..++||||++++ |.+++...  ....+++..++.++.|+++||.|||++||+|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d  134 (305)
T 2wtk_C           58 QLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKD  134 (305)
T ss_dssp             HHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence            455677899999999988654456789999999985 87777553  234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 lkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C          135 IKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CCcccEEEcCCCcEEeecccc
Confidence            999999999999999999973

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.80  E-value=2.4e-21  Score=148.33  Aligned_cols=94  Identities=21%  Similarity=0.371  Sum_probs=84.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.++||||+++++.+..  .+..++||||+++++|.+++...    ..+++..++.++.|++.||.|||++||+|||
T Consensus        63 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  136 (276)
T 2h6d_A           63 QNLKLFRHPHIIKLYQVIST--PTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRHMVVHRD  136 (276)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred             HHHhcCCCCCEeEEEEEEec--CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            34566789999999999876  46789999999999999999652    3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       137 l~p~Nil~~~~~~~~l~dfg  156 (276)
T 2h6d_A          137 LKPENVLLDAHMNAKIADFG  156 (276)
T ss_dssp             CCGGGEEECTTSCEEECCCC
T ss_pred             CChhhEEECCCCCEEEeecc
Confidence            99999999999999999997

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=6.7e-22  Score=156.13  Aligned_cols=99  Identities=27%  Similarity=0.313  Sum_probs=83.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH----------------------------------
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR----------------------------------  160 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~----------------------------------  160 (215)
                      .+++.++||||+++++++..  .+..++|||||++|+|.+++....                                  
T Consensus        80 ~~l~~l~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (345)
T 3hko_A           80 RLMKKLHHPNIARLYEVYED--EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGF  157 (345)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--C
T ss_pred             HHHHhCCCCCcceeehhhcc--CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence            45667789999999999976  567899999999999999873100                                  


Q ss_pred             --HhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccc--eeecccccC
Q psy18117        161 --QKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDC--VRTVSEQAK  215 (215)
Q Consensus       161 --~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~--~~ki~D~~~  215 (215)
                        .....+++..++.++.|+++||.|||++||+||||||+|||++.++  .+||+|||.
T Consensus       158 ~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~  216 (345)
T 3hko_A          158 RESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGL  216 (345)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTT
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccc
Confidence              0011257888999999999999999999999999999999998777  899999983

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.80  E-value=3.4e-21  Score=164.07  Aligned_cols=95  Identities=22%  Similarity=0.381  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +..++||||+++|+|.+++..   .+..+++..+..++.|++.||.|||++||+|||
T Consensus       443 ~~l~~l~HpnIv~l~~~~~~---~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD  516 (656)
T 2j0j_A          443 LTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTALAYLESKRFVHRD  516 (656)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCCCeEEEEEec---CceEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence            44567789999999998743   468899999999999999864   234589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       517 ikp~NILl~~~~~vkL~DFG~  537 (656)
T 2j0j_A          517 IAARNVLVSSNDCVKLGDFGL  537 (656)
T ss_dssp             CSGGGEEEEETTEEEECCCCC
T ss_pred             cchHhEEEeCCCCEEEEecCC
Confidence            999999999999999999984

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.80  E-value=2.1e-21  Score=155.03  Aligned_cols=73  Identities=14%  Similarity=0.074  Sum_probs=63.4

Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHH------HHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeeccc
Q psy18117        139 ELFLVLELADQGDLALVIAECRQKKCHLAECLV------WSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSE  212 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~------~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D  212 (215)
                      .+++||||++ |+|.+++.....   .+++...      ..++.||++||.|||++||+||||||+|||++.++.+||+|
T Consensus       162 ~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D  237 (371)
T 3q60_A          162 NYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD  237 (371)
T ss_dssp             EEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECC
T ss_pred             eEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEe
Confidence            4799999999 699999987533   3445555      57779999999999999999999999999999999999999


Q ss_pred             ccC
Q psy18117        213 QAK  215 (215)
Q Consensus       213 ~~~  215 (215)
                      ||.
T Consensus       238 FG~  240 (371)
T 3q60_A          238 VSA  240 (371)
T ss_dssp             GGG
T ss_pred             cce
Confidence            983

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.80  E-value=1.7e-21  Score=151.93  Aligned_cols=97  Identities=23%  Similarity=0.333  Sum_probs=83.1

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------------cCCchhHHHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCHLAECLVWSYFRQIAAALQ  183 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------------~~~~~~~~~~~~~~ql~~~l~  183 (215)
                      +..+ +||||+++++.+... +...++||||+++|+|.+++......            +..+++..++.++.|+++||.
T Consensus        84 l~~l~~hp~iv~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~  162 (316)
T 2xir_A           84 LIHIGHHLNVVNLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME  162 (316)
T ss_dssp             HHHHCCCTTBCCEEEEECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHH
T ss_pred             HHhcccCCCeeeEEEEEecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHH
Confidence            3444 689999999988653 34589999999999999999653211            122899999999999999999


Q ss_pred             HHHhCCccccccchhhhhhhccceeeccccc
Q psy18117        184 YVHSRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       184 ~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||++||+||||||+|||++.++.+||+|||
T Consensus       163 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  193 (316)
T 2xir_A          163 FLASRKCIHRDLAARNILLSEKNVVKICDFG  193 (316)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCG
T ss_pred             HHHhCCcccccCccceEEECCCCCEEECCCc
Confidence            9999999999999999999999999999998

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.80  E-value=1.5e-21  Score=151.30  Aligned_cols=95  Identities=24%  Similarity=0.342  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  ++..++||||+++++|.+++...   ...+++..++.++.|++.||.|||++||+|||
T Consensus        68 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  142 (302)
T 2j7t_A           68 EILATCDHPYIVKLLGAYYH--DGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD  142 (302)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--C-CEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHhcCCCCCEeeeeeeeee--CCeEEEEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence            34556789999999999876  46789999999999999988652   34599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       143 lkp~Nil~~~~~~~kl~Dfg  162 (302)
T 2j7t_A          143 LKAGNVLMTLEGDIRLADFG  162 (302)
T ss_dssp             CSGGGEEECTTSCEEECCCH
T ss_pred             CCHHHEEECCCCCEEEEECC
Confidence            99999999999999999997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.80  E-value=2.2e-21  Score=153.80  Aligned_cols=98  Identities=18%  Similarity=0.102  Sum_probs=82.3

Q ss_pred             cCCccCCCcchhhhhhhhcCC--------------chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASR--------------SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA  180 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~--------------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~  180 (215)
                      .+...++|||++++++.+...              .+...++||||+ +|+|.+++...  .+..+++..++.++.|++.
T Consensus        94 ~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~  170 (352)
T 2jii_A           94 NFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLD  170 (352)
T ss_dssp             HHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHH
Confidence            455677899999866544321              135689999999 88999999753  1346999999999999999


Q ss_pred             HHHHHHhCCccccccchhhhhhhccc--eeecccccC
Q psy18117        181 ALQYVHSRRILHRGERETFLSVLGDC--VRTVSEQAK  215 (215)
Q Consensus       181 ~l~~lH~~~i~HrDikp~Nil~~~~~--~~ki~D~~~  215 (215)
                      ||.|||++||+||||||+|||++.++  .+||+|||.
T Consensus       171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~  207 (352)
T 2jii_A          171 ALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGF  207 (352)
T ss_dssp             HHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGG
T ss_pred             HHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcc
Confidence            99999999999999999999999998  999999983

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.80  E-value=2e-21  Score=151.78  Aligned_cols=96  Identities=18%  Similarity=0.222  Sum_probs=84.0

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ......++||||+++++.+..  ....+++|||+++++|.+++..   .+..+++..++.++.|++.||.|||++||+||
T Consensus        80 ~~~l~~l~h~~iv~~~~~~~~--~~~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~  154 (319)
T 2y4i_B           80 VMAYRQTRHENVVLFMGACMS--PPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK  154 (319)
T ss_dssp             GGGGTTCCCTTBCCCCEEEEC--SSCEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHhcCCCCCEeEEEEEEec--CCceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence            366778899999999999876  4578999999999999999853   23368999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++ ++.+||+|||.
T Consensus       155 dlkp~NIl~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B          155 DLKSKNVFYD-NGKVVITDFGL  175 (319)
T ss_dssp             CCCSTTEEEC---CCEECCCSC
T ss_pred             CCChhhEEEe-CCCEEEeecCC
Confidence            9999999998 78999999983

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.1e-21  Score=155.27  Aligned_cols=95  Identities=25%  Similarity=0.393  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+..++||||+++ +|.+++..   ....+++..++.++.|+++||.|||++||+|||
T Consensus        64 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  137 (346)
T 1ua2_A           64 KLLQELSHPNIIGLLDAFGH--KSNISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD  137 (346)
T ss_dssp             HHHHHCCCTTBCCEEEEECC--TTCCEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHhhCCCCCCCeEEEEEee--CCceEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
Confidence            45567789999999999876  5678999999997 88888743   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       138 lkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A          138 LKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             CCGGGEEECTTCCEEECCCGG
T ss_pred             CCHHHEEEcCCCCEEEEeccc
Confidence            999999999999999999983

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.80  E-value=4.5e-21  Score=147.83  Aligned_cols=95  Identities=21%  Similarity=0.275  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+...   ..++||||+++|+|.+++...   +..+++..+..++.|+++||.|||++||+|||
T Consensus        73 ~~l~~l~h~~i~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  146 (291)
T 1u46_A           73 NAMHSLDHRNLIRLYGVVLTP---PMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRD  146 (291)
T ss_dssp             HHHHHCCCTTBCCEEEEECSS---SCEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCcccEEEEEccC---CceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            345667899999999998752   478999999999999998753   23589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       147 ikp~Nili~~~~~~kl~Dfg~  167 (291)
T 1u46_A          147 LAARNLLLATRDLVKIGDFGL  167 (291)
T ss_dssp             CCGGGEEEEETTEEEECCCTT
T ss_pred             CchheEEEcCCCCEEEccccc
Confidence            999999999999999999983

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.80  E-value=3.5e-21  Score=151.11  Aligned_cols=94  Identities=21%  Similarity=0.265  Sum_probs=82.7

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..+. ||||+++++.+........++||||+++++|.+++.       .+++..++.++.|++.||.|||++||+||
T Consensus        82 ~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~  154 (330)
T 3nsz_A           82 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSMGIMHR  154 (330)
T ss_dssp             HHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence            3444554 999999999988755567899999999999998873       28899999999999999999999999999


Q ss_pred             ccchhhhhhhccc-eeecccccC
Q psy18117        194 GERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||||+|||++.++ .+||+|||.
T Consensus       155 Dikp~Nil~~~~~~~~kl~Dfg~  177 (330)
T 3nsz_A          155 DVKPHNVMIDHEHRKLRLIDWGL  177 (330)
T ss_dssp             CCSGGGEEEETTTTEEEECCCTT
T ss_pred             CCCHHHEEEcCCCCEEEEEeCCC
Confidence            9999999999777 999999984

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.80  E-value=3.2e-21  Score=148.28  Aligned_cols=95  Identities=24%  Similarity=0.337  Sum_probs=83.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||+++++.+..  ++..++||||+++|+|.+.+..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  130 (284)
T 3kk8_A           57 RICRKLQHPNIVRLHDSIQE--ESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNGIVHRN  130 (284)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHcCCCCcCeEEEEEEc--CCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCC
Confidence            45567789999999999876  4577999999999999998865    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccce---eecccccC
Q psy18117        195 ERETFLSVLGDCV---RTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~---~ki~D~~~  215 (215)
                      |||+|||++.++.   +||+|||.
T Consensus       131 ikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A          131 LKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             CCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CCHHHEEEecCCCCCcEEEeecee
Confidence            9999999987664   99999984

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.80  E-value=4.8e-21  Score=152.65  Aligned_cols=93  Identities=25%  Similarity=0.395  Sum_probs=83.8

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+ +||||+++++.+..  ....++||||+++|+|.+++..    +..+++..+..++.|++.||.|||++||+||||
T Consensus       153 l~~l~~hp~iv~~~~~~~~--~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dl  226 (365)
T 2y7j_A          153 LRQVAGHPHIITLIDSYES--SSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDL  226 (365)
T ss_dssp             HHHHTTCTTBCCEEEEEEB--SSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HHHhcCCCCEeEEEEEEee--CCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            3444 79999999998876  4678999999999999999864    236999999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.+|.+||+|||.
T Consensus       227 kp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          227 KPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             SGGGEEECTTCCEEECCCTT
T ss_pred             CHHHEEECCCCCEEEEecCc
Confidence            99999999999999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.80  E-value=1.6e-21  Score=154.30  Aligned_cols=96  Identities=15%  Similarity=0.109  Sum_probs=83.5

Q ss_pred             cCCccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .....++||||+++++.+...  .....++||||+ +++|.+++..    ...+++..++.++.|++.||.|||++||+|
T Consensus       100 ~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  174 (345)
T 2v62_A          100 IERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHENEYVH  174 (345)
T ss_dssp             HHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence            345677899999999987652  135789999999 8899999854    226999999999999999999999999999


Q ss_pred             cccchhhhhhhccc--eeecccccC
Q psy18117        193 RGERETFLSVLGDC--VRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~--~~ki~D~~~  215 (215)
                      |||||+|||++.++  .+||+|||.
T Consensus       175 ~Dlkp~NIll~~~~~~~~kL~Dfg~  199 (345)
T 2v62_A          175 GDIKAANLLLGYKNPDQVYLADYGL  199 (345)
T ss_dssp             SCCSGGGEEEESSSTTSEEECCCTT
T ss_pred             CCcCHHHEEEccCCCCcEEEEeCCC
Confidence            99999999999887  999999984

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.80  E-value=2.5e-21  Score=148.79  Aligned_cols=95  Identities=27%  Similarity=0.415  Sum_probs=84.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  ....++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        60 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  133 (283)
T 3bhy_A           60 NILREIRHPNIITLHDIFEN--KTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKRIAHFD  133 (283)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCeeehhheecC--CCeEEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence            34566789999999999876  4678999999999999999864    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccc----eeecccccC
Q psy18117        195 ERETFLSVLGDC----VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~----~~ki~D~~~  215 (215)
                      |||+||+++.++    .+||+|||.
T Consensus       134 l~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A          134 LKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             CSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CChHHEEEecCCCCCCceEEEeccc
Confidence            999999998877    899999973

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.80  E-value=4.3e-21  Score=149.09  Aligned_cols=95  Identities=24%  Similarity=0.311  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..  .+..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  131 (304)
T 2jam_A           58 AVLKKIKHENIVTLEDIYES--TTHYYLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRD  131 (304)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred             HHHHhCCCCCeeehhhhccc--CCEEEEEEEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            45567789999999999876  4678999999999999999865    23589999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeecccccC
Q psy18117        195 ERETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~~  215 (215)
                      |||+|||+   +.++.+||+|||.
T Consensus       132 ikp~NIl~~~~~~~~~~kl~Dfg~  155 (304)
T 2jam_A          132 LKPENLLYLTPEENSKIMITDFGL  155 (304)
T ss_dssp             CCGGGCEESSSSTTCCEEBCSCST
T ss_pred             CCHHHEEEecCCCCCCEEEccCCc
Confidence            99999999   7788999999983

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.80  E-value=2.3e-21  Score=152.42  Aligned_cols=95  Identities=24%  Similarity=0.255  Sum_probs=84.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  .+..++||||+++++|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        76 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~d  149 (331)
T 4aaa_A           76 KLLKQLRHENLVNLLEVCKK--KKRWYLVFEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD  149 (331)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHhhCCCCCEeeEEEEeec--CCEEEEEEecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccC
Confidence            45667789999999999875  5678999999999888877532    34599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       150 lkp~Nil~~~~~~~kl~Dfg~  170 (331)
T 4aaa_A          150 IKPENILVSQSGVVKLCDFGF  170 (331)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             cChheEEEcCCCcEEEEeCCC
Confidence            999999999999999999984

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.4e-21  Score=150.66  Aligned_cols=95  Identities=20%  Similarity=0.318  Sum_probs=84.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..   +..++||||+++|+|.+++..   .+..+++..++.++.|++.||.|||++||+|||
T Consensus        62 ~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  135 (287)
T 1u59_A           62 QIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD  135 (287)
T ss_dssp             HHHHHCCCTTBCCEEEEEES---SSEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeEEEEEecC---CCcEEEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence            44566789999999998843   468999999999999999853   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       136 lkp~Nili~~~~~~kl~Dfg~  156 (287)
T 1u59_A          136 LAARNVLLVNRHYAKISDFGL  156 (287)
T ss_dssp             CSGGGEEEEETTEEEECCCTT
T ss_pred             CchheEEEcCCCCEEECcccc
Confidence            999999999999999999983

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.79  E-value=4.4e-21  Score=148.05  Aligned_cols=97  Identities=26%  Similarity=0.347  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--c
Q psy18117        115 YSDKTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--I  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i  190 (215)
                      .+++.++||||+++++.+...  ....+++||||+++|+|.+++...    ..+++..++.++.|++.||.|||+++  |
T Consensus        77 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i  152 (290)
T 1t4h_A           77 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRTPPI  152 (290)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred             HHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcCCCCE
Confidence            455677899999999987542  134589999999999999999652    35899999999999999999999999  9


Q ss_pred             cccccchhhhhhh-ccceeecccccC
Q psy18117        191 LHRGERETFLSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~-~~~~~ki~D~~~  215 (215)
                      +||||||+|||++ .++.+||+|||.
T Consensus       153 ~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          153 IHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EECCCCHHHEEEECCCCCEEEeeCCC
Confidence            9999999999997 788999999973

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.79  E-value=3.1e-21  Score=149.40  Aligned_cols=95  Identities=28%  Similarity=0.406  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  ++..++||||+++ +|.+++...  ....+++..++.++.|+++||.|||++||+|||
T Consensus        54 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  128 (299)
T 2r3i_A           54 SLLKELNHPNIVKLLDVIHT--ENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  128 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHHcCCCCeeeEEEEEec--CCceEEEEEcccC-CHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence            44567789999999999876  4678999999995 999998653  224588999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+||+++.++.+||+|||
T Consensus       129 lkp~Nili~~~~~~kl~dfg  148 (299)
T 2r3i_A          129 LKPQNLLINTEGAIKLADFG  148 (299)
T ss_dssp             CCGGGEEECTTSCEEECSTT
T ss_pred             CCHHHeEEcCCCCEEECcch
Confidence            99999999999999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.79  E-value=1e-21  Score=155.61  Aligned_cols=97  Identities=20%  Similarity=0.336  Sum_probs=82.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+++.++||||+++++.+....      .+.+++||||+++ +|.+.+..   ....+++..++.++.|++.||.|||++
T Consensus        68 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~  143 (351)
T 3mi9_A           68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRN  143 (351)
T ss_dssp             HHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4556778999999999886532      2357899999997 88887743   234699999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       144 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A          144 KILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence            999999999999999999999999983

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.79  E-value=1.5e-21  Score=149.47  Aligned_cols=95  Identities=24%  Similarity=0.289  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  ++..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        57 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d  130 (276)
T 2yex_A           57 CINKMLNHENVVKFYGHRRE--GNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  130 (276)
T ss_dssp             HHHHTCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCceeeeeEEEc--CCEEEEEEEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence            34556789999999998875  5678999999999999998843    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       131 l~p~Nil~~~~~~~kl~dfg~  151 (276)
T 2yex_A          131 IKPENLLLDERDNLKISDFGL  151 (276)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CChHHEEEccCCCEEEeeCCC
Confidence            999999999999999999983

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.79  E-value=5.7e-21  Score=149.68  Aligned_cols=93  Identities=23%  Similarity=0.361  Sum_probs=82.7

Q ss_pred             CCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      +||||+++++.+....    ...+++||||+++|+|.+++...  ....+++..++.++.|++.||.|||++||+|||||
T Consensus        79 ~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk  156 (326)
T 2x7f_A           79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK  156 (326)
T ss_dssp             CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCS
T ss_pred             CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence            7999999999886532    34689999999999999999753  23468999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|||++.++.+||+|||.
T Consensus       157 p~NIl~~~~~~~kl~Dfg~  175 (326)
T 2x7f_A          157 GQNVLLTENAEVKLVDFGV  175 (326)
T ss_dssp             GGGEEECTTCCEEECCCTT
T ss_pred             HHHEEEcCCCCEEEeeCcC
Confidence            9999999999999999983

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.79  E-value=2.4e-21  Score=151.72  Aligned_cols=94  Identities=26%  Similarity=0.434  Sum_probs=82.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+..   +..++||||+++|+|.+++..    ...+++..++.++.|++.||.|||++||+|||
T Consensus        67 ~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d  139 (322)
T 2ycf_A           67 EILKKLNHPCIIKIKNFFDA---EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRD  139 (322)
T ss_dssp             HHHHHCCCTTBCCEEEEEES---SSEEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCceEeeEEcC---CceEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            45667789999999998865   347899999999999998843    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeecccccC
Q psy18117        195 ERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      |||+|||++.++   .+||+|||.
T Consensus       140 lkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A          140 LKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             CSGGGEEESSSSSSCCEEECCCTT
T ss_pred             CCHHHEEEecCCCCCeEEEccCcc
Confidence            999999998766   499999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.79  E-value=4.6e-21  Score=151.10  Aligned_cols=91  Identities=20%  Similarity=0.235  Sum_probs=81.8

Q ss_pred             CCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH--------hCC
Q psy18117        120 LHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH--------SRR  189 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH--------~~~  189 (215)
                      ++||||+++++.+.....  ..+++||||+++|+|.+++..     ..+++..++.++.|++.||.|||        ++|
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~  167 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA  167 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Confidence            789999999998876422  268899999999999999954     25899999999999999999999        899


Q ss_pred             ccccccchhhhhhhccceeecccccC
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+||||||+|||++.++.+||+|||.
T Consensus       168 ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          168 IAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             eeeCCCCHHHEEECCCCCEEEEECCC
Confidence            99999999999999999999999984

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.79  E-value=7.6e-21  Score=147.11  Aligned_cols=94  Identities=22%  Similarity=0.359  Sum_probs=84.1

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ++..+ .||||+++++.+..  ++..++||||+++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        76 ~l~~l~~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  149 (298)
T 1phk_A           76 ILRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRD  149 (298)
T ss_dssp             HHHHHTTCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhcCCCCEeeeeeeecc--CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence            34445 49999999999876  4678999999999999999965    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       150 l~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A          150 LKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CCcceEEEcCCCcEEEecccc
Confidence            999999999999999999983

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.79  E-value=5.2e-21  Score=146.12  Aligned_cols=94  Identities=26%  Similarity=0.409  Sum_probs=81.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC---cc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR---IL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~  191 (215)
                      .+...++||||+++++.+..  ++..++||||+++++|.+++.     +..+++..++.++.|+++||.|||++|   |+
T Consensus        58 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~  130 (271)
T 3dtc_A           58 KLFAMLKHPNIIALRGVCLK--EPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPII  130 (271)
T ss_dssp             HHHHHCCCTTBCCEEEEECC--C--CEEEEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCC
T ss_pred             HHHHhcCCCCEeeEEEEEec--CCceEEEEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCcee
Confidence            44567789999999999876  567899999999999999874     336999999999999999999999999   89


Q ss_pred             ccccchhhhhhhc--------cceeecccccC
Q psy18117        192 HRGERETFLSVLG--------DCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~--------~~~~ki~D~~~  215 (215)
                      ||||||+|||++.        ++.+||+|||.
T Consensus       131 H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~  162 (271)
T 3dtc_A          131 HRDLKSSNILILQKVENGDLSNKILKITDFGL  162 (271)
T ss_dssp             CSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred             ecCCchHHEEEecccccccccCcceEEccCCc
Confidence            9999999999986        67899999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.79  E-value=3.4e-21  Score=150.22  Aligned_cols=96  Identities=16%  Similarity=0.273  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++||||+++|+|.+++..   ....+++..++.++.|++.||.|||++||+|||
T Consensus        76 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d  150 (314)
T 3com_A           76 SIMQQCDSPHVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD  150 (314)
T ss_dssp             HHHHTCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCccEEEEEEe--CCEEEEEeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence            44567789999999998876  4678999999999999999864   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       151 l~p~Nil~~~~~~~kl~dfg~  171 (314)
T 3com_A          151 IKAGNILLNTEGHAKLADFGV  171 (314)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             cCHHHEEECCCCCEEEeeccc
Confidence            999999999999999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.79  E-value=1.2e-20  Score=145.25  Aligned_cols=94  Identities=22%  Similarity=0.304  Sum_probs=81.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--ccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--ILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i~H  192 (215)
                      .+...++||||+++++.+.+.    .++||||+++|+|.+++..   ....+++..++.++.|++.||.|||++|  |+|
T Consensus        75 ~~l~~l~h~~i~~~~~~~~~~----~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH  147 (287)
T 4f0f_A           75 FIMSNLNHPNIVKLYGLMHNP----PRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH  147 (287)
T ss_dssp             HHHTTCCCTTBCCEEEEETTT----TEEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred             HHHHhCCCCCchhhheeecCC----CeEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeec
Confidence            455677899999999988652    2689999999999988754   3346999999999999999999999999  999


Q ss_pred             cccchhhhhhhccce-----eecccccC
Q psy18117        193 RGERETFLSVLGDCV-----RTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~-----~ki~D~~~  215 (215)
                      |||||+|||++.++.     +||+|||.
T Consensus       148 ~dikp~Nil~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A          148 RDLRSPNIFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             SCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred             CCCCcceEEEeccCCCCceeEEeCCCCc
Confidence            999999999988775     99999973

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.79  E-value=3.8e-21  Score=150.89  Aligned_cols=98  Identities=22%  Similarity=0.261  Sum_probs=83.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH---hcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ---KKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++.+..  ....++||||+++|+|.+++.....   ....+++..++.++.|++.||.|||++||+
T Consensus        85 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~  162 (327)
T 2yfx_A           85 LIISKFNHQNIVRCIGVSLQ--SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI  162 (327)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHhhCCCCCCCeEEEEEcC--CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCee
Confidence            34566789999999999876  4578999999999999999975321   113488999999999999999999999999


Q ss_pred             ccccchhhhhhhcc---ceeeccccc
Q psy18117        192 HRGERETFLSVLGD---CVRTVSEQA  214 (215)
Q Consensus       192 HrDikp~Nil~~~~---~~~ki~D~~  214 (215)
                      ||||||+|||++.+   ..+||+|||
T Consensus       163 H~dlkp~NIli~~~~~~~~~kl~Dfg  188 (327)
T 2yfx_A          163 HRDIAARNCLLTCPGPGRVAKIGDFG  188 (327)
T ss_dssp             CSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             cCcCCHhHEEEecCCCcceEEECccc
Confidence            99999999999854   479999997

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.79  E-value=4.5e-21  Score=153.11  Aligned_cols=94  Identities=26%  Similarity=0.408  Sum_probs=81.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCch----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++.....    ..+++||||+++ +|.+.+..      .+++..+..++.|++.||.|||++||
T Consensus        76 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i  148 (371)
T 2xrw_A           76 VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGI  148 (371)
T ss_dssp             HHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            45567789999999998865321    257999999986 88887742      48999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       149 vH~Dlkp~NIl~~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          149 IHRDLKPSNIVVKSDCTLKILDFGL  173 (371)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ecccCCHHHEEEcCCCCEEEEEeec
Confidence            9999999999999999999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.78  E-value=4.8e-21  Score=151.36  Aligned_cols=92  Identities=17%  Similarity=0.251  Sum_probs=79.2

Q ss_pred             CCccCCC--cchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        116 SDKTLHH--PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       116 ~~~~l~h--~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ++..+.|  |||+++++.+..  ++.+++||| +.+|+|.+++..    +..+++..++.++.|++.||.|||++||+||
T Consensus        60 ~l~~l~~~~~~iv~~~~~~~~--~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHr  132 (343)
T 3dbq_A           60 YLNKLQQHSDKIIRLYDYEIT--DQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHS  132 (343)
T ss_dssp             HHHHHTTTCTTBCCEEEEEEC--SSEEEEEEC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHhhhhcCCceEEEeeeEee--CCEEEEEEe-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            3444544  899999999876  567899999 556799999964    3469999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++ ++.+||+|||.
T Consensus       133 Dikp~NIll~-~~~~kl~DFG~  153 (343)
T 3dbq_A          133 DLKPANFLIV-DGMLKLIDFGI  153 (343)
T ss_dssp             CCCGGGEEEE-TTEEEECCCSS
T ss_pred             CCCcceEEEE-CCcEEEeeccc
Confidence            9999999996 68899999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.78  E-value=7.5e-21  Score=149.92  Aligned_cols=97  Identities=22%  Similarity=0.280  Sum_probs=81.9

Q ss_pred             CccCCCcchhhhhhhhcCCc--hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+.|||++++++++....  ...+++||||+++|+|.+++....  ...+++..++.++.|++.||.|||++||+|||
T Consensus        76 ~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~d  153 (336)
T 3fhr_A           76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD  153 (336)
T ss_dssp             HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            34568999999999886421  234789999999999999996522  23699999999999999999999999999999


Q ss_pred             cchhhhhhhcc---ceeecccccC
Q psy18117        195 ERETFLSVLGD---CVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~---~~~ki~D~~~  215 (215)
                      |||+|||++.+   +.+||+|||.
T Consensus       154 lkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          154 VKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             CSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CCHHHEEEEecCCCceEEEecccc
Confidence            99999999764   4699999984

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.78  E-value=5.6e-21  Score=147.59  Aligned_cols=98  Identities=22%  Similarity=0.293  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++||||+++++|.+++.... ....+++..++.++.|++.||.|||++||+|||
T Consensus        71 ~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  147 (295)
T 2clq_A           71 ALHKHLKHKNIVQYLGSFSE--NGFIKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD  147 (295)
T ss_dssp             HHHHTCCCTTBCCEEEEEEE--TTEEEEEEECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeeEeeEEEe--CCcEEEEEEeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhCCEEccC
Confidence            44567789999999999875  467899999999999999986521 223567889999999999999999999999999


Q ss_pred             cchhhhhhhc-cceeecccccC
Q psy18117        195 ERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      |||+|||++. ++.+||+|||.
T Consensus       148 l~p~Nil~~~~~~~~kl~Dfg~  169 (295)
T 2clq_A          148 IKGDNVLINTYSGVLKISDFGT  169 (295)
T ss_dssp             CSGGGEEEETTTCCEEECCTTT
T ss_pred             CChhhEEEECCCCCEEEeeccc
Confidence            9999999987 88999999973

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.78  E-value=7.6e-21  Score=151.13  Aligned_cols=97  Identities=25%  Similarity=0.348  Sum_probs=83.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++....   ...+++||||+++ +|.+++..   .+..+++..++.++.|++.||.|||++||+
T Consensus        81 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  156 (362)
T 3pg1_A           81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEAGVV  156 (362)
T ss_dssp             HHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCcCE
Confidence            4566778999999999885422   2357899999995 89888753   344699999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       157 H~Dlkp~NIl~~~~~~~kl~Dfg~  180 (362)
T 3pg1_A          157 HRDLHPGNILLADNNDITICDFNL  180 (362)
T ss_dssp             CCCCCGGGEEECTTCCEEECCTTC
T ss_pred             ecCCChHHEEEcCCCCEEEEecCc
Confidence            999999999999999999999984

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.78  E-value=9.2e-21  Score=147.58  Aligned_cols=96  Identities=23%  Similarity=0.327  Sum_probs=81.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh---CCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS---RRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~  191 (215)
                      ..+..++||||+++++.+.+    ..++||||+++|+|.+++.... ....+++..+..++.|+++||.|||+   +||+
T Consensus        53 ~~l~~l~hp~iv~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~iv  127 (307)
T 2eva_A           53 RQLSRVNHPNIVKLYGACLN----PVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI  127 (307)
T ss_dssp             HHHHHCCCTTBCCEEEBCTT----TTEEEEECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCC
T ss_pred             HHHhcCCCCCcCeEEEEEcC----CcEEEEEcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCee
Confidence            44567789999999988753    4789999999999999986421 11246788999999999999999999   8999


Q ss_pred             ccccchhhhhhhccce-eecccccC
Q psy18117        192 HRGERETFLSVLGDCV-RTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~-~ki~D~~~  215 (215)
                      ||||||+|||++.++. +||+|||.
T Consensus       128 H~dlkp~NIll~~~~~~~kl~Dfg~  152 (307)
T 2eva_A          128 HRDLKPPNLLLVAGGTVLKICDFGT  152 (307)
T ss_dssp             CCCCSGGGEEEETTTTEEEECCCCC
T ss_pred             cCCCChhHEEEeCCCCEEEEccccc
Confidence            9999999999988885 89999984

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.78  E-value=3.7e-21  Score=151.11  Aligned_cols=91  Identities=18%  Similarity=0.271  Sum_probs=80.6

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      .||||+++++++..  .+..++||||+++|+|.+++..  .....+++..++.++.|++.||.|||++||+||||||+||
T Consensus        87 ~~~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NI  162 (327)
T 3lm5_A           87 SCPRVINLHEVYEN--TSEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNI  162 (327)
T ss_dssp             TCTTBCCEEEEEEC--SSEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             CCCCEEEEEEEEEe--CCeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHE
Confidence            57999999999876  4678999999999999998743  2234699999999999999999999999999999999999


Q ss_pred             hhhc---cceeecccccC
Q psy18117        201 SVLG---DCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~---~~~~ki~D~~~  215 (215)
                      |++.   ++.+||+|||.
T Consensus       163 l~~~~~~~~~~kL~Dfg~  180 (327)
T 3lm5_A          163 LLSSIYPLGDIKIVDFGM  180 (327)
T ss_dssp             EESCBTTBCCEEECCGGG
T ss_pred             EEecCCCCCcEEEeeCcc
Confidence            9988   78999999983

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.78  E-value=1e-20  Score=146.35  Aligned_cols=89  Identities=16%  Similarity=0.103  Sum_probs=78.4

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      +|++++.+++.+..  +...++||||+ +++|.+++...   ...+++..+..++.|++.||.|||++||+||||||+||
T Consensus        64 ~~~~i~~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NI  137 (298)
T 1csn_A           64 GCTGIPNVYYFGQE--GLHNVLVIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNF  137 (298)
T ss_dssp             TCTTCCCEEEEEEE--TTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGE
T ss_pred             cCCCCCeEEeecCC--CceeEEEEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence            68888888887764  56789999999 88999999653   23599999999999999999999999999999999999


Q ss_pred             hhhccce-----eecccccC
Q psy18117        201 SVLGDCV-----RTVSEQAK  215 (215)
Q Consensus       201 l~~~~~~-----~ki~D~~~  215 (215)
                      |++.++.     +||+|||.
T Consensus       138 l~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A          138 LIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             EECCSSSTTTTCEEECCCTT
T ss_pred             EeccCCCCCCCeEEEEECcc
Confidence            9987775     99999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.78  E-value=2.4e-21  Score=154.48  Aligned_cols=95  Identities=26%  Similarity=0.369  Sum_probs=76.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++....    ....++++|++. ++|.+++..     ..+++..++.++.||+.||.|||++||
T Consensus        80 ~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~gi  153 (367)
T 2fst_X           80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADI  153 (367)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCC-EECC----------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhCCCCCCCcEEEEEecCCccccCCeEEEEecccC-CCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4566778999999999886431    145789999994 699998853     359999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       154 vH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          154 IHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCCCCCGGGEEECTTCCEEECC---
T ss_pred             eeCCCCHhhEEECCCCCEEEeeccc
Confidence            9999999999999999999999984

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=4.5e-21  Score=152.71  Aligned_cols=95  Identities=21%  Similarity=0.368  Sum_probs=83.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCch---hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG---QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++.....   ...++||||+++ +|.+++..     ..+++..++.++.|++.||.|||++||+
T Consensus        77 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~iv  150 (364)
T 3qyz_A           77 KILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVL  150 (364)
T ss_dssp             HHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45667789999999998865321   357899999996 99998853     2599999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       151 H~Dikp~NIl~~~~~~~kl~Dfg~  174 (364)
T 3qyz_A          151 HRDLKPSNLLLNTTCDLKICDFGL  174 (364)
T ss_dssp             CCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cCCCChHhEEECCCCCEEEEeCcc
Confidence            999999999999999999999984

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.78  E-value=8.7e-21  Score=147.24  Aligned_cols=94  Identities=15%  Similarity=0.262  Sum_probs=84.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++.+..  ....++||||+++++|.+++..     ..+++..+..++.|++.||.|||++||+|||
T Consensus        72 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d  144 (303)
T 3a7i_A           72 TVLSQCDSPYVTKYYGSYLK--DTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEKKIHRD  144 (303)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeEEEEEEec--CCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence            34566789999999998876  4678999999999999998842     3689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||+++.++.+||+|||.
T Consensus       145 l~p~Nil~~~~~~~kl~Dfg~  165 (303)
T 3a7i_A          145 IKAANVLLSEHGEVKLADFGV  165 (303)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CChheEEECCCCCEEEeeccc
Confidence            999999999999999999983

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.78  E-value=1.9e-20  Score=150.43  Aligned_cols=92  Identities=17%  Similarity=0.246  Sum_probs=78.8

Q ss_pred             CCccCC--CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        116 SDKTLH--HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       116 ~~~~l~--h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      ++..+.  ||||+++++++..  .+.+++||| +.+|+|.+++..    +..+++..++.++.||+.||.|||++||+||
T Consensus       107 ~l~~l~~~~~~iv~~~~~~~~--~~~~~lv~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHr  179 (390)
T 2zmd_A          107 YLNKLQQHSDKIIRLYDYEIT--DQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHS  179 (390)
T ss_dssp             HHHHHTTTCTTBCCEEEEEEC--SSEEEEEEE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHHHcccCCCeEEEEEEEEec--CCEEEEEEe-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence            344444  6999999998876  456899999 566799999864    3468899999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++ ++.+||+|||.
T Consensus       180 Dlkp~NIll~-~~~~kl~DFG~  200 (390)
T 2zmd_A          180 DLKPANFLIV-DGMLKLIDFGI  200 (390)
T ss_dssp             CCCGGGEEES-SSCEEECCCSS
T ss_pred             CCCHHHEEEE-CCeEEEEecCc
Confidence            9999999995 68999999984

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=2e-20  Score=146.49  Aligned_cols=94  Identities=23%  Similarity=0.331  Sum_probs=81.2

Q ss_pred             cCCCcchhhhhhhhcC---CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        119 TLHHPNIVELRSAFAS---RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~---~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      .+.||||+++++++..   ......++||||+++ +|.+++....  ...+++..++.++.|++.||.|||++||+||||
T Consensus        70 ~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dl  146 (326)
T 1blx_A           70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL  146 (326)
T ss_dssp             HTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             ccCCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Confidence            3489999999998762   124578999999995 9999986522  235899999999999999999999999999999


Q ss_pred             chhhhhhhccceeecccccC
Q psy18117        196 RETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+|||++.++.+||+|||.
T Consensus       147 kp~Nili~~~~~~kl~Dfg~  166 (326)
T 1blx_A          147 KPQNILVTSSGQIKLADFGL  166 (326)
T ss_dssp             CGGGEEECTTCCEEECSCCS
T ss_pred             CHHHeEEcCCCCEEEecCcc
Confidence            99999999999999999983

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.78  E-value=2.1e-21  Score=153.46  Aligned_cols=97  Identities=9%  Similarity=0.244  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHH------HHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALV------IAECRQKKCHLAECLVWSYFRQIAAALQYVHS-  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~------i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-  187 (215)
                      .+...++||||+++++++..  .+..++||||+++|+|.++      +..  .....+++..++.++.|++.||.|||+ 
T Consensus        95 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~  170 (348)
T 2pml_X           95 QIITDIKNEYCLTCEGIITN--YDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNE  170 (348)
T ss_dssp             HHHTTCCCTTBCCCSEEEES--SSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCCCCcceEEEEEee--CCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            44566789999999999876  4678999999999999988      532  114569999999999999999999999 


Q ss_pred             CCccccccchhhhhhhccceeecccccC
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||+||||||+|||++.++.+||+|||.
T Consensus       171 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~  198 (348)
T 2pml_X          171 KNICHRDVKPSNILMDKNGRVKLSDFGE  198 (348)
T ss_dssp             SCEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             CCEeecCCChHhEEEcCCCcEEEecccc
Confidence            9999999999999999999999999983

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.78  E-value=5.9e-21  Score=163.45  Aligned_cols=94  Identities=16%  Similarity=0.206  Sum_probs=78.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh---HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ---ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++...+..   ..++||||+++++|.+++..      .+++..+..++.||+.||.|||++||+
T Consensus       131 ~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~gii  204 (681)
T 2pzi_A          131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSIGLV  204 (681)
T ss_dssp             GGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            556778999999999988753211   16899999999999987632      599999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.+ .+||+|||.
T Consensus       205 HrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          205 YNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             CCCCSGGGEEECSS-CEEECCCTT
T ss_pred             ecccChHHeEEeCC-cEEEEeccc
Confidence            99999999999875 899999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.77  E-value=2.1e-20  Score=151.96  Aligned_cols=92  Identities=17%  Similarity=0.197  Sum_probs=81.0

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      ...|+||+++++.+..  .+.+++||||+.+ +|.+++...  ....+++..++.++.||+.||.|||++||+||||||+
T Consensus       155 ~~~~~~iv~~~~~~~~--~~~~~lv~e~~~~-~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~  229 (429)
T 3kvw_A          155 KDNTMNVIHMLENFTF--RNHICMTFELLSM-NLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE  229 (429)
T ss_dssp             TTSCSCBCCEEEEEEE--TTEEEEEECCCCC-BHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGG
T ss_pred             ccCCcCEEEEEeeccc--CCeEEEEEeccCC-CHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence            4578999999998876  4678999999975 999998653  2335899999999999999999999999999999999


Q ss_pred             hhhhhccce--eecccccC
Q psy18117        199 FLSVLGDCV--RTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~--~ki~D~~~  215 (215)
                      |||++.++.  +||+|||.
T Consensus       230 NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          230 NILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             GEEESSTTSCCEEECCCTT
T ss_pred             HeEEccCCCcceEEeeccc
Confidence            999999986  99999984

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.77  E-value=3.1e-20  Score=147.42  Aligned_cols=97  Identities=23%  Similarity=0.294  Sum_probs=82.0

Q ss_pred             ccCCCcchhhhhhhhcCCch-----hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH--hCCc
Q psy18117        118 KTLHHPNIVELRSAFASRSG-----QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH--SRRI  190 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~-----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH--~~~i  190 (215)
                      ..++||||+++++++.....     ..+++||||+++ +|...+.........+++..++.++.|++.||.|||  ++||
T Consensus        74 ~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~i  152 (360)
T 3e3p_A           74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV  152 (360)
T ss_dssp             HHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCC
T ss_pred             HhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence            45689999999998854221     127899999997 777776655555667999999999999999999999  9999


Q ss_pred             cccccchhhhhhhc-cceeecccccC
Q psy18117        191 LHRGERETFLSVLG-DCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~-~~~~ki~D~~~  215 (215)
                      +||||||+|||++. ++.+||+|||.
T Consensus       153 vH~Dlkp~NIll~~~~~~~kl~Dfg~  178 (360)
T 3e3p_A          153 CHRDIKPHNVLVNEADGTLKLCDFGS  178 (360)
T ss_dssp             BCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             ecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence            99999999999997 89999999984

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.77  E-value=3.8e-20  Score=145.36  Aligned_cols=98  Identities=26%  Similarity=0.303  Sum_probs=82.2

Q ss_pred             CCccC-CCcchhhhhhhhcC------CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        116 SDKTL-HHPNIVELRSAFAS------RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~------~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+..+ +||||+++++.+..      ......+++|||+.+ +|.+++.... .+..+++..++.++.|++.||.|||++
T Consensus        78 ~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~  155 (337)
T 3ll6_A           78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ  155 (337)
T ss_dssp             HHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhccCCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34445 49999999887731      123457899999984 9999987643 345699999999999999999999999


Q ss_pred             C--ccccccchhhhhhhccceeecccccC
Q psy18117        189 R--ILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~--i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |  |+||||||+|||++.++.+||+|||.
T Consensus       156 ~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          156 KPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             SSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             CCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            9  99999999999999999999999984

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.77  E-value=4e-20  Score=145.00  Aligned_cols=97  Identities=12%  Similarity=0.123  Sum_probs=84.8

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-hcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-KKCHLAECLVWSYFRQIAAALQYVHSR-RILHR  193 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~Hr  193 (215)
                      ..+.++||||+++++.+..  ++..++||||+++ +|.+++..... ....+++..+..++.|++.||.|||++ ||+||
T Consensus        74 ~~~~~~h~niv~~~~~~~~--~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~  150 (327)
T 3aln_A           74 VMRSSDCPYIVQFYGALFR--EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHR  150 (327)
T ss_dssp             HHSSCCCTTBCCEEEEEEC--SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCS
T ss_pred             HHHcCCCCcEeeeeeEEEe--CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeEC
Confidence            3456789999999999876  4678999999997 89888765332 245789999999999999999999999 99999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       151 dlkp~NIll~~~~~~kl~Dfg~  172 (327)
T 3aln_A          151 DIKPSNILLDRSGNIKLCDFGI  172 (327)
T ss_dssp             CCCGGGEEEETTTEEEECCCSS
T ss_pred             CCCHHHEEEcCCCCEEEccCCC
Confidence            9999999999999999999984

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.76  E-value=1.7e-20  Score=149.80  Aligned_cols=94  Identities=23%  Similarity=0.401  Sum_probs=81.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh----HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ----ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++...+..    ..++||||+.+ +|.+++.      ..+++..++.++.|++.||.|||++||
T Consensus        93 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~i  165 (371)
T 4exu_A           93 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSAGV  165 (371)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            456677899999999998763221    23899999995 8887762      249999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       166 vH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          166 VHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             cCCCcCHHHeEECCCCCEEEEecCc
Confidence            9999999999999999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.76  E-value=1.5e-20  Score=153.10  Aligned_cols=93  Identities=23%  Similarity=0.276  Sum_probs=73.7

Q ss_pred             CCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcC---CchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        120 LHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKC---HLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       120 l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      .+||||+++++.+..  ++.+++|||||++ +|.+++........   ..++..++.++.|++.||.|||++||+|||||
T Consensus        66 ~~HpnIv~~~~~~~~--~~~~~lv~E~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLk  142 (434)
T 2rio_A           66 DDHPNVIRYYCSETT--DRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK  142 (434)
T ss_dssp             TTSTTBCCEEEEEEC--SSEEEEEECCCSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             cCCCCcCeEEEEEec--CCeEEEEEecCCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCC
Confidence            489999999988865  4678999999975 99999865321111   12344567899999999999999999999999


Q ss_pred             hhhhhhhccc-------------eeecccccC
Q psy18117        197 ETFLSVLGDC-------------VRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~-------------~~ki~D~~~  215 (215)
                      |+|||++.++             .+||+|||.
T Consensus       143 p~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~  174 (434)
T 2rio_A          143 PQNILVSTSSRFTADQQTGAENLRILISDFGL  174 (434)
T ss_dssp             GGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred             hHhEEEecCcccccccccCCCceEEEEccccc
Confidence            9999997654             899999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.76  E-value=3.4e-20  Score=144.44  Aligned_cols=89  Identities=28%  Similarity=0.374  Sum_probs=77.7

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhh-hcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLEL-ADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~-~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      +||||+++++++..  .+..++|||+ +.+++|.+++..    +..+++..++.++.|++.||.|||++||+||||||+|
T Consensus        96 ~h~~i~~~~~~~~~--~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  169 (312)
T 2iwi_A           96 GHPGVIRLLDWFET--QEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDEN  169 (312)
T ss_dssp             CCSSBCCEEEEC-------CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGG
T ss_pred             CCCCeeeEEEEEec--CCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhh
Confidence            89999999998876  4678899999 788999999965    2359999999999999999999999999999999999


Q ss_pred             hhhh-ccceeecccccC
Q psy18117        200 LSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~-~~~~~ki~D~~~  215 (215)
                      |+++ .++.+||+|||.
T Consensus       170 il~~~~~~~~kl~dfg~  186 (312)
T 2iwi_A          170 ILIDLRRGCAKLIDFGS  186 (312)
T ss_dssp             EEEETTTTEEEECCCSS
T ss_pred             EEEeCCCCeEEEEEcch
Confidence            9999 789999999983

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.76  E-value=1.8e-20  Score=148.38  Aligned_cols=95  Identities=22%  Similarity=0.308  Sum_probs=82.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .++..++||||+++++++....   ....++||||+.+ +|.+++..     ..+++..+..++.|++.||.|||++||+
T Consensus        61 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~iv  134 (353)
T 2b9h_A           61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGSNVI  134 (353)
T ss_dssp             HHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCc-cHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4556778999999998765421   2467899999985 99998854     2599999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.++.+||+|||.
T Consensus       135 H~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A          135 HRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             CSCCCGGGEEECTTCCEEECCCTT
T ss_pred             cCCCCHHHeEEcCCCcEEEEeccc
Confidence            999999999999999999999984

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.76  E-value=3.1e-20  Score=144.82  Aligned_cols=95  Identities=25%  Similarity=0.343  Sum_probs=80.3

Q ss_pred             cCCccCCCcchhhhhhhhcCC------------chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASR------------SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAAL  182 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~------------~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l  182 (215)
                      .+.+.++|||++++++++...            .....++||||+++ +|.+++..     ..+++..++.++.|+++||
T Consensus        60 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-----~~~~~~~~~~~~~qi~~~l  133 (320)
T 2i6l_A           60 KIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ-----GPLLEEHARLFMYQLLRGL  133 (320)
T ss_dssp             HHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHHTT-----CCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHhhc-----CCccHHHHHHHHHHHHHHH
Confidence            455677899999998876431            13467899999985 99998842     3589999999999999999


Q ss_pred             HHHHhCCccccccchhhhhhh-ccceeecccccC
Q psy18117        183 QYVHSRRILHRGERETFLSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       183 ~~lH~~~i~HrDikp~Nil~~-~~~~~ki~D~~~  215 (215)
                      .|||++||+||||||+|||++ .++.+||+|||.
T Consensus       134 ~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A          134 KYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             HHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             HHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence            999999999999999999997 567999999983

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.76  E-value=2.4e-20  Score=144.05  Aligned_cols=96  Identities=15%  Similarity=0.148  Sum_probs=79.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...+.|++++..+..+.. .+...++||||+ +|+|.+++...   ...+++..++.++.|++.||.|||++||+|||
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D  130 (296)
T 4hgt_A           56 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  130 (296)
T ss_dssp             HHHHHHTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHhcCCCCCCeeeeecC-CCCceEEEEEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence            34455667776666655543 245678999999 88999998642   33599999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeecccccC
Q psy18117        195 ERETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~~  215 (215)
                      |||+|||+   +.++.+||+|||.
T Consensus       131 lkp~NIl~~~~~~~~~~kL~Dfg~  154 (296)
T 4hgt_A          131 VKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             CSGGGEEECCGGGTTCEEECCCTT
T ss_pred             CCHHHeeeeccCCCCeEEEecCcc
Confidence            99999999   7889999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.76  E-value=5.5e-20  Score=141.72  Aligned_cols=94  Identities=21%  Similarity=0.275  Sum_probs=82.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++.+..  .+..++||||+++++|.+++...    ..+++..++.++.|++.||.|||++||+|||
T Consensus        73 ~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d  146 (287)
T 2wei_A           73 ELLKKLDHPNIMKLFEILED--SSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHNIVHRD  146 (287)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhccCCCccEEEEEEeC--CCeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            44566789999999999876  46789999999999999988642    3589999999999999999999999999999


Q ss_pred             cchhhhhhhccc---eeeccccc
Q psy18117        195 ERETFLSVLGDC---VRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~---~~ki~D~~  214 (215)
                      |||+||+++.++   .+||+|||
T Consensus       147 l~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A          147 LKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             CCGGGEEESCSSTTCCEEECSTT
T ss_pred             CChhhEEEecCCCcccEEEeccC
Confidence            999999997644   79999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.76  E-value=5.6e-20  Score=143.93  Aligned_cols=89  Identities=22%  Similarity=0.306  Sum_probs=80.0

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcC-CChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQ-GDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETF  199 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~N  199 (215)
                      .|+|++++++.+..  .+..++|||++.+ ++|.+++..    +..+++..++.++.|+++||.|||++||+||||||+|
T Consensus       106 ~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N  179 (320)
T 3a99_A          106 GFSGVIRLLDWFER--PDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN  179 (320)
T ss_dssp             SSCSBCCEEEEEEC--SSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCCceEEEEEEec--CCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHH
Confidence            46999999999876  4678999999986 899999865    3468999999999999999999999999999999999


Q ss_pred             hhhh-ccceeecccccC
Q psy18117        200 LSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       200 il~~-~~~~~ki~D~~~  215 (215)
                      ||++ .++.+||+|||.
T Consensus       180 Ill~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          180 ILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             EEEETTTTEEEECCCTT
T ss_pred             EEEeCCCCCEEEeeCcc
Confidence            9999 778999999983

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.75  E-value=6.5e-20  Score=147.18  Aligned_cols=83  Identities=20%  Similarity=0.288  Sum_probs=69.4

Q ss_pred             CCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Cccccccch
Q psy18117        121 HHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRGERE  197 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrDikp  197 (215)
                      .|+||+++++.+...  +...+++||||+. |+|.+.+..  .....+++..++.++.||+.||.|||++ ||+||||||
T Consensus        99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp  175 (397)
T 1wak_A           99 NREMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIK--SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP  175 (397)
T ss_dssp             GGGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHH--TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSG
T ss_pred             CcceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHh--cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence            488999999988621  2457899999995 478777754  2234699999999999999999999998 999999999


Q ss_pred             hhhhhhccc
Q psy18117        198 TFLSVLGDC  206 (215)
Q Consensus       198 ~Nil~~~~~  206 (215)
                      +|||++.++
T Consensus       176 ~NIll~~~~  184 (397)
T 1wak_A          176 ENILLSVNE  184 (397)
T ss_dssp             GGEEECCCH
T ss_pred             HHeeEeccc
Confidence            999998776

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.75  E-value=9.1e-20  Score=143.21  Aligned_cols=90  Identities=14%  Similarity=0.099  Sum_probs=77.4

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFL  200 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Ni  200 (215)
                      .|++++++++.+..  .+..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||++||+||||||+||
T Consensus        75 ~~~~i~~~~~~~~~--~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  149 (339)
T 1z57_A           75 STFRCVQMLEWFEH--HGHICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENI  149 (339)
T ss_dssp             CTTCBCCEEEEEEE--TTEEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             CceeeEeeeccccc--CCcEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHE
Confidence            35568888888865  46889999999 67999998652  223688999999999999999999999999999999999


Q ss_pred             hhhc-------------------cceeecccccC
Q psy18117        201 SVLG-------------------DCVRTVSEQAK  215 (215)
Q Consensus       201 l~~~-------------------~~~~ki~D~~~  215 (215)
                      |++.                   ++.+||+|||.
T Consensus       150 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  183 (339)
T 1z57_A          150 LFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS  183 (339)
T ss_dssp             EESCCCEEEEEC----CEEEEESCCCEEECCCSS
T ss_pred             EEeccccccccCCccccccccccCCCceEeeCcc
Confidence            9987                   56799999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.75  E-value=2.4e-20  Score=147.88  Aligned_cols=94  Identities=23%  Similarity=0.400  Sum_probs=81.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchh----HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQ----ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||+++++++......    ..++||||+.+ +|.+++.      ..+++..++.++.|++.||.|||++||
T Consensus        75 ~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~i  147 (353)
T 3coi_A           75 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSAGV  147 (353)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            455677899999999998763221    34899999995 9988763      248999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       148 vH~dlkp~NIl~~~~~~~kl~Dfg~  172 (353)
T 3coi_A          148 VHRDLKPGNLAVNEDCELKILDFGL  172 (353)
T ss_dssp             CCSSCCGGGEEECTTCCEEECSTTC
T ss_pred             ccCCCCHHHEeECCCCcEEEeeccc
Confidence            9999999999999999999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.75  E-value=7.8e-21  Score=158.42  Aligned_cols=85  Identities=7%  Similarity=-0.077  Sum_probs=72.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+.+...+..  .+..++||||+++|+|.+++..            +..++.|+++||.|||++||+|||
T Consensus       391 ~il~~l~h~nIv~~~~~~~~--~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~gIiHrD  456 (540)
T 3en9_A          391 RYLALVKDFGIPAPYIFDVD--LDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKNDVIHND  456 (540)
T ss_dssp             HHHHHGGGGTCCCCCEEEEE--TTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTTEECTT
T ss_pred             HHHHhcCCCCcCceEEEEEe--CCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCcCccCC
Confidence            56677899999944333333  4567999999999999998742            568999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.  .+||+|||.
T Consensus       457 iKp~NILl~~--~~kL~DFGl  475 (540)
T 3en9_A          457 LTTSNFIFDK--DLYIIDFGL  475 (540)
T ss_dssp             CCTTSEEESS--SEEECCCTT
T ss_pred             CCHHHEEECC--eEEEEECcc
Confidence            9999999998  999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.74  E-value=5.7e-20  Score=141.97  Aligned_cols=96  Identities=15%  Similarity=0.148  Sum_probs=78.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...+.|++++..+..+.. .+...++||||+ +++|.+++...   +..+++..++.++.|++.||.|||++||+|||
T Consensus        56 ~~l~~l~~~~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  130 (296)
T 3uzp_A           56 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  130 (296)
T ss_dssp             HHHHHHTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHhhcCCCCCccccccC-CCCceEEEEEec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence            34455667666655554433 245678999999 78999998642   33699999999999999999999999999999


Q ss_pred             cchhhhhh---hccceeecccccC
Q psy18117        195 ERETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~---~~~~~~ki~D~~~  215 (215)
                      |||+|||+   +.++.+||+|||.
T Consensus       131 lkp~NIl~~~~~~~~~~kl~Dfg~  154 (296)
T 3uzp_A          131 VKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             CCGGGEEECCGGGTTCEEECCCTT
T ss_pred             CCHHHeEEecCCCCCeEEEeeCCC
Confidence            99999999   5788999999984

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=5.9e-20  Score=149.41  Aligned_cols=94  Identities=17%  Similarity=0.185  Sum_probs=77.6

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+ +||||+++++.+.+  ....++|||||.+ +|.+++..   .....++..+..++.|++.||.|||++||+||
T Consensus        69 ~~l~~l~~HpnIv~l~~~~~~--~~~~~lv~E~~~g-~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr  142 (432)
T 3p23_A           69 QLLRESDEHPNVIRYFCTEKD--RQFQYIAIELCAA-TLQEYVEQ---KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHR  142 (432)
T ss_dssp             HHHHHSCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHS---SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHhccCCCCcCeEEEEEec--CCEEEEEEECCCC-CHHHHHHh---cCCCccchhHHHHHHHHHHHHHHHHHCcCEeC
Confidence            334445 79999999998865  5678999999986 99999854   23346667788999999999999999999999


Q ss_pred             ccchhhhhhhc---cc--eeeccccc
Q psy18117        194 GERETFLSVLG---DC--VRTVSEQA  214 (215)
Q Consensus       194 Dikp~Nil~~~---~~--~~ki~D~~  214 (215)
                      ||||+|||++.   ++  .+||+|||
T Consensus       143 DlKp~NIll~~~~~~~~~~~kL~DFG  168 (432)
T 3p23_A          143 DLKPHNILISMPNAHGKIKAMISDFG  168 (432)
T ss_dssp             CCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred             CCCHHHEEEecCCCCCceeEEEeccc
Confidence            99999999953   23  67899998

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.73  E-value=1.1e-19  Score=149.54  Aligned_cols=95  Identities=18%  Similarity=0.164  Sum_probs=75.5

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +...+.|++.+..+..+.. ..+..++||||+ +++|.+++...   ...+++..++.++.||+.||.|||++||+||||
T Consensus        55 il~~L~~~~~i~~i~~~~~-~~~~~~lvme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDI  129 (483)
T 3sv0_A           55 IYRILQGGTGIPNVRWFGV-EGDYNVLVMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDI  129 (483)
T ss_dssp             HHHHTTTSTTCCCEEEEEE-ETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHhcCCCCCCeEEEEEe-eCCEEEEEEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccc
Confidence            3344555444433333332 245678999999 78999999643   235999999999999999999999999999999


Q ss_pred             chhhhhh---hccceeecccccC
Q psy18117        196 RETFLSV---LGDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~---~~~~~~ki~D~~~  215 (215)
                      ||+|||+   +.++.+||+|||.
T Consensus       130 KP~NILl~~~~~~~~vkL~DFGl  152 (483)
T 3sv0_A          130 KPDNFLMGLGRRANQVYIIDFGL  152 (483)
T ss_dssp             CGGGEEECCGGGTTCEEECCCTT
T ss_pred             CcceEEEecCCCCCeEEEEeCCc
Confidence            9999999   6888999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.73  E-value=2.5e-19  Score=139.71  Aligned_cols=94  Identities=16%  Similarity=0.205  Sum_probs=79.3

Q ss_pred             CCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Cccccc
Q psy18117        116 SDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRG  194 (215)
Q Consensus       116 ~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrD  194 (215)
                      ....++||||+++++.+..  ++..++||||+ ++.+..+...   ....+++..++.++.|++.||.|||++ ||+|||
T Consensus        77 ~~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~d  150 (318)
T 2dyl_A           77 VLKSHDCPYIVQCFGTFIT--NTDVFIAMELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRD  150 (318)
T ss_dssp             HHHTTTCTTBCCEEEEEEC--SSEEEEEECCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred             HHHhcCCCceeeEEEEEec--CCcEEEEEecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCC
Confidence            3456789999999999876  46789999999 3355444432   244699999999999999999999995 999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       151 lkp~Nil~~~~~~~kl~dfg~  171 (318)
T 2dyl_A          151 VKPSNILLDERGQIKLCDFGI  171 (318)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHEEECCCCCEEEEECCC
Confidence            999999999999999999983

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.73  E-value=1e-19  Score=153.80  Aligned_cols=100  Identities=24%  Similarity=0.400  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcC----CchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFAS----RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~----~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .++..++||||+++++++..    ..++..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||++||
T Consensus        64 ~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~gI  142 (676)
T 3qa8_A           64 QIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENRI  142 (676)
T ss_dssp             HHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHTTB
T ss_pred             HHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            45667789999999887654    12456799999999999999986422 12358999999999999999999999999


Q ss_pred             cccccchhhhhhhccc---eeecccccC
Q psy18117        191 LHRGERETFLSVLGDC---VRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~---~~ki~D~~~  215 (215)
                      +||||||+|||++.++   .+||+|||.
T Consensus       143 VHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A          143 IHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             ccCCCCHHHeEeecCCCceeEEEccccc
Confidence            9999999999999776   499999984

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.72  E-value=5.9e-19  Score=137.55  Aligned_cols=86  Identities=17%  Similarity=0.262  Sum_probs=76.0

Q ss_pred             CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhh
Q psy18117        122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLS  201 (215)
Q Consensus       122 h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil  201 (215)
                      |+|++++++.+..  ++..+++|| +.+++|.+++..    +..+++..++.++.|+++||.|||++||+||||||+|||
T Consensus        87 ~~~iv~~~~~~~~--~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl  159 (313)
T 3cek_A           87 SDKIIRLYDYEIT--DQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFL  159 (313)
T ss_dssp             CTTBCCEEEEEEC--SSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCceEEEEEEeec--CCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEE
Confidence            5999999998876  457899999 566799999864    346899999999999999999999999999999999999


Q ss_pred             hhccceeecccccC
Q psy18117        202 VLGDCVRTVSEQAK  215 (215)
Q Consensus       202 ~~~~~~~ki~D~~~  215 (215)
                      ++ ++.+||+|||.
T Consensus       160 ~~-~~~~kL~Dfg~  172 (313)
T 3cek_A          160 IV-DGMLKLIDFGI  172 (313)
T ss_dssp             EE-TTEEEECCCSS
T ss_pred             EE-CCeEEEeeccc
Confidence            95 58999999973

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.71  E-value=3.8e-19  Score=141.67  Aligned_cols=94  Identities=17%  Similarity=0.276  Sum_probs=78.6

Q ss_pred             cCCCcchhhhhhhhcCCc--hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC-Ccccccc
Q psy18117        119 TLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR-RILHRGE  195 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~HrDi  195 (215)
                      .+.||||+++++.+....  ...++++|||+ +++|.+++....  ...+++..++.++.||+.||.|||++ ||+||||
T Consensus        82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Di  158 (373)
T 1q8y_A           82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDI  158 (373)
T ss_dssp             HHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCC
T ss_pred             ccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCC
Confidence            445899999999886522  23688999999 779999987532  34589999999999999999999998 9999999


Q ss_pred             chhhhhhh------ccceeecccccC
Q psy18117        196 RETFLSVL------GDCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~------~~~~~ki~D~~~  215 (215)
                      ||+|||++      ..+.+||+|||.
T Consensus       159 kp~NIll~~~~~~~~~~~~kl~Dfg~  184 (373)
T 1q8y_A          159 KPENVLMEIVDSPENLIQIKIADLGN  184 (373)
T ss_dssp             SGGGEEEEEEETTTTEEEEEECCCTT
T ss_pred             ChHHeEEeccCCCcCcceEEEccccc
Confidence            99999995      444899999984

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.71  E-value=8.3e-19  Score=138.64  Aligned_cols=89  Identities=13%  Similarity=0.114  Sum_probs=74.1

Q ss_pred             CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhh
Q psy18117        122 HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLS  201 (215)
Q Consensus       122 h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil  201 (215)
                      +.+++.+.+.+..  .+..++||||+. ++|.+++..  .....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 ~~~~~~~~~~~~~--~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIl  155 (355)
T 2eu9_A           81 KFLCVLMSDWFNF--HGHMCIAFELLG-KNTFEFLKE--NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENIL  155 (355)
T ss_dssp             CSCBCCEEEEEEE--TTEEEEEEECCC-CBHHHHHHH--TTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEE
T ss_pred             ceeEEEeeeeeee--CCeEEEEEeccC-CChHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence            3447777777765  467899999995 588887755  22346899999999999999999999999999999999999


Q ss_pred             h-------------------hccceeecccccC
Q psy18117        202 V-------------------LGDCVRTVSEQAK  215 (215)
Q Consensus       202 ~-------------------~~~~~~ki~D~~~  215 (215)
                      +                   +.++.+||+|||.
T Consensus       156 l~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~  188 (355)
T 2eu9_A          156 FVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS  188 (355)
T ss_dssp             ESCCCEEEEECCC-CCCEEEESCCCEEECCCTT
T ss_pred             EecccccccccccccccccccCCCcEEEeecCc
Confidence            9                   5678999999984

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.71  E-value=7.2e-19  Score=140.84  Aligned_cols=90  Identities=17%  Similarity=0.202  Sum_probs=76.3

Q ss_pred             CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH--hCCccccccchh
Q psy18117        121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH--SRRILHRGERET  198 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH--~~~i~HrDikp~  198 (215)
                      .|++++.+.+.+..  .+..++||||+++ +|.+++...  ....+++..++.++.|++.||.|||  ++||+||||||+
T Consensus       114 ~~~~iv~~~~~~~~--~~~~~lv~e~~~~-~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~  188 (382)
T 2vx3_A          114 MKYYIVHLKRHFMF--RNHLCLVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPE  188 (382)
T ss_dssp             GGGGBCCEEEEEEE--TTEEEEEEECCCC-BHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGG
T ss_pred             cceeEEEeeeeecc--CCceEEEEecCCC-CHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcc
Confidence            35568888888765  4678999999976 999998653  2235899999999999999999999  579999999999


Q ss_pred             hhhhh--ccceeecccccC
Q psy18117        199 FLSVL--GDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~--~~~~~ki~D~~~  215 (215)
                      |||++  .++.+||+|||.
T Consensus       189 NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          189 NILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             GEEESSTTSCCEEECCCTT
T ss_pred             cEEEecCCCCcEEEEeccC
Confidence            99994  477899999984

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.69  E-value=2.7e-19  Score=137.72  Aligned_cols=75  Identities=13%  Similarity=0.053  Sum_probs=62.3

Q ss_pred             hhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhcc
Q psy18117        126 VELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGD  205 (215)
Q Consensus       126 v~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~  205 (215)
                      +.+.+.+.   .+..++||||+++|+|.+ +.          ......++.|++.||.|||++||+||||||+|||++ +
T Consensus       164 ~~v~~~~~---~~~~~lvmE~~~g~~L~~-l~----------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~  228 (282)
T 1zar_A          164 LAVPKVYA---WEGNAVLMELIDAKELYR-VR----------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-E  228 (282)
T ss_dssp             SSSCCEEE---EETTEEEEECCCCEEGGG-CC----------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-T
T ss_pred             CCcCeEEe---ccceEEEEEecCCCcHHH-cc----------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-C
Confidence            44444443   356799999999999987 41          233457999999999999999999999999999999 9


Q ss_pred             ceeecccccC
Q psy18117        206 CVRTVSEQAK  215 (215)
Q Consensus       206 ~~~ki~D~~~  215 (215)
                      +.+||+|||.
T Consensus       229 ~~vkl~DFG~  238 (282)
T 1zar_A          229 EGIWIIDFPQ  238 (282)
T ss_dssp             TEEEECCCTT
T ss_pred             CcEEEEECCC
Confidence            9999999984

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.66  E-value=9.2e-18  Score=135.81  Aligned_cols=74  Identities=11%  Similarity=-0.002  Sum_probs=61.6

Q ss_pred             HHHHhhhcCCChHHHHHHHH---HhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        141 FLVLELADQGDLALVIAECR---QKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       141 ~lv~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +++|+++. ++|.++++...   ..+..+++..+..++.|+++||.|||++||+||||||+|||++.++.+||+|||.
T Consensus       181 ~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~  257 (413)
T 3dzo_A          181 FFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEH  257 (413)
T ss_dssp             EEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGG
T ss_pred             EEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccc
Confidence            34455544 59999986542   2233588889999999999999999999999999999999999999999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.55  E-value=2.7e-16  Score=119.48  Aligned_cols=68  Identities=13%  Similarity=0.145  Sum_probs=56.6

Q ss_pred             HHHHHHhhhcC-C----ChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH-hCCccccccchhhhhhhccceeeccc
Q psy18117        139 ELFLVLELADQ-G----DLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVH-SRRILHRGERETFLSVLGDCVRTVSE  212 (215)
Q Consensus       139 ~~~lv~e~~~~-g----~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH-~~~i~HrDikp~Nil~~~~~~~ki~D  212 (215)
                      ..++||||+.+ |    +|.+...       ..++..+..++.|++.|+.||| ++||+||||||+|||++.  .+||+|
T Consensus       142 ~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liD  212 (258)
T 1zth_A          142 KNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFID  212 (258)
T ss_dssp             TTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECC
T ss_pred             CCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEE
Confidence            56799999953 4    5554431       1446788999999999999999 999999999999999988  999999


Q ss_pred             ccC
Q psy18117        213 QAK  215 (215)
Q Consensus       213 ~~~  215 (215)
                      ||.
T Consensus       213 FG~  215 (258)
T 1zth_A          213 MGQ  215 (258)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            984

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.48  E-value=6.1e-16  Score=122.90  Aligned_cols=84  Identities=11%  Similarity=0.019  Sum_probs=64.7

Q ss_pred             CCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        121 HHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       121 ~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      .|+|+.++++......    ..+.++||||+++++|.++.          ....+..++.|++.++.+||++||||||||
T Consensus       163 E~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~----------~~~~~~~l~~qll~~l~~lH~~gIVHrDLK  232 (397)
T 4gyi_A          163 EFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVS----------SVPDPASLYADLIALILRLAKHGLIHGDFN  232 (397)
T ss_dssp             HHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCC----------CCSCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             HHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhc----------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            4677777766543211    12346999999998886542          233456789999999999999999999999


Q ss_pred             hhhhhhhccc----------eeeccccc
Q psy18117        197 ETFLSVLGDC----------VRTVSEQA  214 (215)
Q Consensus       197 p~Nil~~~~~----------~~ki~D~~  214 (215)
                      |.|||++.+|          .+.|+|++
T Consensus       233 p~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          233 EFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             TTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             HHHEEEeCCCCcccccccccceEEEEeC
Confidence            9999999887          48899986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.43  E-value=1.6e-13  Score=107.91  Aligned_cols=105  Identities=26%  Similarity=0.413  Sum_probs=67.1

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQS   85 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~   85 (215)
                      ..+.+++||+.|||||++.+..|+.++|+||+||.++|+  +.|.++|......               -++..+..+..
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem--l~G~~PF~~~~~~---------------~~~~~i~~~~~  287 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM--VDGEPPYFNEPPL---------------KAMKMIRDNLP  287 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH--HHSSCTTTTSCHH---------------HHHHHHHHSSC
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH--HHCCCCCCCcCHH---------------HHHHHHHcCCC
Confidence            445788999999999999888899999999999999999  4577776421110               01111122222


Q ss_pred             CccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         86 PFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        86 p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      |...........++.+....+...|..++.+.+.++||++.+
T Consensus       288 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~  329 (346)
T 4fih_A          288 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  329 (346)
T ss_dssp             CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence            211111112223344445556677888888889999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.39  E-value=3.8e-13  Score=108.30  Aligned_cols=105  Identities=26%  Similarity=0.413  Sum_probs=66.5

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQS   85 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~   85 (215)
                      ....+++||++|||||++.+..|+.++|+||+||.++|+  +.|.++|......               -++..+..+..
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem--l~G~~PF~~~~~~---------------~~~~~i~~~~~  364 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM--VDGEPPYFNEPPL---------------KAMKMIRDNLP  364 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHH--HHSSCTTTTSCHH---------------HHHHHHHHSCC
T ss_pred             ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH--HHCCCCCCCcCHH---------------HHHHHHHcCCC
Confidence            345688999999999999888899999999999999998  4577776421110               01111222222


Q ss_pred             CccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         86 PFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        86 p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      |...........++.+....+...|..++.+.+.++||++.+
T Consensus       365 ~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~  406 (423)
T 4fie_A          365 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK  406 (423)
T ss_dssp             CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence            211111112223344455556677888888888999999875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.34  E-value=1.1e-12  Score=100.94  Aligned_cols=41  Identities=34%  Similarity=0.669  Sum_probs=23.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+|||.|||||.+. .+|+.++|+||+|++++||++|+.||.
T Consensus       190 ~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~  230 (290)
T 3fpq_A          190 VIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             SCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            45566666666543 235555566666666666666555553

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.30  E-value=2e-12  Score=100.17  Aligned_cols=46  Identities=41%  Similarity=0.851  Sum_probs=38.2

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      .+.++||||.|||||++.+..|+.++|+||+||.++++  ..|.++|.
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem--l~G~~PF~  235 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL--VAGLPPFR  235 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH--HHSSCSSC
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHH--HhCCCCCC
Confidence            45678899999999999888888889999999999988  45777764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.28  E-value=1.4e-12  Score=102.70  Aligned_cols=81  Identities=33%  Similarity=0.607  Sum_probs=39.9

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHH-------------------HHhhcCCC
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR-------------------IEMALFPP  108 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~-------------------i~~~~~~~  108 (215)
                      +||+.||+||.+.+..|+.++|+||+||+++||++|+.||....  ..++...                   +....+..
T Consensus       186 ~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~  263 (350)
T 4b9d_A          186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--MKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKR  263 (350)
T ss_dssp             HSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             CCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccC
Confidence            45555555555544445555555555555555555555553321  1222222                   22233344


Q ss_pred             CCCCcccCCccCCCcchhhhhh
Q psy18117        109 LPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       109 ~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      .|..++.+.+.++||++.+-..
T Consensus       264 dP~~R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          264 NPRDRPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             SGGGSCCHHHHHTSHHHHTTGG
T ss_pred             ChhHCcCHHHHhcCHHhhcCCC
Confidence            4555556666777777765433

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.28  E-value=2.5e-12  Score=100.72  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=27.4

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      +++||+.|||||.+.+..|+.++|+||+||.++|+  +.|.++|
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyem--ltG~~Pf  256 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM--LNGCHPW  256 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH--HHSSCSS
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHH--HHCcCCC
Confidence            45667777777766666666666777777777666  3455555

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.24  E-value=3.3e-12  Score=98.83  Aligned_cols=45  Identities=33%  Similarity=0.596  Sum_probs=30.7

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+++||+.|||||.+.+..|+.++|+||+|+.++|+  +.|.++|.
T Consensus       183 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyem--ltG~~PF~  227 (304)
T 3ubd_A          183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM--LTGTLPFQ  227 (304)
T ss_dssp             CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHH--HHSSCSSC
T ss_pred             ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHH--HhCCCCCC
Confidence            4566777777777777766777777777777777777  34666553

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.24  E-value=3.7e-12  Score=101.09  Aligned_cols=51  Identities=25%  Similarity=0.507  Sum_probs=36.7

Q ss_pred             hcccCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCccccccchh
Q psy18117         45 DSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLN   95 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~   95 (215)
                      .+.+||+.|+|||.+.+. .|+.+.|+||+||+++||++|+.||+.+..+..
T Consensus       204 ~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~  255 (361)
T 4f9c_A          204 APRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT  255 (361)
T ss_dssp             --CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred             cccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHH
Confidence            445788888888887664 467778888888888888888888876554433

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.22  E-value=2.8e-12  Score=97.88  Aligned_cols=56  Identities=36%  Similarity=0.580  Sum_probs=33.7

Q ss_pred             cccCCCCCCChHHHhhCCC-CCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHh
Q psy18117         46 SFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~-~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      +.+||+.|||||.+.+..| +.++|+||+||++++|++|+.||...  +...+.+.+..
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--~~~~~~~~i~~  226 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--SIPVLFKNISN  226 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHH
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--CHHHHHHHHHc
Confidence            3577888888887766654 45678888888888888887777543  23344444443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.15  E-value=2.7e-11  Score=97.27  Aligned_cols=30  Identities=17%  Similarity=0.265  Sum_probs=22.5

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      +....+...|..++.+.+.++||++.++.+
T Consensus       324 Ll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          324 LLGRMLRFEPSARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTSGGGTTTCC
T ss_pred             HHHHHCcCChhHCcCHHHHhcCHhhCcCCC
Confidence            344455667888888899999999987654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.11  E-value=2.2e-11  Score=94.22  Aligned_cols=37  Identities=41%  Similarity=0.715  Sum_probs=31.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhh
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVD   45 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~   45 (215)
                      .+.+||+.|||||.+.+..|+.++|+||+||.++|+.
T Consensus       188 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell  224 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL  224 (299)
T ss_dssp             ----CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             CCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999989999999999999999995

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.07  E-value=4e-11  Score=100.60  Aligned_cols=46  Identities=26%  Similarity=0.465  Sum_probs=35.6

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ...+.+||+.|||||++.+..|+.++|+||+||.++++  +.|.++|.
T Consensus       312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyem--l~G~~Pf~  357 (573)
T 3uto_A          312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL--LSGLSPFG  357 (573)
T ss_dssp             EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH--HHSCCSSC
T ss_pred             ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHH--HHCCCCCC
Confidence            34567888888888888888888888888888888888  45776664

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.95  E-value=3.4e-10  Score=89.39  Aligned_cols=63  Identities=29%  Similarity=0.533  Sum_probs=48.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPLP  110 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~~  110 (215)
                      ..||+.|||||.+.+..|+.++|+||+|++++|+++ |+.||...... ..+.+.+.....++.|
T Consensus       247 ~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~~~i~~g~~~~~p  310 (353)
T 4ase_A          247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAP  310 (353)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCCCCC
T ss_pred             ccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHHHHHHcCCCCCCC
Confidence            578999999999999999999999999999999997 78898654332 3444555554444433

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.93  E-value=6.8e-10  Score=85.78  Aligned_cols=62  Identities=31%  Similarity=0.478  Sum_probs=48.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPLP  110 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~~  110 (215)
                      ..||+.||+||.+.+..|+.++|+||+|++++|+++ |+.||...  +..++...+.....++.|
T Consensus       190 ~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~~~~~~~p  252 (299)
T 4asz_A          190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQGRVLQRP  252 (299)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHHTCCCCCC
T ss_pred             eecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHcCCCCCCC
Confidence            358999999999999999999999999999999998 88898654  334555666655444333

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.93  E-value=9.2e-10  Score=85.41  Aligned_cols=62  Identities=31%  Similarity=0.462  Sum_probs=48.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPLP  110 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~~  110 (215)
                      ..||+.|||||.+....|+.++|+||+|++++|+++ |+.||...  +..++...+.....++.|
T Consensus       207 ~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~i~~~~~~~~p  269 (308)
T 4gt4_A          207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEMIRNRQVLPCP  269 (308)
T ss_dssp             SCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHHHHTTCCCCCC
T ss_pred             cccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCCCCCc
Confidence            578999999999999999999999999999999998 78888654  334555556554444333

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.90  E-value=1.2e-09  Score=85.49  Aligned_cols=60  Identities=25%  Similarity=0.373  Sum_probs=47.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      ..||+.||+||.+....|+.++|+||+|++++|+++ |+.||....  ..++...+.....++
T Consensus       220 ~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~~g~~~~  280 (329)
T 4aoj_A          220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--NTEAIDCITQGRELE  280 (329)
T ss_dssp             CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--HHHHHHHHHHTCCCC
T ss_pred             ccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCCCCC
Confidence            579999999999999999999999999999999998 888986543  344555555544333

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=98.89  E-value=1.7e-09  Score=83.42  Aligned_cols=102  Identities=24%  Similarity=0.382  Sum_probs=53.6

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|......              . ....+.....+..
T Consensus       174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~pf~~~~~~--------------~-~~~~~~~~~~~~~  236 (297)
T 3fxz_A          174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI--EGEPPYLNENPL--------------R-ALYLIATNGTPEL  236 (297)
T ss_dssp             CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH--HSSCTTTTSCHH--------------H-HHHHHHHHCSCCC
T ss_pred             CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH--hCCCCCCCCCHH--------------H-HHHHHHhCCCCCC
Confidence            4567777777777777767777777777777777773  355555321100              0 0111111111111


Q ss_pred             ccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         89 SKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        89 ~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ..........+.+....+...|.++..+.+.++||++..
T Consensus       237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~  275 (297)
T 3fxz_A          237 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI  275 (297)
T ss_dssp             SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred             CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence            111111222333444455566777777778888887653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.88  E-value=2.2e-09  Score=90.84  Aligned_cols=44  Identities=34%  Similarity=0.700  Sum_probs=23.3

Q ss_pred             ccccccCccccccccccc-CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~-~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      +.++||||.|||||++.. ..|+.++|+||+||+++||  +.|.++|
T Consensus       347 ~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEm--LtG~~PF  391 (689)
T 3v5w_A          347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL--LRGHSPF  391 (689)
T ss_dssp             CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH--HHSSCTT
T ss_pred             CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHH--HhCCCCC
Confidence            345555555555555542 3455555555555555555  3344444

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.87  E-value=1.2e-09  Score=86.73  Aligned_cols=103  Identities=21%  Similarity=0.376  Sum_probs=58.0

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      ..+.+||+.|+|||.+.+..++.++|+||+|+.++++  +.|.++|......               -.+..+..+...+
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~l--l~g~~Pf~~~~~~---------------~~~~~i~~~~~~~  237 (361)
T 2yab_A          175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL--LSGASPFLGDTKQ---------------ETLANITAVSYDF  237 (361)
T ss_dssp             CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH--HHSCCSSCCSSHH---------------HHHHHHHTTCCCC
T ss_pred             cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHH--HhCCCCCCCCCHH---------------HHHHHHHhcCCCC
Confidence            4567788888888888777778888888888888887  3466655321100               0011111111111


Q ss_pred             ccc-ccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         88 FSK-HISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        88 ~~~-~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ... ........+.+....+...|..++.+.+.++||++..
T Consensus       238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence            100 0011122334444455667788888888999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.83  E-value=2.2e-09  Score=83.13  Aligned_cols=46  Identities=35%  Similarity=0.620  Sum_probs=38.7

Q ss_pred             hcccCCCCCCChHHHhh---CCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         45 DSFLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~---~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .+.+||+.|||||.+..   ..|+.++|+||+|++++|+++|+.||...
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~  240 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI  240 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC
Confidence            44689999999999964   34788899999999999999999999653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.83  E-value=4.8e-09  Score=82.45  Aligned_cols=47  Identities=36%  Similarity=0.739  Sum_probs=38.8

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+++||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.
T Consensus       160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~Pf~  206 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM--CGRLPFY  206 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH--HSSCSSC
T ss_pred             CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHh--cCCCCCC
Confidence            3456789999999999998888999999999999999984  4666664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.82  E-value=2.7e-09  Score=86.97  Aligned_cols=103  Identities=27%  Similarity=0.437  Sum_probs=60.1

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+.+||+.|+|||.+.+..|+.++|+||+|+.++++  +.|.++|.....               ..+...+..+...+.
T Consensus       171 ~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel--l~G~~Pf~~~~~---------------~~~~~~i~~~~~~~~  233 (444)
T 3soa_A          171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL--LVGYPPFWDEDQ---------------HRLYQQIKAGAYDFP  233 (444)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH--HHSSCSCCCSSH---------------HHHHHHHHHTCCCCC
T ss_pred             ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHH--HhCCCCCCCccH---------------HHHHHHHHhCCCCCC
Confidence            457788888888888877788888888888888888  446666532110               001111222221111


Q ss_pred             ccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         89 SKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        89 ~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ... .......+.+....+...|..++.+.+.++||++...
T Consensus       234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            100 0111223334444556678888888889999998754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.81  E-value=5.6e-09  Score=82.30  Aligned_cols=46  Identities=39%  Similarity=0.772  Sum_probs=35.8

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      .+.+++||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.
T Consensus       174 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~Pf~  219 (345)
T 1xjd_A          174 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML--IGQSPFH  219 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSC
T ss_pred             cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHh--cCCCCCC
Confidence            456778888888888888878888888888888888884  4666653

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.80  E-value=1.7e-09  Score=86.42  Aligned_cols=43  Identities=40%  Similarity=0.845  Sum_probs=27.2

Q ss_pred             cccccCccccccccccc-CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~-~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+++||+.|+|||.+.+ ..++.++|+||+|+.++++  +.|.++|
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el--l~g~~pf  231 (388)
T 3oz6_A          188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI--LCGKPIF  231 (388)
T ss_dssp             --CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH--HHSSCSC
T ss_pred             cCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHH--HhCCCCC
Confidence            44567777777777664 4566677777777777776  3455555

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.78  E-value=1.6e-09  Score=85.29  Aligned_cols=107  Identities=22%  Similarity=0.289  Sum_probs=58.5

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      ...+.+||+.|+|||.+.+..|+.++|+||+|+.++++.  .|.++|....          .+  ....++..+..+..+
T Consensus       176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~Pf~~~~----------~~--~~~~~~~~i~~~~~~  241 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML--TGYTPFANGP----------DD--TPEEILARIGSGKFS  241 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HSSCSSCSST----------TS--CHHHHHHHHHHCCCC
T ss_pred             ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHh--cCCCCCCCCC----------cC--CHHHHHHHHccCCcc
Confidence            345677788888888777666777778888888888773  4555553110          00  001112222222222


Q ss_pred             ccccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         87 FFSKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        87 ~~~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      +.... .......+.+....+...|..++.+.+.++||++..
T Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            21100 011122333444455666777878888889999865

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.78  E-value=7.5e-09  Score=83.07  Aligned_cols=47  Identities=34%  Similarity=0.796  Sum_probs=40.0

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+++||+.|+|||.+.+..++.++|+||+|++++++  +.|.++|.
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyel--l~G~~Pf~  254 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM--MAGRSPFD  254 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH--HHSSCSST
T ss_pred             CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHH--HhCCCCCc
Confidence            446788999999999999988899999999999999999  45777763

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.77  E-value=6e-09  Score=85.37  Aligned_cols=31  Identities=19%  Similarity=0.226  Sum_probs=22.3

Q ss_pred             HHHhhcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        100 RIEMALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       100 ~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      .+....+...|..++.+.+.++||++...++
T Consensus       334 dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  364 (464)
T 3ttj_A          334 DLLSKMLVIDPAKRISVDDALQHPYINVWYD  364 (464)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             HHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence            3444455667888888889999999876543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.76  E-value=1e-08  Score=79.97  Aligned_cols=43  Identities=42%  Similarity=0.833  Sum_probs=30.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+..||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~--~g~~pf  241 (321)
T 2c30_A          199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV--DGEPPY  241 (321)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCTT
T ss_pred             ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH--hCCCCC
Confidence            4567777777777777666777777777777777773  355554

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=98.75  E-value=2.2e-09  Score=83.10  Aligned_cols=38  Identities=29%  Similarity=0.569  Sum_probs=28.2

Q ss_pred             cccccCcccccccccccC------CCCcccchhhhhHHHHHhhc
Q psy18117          9 DSFLGTPYYMSPERLKEL------KYSFPSDVWSLGCVLYEVDS   46 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~------~~~~~~~~~s~g~~~~e~~~   46 (215)
                      .+.+||+.|||||.+.+.      .|+.++|+||+|+.++|+.+
T Consensus       170 ~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t  213 (303)
T 3hmm_A          170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR  213 (303)
T ss_dssp             ----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH
Confidence            457899999999998754      25678899999999999854

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.74  E-value=5.4e-09  Score=80.84  Aligned_cols=43  Identities=35%  Similarity=0.706  Sum_probs=27.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       179 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             GGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             ccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            3566666666666666666666666666666666666666543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.73  E-value=1.2e-08  Score=87.23  Aligned_cols=47  Identities=32%  Similarity=0.684  Sum_probs=36.2

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+++||+.|+|||.+.+..|+.++|+||+|++++|+  +.|.++|.
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyel--ltG~~Pf~  543 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM--LAGQAPFE  543 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHH--HHSSCSSC
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHH--HcCCCCCC
Confidence            345678888888888888877888888888888888888  44666664

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.73  E-value=8.7e-09  Score=80.46  Aligned_cols=111  Identities=20%  Similarity=0.187  Sum_probs=47.9

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      ..+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.......        ...+..-++..+..+..++
T Consensus       166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~--------~~~~~~~~~~~i~~~~~~~  235 (325)
T 3kn6_A          166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML--SGQVPFQSHDRSL--------TCTSAVEIMKKIKKGDFSF  235 (325)
T ss_dssp             ------------------CCCCHHHHHHHHHHHHHHHH--HSSCTTC---------------CCCHHHHHHHHTTTCCCC
T ss_pred             ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHH--hCCCCCCCCcccc--------ccccHHHHHHHHHcCCCCC
Confidence            45678888999999888888888889999999988884  4666664321100        0000111122222222222


Q ss_pred             cccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         88 FSKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        88 ~~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      .... .......+.+....+...|.+++.+.+.+.||++...
T Consensus       236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            1110 0011222333334445668888888999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.72  E-value=1.2e-08  Score=79.53  Aligned_cols=42  Identities=40%  Similarity=0.823  Sum_probs=25.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  204 (318)
T 1fot_A          163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY  204 (318)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence            356666666666655555666666666666666666666654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.72  E-value=9.2e-09  Score=81.19  Aligned_cols=102  Identities=21%  Similarity=0.353  Sum_probs=55.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.....                .+...+..+...+.
T Consensus       191 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~----------------~~~~~i~~~~~~~~  252 (351)
T 3c0i_A          191 GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL--SGCLPFYGTKE----------------RLFEGIIKGKYKMN  252 (351)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSCSSHH----------------HHHHHHHHTCCCCC
T ss_pred             cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHH--HCCCCCCCcHH----------------HHHHHHHcCCCCCC
Confidence            4567777777777777777777777777777777773  45555432110                01111112221111


Q ss_pred             ccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         89 SKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        89 ~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ... .......+.+....+...|..+..+.+.++||++...
T Consensus       253 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            000 0111122333344445667777788888888887653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.71  E-value=1.2e-08  Score=80.69  Aligned_cols=47  Identities=32%  Similarity=0.641  Sum_probs=36.2

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+++||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~G~~Pf~  222 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML--AGQAPFE  222 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHH--HSSCSSC
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHH--cCCCCCC
Confidence            3456778888888888888778888888888888888884  4666654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.70  E-value=9e-09  Score=81.31  Aligned_cols=43  Identities=35%  Similarity=0.643  Sum_probs=32.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       219 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             CCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            4677777777777777777777777777777777777777754

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.70  E-value=1.4e-08  Score=78.12  Aligned_cols=101  Identities=22%  Similarity=0.371  Sum_probs=55.8

Q ss_pred             ccccccCcccccccccccCC---CCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcC
Q psy18117          8 VDSFLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQ   84 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~---~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~   84 (215)
                      ..+.+||+.|+|||.+.+..   ++.++|+||+|+.++++.  .|.++|.....               ..+...+....
T Consensus       194 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~--~g~~pf~~~~~---------------~~~~~~~~~~~  256 (298)
T 2zv2_A          194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV--FGQCPFMDERI---------------MCLHSKIKSQA  256 (298)
T ss_dssp             ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH--HSSCSSCCSSH---------------HHHHHHHHHCC
T ss_pred             ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH--HCCCCCCCccH---------------HHHHHHHhccc
Confidence            34567888888888887644   366778888888888884  46666542211               00111122222


Q ss_pred             CCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         85 SPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        85 ~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                      .++... .......+.+....+...|.+++.+.+.+.||++.
T Consensus       257 ~~~~~~-~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          257 LEFPDQ-PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CCCCSS-SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             CCCCCc-cccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            221111 11112233334444556677777777788888753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.70  E-value=2.9e-09  Score=84.19  Aligned_cols=44  Identities=43%  Similarity=0.868  Sum_probs=30.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .+||+.|++||.+.+..++.++|+||+|+++++|++|+.||...
T Consensus       184 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~  227 (353)
T 3txo_A          184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE  227 (353)
T ss_dssp             --CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence            46777777777776666777777777777777777777777543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.69  E-value=2.6e-08  Score=78.45  Aligned_cols=47  Identities=34%  Similarity=0.764  Sum_probs=38.9

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+.+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell--~g~~pf~  211 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM--AGRSPFD  211 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCTTT
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHH--hCCCCcC
Confidence            3456789999999999998888999999999999999984  4666663

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.68  E-value=9.1e-09  Score=81.60  Aligned_cols=43  Identities=47%  Similarity=0.896  Sum_probs=28.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|..||..
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  232 (362)
T 2bdw_A          190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD  232 (362)
T ss_dssp             SCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            4566677777766666666666777777777777777666643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.68  E-value=7.6e-09  Score=83.92  Aligned_cols=35  Identities=37%  Similarity=0.976  Sum_probs=18.4

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       258 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  292 (429)
T 3kvw_A          258 TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAEL  292 (429)
T ss_dssp             SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHH
T ss_pred             ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHH
Confidence            44555555555555544455555555555555555

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.68  E-value=8.6e-09  Score=82.87  Aligned_cols=24  Identities=21%  Similarity=0.375  Sum_probs=16.4

Q ss_pred             hcCCCCCCCcccCCccCCCcchhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ..+...|..++.+.+.++||++..
T Consensus       316 ~~L~~dP~~R~ta~e~L~hp~f~~  339 (405)
T 3rgf_A          316 KLLTMDPIKRITSEQAMQDPYFLE  339 (405)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred             HHccCCcccCCCHHHHhcChhhcc
Confidence            344555667777777888888765

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.65  E-value=1.6e-08  Score=80.68  Aligned_cols=35  Identities=40%  Similarity=0.936  Sum_probs=18.6

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       217 ~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  251 (382)
T 2vx3_A          217 QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEM  251 (382)
T ss_dssp             SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHH
Confidence            34555555555555554555555555555555555

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.65  E-value=1.7e-08  Score=78.51  Aligned_cols=41  Identities=37%  Similarity=0.652  Sum_probs=21.2

Q ss_pred             cCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+. .++.++|+||+|++++++++|+.||.
T Consensus       169 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  210 (317)
T 2pmi_A          169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP  210 (317)
T ss_dssp             CSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            445555555555432 24455555555555555555555543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.65  E-value=1.3e-08  Score=80.70  Aligned_cols=44  Identities=27%  Similarity=0.528  Sum_probs=28.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ...+||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|.
T Consensus       193 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~--~g~~pf~  236 (373)
T 1q8y_A          193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI--TGDFLFE  236 (373)
T ss_dssp             CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH--HSSCCC-
T ss_pred             CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHH--hCCCCCC
Confidence            3456677777777776666666777777777777763  3555553

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.65  E-value=1.9e-08  Score=79.05  Aligned_cols=26  Identities=19%  Similarity=0.221  Sum_probs=16.9

Q ss_pred             hhcCCCCCCCcccCCccCCCcchhhh
Q psy18117        103 MALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus       103 ~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ...+...|.+++.+.+.+.||++..+
T Consensus       315 ~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          315 RRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             HHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             HHHhcCChhhCcCHHHHhcChhhcCC
Confidence            33445566677777777777777654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.64  E-value=2.1e-08  Score=78.16  Aligned_cols=26  Identities=19%  Similarity=0.255  Sum_probs=16.5

Q ss_pred             hcCCCCCCCcccCCccCCCcchhhhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      ..+...|.+++.+.+.++||++..+.
T Consensus       311 ~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          311 KMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHhCcCcccccCHHHHhcCHHHHHHh
Confidence            34455566666777777777766543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.64  E-value=1.1e-08  Score=81.69  Aligned_cols=43  Identities=30%  Similarity=0.475  Sum_probs=35.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       253 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          253 DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             CCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence            4678888888888877788888888888888888888888754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.64  E-value=3.5e-08  Score=82.24  Aligned_cols=45  Identities=33%  Similarity=0.601  Sum_probs=36.7

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      +.+++||+.|+|||.+.+..|+.++|+||+|+.++|+.  .|.++|.
T Consensus       346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyell--tG~~PF~  390 (543)
T 3c4z_A          346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI--AARGPFR  390 (543)
T ss_dssp             BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSC
T ss_pred             cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHH--hCCCCCC
Confidence            45678999999999998888888899999999999984  4666664

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.63  E-value=7.7e-10  Score=83.72  Aligned_cols=79  Identities=13%  Similarity=-0.060  Sum_probs=59.2

Q ss_pred             hhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----------------
Q psy18117        125 IVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-----------------  187 (215)
Q Consensus       125 iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-----------------  187 (215)
                      +.+++.....  .+..++||||++|.+|.+.+         .+......++.++.+++..||+                 
T Consensus        72 vP~v~~~~~~--~~~~~lv~e~i~G~~l~~~~---------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~  140 (263)
T 3tm0_A           72 VPKVLHFERH--DGWSNLLMSEADGVLCSEEY---------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA  140 (263)
T ss_dssp             CCCEEEEEEE--TTEEEEEEECCSSEEHHHHC---------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred             CCeEEEEEec--CCceEEEEEecCCeehhhcc---------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence            4444444433  35678999999998887642         1233345778899999999998                 


Q ss_pred             ------------------------------------------CCccccccchhhhhhhccceeeccccc
Q psy18117        188 ------------------------------------------RRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       188 ------------------------------------------~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                                                                ..++|+|++|.|||++.++.+.|+|++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe  209 (263)
T 3tm0_A          141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLG  209 (263)
T ss_dssp             HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCT
T ss_pred             HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEch
Confidence                                                      458999999999999877778899986

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.63  E-value=1.5e-08  Score=82.47  Aligned_cols=46  Identities=41%  Similarity=0.873  Sum_probs=34.5

Q ss_pred             hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .+..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       307 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  352 (446)
T 4ejn_A          307 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  352 (446)
T ss_dssp             CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence            3356788888888877777777788888888888888887777543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=98.63  E-value=1.5e-08  Score=79.26  Aligned_cols=81  Identities=28%  Similarity=0.477  Sum_probs=51.6

Q ss_pred             cccCCCCCCChHHHhhCCCC-CCccchhhHHHHHHHHhcCCCccccccchhHH------------------HHHHHhhcC
Q psy18117         46 SFLGTPYYMSPERLKELKYS-FPSDVWSLGCVLYEMVALQSPFFSKHISLNGL------------------CKRIEMALF  106 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~-~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l------------------~k~i~~~~~  106 (215)
                      +.+||+.|++||.+.+..+. .++|+||+|++++++++|+.||.....  ..+                  ...+....+
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKYRIPFYMSTDCENLLKRFL  249 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCCCCCTTSCHHHHHHHHHHC
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCCCCCCCHHHHHHHHHHC
Confidence            35677777777777666554 467777777777777777777754321  111                  122223334


Q ss_pred             CCCCCCcccCCccCCCcchhhh
Q psy18117        107 PPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ...|..+..+.+.++||++...
T Consensus       250 ~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             CSSTTTSCCHHHHTTCTTTTTT
T ss_pred             CCChhHCcCHHHHhcCHhhcCC
Confidence            5567777788888899988654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.63  E-value=6.5e-09  Score=83.55  Aligned_cols=28  Identities=18%  Similarity=0.290  Sum_probs=17.0

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      +....+...|..+..+.+.+.||++...
T Consensus       301 li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          301 LIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            3334445556666666777778777653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.62  E-value=2.1e-08  Score=81.08  Aligned_cols=41  Identities=39%  Similarity=0.662  Sum_probs=21.8

Q ss_pred             cCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+. .++.+.|+||+||+++||++|+.||.
T Consensus       217 ~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~  258 (420)
T 1j1b_A          217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  258 (420)
T ss_dssp             CSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence            455555555555432 34555555555555555555555553

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.62  E-value=1.4e-08  Score=77.95  Aligned_cols=45  Identities=33%  Similarity=0.633  Sum_probs=28.5

Q ss_pred             ccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+.. ++.++|+||+|++++++++++.|++...
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~  206 (292)
T 3o0g_A          161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_dssp             CCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS
T ss_pred             CccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC
Confidence            35666677777665544 5666677777777777776666655443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.62  E-value=1.8e-08  Score=79.77  Aligned_cols=30  Identities=13%  Similarity=0.219  Sum_probs=21.9

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      +....+...|..++.+.+.++||++.+..+
T Consensus       293 li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          293 LLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence            334445667888888888999999887644

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.61  E-value=1.6e-08  Score=79.03  Aligned_cols=43  Identities=30%  Similarity=0.716  Sum_probs=32.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|..||..
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  219 (326)
T 2y0a_A          177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG  219 (326)
T ss_dssp             CCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred             ccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence            4577777788777666677777888888887888777777753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.61  E-value=2.8e-08  Score=79.40  Aligned_cols=43  Identities=26%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             ccccCccccccccccc--CCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117         10 SFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~--~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+||+.|+|||.+.+  ..++.++|+||+|+.++++.  .|.++|.
T Consensus       194 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~--~g~~pf~  238 (389)
T 3gni_B          194 YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA--NGHVPFK  238 (389)
T ss_dssp             TCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHH--HSSCTTT
T ss_pred             cccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHH--HCCCCCC
Confidence            3577777888887776  45777778888888887773  4655553

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.60  E-value=2.4e-08  Score=78.78  Aligned_cols=31  Identities=29%  Similarity=0.375  Sum_probs=22.2

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                      +....+...|..++.+.+.++||++.++...
T Consensus       294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  324 (360)
T 3e3p_A          294 LLSALLQYLPEERMKPYEALCHPYFDELHDP  324 (360)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred             HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence            4444556667777788888999998876554

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.60  E-value=2.7e-08  Score=79.02  Aligned_cols=44  Identities=27%  Similarity=0.729  Sum_probs=31.8

Q ss_pred             cccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         46 SFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      +..||+.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3567888888888765 4577778888888888888888777754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.60  E-value=3.4e-08  Score=81.46  Aligned_cols=44  Identities=41%  Similarity=0.828  Sum_probs=31.3

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+||+.|+|||.+. ..|+.++|+||+|+.++++  +.|.++|.
T Consensus       195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~l--l~g~~pf~  238 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFIL--LAGYPPFG  238 (494)
T ss_dssp             BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHH--HHSSCSSC
T ss_pred             ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHH--HhCCCCCC
Confidence            34567888888888776 4577778888888888877  34666553

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.59  E-value=2.7e-08  Score=79.01  Aligned_cols=26  Identities=15%  Similarity=0.218  Sum_probs=16.3

Q ss_pred             cCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        105 LFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       105 ~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      .+...|..++.+.+.+.||++..+.+
T Consensus       291 mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          291 MLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HccCChhHCCCHHHHhcChHHHhhcC
Confidence            33445666667777777887766544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.59  E-value=1.5e-08  Score=79.48  Aligned_cols=28  Identities=18%  Similarity=0.331  Sum_probs=18.5

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      +....+...|..+..+.+.++||++...
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHccCChhhCcCHHHHhcCccccCC
Confidence            3334445667777777788888887653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.59  E-value=4.1e-08  Score=78.03  Aligned_cols=43  Identities=30%  Similarity=0.726  Sum_probs=29.4

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       201 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  244 (371)
T 4exu_A          201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG  244 (371)
T ss_dssp             TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence            456777777777655 4566677777777777777777766643

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.59  E-value=1.7e-08  Score=80.26  Aligned_cols=42  Identities=33%  Similarity=0.668  Sum_probs=22.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       186 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  227 (371)
T 2xrw_A          186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  227 (371)
T ss_dssp             ----CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            345666666666655555556666666666666666655553

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.59  E-value=4.4e-08  Score=75.93  Aligned_cols=41  Identities=37%  Similarity=0.703  Sum_probs=26.0

Q ss_pred             cCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+ ..++.++|+||+|++++++++|+.||.
T Consensus       180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence            56666666666654 335666666666666666666666664

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.58  E-value=2.3e-08  Score=81.69  Aligned_cols=39  Identities=31%  Similarity=0.662  Sum_probs=26.5

Q ss_pred             ccccccCccccccccc-ccCCCCcccchhhhhHHHHHhhc
Q psy18117          8 VDSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDS   46 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~-~~~~~~~~~~~~s~g~~~~e~~~   46 (215)
                      ..+.+||+.|+|||.+ ....|+.++|+||+||+++|+.+
T Consensus       240 ~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          240 LTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             -----CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             ccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            4567888888888875 45568888888888888888853

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.58  E-value=2.6e-08  Score=77.66  Aligned_cols=104  Identities=18%  Similarity=0.230  Sum_probs=57.2

Q ss_pred             ccccccCcccccccccccCCC-CcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~-~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      ..+.+||+.|+|||.+.+..+ +.++|+||+|+.++++.  .|.++|..+..        ...      ...........
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~--------~~~------~~~~~~~~~~~  227 (323)
T 3tki_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML--AGELPWDQPSD--------SCQ------EYSDWKEKKTY  227 (323)
T ss_dssp             BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHH--HSSCSCSSSCT--------TSH------HHHHHHTTCTT
T ss_pred             cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHH--hCCCCCCCCch--------HHH------HHHHHhccccc
Confidence            346778888888888876665 66788888888888884  46666532110        000      00111111111


Q ss_pred             ccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      . ............+....+...|.+++.+.+.++||++.+.
T Consensus       228 ~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          228 L-NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             S-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             C-CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence            0 0000111222333444456678888888888899988654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.58  E-value=1.7e-08  Score=80.87  Aligned_cols=27  Identities=37%  Similarity=0.434  Sum_probs=17.1

Q ss_pred             hcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      ..+...|..++.+.+.+.||++..+..
T Consensus       304 ~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          304 RLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             HHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             HHhCCChhhCCCHHHHhcChhhhhhcc
Confidence            334455666667777777887766543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.57  E-value=1.6e-08  Score=79.70  Aligned_cols=45  Identities=33%  Similarity=0.683  Sum_probs=34.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||....
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  254 (349)
T 2w4o_A          210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER  254 (349)
T ss_dssp             ---CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred             ccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence            568888888888877778888888888888888888888886543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.57  E-value=4.1e-08  Score=79.66  Aligned_cols=38  Identities=32%  Similarity=0.655  Sum_probs=27.8

Q ss_pred             ccccccCccccccccc-ccCCCCcccchhhhhHHHHHhh
Q psy18117          8 VDSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVD   45 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~-~~~~~~~~~~~~s~g~~~~e~~   45 (215)
                      ..+.+||+.|+|||.+ ....|+.++|+||+||.++|+.
T Consensus       208 ~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             ---CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            4677888888888875 4456888888888888888884

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.56  E-value=3e-08  Score=78.31  Aligned_cols=35  Identities=34%  Similarity=0.710  Sum_probs=18.3

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  231 (350)
T 1rdq_E          197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             cccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence            44555555555555544455555555555555555

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.56  E-value=3.6e-08  Score=81.14  Aligned_cols=103  Identities=26%  Similarity=0.442  Sum_probs=57.5

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      ..+.+||+.|+|||.+.+ .|+.++|+||+|+.++++  +.|.++|......               -++..+..+..++
T Consensus       180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l--l~g~~pf~~~~~~---------------~~~~~i~~~~~~~  241 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL--LSGTPPFYGKNEY---------------DILKRVETGKYAF  241 (486)
T ss_dssp             --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHH--HHSSCSSCCSSHH---------------HHHHHHHHTCCCS
T ss_pred             cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHH--HhCCCCCCCCCHH---------------HHHHHHHhCCCCC
Confidence            346778888888888875 588888888888888888  4466665321100               0111222222221


Q ss_pred             cccc-cchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         88 FSKH-ISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        88 ~~~~-~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      .... .......+.+....+...|..++.+.+.+.||++.+.
T Consensus       242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            1100 0111222333444455667777777788888887654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.56  E-value=2.4e-08  Score=77.86  Aligned_cols=42  Identities=38%  Similarity=0.888  Sum_probs=25.0

Q ss_pred             cCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .|++.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       191 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~  233 (330)
T 3nsz_A          191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH  233 (330)
T ss_dssp             CSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            45556666666554 3355556666666666666666666543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.56  E-value=4.9e-08  Score=76.95  Aligned_cols=43  Identities=44%  Similarity=0.855  Sum_probs=25.2

Q ss_pred             ccCCCCCCChHHHh---hCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~---~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.   ...++.++|+||+|++++++++|+.||..
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  255 (348)
T 1u5q_A          210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  255 (348)
T ss_dssp             CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            45666666666653   23355556666666666666666666543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.55  E-value=1.8e-08  Score=79.97  Aligned_cols=42  Identities=24%  Similarity=0.384  Sum_probs=25.3

Q ss_pred             cCCCCCCChHHHhh--CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~~~--~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .||+.|++||.+.+  ..++.++|+||+|++++++++|+.||..
T Consensus       252 ~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             GSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             cCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            44566666666654  3455566666666666666666666543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.55  E-value=1.9e-08  Score=81.27  Aligned_cols=43  Identities=37%  Similarity=0.712  Sum_probs=23.4

Q ss_pred             cccccCccccccccccc---CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~---~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|+|||.+.+   ..++.++|+||+|+.++++.  .|.++|
T Consensus       299 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll--tg~~pf  344 (419)
T 3i6u_A          299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL--SGYPPF  344 (419)
T ss_dssp             ------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH--HSSCSS
T ss_pred             cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH--HCCCCC
Confidence            45667777777777642   44566677777777777763  355554

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.55  E-value=5.1e-08  Score=74.61  Aligned_cols=44  Identities=36%  Similarity=0.591  Sum_probs=35.0

Q ss_pred             ccCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+. .++.++|+||+|++++++++|+.||...
T Consensus       160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  204 (288)
T 1ob3_A          160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV  204 (288)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            4688899999988654 4788899999999999999998888643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.55  E-value=4.7e-08  Score=77.85  Aligned_cols=42  Identities=48%  Similarity=0.892  Sum_probs=21.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+||+.|++||.+.+..++..+|+||+|++++||++|..||.
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~  240 (373)
T 2r5t_A          199 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY  240 (373)
T ss_dssp             BSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence            345555555555544445555555555555555555555543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.55  E-value=3.6e-08  Score=75.11  Aligned_cols=41  Identities=46%  Similarity=0.879  Sum_probs=25.4

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  208 (284)
T 3kk8_A          168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW  208 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence            45666666666655555566666666666666666666654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.54  E-value=2.1e-08  Score=80.19  Aligned_cols=80  Identities=24%  Similarity=0.371  Sum_probs=41.0

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccccc--------------------chhHHHHHHHhhcCC
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI--------------------SLNGLCKRIEMALFP  107 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~--------------------~~~~l~k~i~~~~~~  107 (215)
                      .||+.|++||.+....++.++|+||+|++++++++|..||.....                    ......+.+....+.
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  290 (387)
T 1kob_A          211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ  290 (387)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSC
T ss_pred             ccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcC
Confidence            455555555555554455555555555555555555555533211                    011112223333344


Q ss_pred             CCCCCcccCCccCCCcchhh
Q psy18117        108 PLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       108 ~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ..|..+..+.+.++||++..
T Consensus       291 ~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          291 KEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             SSGGGSCCHHHHHTSTTTSS
T ss_pred             CChhHCcCHHHHhhCccccC
Confidence            45666666667777777654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.54  E-value=3.6e-08  Score=82.56  Aligned_cols=45  Identities=40%  Similarity=0.833  Sum_probs=33.4

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+||+.|+|||.+.+..|+.++|+||+|+.++++.  .|.++|.
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLl--tG~~PF~  386 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI--AGQSPFQ  386 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHH--HSSCSSS
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHH--hCCCCCc
Confidence            35567888888888887777788888888888888873  4666553

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.54  E-value=3.6e-08  Score=76.86  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=19.4

Q ss_pred             hhcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117        103 MALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus       103 ~~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                      ...+...|..++.+.+.++||++..+...
T Consensus       263 ~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          263 TKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             HHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence            33445566677777788888888776544

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.53  E-value=6.2e-08  Score=75.29  Aligned_cols=43  Identities=35%  Similarity=0.689  Sum_probs=30.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|+.||..
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (326)
T 1blx_A          179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  221 (326)
T ss_dssp             CCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence            4567777777777666677777777777777777777777643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.53  E-value=1e-07  Score=73.68  Aligned_cols=43  Identities=40%  Similarity=0.905  Sum_probs=27.0

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      ....||+.|+|||.+.+..++.++|+||+|+.++++.  .|.++|
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~--~g~~p~  225 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA--EGKPPY  225 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHH--HSSCTT
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHH--hCCCCC
Confidence            3456666777777666666666667777777666663  344444

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.53  E-value=3.8e-08  Score=78.50  Aligned_cols=41  Identities=29%  Similarity=0.639  Sum_probs=23.8

Q ss_pred             cCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+.. ++.++|+||+|++++++++|+.||.
T Consensus       202 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  243 (383)
T 3eb0_A          202 ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFS  243 (383)
T ss_dssp             CCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCC
Confidence            4555666666554432 5555666666666666666665554

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.53  E-value=2.7e-08  Score=78.85  Aligned_cols=82  Identities=27%  Similarity=0.414  Sum_probs=47.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCC-ccchhhHHHHHHHHhcCCCccccccc--hh--------------------HHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFP-SDVWSLGCVLYEMVALQSPFFSKHIS--LN--------------------GLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~-~diws~g~~l~e~~~g~~p~~~~~~~--~~--------------------~l~k~i~~  103 (215)
                      ..||+.|++||.+.+..+... +|+||+|++++++++|+.||......  ..                    ...+.+..
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  256 (361)
T 3uc3_A          177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLIS  256 (361)
T ss_dssp             ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHH
T ss_pred             CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHH
Confidence            467888888888776666544 68888888888888888777542110  11                    11122223


Q ss_pred             hcCCCCCCCcccCCccCCCcchhhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ..+...|..++.+...+.||++.+.
T Consensus       257 ~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          257 RIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHccCChhHCcCHHHHHhCcchhcC
Confidence            3344556666677777788877543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.53  E-value=3.6e-08  Score=77.48  Aligned_cols=80  Identities=33%  Similarity=0.479  Sum_probs=45.2

Q ss_pred             ccCCCCCCChHHHhh-----------CCCCCCccchhhHHHHHHHHhcCCCccccccchhH-------------------
Q psy18117         47 FLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNG-------------------   96 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-----------~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~-------------------   96 (215)
                      ..||+.|++||.+..           ..++.++|+||+|++++++++|+.||.........                   
T Consensus       169 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T 3dbq_A          169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK  248 (343)
T ss_dssp             -CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCH
T ss_pred             CcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCH
Confidence            467777777777654           34556677777777777777777776432111111                   


Q ss_pred             HHHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         97 LCKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        97 l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                      ....+....+...|..++.+.+.+.||++.
T Consensus       249 ~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            112222233444566666666677777654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.53  E-value=4.2e-08  Score=76.28  Aligned_cols=80  Identities=26%  Similarity=0.469  Sum_probs=45.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccc--------------------hhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS--------------------LNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~--------------------~~~l~k~i~~~~~  106 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|..||......                    .....+.+....+
T Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l  257 (321)
T 2a2a_A          178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL  257 (321)
T ss_dssp             CCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTS
T ss_pred             cCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHc
Confidence            35666777777766666666677777777777777776666432110                    0111222333344


Q ss_pred             CCCCCCcccCCccCCCcchh
Q psy18117        107 PPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~iv  126 (215)
                      ...|..++.+.+.++||++.
T Consensus       258 ~~dp~~Rps~~e~l~hp~~~  277 (321)
T 2a2a_A          258 VKETRKRLTIQEALRHPWIT  277 (321)
T ss_dssp             CSSTTTSCCHHHHHHSTTTS
T ss_pred             CCChhhCcCHHHHhcCcccc
Confidence            44566666666666777654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.52  E-value=2.2e-08  Score=79.70  Aligned_cols=44  Identities=36%  Similarity=0.751  Sum_probs=34.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|+.||...
T Consensus       248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  291 (373)
T 2x4f_A          248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD  291 (373)
T ss_dssp             CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence            35788888888877666777788888888888888888887544

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.52  E-value=3.8e-08  Score=76.89  Aligned_cols=44  Identities=32%  Similarity=0.540  Sum_probs=34.1

Q ss_pred             ccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+.. ++.++|+||+|++++++++|+.||...
T Consensus       197 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  241 (329)
T 3gbz_A          197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD  241 (329)
T ss_dssp             ---CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence            46788899999887644 788889999999999999988887643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.52  E-value=7.1e-08  Score=74.73  Aligned_cols=35  Identities=43%  Similarity=0.694  Sum_probs=22.7

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHhh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVD   45 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~   45 (215)
                      ...||+.|+|||.+.+ .++.++|+||+|+.++++.
T Consensus       215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~  249 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVA  249 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHH
T ss_pred             ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHH
Confidence            4556777777776654 5666667777777666663

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.51  E-value=2.6e-08  Score=78.12  Aligned_cols=44  Identities=34%  Similarity=0.616  Sum_probs=33.9

Q ss_pred             cccCCCCCCChHHHhh--CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         46 SFLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~--~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      +..||+.|++||.+..  ..++.++|+||+|++++++++|+.||..
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  278 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG  278 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            3568888888888864  4567788888888888888888888754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.51  E-value=4e-08  Score=76.73  Aligned_cols=44  Identities=39%  Similarity=0.660  Sum_probs=36.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  224 (327)
T 3a62_A          181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE  224 (327)
T ss_dssp             TSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence            56888888888887777888888888888888888888888643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.51  E-value=1.1e-08  Score=79.82  Aligned_cols=43  Identities=30%  Similarity=0.633  Sum_probs=26.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|..||..
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  205 (321)
T 1tki_A          163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA  205 (321)
T ss_dssp             EESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence            3466666666666555555666666666666666666666643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.51  E-value=3.3e-08  Score=79.13  Aligned_cols=42  Identities=50%  Similarity=0.848  Sum_probs=23.1

Q ss_pred             ccCCCCCCChHHHhh-----------CCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-----------~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+..           ..++.++|+||+|++++++++|+.||.
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~  268 (390)
T 2zmd_A          216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ  268 (390)
T ss_dssp             SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcch
Confidence            345666666665543           134445566666666666666665553

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.51  E-value=2e-08  Score=80.02  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=49.4

Q ss_pred             ccCCCCCCChHHHhhC-----------CCCCCccchhhHHHHHHHHhcCCCccccccc------------hhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKEL-----------KYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------------LNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~-----------~~~~~~diws~g~~l~e~~~g~~p~~~~~~~------------~~~l~k~i~~  103 (215)
                      ..| +.|++||.+...           .++.++|+||+|++++++++|+.||......            .....+.+..
T Consensus       263 ~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~  341 (377)
T 3byv_A          263 SVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLE  341 (377)
T ss_dssp             CCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHH
T ss_pred             CCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHH
Confidence            467 889999988776           6888889999999999999988887542210            0111222223


Q ss_pred             hcCCCCCCCcccCCccCCCcchhhhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      ..+...|..+....+.++||++..+.
T Consensus       342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          342 GFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             HHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             HHcCCCchhCCCHHHHhhChHHHHHH
Confidence            33344455555555556666555443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.50  E-value=4.2e-08  Score=76.55  Aligned_cols=43  Identities=33%  Similarity=0.730  Sum_probs=33.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....++.+.|+||+|++++++++|+.||..
T Consensus       193 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  235 (327)
T 3lm5_A          193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG  235 (327)
T ss_dssp             -CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4678888888887777777778888888888888888877754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.50  E-value=2.4e-08  Score=77.31  Aligned_cols=43  Identities=35%  Similarity=0.671  Sum_probs=31.0

Q ss_pred             ccCCCCCCChHHHhh-----CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKE-----LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-----~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+..     ..++.++|+||+|++++++++|+.||..
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  228 (316)
T 2ac3_A          181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG  228 (316)
T ss_dssp             -CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcc
Confidence            457778888887754     3366777888888888888888777754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.50  E-value=9.1e-08  Score=72.65  Aligned_cols=42  Identities=38%  Similarity=0.757  Sum_probs=29.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+ .++.++|+||+|++++++++|+.||..
T Consensus       168 ~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (277)
T 3f3z_A          168 KVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA  209 (277)
T ss_dssp             CCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCC
Confidence            457777777777644 366777777777777777777777643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.50  E-value=9.9e-08  Score=75.16  Aligned_cols=43  Identities=30%  Similarity=0.726  Sum_probs=30.1

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       183 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  226 (353)
T 3coi_A          183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG  226 (353)
T ss_dssp             -CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred             cccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            466777777777665 4566777777777777777777777653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.50  E-value=7.5e-08  Score=75.19  Aligned_cols=44  Identities=34%  Similarity=0.591  Sum_probs=34.5

Q ss_pred             ccCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+. .++.++|+||+|++++++++|+.||...
T Consensus       184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  228 (331)
T 4aaa_A          184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD  228 (331)
T ss_dssp             CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            5688888888887664 5677788888888888888888877543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.50  E-value=2.5e-08  Score=78.27  Aligned_cols=28  Identities=7%  Similarity=-0.005  Sum_probs=19.2

Q ss_pred             HHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117        100 RIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       100 ~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      .+....+...|..++.+.+.++||++..
T Consensus       237 ~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          237 SLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             HHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            3444455566777778888888988764

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.49  E-value=1.3e-07  Score=72.70  Aligned_cols=103  Identities=26%  Similarity=0.424  Sum_probs=53.0

Q ss_pred             cccccCccccccccc-----ccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhc
Q psy18117          9 DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVAL   83 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~-----~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g   83 (215)
                      .+..||+.|+|||.+     ....++.++|+||+|+.++++.  .|.++|.....               .-.......+
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~---------------~~~~~~~~~~  237 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA--QIEPPHHELNP---------------MRVLLKIAKS  237 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH--HSSCTTTTSCH---------------HHHHHHHHHS
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh--cCCCCCccCCH---------------HHHHHHHhcc
Confidence            356788888888887     3456777888888888888874  45544432100               0011222222


Q ss_pred             CCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         84 QSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        84 ~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ..+..............+....+...|..++.+...++||++..+
T Consensus       238 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          238 DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             CCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             CCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            222111111111122333334445667777777888888887653

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.49  E-value=2.9e-08  Score=80.01  Aligned_cols=43  Identities=44%  Similarity=0.784  Sum_probs=23.9

Q ss_pred             cccccCcccccccccccCC----CCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELK----YSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~----~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|+|||.+....    |+.++|+||+|+.++++.  .|.++|
T Consensus       227 ~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell--~G~~Pf  273 (410)
T 3v8s_A          227 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML--VGDTPF  273 (410)
T ss_dssp             CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHH--HSSCTT
T ss_pred             cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHH--hCCCCC
Confidence            3556666666666665433    555566666666666662  344444

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.48  E-value=1e-07  Score=78.86  Aligned_cols=83  Identities=27%  Similarity=0.412  Sum_probs=47.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccccc--------------------chhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI--------------------SLNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~--------------------~~~~l~k~i~~~~~  106 (215)
                      ..||+.|++||.+. ..++.++|+||+|++++++++|..||.....                    ......+.+....+
T Consensus       208 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  286 (504)
T 3q5i_A          208 RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLML  286 (504)
T ss_dssp             CCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHT
T ss_pred             ccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHc
Confidence            34666666666554 2355556666666666666666666543211                    00111223333444


Q ss_pred             CCCCCCcccCCccCCCcchhhhhh
Q psy18117        107 PPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      ...|..++.+.+.++||++.+...
T Consensus       287 ~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          287 TYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CCChhHCCCHHHHhcCHhhhhchh
Confidence            556778888888999999876543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.48  E-value=1.9e-07  Score=71.44  Aligned_cols=42  Identities=33%  Similarity=0.655  Sum_probs=26.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+. ..++.++|+||+|++++++++|+.||..
T Consensus       190 ~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          190 VIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             SCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            35666677776554 3356666777777777777776666643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.48  E-value=4.4e-08  Score=80.55  Aligned_cols=82  Identities=28%  Similarity=0.468  Sum_probs=51.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccc--------------------hhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS--------------------LNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~--------------------~~~l~k~i~~~~~  106 (215)
                      ..||+.|++||.+.+ .++.++|+||+|++++++++|..||......                    .....+.+....+
T Consensus       188 ~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  266 (484)
T 3nyv_A          188 KIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKML  266 (484)
T ss_dssp             HTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHT
T ss_pred             CCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHC
Confidence            457778888887654 5777778888888888888877777432110                    0111222333344


Q ss_pred             CCCCCCcccCCccCCCcchhhhh
Q psy18117        107 PPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus       107 ~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      ...|..++.+.+.++||++....
T Consensus       267 ~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          267 TYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             CSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CCChhHCcCHHHHhhChhhcccc
Confidence            45567777777888898887643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.48  E-value=3.9e-08  Score=77.64  Aligned_cols=42  Identities=50%  Similarity=0.821  Sum_probs=23.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            345555555555555555555555555555555555555553

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.47  E-value=1.3e-07  Score=73.23  Aligned_cols=41  Identities=41%  Similarity=0.750  Sum_probs=20.6

Q ss_pred             cCCCCCCChHHHh-----hCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~-----~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.     ...++.++|+||+|++++++++|+.||.
T Consensus       185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (318)
T 2dyl_A          185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK  230 (318)
T ss_dssp             --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence            4555566666552     2334455566666666666666555554

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.47  E-value=5e-08  Score=79.26  Aligned_cols=41  Identities=46%  Similarity=0.907  Sum_probs=19.1

Q ss_pred             cCCCCCCChHHHh-----hCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~-----~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      +||+.|++||.+.     ...++.++|+||+|++++||++|+.||.
T Consensus       237 ~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~  282 (437)
T 4aw2_A          237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY  282 (437)
T ss_dssp             CSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence            4444555555443     1224444455555555555555544443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.47  E-value=7.4e-08  Score=74.39  Aligned_cols=43  Identities=35%  Similarity=0.646  Sum_probs=24.6

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  205 (311)
T 4agu_A          162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG  205 (311)
T ss_dssp             ----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            356666666666654 3456666666666666666666666543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.47  E-value=5.4e-08  Score=76.60  Aligned_cols=43  Identities=30%  Similarity=0.568  Sum_probs=24.2

Q ss_pred             cccccCccccccccccc-CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~-~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|+|||.+.+ ..++.++|+||+|+.++++.  .|.++|
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell--~g~~pf  229 (351)
T 3mi9_A          186 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW--TRSPIM  229 (351)
T ss_dssp             CSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHH--HSSCSC
T ss_pred             CCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHH--hCCCCC
Confidence            34556666666666554 33566666666666666663  344444

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.46  E-value=1.4e-07  Score=74.44  Aligned_cols=34  Identities=38%  Similarity=0.707  Sum_probs=15.5

Q ss_pred             cccCccccccccccc--CCCCcccchhhhhHHHHHh
Q psy18117         11 FLGTPYYMSPERLKE--LKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        11 ~~g~~~~~~p~~~~~--~~~~~~~~~~s~g~~~~e~   44 (215)
                      ++||+.|+|||.+.+  ..++.++|+||+|+.++++
T Consensus       220 ~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~el  255 (355)
T 1vzo_A          220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL  255 (355)
T ss_dssp             GGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHH
T ss_pred             cccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHH
Confidence            445555555555443  2234445555555555554

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.46  E-value=5.7e-08  Score=76.37  Aligned_cols=29  Identities=14%  Similarity=0.263  Sum_probs=19.2

Q ss_pred             hhcCCCCCCCcccCCccCCCcchhhhhhh
Q psy18117        103 MALFPPLPSGVLYSDKTLHHPNIVELRSA  131 (215)
Q Consensus       103 ~~~~~~~~~~~~~~~~~l~h~~iv~l~~~  131 (215)
                      ...+...|..+..+.+.++||++......
T Consensus       287 ~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          287 QRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             HHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            33445566777777788888888765443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.45  E-value=1.5e-07  Score=71.96  Aligned_cols=42  Identities=38%  Similarity=0.695  Sum_probs=27.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+. ..++.++|+||+|++++++++|+.||..
T Consensus       186 ~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~  227 (285)
T 3is5_A          186 AAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG  227 (285)
T ss_dssp             -CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence            45677777777653 3456667777777777777777777643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.45  E-value=7.1e-08  Score=73.31  Aligned_cols=43  Identities=42%  Similarity=0.826  Sum_probs=17.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  214 (278)
T 3cok_A          172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT  214 (278)
T ss_dssp             --------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4577778888877666677777888888888888887777653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.44  E-value=1.7e-07  Score=70.95  Aligned_cols=104  Identities=18%  Similarity=0.247  Sum_probs=57.6

Q ss_pred             ccccccCcccccccccccCCC-CcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~-~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      ....+||+.|+|||.+.+..+ +.++|+||+|+.++++.  .|..+|..+..        ....      ....... ..
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~--~g~~p~~~~~~--------~~~~------~~~~~~~-~~  226 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML--AGELPWDQPSD--------SCQE------YSDWKEK-KT  226 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHH--HSSCCCSCSCT--------TSHH------HHHHHTT-CT
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHH--hCCCCCCCCch--------HHHH------HHHhhhc-cc
Confidence            456788888999998876665 66789999998888884  46666532210        0000      0111111 11


Q ss_pred             ccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                      ..............+....+...|.++..+.+.++||++.+.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          227 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence            110000111222333444455667777788888888887653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.42  E-value=5.9e-08  Score=76.84  Aligned_cols=45  Identities=13%  Similarity=0.142  Sum_probs=36.9

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      +..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       244 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             CSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             eecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence            357888888888888777888888888888888888888887643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.42  E-value=9.6e-08  Score=75.44  Aligned_cols=43  Identities=28%  Similarity=0.600  Sum_probs=27.6

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+ ..++.++|+||+|++++++++|+.||..
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  236 (362)
T 3pg1_A          193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG  236 (362)
T ss_dssp             ---CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence            356677777777655 4466667777777777777777776643

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.42  E-value=8.3e-08  Score=77.89  Aligned_cols=81  Identities=22%  Similarity=0.372  Sum_probs=42.7

Q ss_pred             ccCCCCCCChHHHhh---CCCCCCccchhhHHHHHHHHh-cCCCcccccc-------------------chhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHI-------------------SLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~---~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~-------------------~~~~l~k~i~~  103 (215)
                      ..||+.|++||.+..   ..++.++|+||+|++++++++ |..||.....                   ......+.+..
T Consensus       186 ~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  265 (432)
T 3p23_A          186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIE  265 (432)
T ss_dssp             CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHH
T ss_pred             cCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHH
Confidence            346666666665542   233445566666666666665 4444421110                   01111233344


Q ss_pred             hcCCCCCCCcccCCccCCCcchhh
Q psy18117        104 ALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       104 ~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      ..+...|..+..+...+.||++..
T Consensus       266 ~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          266 KMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHHhCCHhhCCCHHHHHhCccccC
Confidence            445566777777778888888754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.42  E-value=1e-07  Score=72.71  Aligned_cols=43  Identities=30%  Similarity=0.522  Sum_probs=34.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..|++.|++||.+.+..++..+|+||+|++++++++|..||..
T Consensus       172 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  214 (284)
T 2vgo_A          172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS  214 (284)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence            4677888888888777777788888888888888888877754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.41  E-value=1.3e-07  Score=74.96  Aligned_cols=43  Identities=37%  Similarity=0.762  Sum_probs=30.7

Q ss_pred             ccCCCCCCChHHHhhC------CCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKEL------KYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~------~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+...      .++.++|+||+|++++++++|+.||..
T Consensus       259 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             CCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            4677778888876532      356677888888888888887777754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=98.40  E-value=8.3e-08  Score=74.52  Aligned_cols=43  Identities=30%  Similarity=0.651  Sum_probs=36.1

Q ss_pred             ccCCCCCCChHHHh--------hCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLK--------ELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~--------~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.        ...++.++|+||+|++++++++|+.||..
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  225 (319)
T 4euu_A          175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP  225 (319)
T ss_dssp             CCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             cccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            46889999999886        35577889999999999999999988853

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.40  E-value=1e-07  Score=72.44  Aligned_cols=44  Identities=32%  Similarity=0.578  Sum_probs=37.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+..++..+|+||+|++++++++|..||...
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  210 (279)
T 3fdn_A          167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN  210 (279)
T ss_dssp             -CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             cCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence            57889999999988877888899999999999999998888643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.40  E-value=1.2e-07  Score=74.49  Aligned_cols=35  Identities=34%  Similarity=0.690  Sum_probs=17.8

Q ss_pred             ccccCcccccccccccC-CCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~-~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+. .++.++|+||+|+.++++
T Consensus       171 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  206 (346)
T 1ua2_A          171 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL  206 (346)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccccCchHhhCCCCCCchhhhHhHHHHHHHH
Confidence            34555555555555432 245555555555555555

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.39  E-value=1.2e-07  Score=76.96  Aligned_cols=80  Identities=26%  Similarity=0.348  Sum_probs=42.4

Q ss_pred             ccCCCCCCChHHHhh-------CCCCCCccchhhHHHHHHHHh-cCCCccccccc---------------------hhHH
Q psy18117         47 FLGTPYYMSPERLKE-------LKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHIS---------------------LNGL   97 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-------~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~---------------------~~~l   97 (215)
                      ..||+.|++||.+.+       ..++.++|+||+|++++++++ |..||......                     ....
T Consensus       192 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  271 (434)
T 2rio_A          192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAE  271 (434)
T ss_dssp             ---CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHH
T ss_pred             CCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHH
Confidence            356666666666543       334555666666666666665 55555321110                     0111


Q ss_pred             HHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         98 CKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        98 ~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                      ...+....+...|..++.+...++||++.
T Consensus       272 ~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          272 ATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            22333344455677777777888888874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.39  E-value=4.2e-07  Score=72.64  Aligned_cols=36  Identities=44%  Similarity=0.809  Sum_probs=17.3

Q ss_pred             cccccCccccccccccc---CCCCcccchhhhhHHHHHh
Q psy18117          9 DSFLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~---~~~~~~~~~~s~g~~~~e~   44 (215)
                      .+++||+.|+|||.+..   ..|+.++|+||+|++++++
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~el  210 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL  210 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHH
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHH
Confidence            34455555555555432   2344445555555555554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.38  E-value=1.2e-07  Score=73.81  Aligned_cols=81  Identities=27%  Similarity=0.456  Sum_probs=37.8

Q ss_pred             cCCCCCCChHHHhhCCC-CCCccchhhHHHHHHHHhcCCCcccccc----------chhHHHHHHHhhcCCCCCCCcccC
Q psy18117         48 LGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSKHI----------SLNGLCKRIEMALFPPLPSGVLYS  116 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~-~~~~diws~g~~l~e~~~g~~p~~~~~~----------~~~~l~k~i~~~~~~~~~~~~~~~  116 (215)
                      .||+.|++||.+....+ +.++|+||+|++++++++|+.||.....          ........+....+...|.++..+
T Consensus       209 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  288 (320)
T 3a99_A          209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTF  288 (320)
T ss_dssp             CSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHHHHHHccCChhhCcCH
Confidence            45555555555544333 2344555555555555555555432100          001112223333344455666666


Q ss_pred             CccCCCcchhhh
Q psy18117        117 DKTLHHPNIVEL  128 (215)
Q Consensus       117 ~~~l~h~~iv~l  128 (215)
                      .+.++||++...
T Consensus       289 ~~ll~hp~~~~~  300 (320)
T 3a99_A          289 EEIQNHPWMQDV  300 (320)
T ss_dssp             HHHHTSGGGSSC
T ss_pred             HHHhcCHhhcCc
Confidence            666677766543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=98.37  E-value=3.9e-08  Score=76.47  Aligned_cols=37  Identities=41%  Similarity=0.722  Sum_probs=30.6

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhh
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVD   45 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~   45 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++.
T Consensus       234 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~  270 (332)
T 3qd2_B          234 TGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL  270 (332)
T ss_dssp             CSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHH
T ss_pred             cccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHH
Confidence            4567899999999988888888899999999998884

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.37  E-value=2.1e-07  Score=70.74  Aligned_cols=34  Identities=18%  Similarity=0.199  Sum_probs=21.2

Q ss_pred             cccCcccccccccccC-CCCcccchhhhhHHHHHh
Q psy18117         11 FLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        11 ~~g~~~~~~p~~~~~~-~~~~~~~~~s~g~~~~e~   44 (215)
                      ..||+.|+|||.+.+. .++.++|+||+|+.++++
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  224 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENYTHLPKADIFALALTVVCA  224 (289)
T ss_dssp             CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHH
Confidence            4566666666666543 344566666666666666

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.36  E-value=1.4e-07  Score=77.43  Aligned_cols=23  Identities=9%  Similarity=-0.019  Sum_probs=15.4

Q ss_pred             cCCCCCCCcccCCccCCCcchhh
Q psy18117        105 LFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus       105 ~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      .+...|..++.+.+.+.||++.+
T Consensus       250 ~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          250 MLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HcCCCchhCcCHHHHHhCHHhhh
Confidence            34455666777777778887754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.36  E-value=2.9e-07  Score=72.03  Aligned_cols=43  Identities=42%  Similarity=0.909  Sum_probs=29.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....++..+|+||+|++++++++|+.||..
T Consensus       201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             CCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence            3566777777777666666667777777777777777766643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.36  E-value=7.2e-08  Score=74.32  Aligned_cols=42  Identities=38%  Similarity=0.763  Sum_probs=27.7

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .||+.|++||.+.+..++.++|+||+|++++++++|..||..
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  209 (304)
T 2jam_A          168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE  209 (304)
T ss_dssp             HSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            466667777766555566666777777777777776666643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.35  E-value=3e-07  Score=70.39  Aligned_cols=43  Identities=42%  Similarity=0.909  Sum_probs=28.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|+.||..
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  217 (294)
T 2rku_A          175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  217 (294)
T ss_dssp             CCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             ccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3466667777776665566667777777777777777666643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.35  E-value=1.7e-07  Score=72.48  Aligned_cols=44  Identities=32%  Similarity=0.551  Sum_probs=34.2

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.. ..++.++|+||+|++++++++|+.||...
T Consensus       184 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  228 (320)
T 2i6l_A          184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA  228 (320)
T ss_dssp             GGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence            456788888888765 45777788888888888888888887643

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.35  E-value=1.2e-07  Score=73.93  Aligned_cols=43  Identities=23%  Similarity=0.240  Sum_probs=24.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~  219 (330)
T 2izr_A          177 LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG  219 (330)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccc
Confidence            3455555555555555555555666666666666655555543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.34  E-value=1.5e-07  Score=71.66  Aligned_cols=44  Identities=30%  Similarity=0.709  Sum_probs=36.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++|+.||...
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  214 (283)
T 3bhy_A          171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE  214 (283)
T ss_dssp             -CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             cCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence            46888899999888777888899999999999999998888643

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.34  E-value=1.6e-07  Score=71.64  Aligned_cols=44  Identities=41%  Similarity=0.687  Sum_probs=34.4

Q ss_pred             ccCCCCCCChHHH----hhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERL----KELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~----~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+    ....++.++|+||+|++++++++|+.||...
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  216 (290)
T 3fme_A          169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW  216 (290)
T ss_dssp             -CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred             cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc
Confidence            4688999999996    3445677889999999999999999888643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.33  E-value=8.3e-07  Score=68.55  Aligned_cols=44  Identities=32%  Similarity=0.552  Sum_probs=38.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            46999999999998888899999999999999999999998643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.33  E-value=1.2e-07  Score=73.38  Aligned_cols=44  Identities=43%  Similarity=0.770  Sum_probs=36.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       179 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  222 (311)
T 3ork_A          179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  222 (311)
T ss_dssp             ---CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            56899999999998888888899999999999999999998654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.33  E-value=3.9e-07  Score=70.80  Aligned_cols=43  Identities=37%  Similarity=0.701  Sum_probs=34.2

Q ss_pred             ccCCCCCCChHHHh---hCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~---~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.   ...++.++|+||+|++++++++|..||..
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (322)
T 2ycf_A          176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE  221 (322)
T ss_dssp             HHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred             ccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence            46888899999874   34567788999999999999998888754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.33  E-value=6.9e-07  Score=68.92  Aligned_cols=60  Identities=60%  Similarity=1.193  Sum_probs=44.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~  106 (215)
                      ..|++.|++||.+.+..++..+|+||+|++++++++|+.||.........+.+.+....+
T Consensus       196 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  255 (310)
T 2wqm_A          196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY  255 (310)
T ss_dssp             ---CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS
T ss_pred             cCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC
Confidence            578999999999988888889999999999999999999997665555555555554433

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.33  E-value=1.1e-07  Score=76.78  Aligned_cols=83  Identities=17%  Similarity=0.275  Sum_probs=50.6

Q ss_pred             ccCCCCCCChHHHh----------hCCCCCCccchhhHHHHHHHHhcCCCccccccc------------hhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLK----------ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS------------LNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~----------~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~------------~~~l~k~i~~~  104 (215)
                      ..| +.|++||.+.          ...++.++|+||+|++++++++|+.||......            .....+.+...
T Consensus       268 ~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~  346 (413)
T 3dzo_A          268 PIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEG  346 (413)
T ss_dssp             CCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHH
T ss_pred             CCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHH
Confidence            467 8888888873          233566788888888888888888887543210            11112223333


Q ss_pred             cCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        105 LFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       105 ~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      .+...|..+....+.++||++..+..
T Consensus       347 ~l~~dP~~Rpt~~~~l~~~~~~~~~~  372 (413)
T 3dzo_A          347 FLRYPKEDRLLPLQAMETPEYEQLRT  372 (413)
T ss_dssp             HTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HccCChhhCcCHHHHHhCHHHHHHHH
Confidence            44455666666666677776665543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.31  E-value=1.1e-06  Score=67.98  Aligned_cols=45  Identities=40%  Similarity=0.645  Sum_probs=38.2

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      +..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       198 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~  242 (309)
T 3p86_A          198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL  242 (309)
T ss_dssp             ----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             cCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            357999999999999888999999999999999999999998654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.31  E-value=2.7e-07  Score=70.79  Aligned_cols=44  Identities=34%  Similarity=0.802  Sum_probs=36.5

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.. ..++.++|+||+|++++++++|+.||...
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  230 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY  230 (303)
T ss_dssp             --CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence            468999999999865 45788899999999999999999998653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.30  E-value=2.9e-08  Score=74.65  Aligned_cols=25  Identities=8%  Similarity=-0.036  Sum_probs=23.1

Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      ++|+|++|.|||++.++.+.|+||+
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~  210 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCG  210 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCT
T ss_pred             EECCCCCCCcEEEECCcEEEEEcch
Confidence            9999999999999888788899996

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.30  E-value=2.2e-07  Score=71.52  Aligned_cols=42  Identities=38%  Similarity=0.798  Sum_probs=28.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+....++..+|+||+|++++++++|+.||.
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  220 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS  220 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCC
Confidence            356666777777766666666777777777777777766664

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.30  E-value=3.1e-08  Score=78.38  Aligned_cols=70  Identities=14%  Similarity=0.095  Sum_probs=55.3

Q ss_pred             HHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-------------------------------
Q psy18117        139 ELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-------------------------------  187 (215)
Q Consensus       139 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-------------------------------  187 (215)
                      ..++||||++|..+.+..      ...+++.....++.+++..|..||+                               
T Consensus       115 ~~~~vme~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKL  188 (359)
T ss_dssp             SCEEEEECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHh
Confidence            467899999997774311      1136677788888999999999996                               


Q ss_pred             ---------------------------CCccccccchhhhhhhccc--eeeccccc
Q psy18117        188 ---------------------------RRILHRGERETFLSVLGDC--VRTVSEQA  214 (215)
Q Consensus       188 ---------------------------~~i~HrDikp~Nil~~~~~--~~ki~D~~  214 (215)
                                                 ..++|+|++|.|||++.++  ++.|+||.
T Consensus       189 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe  244 (359)
T 3dxp_A          189 SETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWE  244 (359)
T ss_dssp             HCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCT
T ss_pred             cCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcc
Confidence                                       4689999999999998775  47899985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.29  E-value=2.3e-07  Score=72.07  Aligned_cols=44  Identities=43%  Similarity=0.879  Sum_probs=33.8

Q ss_pred             ccCCCCCCChHHHh-----hCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~-----~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.     ...++.++|+||+|++++++++|+.||...
T Consensus       189 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  237 (326)
T 2x7f_A          189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  237 (326)
T ss_dssp             --CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence            56889999999886     455778899999999999999999888543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.28  E-value=2.7e-07  Score=71.35  Aligned_cols=44  Identities=50%  Similarity=0.810  Sum_probs=31.9

Q ss_pred             ccCCCCCCChHHHhh-----------CCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKE-----------LKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-----------~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+..           ..++.++|+||+|++++++++|+.||...
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (313)
T 3cek_A          188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  242 (313)
T ss_dssp             --CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence            467888888888754           24566788888888888888888887543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.27  E-value=8.9e-07  Score=75.32  Aligned_cols=124  Identities=17%  Similarity=0.181  Sum_probs=60.7

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCCh---HHHhhCCCC-CCccchhhHHHHHHH-Hh
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---ERLKELKYS-FPSDVWSLGCVLYEM-VA   82 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~p---e~~~~~~~~-~~~diws~g~~l~e~-~~   82 (215)
                      .....||+.|+|||.+.+..++.++|+||+|+.++++  +.|.++|...   ......... ...+........... ..
T Consensus       180 ~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeL--ltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~  257 (676)
T 3qa8_A          180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC--ITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFS  257 (676)
T ss_dssp             CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHH--HSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCC
T ss_pred             cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHH--HHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccc
Confidence            3456788888888888877788888888888888888  4465555431   110000000 000000000000000 00


Q ss_pred             cCCCccc-cccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhhhhhc
Q psy18117         83 LQSPFFS-KHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELRSAFA  133 (215)
Q Consensus        83 g~~p~~~-~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~~~~  133 (215)
                      ...|... -..........+....+...|..+......+.||++..+.+...
T Consensus       258 ~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          258 SVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             SSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             cccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence            0001000 00012223344444555667888888888899999887766554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.27  E-value=2.1e-07  Score=72.41  Aligned_cols=42  Identities=43%  Similarity=0.766  Sum_probs=18.6

Q ss_pred             cCCCCCCChHHH----hhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERL----KELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~----~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .||+.|++||.+    ....++.++|+||+|++++++++|+.||..
T Consensus       186 ~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (327)
T 3aln_A          186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK  231 (327)
T ss_dssp             --------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             CCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            567777777776    334466667777777777777777777643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.26  E-value=6.2e-07  Score=70.92  Aligned_cols=44  Identities=18%  Similarity=0.152  Sum_probs=39.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       221 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          221 HDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             cCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            45999999999998888888999999999999999999999754

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.26  E-value=4.4e-08  Score=76.78  Aligned_cols=41  Identities=41%  Similarity=0.836  Sum_probs=15.4

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+....++.++|+||+|++++++++|..||.
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          190 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             CCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            45556666665544445555566666666666666655553

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.25  E-value=7.6e-07  Score=69.89  Aligned_cols=44  Identities=25%  Similarity=0.224  Sum_probs=39.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       220 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  263 (345)
T 2v62_A          220 HNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN  263 (345)
T ss_dssp             SCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred             cCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            57999999999998888889999999999999999999999653

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=98.25  E-value=6.6e-07  Score=68.66  Aligned_cols=44  Identities=41%  Similarity=0.631  Sum_probs=38.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~  215 (294)
T 4eqm_A          172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE  215 (294)
T ss_dssp             ---CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             cccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            57999999999999888999999999999999999999999654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.24  E-value=4.2e-07  Score=73.28  Aligned_cols=44  Identities=43%  Similarity=0.771  Sum_probs=29.2

Q ss_pred             ccCCCCCCChHHHhh-------CCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKE-------LKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-------~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .+||+.|++||.+..       ..++.++|+||+|++++||++|+.||...
T Consensus       223 ~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  273 (412)
T 2vd5_A          223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD  273 (412)
T ss_dssp             CCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             eccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence            467777777777652       33566677777777777777777776543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.24  E-value=7.3e-07  Score=70.18  Aligned_cols=45  Identities=22%  Similarity=0.124  Sum_probs=40.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||....
T Consensus       228 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          228 HEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             TCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             ccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            479999999999988888889999999999999999999997654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.24  E-value=5.3e-07  Score=69.09  Aligned_cols=43  Identities=35%  Similarity=0.783  Sum_probs=26.8

Q ss_pred             ccCCCCCCChHHHh------hCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLK------ELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~------~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..|++.|++||.+.      ...++..+|+||+|++++++++|+.||..
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  231 (298)
T 1phk_A          183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH  231 (298)
T ss_dssp             CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence            34666677777664      22345566777777777777777666643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.23  E-value=1.6e-06  Score=65.66  Aligned_cols=58  Identities=50%  Similarity=0.978  Sum_probs=44.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~  106 (215)
                      ..|++.|++||.+....++..+|+||+|++++++++|+.||...  ....+...+.....
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~  233 (279)
T 2w5a_A          176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKF  233 (279)
T ss_dssp             HHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCC
T ss_pred             cCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhccc
Confidence            57899999999998888888999999999999999999998654  23344444544433

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.22  E-value=1.4e-06  Score=69.10  Aligned_cols=55  Identities=25%  Similarity=0.406  Sum_probs=43.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||...  ....+...+..
T Consensus       246 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~--~~~~~~~~i~~  301 (367)
T 3l9p_A          246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--SNQEVLEFVTS  301 (367)
T ss_dssp             GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHT
T ss_pred             cCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHc
Confidence            467889999999998889999999999999999998 87888654  23344444443

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.22  E-value=5.6e-07  Score=68.80  Aligned_cols=43  Identities=42%  Similarity=0.875  Sum_probs=34.1

Q ss_pred             ccCCCCCCChHHHhhCC--CCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELK--YSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~--~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..|++.|++||.+....  ++..+|+||+|++++++++|+.||..
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            46888888888876543  66778889999988888888888754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.19  E-value=4e-07  Score=69.59  Aligned_cols=43  Identities=28%  Similarity=0.247  Sum_probs=34.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             cCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence            4678888888887777777778888888888888888888754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.19  E-value=5.8e-07  Score=68.79  Aligned_cols=44  Identities=25%  Similarity=0.225  Sum_probs=39.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          178 LSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence            56999999999998888888999999999999999999998653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.18  E-value=1.8e-06  Score=68.58  Aligned_cols=55  Identities=29%  Similarity=0.454  Sum_probs=42.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++|+++ |+.||....  ..++...+..
T Consensus       265 ~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~~~~~~~  320 (370)
T 2psq_A          265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKE  320 (370)
T ss_dssp             TTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHT
T ss_pred             CCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhc
Confidence            457788999999988889999999999999999998 888886542  2344444433

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.17  E-value=1.6e-06  Score=65.99  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=36.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+++.|++||.+....++.++|+||+|++++++++ |..||...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~  221 (281)
T 1mp8_A          177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  221 (281)
T ss_dssp             --CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence            356778999999988888899999999999999996 77788643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.17  E-value=1.2e-06  Score=68.97  Aligned_cols=45  Identities=31%  Similarity=0.549  Sum_probs=39.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||....
T Consensus       255 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  300 (359)
T 3vhe_A          255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  300 (359)
T ss_dssp             CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             cCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence            457888999999998889999999999999999998 888886544

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.15  E-value=7.8e-07  Score=68.02  Aligned_cols=43  Identities=28%  Similarity=0.247  Sum_probs=39.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||..
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 3uzp_A          175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             cccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            5799999999999888888899999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.15  E-value=1.8e-06  Score=65.00  Aligned_cols=45  Identities=27%  Similarity=0.558  Sum_probs=38.2

Q ss_pred             cccCCCCCCChHHHhhCCCCC---CccchhhHHHHHHHHhcCCCcccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSF---PSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~---~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      +..||+.|++||.+.+..+..   ++|+||+|++++++++|+.||...
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  214 (271)
T 3kmu_A          167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL  214 (271)
T ss_dssp             TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred             CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            357899999999998765554   599999999999999999998644

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.13  E-value=4.5e-07  Score=71.06  Aligned_cols=44  Identities=39%  Similarity=0.542  Sum_probs=27.4

Q ss_pred             ccCCCCCCChHHHhhC-CCCC-CccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKEL-KYSF-PSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~-~~~~-~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+. .++. ++|+||+|++++++++|+.||...
T Consensus       210 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  255 (348)
T 2pml_X          210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK  255 (348)
T ss_dssp             SCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            3566667777766554 3433 567777777777777776666543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.13  E-value=4.2e-07  Score=69.39  Aligned_cols=42  Identities=43%  Similarity=0.933  Sum_probs=33.9

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .|++.|++||.+.+ .++.++|+||+|++++++++|..||...
T Consensus       184 ~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~  225 (287)
T 2wei_A          184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK  225 (287)
T ss_dssp             HHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence            46778999998754 4777889999999999999998888654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=98.13  E-value=1e-06  Score=67.94  Aligned_cols=44  Identities=32%  Similarity=0.577  Sum_probs=37.7

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      +..||+.|++||.+.+..++.++|+||+|+++++++++..|+..
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             ccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            35789999999999888888899999999999999998877653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.13  E-value=2.4e-06  Score=64.86  Aligned_cols=44  Identities=27%  Similarity=0.517  Sum_probs=38.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~  218 (281)
T 3cc6_A          174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL  218 (281)
T ss_dssp             CCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence            457788999999988888999999999999999998 88898643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.12  E-value=8.7e-07  Score=68.42  Aligned_cols=42  Identities=45%  Similarity=0.848  Sum_probs=31.6

Q ss_pred             ccCCCCCCChHHHhhCCCC-CCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYS-FPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~-~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..|++.|++||.+....+. .++|+||+|++++++++|+.||.
T Consensus       198 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  240 (312)
T 2iwi_A          198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE  240 (312)
T ss_dssp             CCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence            4577888888887665543 36788888888888888887774

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=98.12  E-value=2.2e-06  Score=65.28  Aligned_cols=47  Identities=28%  Similarity=0.528  Sum_probs=38.5

Q ss_pred             ccCCCCCCChHHHh--hCCCCCCccchhhHHHHHHHHhcCCCccccccc
Q psy18117         47 FLGTPYYMSPERLK--ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS   93 (215)
Q Consensus        47 ~~gt~~y~~pe~~~--~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~   93 (215)
                      ..||+.|++||.+.  ...++.++|+||+|++++++++|+.||......
T Consensus       186 ~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  234 (287)
T 4f0f_A          186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG  234 (287)
T ss_dssp             CCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC
T ss_pred             cCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc
Confidence            57999999999983  344667899999999999999999998655433

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.11  E-value=2.9e-06  Score=66.06  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=38.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |+.||...
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  223 (327)
T 3poz_A          179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence            456788999999999889999999999999999999 88888644

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.10  E-value=2.1e-06  Score=66.19  Aligned_cols=45  Identities=31%  Similarity=0.549  Sum_probs=39.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||....
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence            457788999999988889999999999999999998 888886543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.10  E-value=2.5e-06  Score=64.39  Aligned_cols=44  Identities=34%  Similarity=0.603  Sum_probs=38.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  217 (271)
T 3dtc_A          174 AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI  217 (271)
T ss_dssp             --CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             CCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            57999999999998888899999999999999999999998654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.09  E-value=7.9e-07  Score=68.33  Aligned_cols=42  Identities=33%  Similarity=0.643  Sum_probs=25.7

Q ss_pred             cCCCCCCChHHHhhCCC--CCCccchhhHHHHHHHHhcCCCccc
Q psy18117         48 LGTPYYMSPERLKELKY--SFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~--~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      .||+.|++||.+.+...  +.++|+||+|++++++++|+.||..
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (305)
T 2wtk_C          172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG  215 (305)
T ss_dssp             CSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            46666677766654322  3456777777777777776666643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.09  E-value=5.5e-06  Score=63.21  Aligned_cols=57  Identities=30%  Similarity=0.572  Sum_probs=41.0

Q ss_pred             cccCCCCCCChHHHh---hCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHh
Q psy18117         46 SFLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~---~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ...||+.|++||.+.   ...++.++|+||+|++++++++|+.||.... ....+...+..
T Consensus       181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~  240 (289)
T 3og7_A          181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGR  240 (289)
T ss_dssp             ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHH
T ss_pred             ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhcc
Confidence            357999999999986   4456778999999999999999999986543 33344444443

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.09  E-value=3.2e-06  Score=65.85  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=38.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||...
T Consensus       179 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  223 (327)
T 3lzb_A          179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI  223 (327)
T ss_dssp             -CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            457778999999998889999999999999999999 88888644

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.09  E-value=4.3e-07  Score=68.78  Aligned_cols=44  Identities=32%  Similarity=0.627  Sum_probs=28.4

Q ss_pred             ccCCCCCCChHHHhhCCC-CCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~-~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+..+ +.++|+||+|++++++++|+.||...
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  214 (276)
T 2h6d_A          170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE  214 (276)
T ss_dssp             -------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence            457888888888766554 46788888888888888888887543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.08  E-value=3.3e-06  Score=65.90  Aligned_cols=55  Identities=24%  Similarity=0.396  Sum_probs=43.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++ |..||....  ..++...+..
T Consensus       236 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~  291 (343)
T 1luf_A          236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--HEEVIYYVRD  291 (343)
T ss_dssp             CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHHT
T ss_pred             CcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC--hHHHHHHHhC
Confidence            467888999999988889999999999999999998 888886542  2344444443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.08  E-value=4.1e-06  Score=65.14  Aligned_cols=44  Identities=27%  Similarity=0.455  Sum_probs=38.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  221 (325)
T 3kex_A          177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL  221 (325)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred             CCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence            457789999999998889999999999999999999 88888654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.08  E-value=2.4e-06  Score=65.15  Aligned_cols=43  Identities=30%  Similarity=0.469  Sum_probs=37.5

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .||+.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       174 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  217 (287)
T 1u59_A          174 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM  217 (287)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            45788999999988888889999999999999998 88888644

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.06  E-value=4.5e-06  Score=62.96  Aligned_cols=44  Identities=30%  Similarity=0.493  Sum_probs=38.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |..||...
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~  211 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  211 (269)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence            456778999999988889999999999999999999 78887543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.05  E-value=5e-06  Score=64.61  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=38.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |..||...
T Consensus       205 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~  249 (327)
T 2yfx_A          205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK  249 (327)
T ss_dssp             GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc
Confidence            467889999999988889999999999999999998 77787543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.05  E-value=3.2e-06  Score=64.65  Aligned_cols=37  Identities=32%  Similarity=0.570  Sum_probs=23.4

Q ss_pred             cccccCcccccccccccC-CCCcccchhhhhHHHHHhh
Q psy18117          9 DSFLGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEVD   45 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~-~~~~~~~~~s~g~~~~e~~   45 (215)
                      .+.+||+.|+|||.+.+. .++.++|+||+|+.++++.
T Consensus       188 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  225 (303)
T 1zy4_A          188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI  225 (303)
T ss_dssp             ------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHH
T ss_pred             ccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHH
Confidence            456778888888887653 5777788888888887774

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=98.04  E-value=6.1e-07  Score=69.84  Aligned_cols=34  Identities=41%  Similarity=0.723  Sum_probs=18.1

Q ss_pred             cccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         11 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        11 ~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      ..||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  223 (327)
T 3lxl_A          190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL  223 (327)
T ss_dssp             CCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CCccccccCHHHhccCCCChHHhHHHHHHHHHHH
Confidence            3445555555555544455555555555555555

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.04  E-value=1.3e-06  Score=71.86  Aligned_cols=43  Identities=28%  Similarity=0.251  Sum_probs=33.8

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+||+.|+|||.+.+..++.++|+||+|++++++.  .|.++|.
T Consensus       172 ~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ell--tG~~Pf~  214 (483)
T 3sv0_A          172 NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL--RGSLPWQ  214 (483)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH--HSSCTTS
T ss_pred             ccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHH--hCCCCCc
Confidence            677888888888888878888888888888888884  4666653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.04  E-value=4.5e-06  Score=66.48  Aligned_cols=56  Identities=30%  Similarity=0.465  Sum_probs=43.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||...  ...++...+...
T Consensus       253 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~--~~~~~~~~~~~~  309 (382)
T 3tt0_A          253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEG  309 (382)
T ss_dssp             CCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTT
T ss_pred             CCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC
Confidence            456788999999988888999999999999999998 88887544  334444444443

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.04  E-value=5e-06  Score=67.71  Aligned_cols=44  Identities=34%  Similarity=0.520  Sum_probs=38.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+++.|++||.+....++.++|+||+|++++|+++ |+.||...
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~  390 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  390 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            367789999999988889999999999999999998 88888643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.03  E-value=3.3e-06  Score=65.76  Aligned_cols=54  Identities=26%  Similarity=0.480  Sum_probs=41.3

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      .||+.|++||.+....++.++|+||+|++++++++ |..||...  ....+...+..
T Consensus       215 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--~~~~~~~~~~~  269 (325)
T 3kul_A          215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--TNRDVISSVEE  269 (325)
T ss_dssp             -CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHT
T ss_pred             CCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHc
Confidence            45678999999988888889999999999999998 88888643  22344444443

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.03  E-value=5e-06  Score=64.40  Aligned_cols=44  Identities=25%  Similarity=0.481  Sum_probs=37.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+++.|++||.+.+..++.++|+||+|++++++++ |..||...
T Consensus       199 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~  243 (323)
T 3qup_A          199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI  243 (323)
T ss_dssp             --CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence            356778999999998889999999999999999999 77787643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.03  E-value=4e-06  Score=65.55  Aligned_cols=45  Identities=33%  Similarity=0.488  Sum_probs=38.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||....
T Consensus       234 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            346778999999988889999999999999999998 888886543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=98.03  E-value=1.6e-06  Score=67.31  Aligned_cols=43  Identities=33%  Similarity=0.518  Sum_probs=39.1

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .||+.|++||.+....++.++|+||+|++++++++|+.||...
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             EEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence            4889999999998888999999999999999999999998653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.03  E-value=5.1e-06  Score=67.72  Aligned_cols=56  Identities=25%  Similarity=0.370  Sum_probs=43.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      ..+++.|++||.+....++.++|+||+|++++|+++ |+.||...  ...++...+...
T Consensus       345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~~  401 (454)
T 1qcf_A          345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERG  401 (454)
T ss_dssp             SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHHT
T ss_pred             CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcC
Confidence            346678999999988889999999999999999999 88888643  233444444443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.02  E-value=6.7e-06  Score=62.29  Aligned_cols=44  Identities=34%  Similarity=0.520  Sum_probs=37.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  218 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  218 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            467889999999988888999999999999999998 88888543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.02  E-value=1.7e-06  Score=66.29  Aligned_cols=35  Identities=34%  Similarity=0.605  Sum_probs=21.9

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      ...||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       188 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  222 (302)
T 4e5w_A          188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL  222 (302)
T ss_dssp             CTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccCCeeecCCCCCcchhHHHHHHHHHHH
Confidence            44556666666666655566666666666666666

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.01  E-value=6.3e-07  Score=69.69  Aligned_cols=41  Identities=29%  Similarity=0.468  Sum_probs=20.4

Q ss_pred             cCCCCCCChHHHhhC-----CCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKEL-----KYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~-----~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+.     .++.++|+||+|++++++++|+.||.
T Consensus       194 ~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  239 (322)
T 3soc_A          194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD  239 (322)
T ss_dssp             CCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSS
T ss_pred             ccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCC
Confidence            445555555554431     12234455555555555555555553

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.00  E-value=4.7e-06  Score=63.29  Aligned_cols=44  Identities=25%  Similarity=0.405  Sum_probs=38.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~  225 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF  225 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            456778999999998889999999999999999998 88888643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=97.99  E-value=6.9e-06  Score=62.76  Aligned_cols=45  Identities=24%  Similarity=0.474  Sum_probs=38.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++++++|+.|++...
T Consensus       188 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~  232 (298)
T 3pls_A          188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI  232 (298)
T ss_dssp             TTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             CCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC
Confidence            457788999999988888899999999999999999777766543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.99  E-value=2.3e-06  Score=66.03  Aligned_cols=44  Identities=39%  Similarity=0.810  Sum_probs=33.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++++++|+.||...
T Consensus       195 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  238 (309)
T 2h34_A          195 TVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD  238 (309)
T ss_dssp             --CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred             cCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence            56889999999887777888899999999999999999888654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=97.99  E-value=4.8e-06  Score=64.11  Aligned_cols=44  Identities=32%  Similarity=0.447  Sum_probs=38.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++++++ |..||...
T Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             CCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            356778999999988888889999999999999999 88888654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.99  E-value=7.4e-06  Score=61.55  Aligned_cols=44  Identities=30%  Similarity=0.493  Sum_probs=38.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR  209 (267)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence            456778999999988888889999999999999999 77787543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=97.98  E-value=7e-06  Score=63.16  Aligned_cols=44  Identities=34%  Similarity=0.575  Sum_probs=38.1

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKH   91 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~   91 (215)
                      .||+.|++||.+.+..++.++|+||+|++++++++ |..||....
T Consensus       208 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            46678999999988888999999999999999998 888886543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.98  E-value=9.2e-07  Score=67.78  Aligned_cols=35  Identities=43%  Similarity=0.715  Sum_probs=20.7

Q ss_pred             ccccCcccccccccccC------CCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKEL------KYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~------~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+.      .++.++|+||+|+.++++
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el  216 (301)
T 3q4u_A          176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV  216 (301)
T ss_dssp             CCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHH
Confidence            34666667777666544      233456666666666666

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.97  E-value=6.5e-06  Score=69.70  Aligned_cols=55  Identities=27%  Similarity=0.361  Sum_probs=42.2

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhh
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      .+++.|++||.+....++.++|+||+|++++|+++ |+.||....  ..++...+...
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~  555 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQG  555 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTT
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcC
Confidence            46688999999998889999999999999999998 888886543  23444444443

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=97.97  E-value=8.5e-06  Score=63.58  Aligned_cols=44  Identities=27%  Similarity=0.514  Sum_probs=37.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+|+.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       210 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  254 (333)
T 1mqb_A          210 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL  254 (333)
T ss_dssp             -CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence            356778999999988888889999999999999998 88888643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=97.97  E-value=7.1e-06  Score=63.48  Aligned_cols=44  Identities=39%  Similarity=0.609  Sum_probs=37.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++++++ |..||...
T Consensus       200 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  244 (322)
T 1p4o_A          200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL  244 (322)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             CCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence            356788999999988888899999999999999999 67777543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.97  E-value=1.4e-06  Score=67.64  Aligned_cols=42  Identities=33%  Similarity=0.371  Sum_probs=38.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++|+.||.
T Consensus       195 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             ccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            458999999999988888889999999999999999999985

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.96  E-value=6e-06  Score=64.23  Aligned_cols=43  Identities=30%  Similarity=0.542  Sum_probs=37.2

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .||+.|++||.+.+..++.++|+||+|++++++++ |..||...
T Consensus       227 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  270 (333)
T 2i1m_A          227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI  270 (333)
T ss_dssp             EECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             CCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence            46678999999988888999999999999999998 77787654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.96  E-value=8.3e-06  Score=61.41  Aligned_cols=43  Identities=28%  Similarity=0.478  Sum_probs=37.2

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .||+.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  209 (268)
T 3sxs_A          166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY  209 (268)
T ss_dssp             CCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc
Confidence            45667999999988888999999999999999998 88888543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=97.96  E-value=4.1e-06  Score=64.00  Aligned_cols=43  Identities=30%  Similarity=0.521  Sum_probs=37.6

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .|++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  224 (291)
T 1xbb_A          181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM  224 (291)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            46678999999988878889999999999999998 88888654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=97.95  E-value=8e-06  Score=66.57  Aligned_cols=55  Identities=22%  Similarity=0.318  Sum_probs=41.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..+++.|++||.+....++.++|+||+|++++++++ |+.||...  ...++...+..
T Consensus       341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--~~~~~~~~i~~  396 (452)
T 1fmk_A          341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--VNREVLDQVER  396 (452)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHT
T ss_pred             CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHc
Confidence            356778999999988889999999999999999999 78888543  22344444443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=97.95  E-value=6.2e-07  Score=69.92  Aligned_cols=35  Identities=34%  Similarity=0.521  Sum_probs=21.7

Q ss_pred             ccccCccccccccccc-------CCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKE-------LKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~-------~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+       ..++.++|+||+|+.++++
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~el  228 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI  228 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHH
Confidence            4567777777777664       2334456666666666666

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=97.95  E-value=7.9e-06  Score=63.49  Aligned_cols=43  Identities=33%  Similarity=0.508  Sum_probs=37.5

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .+++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       202 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  245 (327)
T 1fvr_A          202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM  245 (327)
T ss_dssp             -CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             CCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC
Confidence            56788999999988888889999999999999998 88888654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=97.93  E-value=7.3e-06  Score=69.68  Aligned_cols=56  Identities=25%  Similarity=0.376  Sum_probs=42.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++ |+.||....  ..++...+...
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~  588 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEKG  588 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHTT
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC
Confidence            356778999999998889999999999999999998 888986542  23444444443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=97.93  E-value=7.4e-06  Score=63.86  Aligned_cols=55  Identities=29%  Similarity=0.463  Sum_probs=42.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++++++ |+.||...  ...++...+..
T Consensus       219 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--~~~~~~~~~~~  274 (334)
T 2pvf_A          219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEELFKLLKE  274 (334)
T ss_dssp             CCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHH
T ss_pred             CCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC--CHHHHHHHHhc
Confidence            356678999999988888889999999999999998 88888644  23344444443

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.92  E-value=8.6e-06  Score=64.68  Aligned_cols=43  Identities=33%  Similarity=0.574  Sum_probs=35.1

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .+++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~  254 (373)
T 2qol_A          211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM  254 (373)
T ss_dssp             ---CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred             CcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence            45678999999998889999999999999999987 88888644

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=97.92  E-value=9.1e-06  Score=62.64  Aligned_cols=44  Identities=23%  Similarity=0.431  Sum_probs=36.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..+++.|++||.+....++.++|+||+|++++++++ |..||...
T Consensus       209 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  253 (313)
T 3brb_A          209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV  253 (313)
T ss_dssp             --CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            356778999999988888899999999999999999 77777543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.92  E-value=1.8e-06  Score=66.54  Aligned_cols=26  Identities=4%  Similarity=0.065  Sum_probs=22.9

Q ss_pred             Cccccccchhhhhhhc--cceeeccccc
Q psy18117        189 RILHRGERETFLSVLG--DCVRTVSEQA  214 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~--~~~~ki~D~~  214 (215)
                      .++|+|++|.|||++.  ++.+.|+||+
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~  219 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFG  219 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCT
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCC
Confidence            4799999999999988  5688999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=97.92  E-value=9.6e-06  Score=61.66  Aligned_cols=43  Identities=33%  Similarity=0.523  Sum_probs=37.3

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      .||+.|++||.+....++.++|+||+|++++++++ |..||...
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            46678999999988888999999999999999999 77777543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.92  E-value=2.2e-06  Score=66.66  Aligned_cols=41  Identities=37%  Similarity=0.745  Sum_probs=16.8

Q ss_pred             cCCCCCCChHHH---hhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERL---KELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~---~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+   ....++.++|+||+|++++++++|+.||.
T Consensus       211 ~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  254 (337)
T 3ll6_A          211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE  254 (337)
T ss_dssp             -------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             cCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence            456666666665   23334555666666666666666666664

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.90  E-value=1e-05  Score=61.80  Aligned_cols=40  Identities=40%  Similarity=0.710  Sum_probs=23.6

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      .|++.|++||.+.+..++.++|+||+|++++++++|..|+
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~  217 (295)
T 3ugc_A          178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS  217 (295)
T ss_dssp             TCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             CCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccccc
Confidence            3445566666665555555666666666666666655554

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.90  E-value=1.1e-05  Score=61.07  Aligned_cols=44  Identities=27%  Similarity=0.425  Sum_probs=37.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..|++.|++||.+....++.++|+||+|++++++++ |+.||...
T Consensus       170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  214 (279)
T 1qpc_A          170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM  214 (279)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc
Confidence            346778999999988888889999999999999999 77787543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.90  E-value=8.7e-06  Score=62.85  Aligned_cols=43  Identities=37%  Similarity=0.563  Sum_probs=36.7

Q ss_pred             ccCCCCCCChHHHhhCC---CCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELK---YSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~---~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+....   ++.++|+||+|++++++++|+.||..
T Consensus       203 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             HHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             ccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            56899999999986543   57789999999999999999999853

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.89  E-value=1.1e-05  Score=68.95  Aligned_cols=56  Identities=27%  Similarity=0.423  Sum_probs=41.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      ..||+.|++||.+....++.++|+||+|++++++++ |..||....  ...+...+...
T Consensus       552 ~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--~~~~~~~i~~~  608 (656)
T 2j0j_A          552 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENG  608 (656)
T ss_dssp             --CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHHT
T ss_pred             CCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHcC
Confidence            456788999999988889999999999999999997 777875432  23444444443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.88  E-value=6.3e-06  Score=62.73  Aligned_cols=45  Identities=20%  Similarity=0.390  Sum_probs=37.2

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+ ..++.++|+||+|++++++++|..|++...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~  222 (289)
T 4fvq_A          177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL  222 (289)
T ss_dssp             HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc
Confidence            357889999999876 558888999999999999999766665443

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=97.88  E-value=5.5e-06  Score=65.85  Aligned_cols=42  Identities=36%  Similarity=0.547  Sum_probs=36.0

Q ss_pred             CCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         49 GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        49 gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      +++.|++||.+....++.++|+||+|++++|+++ |..||...
T Consensus       277 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             EEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             CCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            4557999999988888889999999999999998 77787543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.87  E-value=1e-05  Score=64.26  Aligned_cols=42  Identities=31%  Similarity=0.552  Sum_probs=35.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhc-CCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g-~~p~~   88 (215)
                      ..||+.|++||.+....++.++|+||+|+++++++++ ..||.
T Consensus       256 ~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~  298 (373)
T 3c1x_A          256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  298 (373)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             CCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence            4567789999999988899999999999999999995 44554

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.86  E-value=9.9e-06  Score=66.80  Aligned_cols=54  Identities=30%  Similarity=0.476  Sum_probs=41.1

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHh
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      .+++.|++||.+....++.++|+||+|++++|+++ |..||....  ..++...+..
T Consensus       380 ~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~  434 (495)
T 1opk_A          380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEK  434 (495)
T ss_dssp             CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHT
T ss_pred             cCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc
Confidence            45668999999988888889999999999999998 777875432  2344444443

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=97.82  E-value=3.8e-06  Score=65.13  Aligned_cols=41  Identities=37%  Similarity=0.679  Sum_probs=26.2

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+.+..++.++|+||+|++++++++|+.||.
T Consensus       198 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~  238 (318)
T 3lxp_A          198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ  238 (318)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence            45566666666666555566666666666666666666654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=97.82  E-value=9.3e-06  Score=63.15  Aligned_cols=40  Identities=33%  Similarity=0.482  Sum_probs=33.7

Q ss_pred             cccCCCCCCChHHHhhCCCCCC------ccchhhHHHHHHHHhcCC
Q psy18117         46 SFLGTPYYMSPERLKELKYSFP------SDVWSLGCVLYEMVALQS   85 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~------~diws~g~~l~e~~~g~~   85 (215)
                      +..||+.|++||.+.+......      +|+||+|++++++++|..
T Consensus       205 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~  250 (337)
T 3mdy_A          205 TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV  250 (337)
T ss_dssp             SSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred             CCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccC
Confidence            3579999999999987666655      899999999999999943

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.80  E-value=1.8e-05  Score=65.94  Aligned_cols=44  Identities=25%  Similarity=0.375  Sum_probs=38.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~   90 (215)
                      ..++..|++||.+....++.++|+||+|++++|+++ |+.||...
T Consensus       424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~  468 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM  468 (535)
T ss_dssp             TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred             CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            356678999999988889999999999999999999 78888543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.80  E-value=3.9e-06  Score=64.49  Aligned_cols=43  Identities=33%  Similarity=0.546  Sum_probs=34.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+ .++.++|+||+|++++++++|..||...
T Consensus       195 ~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             CCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             cCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence            468888899987754 4677889999999999999998888643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.80  E-value=1.4e-05  Score=61.17  Aligned_cols=44  Identities=30%  Similarity=0.533  Sum_probs=37.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..||+.|++||.+.+..++.++|+||+|+++++++++..|++..
T Consensus       192 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~  235 (298)
T 3f66_A          192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  235 (298)
T ss_dssp             CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            46778899999998888899999999999999999966555443

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.79  E-value=8.4e-06  Score=61.77  Aligned_cols=43  Identities=33%  Similarity=0.547  Sum_probs=38.1

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|+++++++++..|+..
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~  223 (284)
T 2a19_B          181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE  223 (284)
T ss_dssp             CCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH
T ss_pred             cCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh
Confidence            4688999999999888888999999999999999999887753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	215
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-13
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-13
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-13
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	7e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-06
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-13
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-07
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-08
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-12
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-10
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-11
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-11
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-08
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-11
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-08
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-07
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-08
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-08
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-09
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-05
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-07
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-09
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-07
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	7e-09
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	9e-06
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-07
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-04
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.002

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             LHHP ++ L  AF      E+ L+LE    G+L   I     +   ++E  V +Y RQ
Sbjct: 81  NQLHHPKLINLHDAF--EDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQ 135

Query: 178 IAAALQYVHSRRILHR 193
               L+++H   I+H 
Sbjct: 136 ACEGLKHMHEHSIVHL 151

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
            T  + +PE +      F +D+W++G + Y +++  SPF  +        + ++   +  
Sbjct: 190 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEF 247

Query: 109 LP 110
             
Sbjct: 248 DE 249

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.5 bits (128), Expect = 3e-09
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFPS 68
            T  + +PE +      F +D+W++G + Y + S    F G     + + +K   + F  
Sbjct: 190 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 249

Query: 69  DVWS 72
           D +S
Sbjct: 250 DAFS 253

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (170), Expect = 4e-15
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNIV        R+   L++V+E  + GDLA VI +  +++ +L E  V     Q
Sbjct: 58  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 117

Query: 178 IAAALQYVHSR-----RILHR 193
           +  AL+  H R      +LHR
Sbjct: 118 LTLALKECHRRSDGGHTVLHR 138

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 5e-14
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ AL  PF +   S   L  +I    
Sbjct: 173 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGK 230

Query: 106 FPPLPSGV 113
           F  +P   
Sbjct: 231 FRRIPYRY 238

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (129), Expect = 2e-09
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
           TS   +F+GTPYYMSPE++  + Y+  SD+WSLGC+LYE+ +    F          +++
Sbjct: 168 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 227

Query: 61  ELKYSFPSDVWS 72
           E K+      +S
Sbjct: 228 EGKFRRIPYRYS 239

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 9e-14
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GTP +M+PE  +E KY    DV++ G  + EM   + P+     +   + +R+   +
Sbjct: 172 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-NAAQIYRRVTSGV 229

Query: 106 FPPLPSGVLYSD 117
            P     V   +
Sbjct: 230 KPASFDKVAIPE 241

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 6e-10
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYE 43
            + S   + +GTP +M+PE  +E KY    DV++ G  + E
Sbjct: 165 KRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLE 204

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 5e-09
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 118 KTLHHPNIVELRSAFAS--RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           K L HPNIV    ++ S  +  + + LV EL   G L   +    ++   +   ++ S+ 
Sbjct: 63  KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL----KRFKVMKIKVLRSWC 118

Query: 176 RQIAAALQYVHSR--RILHR 193
           RQI   LQ++H+R   I+HR
Sbjct: 119 RQILKGLQFLHTRTPPIIHR 138

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 9e-14
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 118 KTLHHPNIVELRSAF--ASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
           +    P+IV +   +       + L +V+E  D G+L   I +   +     E       
Sbjct: 60  RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA--FTEREASEIM 117

Query: 176 RQIAAALQYVHSRRILHR 193
           + I  A+QY+HS  I HR
Sbjct: 118 KSIGEAIQYLHSINIAHR 135

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 3e-10
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS--LNGLCKRIEM 103
           +   TPYY++PE L   KY    D+WSLG ++Y ++    PF+S H      G+  RI M
Sbjct: 172 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM 231

Query: 104 ALFPP 108
             +  
Sbjct: 232 GQYEF 236

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 3e-08
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 12/79 (15%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP------- 56
             +S+ +   TPYY++PE L   KY    D+WSLG ++Y +    G P + S        
Sbjct: 166 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC--GYPPFYSNHGLAISP 223

Query: 57  ---ERLKELKYSFPSDVWS 72
               R++  +Y FP+  WS
Sbjct: 224 GMKTRIRMGQYEFPNPEWS 242

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 1e-13
 Identities = 25/88 (28%), Positives = 35/88 (39%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           SF+GT  YMSPERL+   YS  SD+WS+G  L EM   + P          L    ++  
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221

Query: 106 FPPLPSGVLYSDKTLHHPNIVELRSAFA 133
                     +         ++ R   A
Sbjct: 222 DAAETPPRPRTPGRPLSSYGMDSRPPMA 249

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 7e-13
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
              + P IV    AF   S  E+ + +E  D G L  V+    +K   + E ++      
Sbjct: 59  HECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA 112

Query: 178 IAAALQYVHSR-RILHR 193
           +   L Y+  + +I+HR
Sbjct: 113 VIKGLTYLREKHKIMHR 129

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 7e-11
 Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPE 57
            +  S  +SF+GT  YMSPERL+   YS  SD+WS+G  L E+                 
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213

Query: 58  RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPSGVL 114
                     ++           ++         +++  L   I     P LPSGV 
Sbjct: 214 MFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP +V L  AF      E+ ++ E    G+L   +A+   K   ++E     Y RQ
Sbjct: 78  SVLRHPTLVNLHDAF--EDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQ 132

Query: 178 IAAALQYVHSRRILHR 193
           +   L ++H    +H 
Sbjct: 133 VCKGLCHMHENNYVHL 148

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 57.8 bits (139), Expect = 9e-11
 Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
              GT  + +PE  +     + +D+WS+G + Y +++  SPF  +  + +   + ++   
Sbjct: 184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE--NDDETLRNVKSCD 241

Query: 106 FPPLPS 111
           +    S
Sbjct: 242 WNMDDS 247

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 52.4 bits (125), Expect = 7e-09
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
             SV    GT  + +PE  +     + +D+WS+G + Y + S    F G     +   +K
Sbjct: 179 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 238

Query: 61  ELKYSFPSDVWS 72
              ++     +S
Sbjct: 239 SCDWNMDDSAFS 250

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            +  HPNIV+L  AF       L++++E    G +  V+    + +  L E  +    +Q
Sbjct: 64  ASCDHPNIVKLLDAF--YYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQ 118

Query: 178 IAAALQYVHSRRILHR 193
              AL Y+H  +I+HR
Sbjct: 119 TLDALNYLHDNKIIHR 134

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 45  DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCK 99
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L EM  ++ P     ++   +  
Sbjct: 168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--HELNPMRVLL 225

Query: 100 RIEMALFPPLPSGVLYSD 117
           +I  +  P L     +S 
Sbjct: 226 KIAKSEPPTLAQPSRWSS 243

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 1e-06
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 9   DSFLGTPYYMSPERL-----KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
           DSF+GTPY+M+PE +     K+  Y + +DVWSLG  L E+      P +     ++ L 
Sbjct: 168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM--AEIEPPHHELNPMRVLL 225

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 2e-13
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           D+      + +PE L+E K+S  SDVWS G +L+E+ +     +   I L  +  R+E  
Sbjct: 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKG 216

Query: 105 LFPPLPSGV 113
                P G 
Sbjct: 217 YKMDAPDGC 225

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 6e-12
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L H N+V+L        G  L++V E   +G L   +    + +  L    +  +   
Sbjct: 55  TQLRHSNLVQLLGVIVEEKGG-LYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLD 111

Query: 178 IAAALQYVHSRRILHR 193
           +  A++Y+     +HR
Sbjct: 112 VCEAMEYLEGNNFVHR 127

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER------ 58
           +S+ D+      + +PE L+E K+S  SDVWS G +L+E+ SF   PY   P +      
Sbjct: 154 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 213

Query: 59  LKELKYSFPSDV 70
            K  K   P   
Sbjct: 214 EKGYKMDAPDGC 225

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 4e-13
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 25  ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQ 84
            +K +       +     +  + +GTPY+M+PE +    Y    D+WSLG +  EM+  +
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Query: 85  SPFFSKHISLNGLCKRIEMALFPPLPS 111
            P+ +++         I     P L +
Sbjct: 214 PPYLNENPL--RALYLIATNGTPELQN 238

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   +PNIV    ++    G EL++V+E    G L  V+ E         E  + +  R+
Sbjct: 72  RENKNPNIVNYLDSY--LVGDELWVVMEYLAGGSLTDVVTETCMD-----EGQIAAVCRE 124

Query: 178 IAAALQYVHSRRILHR 193
              AL+++HS +++HR
Sbjct: 125 CLQALEFLHSNQVIHR 140

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 1e-09
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
           ++ + S   + +GTPY+M+PE +    Y    D+WSLG +  E+    G P Y++   L+
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPLR 223

Query: 61  ELK 63
            L 
Sbjct: 224 ALY 226

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 1e-12
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L +P IV L         + L LV+E+A  G L   +     K+  +    V     Q
Sbjct: 64  HQLDNPYIVRLIGVC---QAEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQ 117

Query: 178 IAAALQYVHSRRILHR 193
           ++  ++Y+  +  +HR
Sbjct: 118 VSMGMKYLEEKNFVHR 133

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +      + +PE +   K+S  SDVWS G  ++E ++     + K +    +   IE   
Sbjct: 171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY-KKMKGPEVMAFIEQGK 229

Query: 106 FPPLPSGV 113
               P   
Sbjct: 230 RMECPPEC 237

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 6e-07
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           +      + +PE +   K+S  SDVWS G  ++E  S+   PY  M    +   
Sbjct: 171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 224

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.5 bits (154), Expect = 1e-12
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPN ++ R  +        +LV+E        L        K  L E  + +    
Sbjct: 70  QKLRHPNTIQYRGCY--LREHTAWLVMEYCLGSASDL----LEVHKKPLQEVEIAAVTHG 123

Query: 178 IAAALQYVHSRRILHR 193
               L Y+HS  ++HR
Sbjct: 124 ALQGLAYLHSHNMIHR 139

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.2 bits (148), Expect = 6e-12
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 37  LGCVLYEVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
              ++   +SF+GTPY+M+PE +  +   +Y    DVWSLG    E+   + P F  +++
Sbjct: 161 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMN 218

Query: 94  LNGLCKRIEMALFPPLPSGVL 114
                  I     P L SG  
Sbjct: 219 AMSALYHIAQNESPALQSGHW 239

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 26/115 (22%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
            +   +  +SF+GTPY+M+PE +  +   +Y    DVWSLG    E+      P   +  
Sbjct: 161 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMN 218

Query: 58  RLKELKY-------SFPSDVWSLGC--VLYEMV------------ALQSPFFSKH 91
            +  L +       +  S  WS      +   +             L+  F  + 
Sbjct: 219 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 1e-12
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +  GT  Y+ PE ++   +    D+WSLG + YE +  + PF +   +     KRI   +
Sbjct: 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN--TYQETYKRI-SRV 219

Query: 106 FPPLPSGV 113
               P  V
Sbjct: 220 EFTFPDFV 227

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 2e-12
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 17/109 (15%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPE 57
              +S   +  GT  Y+ PE ++   +    D+WSLG + YE       F    Y  + +
Sbjct: 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 214

Query: 58  RLKELKYSFPSDVWSLGC-VLYEMV------------ALQSPFFSKHIS 93
           R+  ++++FP  V      ++  ++             L+ P+ + + S
Sbjct: 215 RISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 263

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 2e-11
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HPNI+ L   F       ++L+LE A  G +   + +         E    +Y  +
Sbjct: 61  SHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITE 114

Query: 178 IAAALQYVHSRRILHR 193
           +A AL Y HS+R++HR
Sbjct: 115 LANALSYCHSKRVIHR 130

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 2e-12
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+H N+V+       R G   +L LE    G+L   I    +    + E     +F Q
Sbjct: 58  KMLNHENVVKFYGHR--REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQ 111

Query: 178 IAAALQYVHSRRILHR 193
           + A + Y+H   I HR
Sbjct: 112 LMAGVVYLHGIGITHR 127

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 46  SFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
              GT  Y++PE LK  ++ + P DVWS G VL  M+A + P+     S        E  
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223

Query: 105 LFPPLPSGV 113
            +      +
Sbjct: 224 TYLNPWKKI 232

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 3e-09
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 25/112 (22%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKEL 62
           +   ++   GT  Y++PE LK  ++ + P DVWS G VL  +    G   +  P    + 
Sbjct: 158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM--LAGELPWDQPSDSCQE 215

Query: 63  ------KYSFPSDVWSLGCVLYEMV----------------ALQSPFFSKHI 92
                 K ++ +    +      ++                  +  +++K +
Sbjct: 216 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 267

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.4 bits (151), Expect = 2e-12
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             + HPNIV L   +   SG  L+L+++L   G+L   I     +K    E        Q
Sbjct: 62  HKIKHPNIVALDDIY--ESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRLIFQ 115

Query: 178 IAAALQYVHSRRILHRGERETFLSVLGD 205
           +  A++Y+H   I+HR  +   L     
Sbjct: 116 VLDAVKYLHDLGIVHRDLKPENLLYYSL 143

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +  GTP Y++PE L +  YS   D WS+G + Y ++    PF+ ++ +   L ++I  A 
Sbjct: 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQILKAE 225

Query: 106 FPPLP 110
           +    
Sbjct: 226 YEFDS 230

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.6 bits (136), Expect = 2e-10
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 24/121 (19%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
           +  GTP Y++PE L +  YS   D WS+G + Y +      F         E++ + +Y 
Sbjct: 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 227

Query: 66  FPSDVW-----SLGCVLYEMV------------ALQSPFFSKHISLNGLCKRIEMALFPP 108
           F S  W     S    +  ++            ALQ P+ +   +L+   K I  ++   
Sbjct: 228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD---KNIHQSVSEQ 284

Query: 109 L 109
           +
Sbjct: 285 I 285

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            T   P IV +  AF   +  +L  +L+L + GDL   +     +    +E  +  Y  +
Sbjct: 62  STGDCPFIVCMSYAF--HTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAE 115

Query: 178 IAAALQYVHSRRILHRG 194
           I   L+++H+R +++R 
Sbjct: 116 IILGLEHMHNRFVVYRD 132

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.7 bits (118), Expect = 7e-08
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 49  GTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
           GT  YM+PE L K + Y   +D +SLGC+L++++   SPF            R+ + +  
Sbjct: 167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 226

Query: 108 PLPSGV 113
            LP   
Sbjct: 227 ELPDSF 232

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 13  GTPYYMSPERL-KELKYSFPSDVWSLGCVLYE 43
           GT  YM+PE L K + Y   +D +SLGC+L++
Sbjct: 167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 198

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 3e-12
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP  V+L   F  +  ++L+  L  A  G+L   I +         E     Y  +
Sbjct: 63  SRLDHPFFVKLYFTF--QDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAE 116

Query: 178 IAAALQYVHSRRILHR 193
           I +AL+Y+H + I+HR
Sbjct: 117 IVSALEYLHGKGIIHR 132

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 32  SDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           + V S        +SF+GT  Y+SPE L E      SD+W+LGC++Y++VA   PF +  
Sbjct: 155 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG- 213

Query: 92  ISLNGLCKRIEMALFPPLPSGV 113
            +   + ++I + L    P   
Sbjct: 214 -NEYLIFQKI-IKLEYDFPEKF 233

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERL 59
           K +  +SF+GT  Y+SPE L E      SD+W+LGC++Y++ +    F     Y+  +++
Sbjct: 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI 222

Query: 60  KELKYSFPSDVWS 72
            +L+Y FP   + 
Sbjct: 223 IKLEYDFPEKFFP 235

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 4e-12
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQE----LFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           + L H NIV LR  F S   ++    L LVL+   +    +      + K  L    V  
Sbjct: 68  RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKL 126

Query: 174 YFRQIAAALQYVHSRRILHR 193
           Y  Q+  +L Y+HS  I HR
Sbjct: 127 YMYQLFRSLAYIHSFGICHR 146

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 50  TPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
             Y           Y+   DVWS GCVL E++  Q  F     S       I   L  P 
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTPT 243

Query: 110 P 110
            
Sbjct: 244 R 244

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 3   VKTSSVDSFLGTPYYMSP-ERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE 61
           V+     S++ + YY +P        Y+   DVWS GCVL E+   LG P +     + +
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL--LLGQPIFPGDSGVDQ 231

Query: 62  LKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPS 111
           L          LG    E +   +P +++                P  P 
Sbjct: 232 LVEII----KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 6e-12
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  + +PE +   K+S  SDVWS G +++E  +     + + +  + +   +E   
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLEKGE 227

Query: 106 FPPLPSGV 113
               P+G 
Sbjct: 228 RMGCPAGC 235

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 3e-10
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L +P IV +         +   LV+E+A+ G L     +  Q+  H+ +  +     Q
Sbjct: 63  QQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLN----KYLQQNRHVKDKNIIELVHQ 115

Query: 178 IAAALQYVHSRRILHR 193
           ++  ++Y+     +HR
Sbjct: 116 VSMGMKYLEESNFVHR 131

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-09
 Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL- 62
             +         + +PE +   K+S  SDVWS G +++E  S+   PY  M    +  + 
Sbjct: 164 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223

Query: 63  ----KYSFPSDV 70
               +   P+  
Sbjct: 224 EKGERMGCPAGC 235

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 9e-12
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 42  YEVDSFLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLC 98
           ++ +   G+  +M+PE ++   +  YSF SDV++ G VLYE++  Q P+ + +     + 
Sbjct: 161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220

Query: 99  KRIEMALFPPLPS 111
                 L P L  
Sbjct: 221 MVGRGYLSPDLSK 233

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   H NI+         +  +L +V +  +   L   +      +       +    RQ
Sbjct: 59  RKTRHVNILLF---MGYSTAPQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQ 112

Query: 178 IAAALQYVHSRRILHR 193
            A  + Y+H++ I+HR
Sbjct: 113 TAQGMDYLHAKSIIHR 128

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 5   TSSVDSFLGTPYYMSPERLK---ELKYSFPSDVWSLGCVLYEV 44
           +   +   G+  +M+PE ++   +  YSF SDV++ G VLYE+
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               H NI+ L  +F   S +EL ++ E     D+   I         L E  + SY  Q
Sbjct: 56  NIARHRNILHLHESF--ESMEELVMIFEFISGLDIFERI---NTSAFELNEREIVSYVHQ 110

Query: 178 IAAALQYVHSRRILHR 193
           +  ALQ++HS  I H 
Sbjct: 111 VCEALQFLHSHNIGHF 126

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 3e-10
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                P Y +PE  +    S  +D+WSLG ++Y +++  +PF ++  +   + + I  A 
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE--TNQQIIENIMNAE 219

Query: 106 FPPLPS 111
           +     
Sbjct: 220 YTFDEE 225

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 27/128 (21%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
             +       P Y +PE  +    S  +D+WSLG ++Y + S    FL        E + 
Sbjct: 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216

Query: 61  ELKYSFPSDVWS-LGCVLYEMV----------------ALQSPFFSKHISLNGLCKRIEM 103
             +Y+F  + +  +     + V                ALQ P+  + I      +R+  
Sbjct: 217 NAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI------ERVST 270

Query: 104 ALFPPLPS 111
            +   L  
Sbjct: 271 KVIRTLKH 278

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H  +V L +     + + ++++ E  + G L   +         L    +     Q
Sbjct: 63  KQLQHQRLVRLYAVV---TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 117

Query: 178 IAAALQYVHSRRILHR 193
           IA  + ++  R  +HR
Sbjct: 118 IAEGMAFIEERNYIHR 133

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-09
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               + +PE +    ++  SDVWS G +L E+V      +   ++   + + +E      
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP-GMTNPEVIQNLERGYRMV 230

Query: 109 LPSGV 113
            P   
Sbjct: 231 RPDNC 235

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 7e-06
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
           + ++ +       + +PE +    ++  SDVWS G +L E+ +    PY     
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 3e-11
 Identities = 13/68 (19%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  + +PE     +++  SDVWS G +L E+       +   +    +  ++E   
Sbjct: 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP-GMVNREVLDQVERGY 231

Query: 106 FPPLPSGV 113
             P P   
Sbjct: 232 RMPCPPEC 239

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 5e-08
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H  +V+L +     S + +++V E   +G L   +     K   L +  +     Q
Sbjct: 67  KKLRHEKLVQLYAVV---SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQ 121

Query: 178 IAAALQYVHSRRILHR 193
           IA+ + YV     +HR
Sbjct: 122 IASGMAYVERMNYVHR 137

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 7e-08
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER----- 58
           + ++         + +PE     +++  SDVWS G +L E+ +    PY     R     
Sbjct: 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ 226

Query: 59  -LKELKYSFPSDV 70
             +  +   P + 
Sbjct: 227 VERGYRMPCPPEC 239

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.0 bits (142), Expect = 3e-11
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           + +GT  Y+SPE+ +       SDV+SLGCVLYE++  + PF      ++   + +    
Sbjct: 173 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-PVSVAYQHVREDP 231

Query: 106 FPPLPSGVLYSD 117
            PP       S 
Sbjct: 232 IPPSARHEGLSA 243

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.1 bits (137), Expect = 2e-10
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 118 KTLHHPNIVELRSAFASRS--GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYF 175
             L+HP IV +     + +  G   ++V+E  D   L  ++         +         
Sbjct: 62  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVI 117

Query: 176 RQIAAALQYVHSRRILHR 193
                AL + H   I+HR
Sbjct: 118 ADACQALNFSHQNGIIHR 135

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 50.9 bits (121), Expect = 2e-08
 Identities = 18/35 (51%), Positives = 24/35 (68%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV 44
           + +GT  Y+SPE+ +       SDV+SLGCVLYEV
Sbjct: 173 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 207

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 3e-11
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  +M+ E L+  K++  SDVWS G +L+E++   +P +   ++   +   +    
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITVYLLQGR 251

Query: 106 FPPLPSGV 113
               P   
Sbjct: 252 RLLQPEYC 259

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 2e-07
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
              +         +M+ E L+  K++  SDVWS G +L+E+ +    PY 
Sbjct: 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K   HPN++ L        G    +VL     GDL       R +  +     +  +  Q
Sbjct: 83  KDFSHPNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNF---IRNETHNPTVKDLIGFGLQ 138

Query: 178 IAAALQYVHSRRILHR 193
           +A  ++++ S++ +HR
Sbjct: 139 VAKGMKFLASKKFVHR 154

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 5e-11
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  +  PE L   K+S  SD+W+ G +++E+ +L    +    + +   + I   L
Sbjct: 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGL 218

Query: 106 FPPLPSGV 113
               P   
Sbjct: 219 RLYRPHLA 226

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L H  +V+L         + +F++ E    G L   +   R+ +       +    + 
Sbjct: 54  MNLSHEKLVQLYGVC--TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKD 108

Query: 178 IAAALQYVHSRRILHR 193
           +  A++Y+ S++ LHR
Sbjct: 109 VCEAMEYLESKQFLHR 124

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 9e-09
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           + +S         +  PE L   K+S  SD+W+ G +++E+ S    PY   +     E 
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH 213

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 6e-11
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 2/103 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHI--SLNGLCKRIEM 103
           S + T +Y +PE L +  Y+ P D+WS+GC+  EM   +  F        L  +   I +
Sbjct: 174 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 233

Query: 104 ALFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLEL 146
                 P  V    +  H  +   +             L+L+ 
Sbjct: 234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC 276

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 9e-08
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
           S + T +Y +PE L +  Y+ P D+WS+GC+  E+  F   P +     + +L 
Sbjct: 174 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM--FRRKPLFRGSSDVDQLG 225

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 1e-07
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
           +T  HPN+V L              L LV E  DQ     +    +  +  +    +   
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGVPTETIKDM 121

Query: 175 FRQIAAALQYVHSRRILHR 193
             Q+   L ++HS R++HR
Sbjct: 122 MFQLLRGLDFLHSHRVVHR 140

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 6e-11
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +F GTP Y++PE L   KY+   D WS G +LYEM+  QSPF  +      L   I M  
Sbjct: 162 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ--DEEELFHSIRMD- 218

Query: 106 FPPLPSGV 113
            P  P  +
Sbjct: 219 NPFYPRWL 226

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 4e-10
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               HP +  +   F  ++ + LF V+E  + GDL   I    Q            Y  +
Sbjct: 58  LAWEHPFLTHMFCTF--QTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAE 111

Query: 178 IAAALQYVHSRRILHR 193
           I   LQ++HS+ I++R
Sbjct: 112 IILGLQFLHSKGIVYR 127

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 3e-08
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLK 60
             +  +  ++F GTP Y++PE L   KY+   D WS G +LYE+   +G   +   +  +
Sbjct: 153 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM--LIGQSPFHGQDEEE 210

Query: 61  ELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS 93
                           L+  + + +PF+ + + 
Sbjct: 211 ----------------LFHSIRMDNPFYPRWLE 227

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.3 bits (140), Expect = 6e-11
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
           +  GT  YMS       + S   D+ +LG V    +    P+
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 213

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 55.2 bits (132), Expect = 8e-10
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP-------ERLKEL 62
           +  GT  YMS       + S   D+ +LG V             +         ER+ E 
Sbjct: 172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 231

Query: 63  KYSFPSDVWSLGC 75
           K S P      G 
Sbjct: 232 KQSTPLRELCAGF 244

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
               I  +      + G    LV++L       L            +   V    +Q+ A
Sbjct: 59  GCTGIPNVYYFG--QEGLHNVLVIDLLGPSLEDL----LDLCGRKFSVKTVAMAAKQMLA 112

Query: 181 ALQYVHSRRILHR 193
            +Q +H + +++R
Sbjct: 113 RVQSIHEKSLVYR 125

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 7e-11
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 16/87 (18%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH--------------L 166
           +H NIV L  A     G    ++ E    GDL   +   R                   L
Sbjct: 85  NHMNIVNLLGAC--TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 167 AECLVWSYFRQIAAALQYVHSRRILHR 193
               + S+  Q+A  + ++ S+  +HR
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHR 169

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               +M+PE +    Y+F SDVWS G  L+E+ +L S  +      +   K I+      
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268

Query: 109 LPSGV 113
            P   
Sbjct: 269 SPEHA 273

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
               +M+PE +    Y+F SDVWS G  L+E+ S LG+  Y       +  
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS-LGSSPYPGMPVDSKFY 258

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 1e-10
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 42  YEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
           Y  +       +M+ E +    Y+  SDVWS G  ++E++   S  +      + +   +
Sbjct: 168 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSIL 226

Query: 102 EMALFPPLPSGV 113
           E     P P   
Sbjct: 227 EKGERLPQPPIC 238

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 6e-08
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
           K    +       +M+ E +    Y+  SDVWS G  ++E+ +F   PY  +    +  +
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI 225

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            ++ +P++  L     +     + L+ +L   G L   +   R+ K ++    + ++  Q
Sbjct: 66  ASVDNPHVCRLLGICLT---STVQLITQLMPFGCL---LDYVREHKDNIGSQYLLNWCVQ 119

Query: 178 IAAALQYVHSRRILHR 193
           IA  + Y+  RR++HR
Sbjct: 120 IAKGMNYLEDRRLVHR 135

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 2e-10
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  + SPE     +YS  SDVWS G +++E+ +     +  + S + + + I    
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGF 219

Query: 106 FPPLPSGV 113
               P   
Sbjct: 220 RLYKPRLA 227

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             L HP +V+L           + LV E  + G L+      R ++   A   +      
Sbjct: 55  MKLSHPKLVQLYGVC--LEQAPICLVFEFMEHGCLSDY---LRTQRGLFAAETLLGMCLD 109

Query: 178 IAAALQYVHSRRILHR 193
           +   + Y+    ++HR
Sbjct: 110 VCEGMAYLEEACVIHR 125

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 6e-08
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
           + +S         + SPE     +YS  SDVWS G +++EV S    PY     
Sbjct: 155 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV----DSFLGTPYYMSPERLK 60
            +   +  GTP +++PE +        +D+WS+G + Y +      FLG     +   + 
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 229

Query: 61  ELKYSFPSDVWS 72
            + Y F  + +S
Sbjct: 230 AVNYEFEDEYFS 241

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           GTP +++PE +        +D+WS+G + Y +++  SPF    
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 220

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 8e-09
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN++ L   +   +  ++ L+LEL   G+L     +   +K  L E     + +Q
Sbjct: 68  KEIQHPNVITLHEVY--ENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQ 121

Query: 178 IAAALQYVHSRRILHR 193
           I   + Y+HS +I H 
Sbjct: 122 ILNGVYYLHSLQIAHF 137

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               +M+PE L +  Y+  SDVWS G +L+E+  L    +   + +  L K ++      
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP-GVPVEELFKLLKEGHRMD 257

Query: 109 LPSGV 113
            PS  
Sbjct: 258 KPSNC 262

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 3e-08
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 14/88 (15%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCH 165
               H NI+ L  A        L++++E A +G+L   +   R              +  
Sbjct: 74  MIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 166 LAECLVWSYFRQIAAALQYVHSRRILHR 193
           L+   + S   Q+A  ++Y+ S++ +HR
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHR 159

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 1e-07
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER 58
               +M+PE L +  Y+  SDVWS G +L+E+ +  G+PY   P  
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 244

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 55.8 bits (134), Expect = 4e-10
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
            HPNI++L+  +   +    FLV +L  +G+L   +     +K  L+E       R +  
Sbjct: 68  GHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLE 121

Query: 181 ALQYVHSRRILHR 193
            +  +H   I+HR
Sbjct: 122 VICALHKLNIVHR 134

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 46  SFLGTPYYMSPERL------KELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
              GTP Y++PE +          Y    D+WS G ++Y ++A   PF+ + 
Sbjct: 168 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 219

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 27/116 (23%)

Query: 4   KTSSVDSFLGTPYYMSPERL------KELKYSFPSDVWSLGCVLYEVDS----FLGTPYY 53
               +    GTP Y++PE +          Y    D+WS G ++Y + +    F      
Sbjct: 162 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM 221

Query: 54  MSPERLKELKYSFPSDVW-SLGCVLYEMV----------------ALQSPFFSKHI 92
           +    +    Y F S  W      + ++V                AL  PFF +++
Sbjct: 222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 277

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 4e-10
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 21/95 (22%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--------------- 162
           +   H NIV L  A        ++L+ E    GDL   +   R+K               
Sbjct: 96  QLGSHENIVNLLGAC--TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153

Query: 163 ----KCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
                  L    +  +  Q+A  ++++  +  +HR
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 188

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 3e-09
 Identities = 18/68 (26%), Positives = 28/68 (41%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +      +M+PE L E  Y+  SDVWS G +L+E+ +L    +          K I+   
Sbjct: 225 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF 284

Query: 106 FPPLPSGV 113
               P   
Sbjct: 285 KMDQPFYA 292

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER 58
                 +      +M+PE L E  Y+  SDVWS G +L+E+ S    PY   P  
Sbjct: 219 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 4e-10
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               + +PE +   K++  SDVWS G V++E++      + +  S + + K I      P
Sbjct: 175 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLP 233

Query: 109 LPSGV 113
            P   
Sbjct: 234 TPMDC 238

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
            T +         + +PE +   K++  SDVWS G V++EV ++   PY+    
Sbjct: 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 219

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               H NI+ L         + + ++ E  + G    +    R+K    +   +    R 
Sbjct: 64  GQFSHHNIIRLEGVI--SKYKPMMIITEYMENGA---LDKFLREKDGEFSVLQLVGMLRG 118

Query: 178 IAAALQYVHSRRILHR 193
           IAA ++Y+ +   +HR
Sbjct: 119 IAAGMKYLANMNYVHR 134

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 8e-10
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
           +      +M PE +   +Y+  SDVW+ G VL+E+ +     +   ++   +   +    
Sbjct: 201 NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY-GMAHEEVIYYVRDGN 259

Query: 106 FPPLPSGV 113
               P   
Sbjct: 260 ILACPENC 267

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 4   KTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
              +  +      +M PE +   +Y+  SDVW+ G VL+E+ S+   PYY M+ E +   
Sbjct: 195 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 254

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 22/96 (22%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK--------------- 162
               +PNIV  +       G+ + L+ E    GDL   +                     
Sbjct: 71  AEFDNPNIV--KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 128

Query: 163 -----KCHLAECLVWSYFRQIAAALQYVHSRRILHR 193
                   L+        RQ+AA + Y+  R+ +HR
Sbjct: 129 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 164

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHIS--LNGLCKRIEM 103
           +  GT  Y S      ++ S   D+ SLG VL        P+     +       +  E 
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 231

Query: 104 ALFPPLP 110
            +  P+ 
Sbjct: 232 KMSTPIE 238

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 4e-09
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP---------ERLK 60
           +  GT  Y S      ++ S   D+ SLG VL      LG+  +            ER+ 
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF--NLGSLPWQGLKAATKRQKYERIS 229

Query: 61  ELKYSFPSDVWSLGC 75
           E K S P +V   G 
Sbjct: 230 EKKMSTPIEVLCKGY 244

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.8 bits (118), Expect = 4e-08
 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K +     +       +  G    +V+EL       L            +   V     Q
Sbjct: 57  KMMQGGVGIPTIRWCGA-EGDYNVMVMELLGPSLEDL----FNFCSRKFSLKTVLLLADQ 111

Query: 178 IAAALQYVHSRRILHR 193
           + + ++Y+HS+  +HR
Sbjct: 112 MISRIEYIHSKNFIHR 127

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  +M+ E L    Y+  SDVWS G +L+E+V+L    +   ++   L +++    
Sbjct: 185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY-CGMTCAELYEKLPQGY 243

Query: 106 FPPLPSGV 113
               P   
Sbjct: 244 RLEKPLNC 251

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVI------------AECRQKKCH 165
           K  HHPNI+ L  A        L+L +E A  G+L   +            A        
Sbjct: 66  KLGHHPNIINLLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 123

Query: 166 LAECLVWSYFRQIAAALQYVHSRRILHR 193
           L+   +  +   +A  + Y+  ++ +HR
Sbjct: 124 LSSQQLLHFAADVARGMDYLSQKQFIHR 151

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 5e-07
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKE 61
                  +M+ E L    Y+  SDVWS G +L+E+ S  GTPY  M+   L E
Sbjct: 185 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 237

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
               HPN++ L           + ++ E  + G L       RQ         +    R 
Sbjct: 82  GQFDHPNVIHLEGVV--TKSTPVMIITEFMENGSLDSF---LRQNDGQFTVIQLVGMLRG 136

Query: 178 IAAALQYVHSRRILHR 193
           IAA ++Y+     +HR
Sbjct: 137 IAAGMKYLADMNYVHR 152

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               + +PE ++  K++  SDVWS G V++E+++     +   ++   +   IE     P
Sbjct: 195 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW-DMTNQDVINAIEQDYRLP 253

Query: 109 LPSGV 113
            P   
Sbjct: 254 PPMDC 258

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
            +S         + +PE ++  K++  SDVWS G V++EV S+   PY+ M+ + +   
Sbjct: 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 245

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-09
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 46  SFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVALQSPFFSKHISLNG 96
            F GT  Y  PE ++  +Y    + VWSLG +LY+MV    PF      + G
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 8e-09
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 3   VKTSSVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE 61
           +K +    F GT  Y  PE ++  +Y    + VWSLG +LY++    G   +   E +  
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM--VCGDIPFEHDEEIIR 218

Query: 62  LKYSFPSDV 70
            +  F   V
Sbjct: 219 GQVFFRQRV 227

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
               ++ L   F         L+LE  +             ++  L E L  S+F Q+  
Sbjct: 67  GFSGVIRLLDWF--ERPDSFVLILERPEPVQDLFDF---ITERGALQEELARSFFWQVLE 121

Query: 181 ALQYVHSRRILHR 193
           A+++ H+  +LHR
Sbjct: 122 AVRHCHNCGVLHR 134

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 3e-09
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
            +L H N++ L     +     + +V ELA  G L       R+ + H     +  Y  Q
Sbjct: 66  HSLDHRNLIRLYGVVLT---PPMKMVTELAPLGSLLD---RLRKHQGHFLLGTLSRYAVQ 119

Query: 178 IAAALQYVHSRRILHR 193
           +A  + Y+ S+R +HR
Sbjct: 120 VAEGMGYLESKRFIHR 135

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 4e-09
 Identities = 16/69 (23%), Positives = 23/69 (33%)

Query: 45  DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           +       + +PE LK   +S  SD W  G  L+EM       +        L K  +  
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231

Query: 105 LFPPLPSGV 113
              P P   
Sbjct: 232 ERLPRPEDC 240

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 4e-07
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 9   DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERL 59
           +       + +PE LK   +S  SD W  G  L+E+ ++   P+  ++  ++
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.2 bits (127), Expect = 4e-09
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +  GTP Y++PE +    Y+   D WS G ++YEM+A  +PF+  +
Sbjct: 160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 205

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.1 bits (119), Expect = 4e-08
 Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
             + HP I+ +   F  +  Q++F++++  + G+L        +K       +   Y  +
Sbjct: 59  SIVTHPFIIRMWGTF--QDAQQIFMIMDYIEGGELF----SLLRKSQRFPNPVAKFYAAE 112

Query: 178 IAAALQYVHSRRILHR 193
           +  AL+Y+HS+ I++R
Sbjct: 113 VCLALEYLHSKDIIYR 128

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.6 bits (110), Expect = 5e-07
 Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 24/131 (18%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
                +  GTP Y++PE +    Y+   D WS G ++YE+ +    F  +    + E++ 
Sbjct: 155 PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 214

Query: 61  ELKYSFPSDVWS------LGCVLYEMV------------ALQSPFFSKHISLNGLCKR-I 101
             +  FP              +  ++                 P+F + +    L  R I
Sbjct: 215 NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE-VVWEKLLSRNI 273

Query: 102 EMALFPPLPSG 112
           E    PP+  G
Sbjct: 274 ETPYEPPIQQG 284

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 4e-09
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 42  YEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
           Y+         +M+PE +   +++  SDVW  G  ++E++      F   +  N +  RI
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRI 222

Query: 102 EMALFPPLPSGV 113
           E     P+P   
Sbjct: 223 ENGERLPMPPNC 234

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 7e-09
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HP+IV+L       +   +++++EL   G+L       + +K  L    +  Y  Q
Sbjct: 63  RQFDHPHIVKLIGVI---TENPVWIIMELCTLGELRSF---LQVRKYSLDLASLILYAYQ 116

Query: 178 IAAALQYVHSRRILHR 193
           ++ AL Y+ S+R +HR
Sbjct: 117 LSTALAYLESKRFVHR 132

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 9e-06
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPE 57
                  +M+PE +   +++  SDVW  G  ++E+      P+     
Sbjct: 168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 5e-09
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
             PNI+ L         +   LV E  +  D        +Q    L +  +  Y  +I  
Sbjct: 88  GGPNIITLADIVKDPVSRTPALVFEHVNNTDF-------KQLYQTLTDYDIRFYMYEILK 140

Query: 181 ALQYVHSRRILHR 193
           AL Y HS  I+HR
Sbjct: 141 ALDYCHSMGIMHR 153

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 49  GTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP 107
            + Y+  PE  +    Y +  D+WSLGC+L  M+  + PFF  H + + L  RI   L  
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL-VRIAKVLGT 249

Query: 108 PLPSGVLYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLAL-VIAECRQ----K 162
                 +        P   ++    + +  +              AL  + +  +     
Sbjct: 250 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 309

Query: 163 KCHLAECLVWSYFRQI 178
           +    E +   YF  +
Sbjct: 310 RLTAREAMEHPYFYTV 325

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 13  GTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
            + Y+  PE  +    Y +  D+WSLGC+L  +  F   P++   +   +L 
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM-IFRKEPFFHGHDNYDQLV 241

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 7e-09
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 15  PYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK-YSFPSDVWSL 73
           P  +  +    LK +      S G         + T +Y +PE L   + Y    D+W++
Sbjct: 128 PNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187

Query: 74  GCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLP 110
           GC+L E++           S      RI   L  P  
Sbjct: 188 GCILAELLLRVPFLPGD--SDLDQLTRIFETLGTPTE 222

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L HPNI+ L  AF  +S   + LV +  +     +     +     L    + +Y   
Sbjct: 55  QELSHPNIIGLLDAFGHKS--NISLVFDFMETDLEVI----IKDNSLVLTPSHIKAYMLM 108

Query: 178 IAAALQYVHSRRILHR 193
               L+Y+H   ILHR
Sbjct: 109 TLQGLEYLHQHWILHR 124

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 4e-07
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 11  FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYS 65
            + T +Y +PE L   + Y    D+W++GC+L E+        G        R+ E   +
Sbjct: 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGT 219

Query: 66  FPSDVWSLGCVLYEMVALQS 85
              + W   C L + V  +S
Sbjct: 220 PTEEQWPDMCSLPDYVTFKS 239

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 9e-09
 Identities = 16/68 (23%), Positives = 30/68 (44%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
                  +M+PE + +  Y+  SDVWS G +L+E+ +L +  +         C+R++   
Sbjct: 195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 254

Query: 106 FPPLPSGV 113
               P   
Sbjct: 255 RMRAPDYT 262

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-07
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 13/88 (14%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------------KCH 165
              HH N+V L  A  ++ G  L +++E    G+L+  +   R +            K  
Sbjct: 72  HIGHHLNVVNLLGAC-TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 166 LAECLVWSYFRQIAAALQYVHSRRILHR 193
           L    +  Y  Q+A  ++++ SR+ +HR
Sbjct: 131 LTLEHLICYSFQVAKGMEFLASRKCIHR 158

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 1e-04
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 10  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY 53
                  +M+PE + +  Y+  SDVWS G +L+E+ S   +PY 
Sbjct: 195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 238

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 25  ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQ 84
            +K +              + +F GTP Y++PE L++  Y    D W LG V+YEM+  +
Sbjct: 143 HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

Query: 85  SPFFSKHISLNGLCKRIEMALFPPLPSGV 113
            PF+++      L + I M      P  +
Sbjct: 203 LPFYNQ--DHERLFELILME-EIRFPRTL 228

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           +   HP +  L+ AF  ++   L  V+E A+ G+L   +     ++    E     Y  +
Sbjct: 60  QNTRHPFLTALKYAF--QTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113

Query: 178 IAAALQYVHSRRILHR 193
           I +AL+Y+HSR +++R
Sbjct: 114 IVSALEYLHSRDVVYR 129

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY--MSPERLKEL 62
            +++ +F GTP Y++PE L++  Y    D W LG V+YE+    G   +     ERL EL
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM--MCGRLPFYNQDHERLFEL 216

Query: 63  ----KYSFPSDV 70
               +  FP  +
Sbjct: 217 ILMEEIRFPRTL 228

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 118 KTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F          + +LV+         L+      K   L E  +  
Sbjct: 72  KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM------KHEKLGEDRIQF 125

Query: 174 YFRQIAAALQYVHSRRILHRGERETFLSVLGDCV 207
              Q+   L+Y+H+  I+HR  +   L+V  DC 
Sbjct: 126 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCE 159

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 6e-07
 Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 4/97 (4%)

Query: 46  SFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
            ++ T +Y +PE  L  ++Y+   D+WS+GC++ EM+  ++ F           K I   
Sbjct: 177 GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS--DHLDQLKEIMKV 234

Query: 105 LFPPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
              P P+  +   ++    N ++       +    + 
Sbjct: 235 TGTP-PAEFVQRLQSDEAKNYMKGLPELEKKDFASIL 270

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 2e-05
 Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 6   SSVDSFLGTPYYMSPER-LKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLK 60
           S +  ++ T +Y +PE  L  ++Y+   D+WS+GC++ E+ +    F G+ +    + + 
Sbjct: 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 232

Query: 61  ELKYSFPSDVWS 72
           ++  + P++   
Sbjct: 233 KVTGTPPAEFVQ 244

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL 105
             L    +MSPE LK+  ++  SDVWS G VL+E+  L    + + +S   + + +    
Sbjct: 194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY-QGLSNEQVLRFVMEGG 252

Query: 106 FPPLPSGV 113
               P   
Sbjct: 253 LLDKPDNC 260

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 8e-07
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCH------LAECLV 171
           K  +  ++V L        GQ   +++EL  +GDL   +   R    +       +   +
Sbjct: 78  KEFNCHHVVRLLGVV--SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135

Query: 172 WSYFRQIAAALQYVHSRRILHR 193
                +IA  + Y+++ + +HR
Sbjct: 136 IQMAGEIADGMAYLNANKFVHR 157

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 5   TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
                  L    +MSPE LK+  ++  SDVWS G VL+E+ +    PY  +S E++   
Sbjct: 189 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF 247

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 46  SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
           + + T +Y  PE  L E  Y  P D+W  GC++ EM            +       I   
Sbjct: 180 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN--TEQHQLALISQL 237

Query: 105 LFPPLP 110
                P
Sbjct: 238 CGSITP 243

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 3e-07
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 10  SFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKY 64
           + + T +Y  PE  L E  Y  P D+W  GC++ E+ +      G         + +L  
Sbjct: 180 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCG 239

Query: 65  SFPSDVWSLGCVLYEMVALQSPFFSKHISLNGL 97
           S   +VW           L+     K    + L
Sbjct: 240 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 3e-06
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 10/82 (12%)

Query: 118 KTLHHPNIVELRSAFAS------RSGQELFLVLELADQGDLALVIAECRQKKCHLAECLV 171
           + L H N+V L     +      R    ++LV +  +     L                +
Sbjct: 64  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGL----LSNVLVKFTLSEI 119

Query: 172 WSYFRQIAAALQYVHSRRILHR 193
               + +   L Y+H  +ILHR
Sbjct: 120 KRVMQMLLNGLYYIHRNKILHR 141

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (120), Expect = 2e-08
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
               + +PE L   K+S  SDVW+ G +L+E+       +   I L+ + + +E      
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRME 236

Query: 109 LPSGV 113
            P G 
Sbjct: 237 RPEGC 241

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (116), Expect = 9e-08
 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K + HPN+V+L            +++ E    G+L   + EC +++  ++  ++     Q
Sbjct: 68  KEIKHPNLVQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQ 123

Query: 178 IAAALQYVHSRRILHR 193
           I++A++Y+  +  +HR
Sbjct: 124 ISSAMEYLEKKNFIHR 139

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY-MSPERLKEL 62
               + +PE L   K+S  SDVW+ G +L+E+ ++  +PY  +   ++ EL
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 46  SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
           +  GTP  ++PE +    Y+   D W+LG ++YEM A   PFF+  
Sbjct: 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (103), Expect = 4e-06
 Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + ++ P +V+L   F+ +    L++V+E    G++   +    ++    +E     Y  Q
Sbjct: 96  QAVNFPFLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQ 149

Query: 178 IAAALQYVHSRRILHR 193
           I    +Y+HS  +++R
Sbjct: 150 IVLTFEYLHSLDLIYR 165

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (102), Expect = 6e-06
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 2   SVKTSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKE 61
                   +  GTP  ++PE +    Y+   D W+LG ++YE+    G P + + + ++ 
Sbjct: 189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM--AAGYPPFFADQPIQI 246

Query: 62  LK------YSFPSDVWS 72
            +        FPS   S
Sbjct: 247 YEKIVSGKVRFPSHFSS 263

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 121 HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAA 180
             P +V L  AF  ++  +L L+L+  + G+L   +     ++    E  V  Y  +I  
Sbjct: 87  QSPFLVTLHYAF--QTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGEIVL 140

Query: 181 ALQYVHSRRILHR 193
           AL+++H   I++R
Sbjct: 141 ALEHLHKLGIIYR 153

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 2e-06
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 49  GTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK-HISLNGLCKRIEMAL 105
           GT  YM+P+  R  +  +    D WSLG ++YE++   SPF      +      R  +  
Sbjct: 192 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 251

Query: 106 FPPLPSGV 113
            PP P  +
Sbjct: 252 EPPYPQEM 259

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 8e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 1   MSVKTSSVDSFLGTPYYMSPE--RLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYM 54
           ++ +T     F GT  YM+P+  R  +  +    D WSLG ++YE+ +    F       
Sbjct: 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 239

Query: 55  SPERLKELKYSFPSDVWS 72
           S   +             
Sbjct: 240 SQAEISRRILKSEPPYPQ 257

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 4e-08
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 25  ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEMVAL 83
            +K +      + G  +      + T +Y +PE L   KY S   D+WSLGC+  EMV  
Sbjct: 140 AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199

Query: 84  QSPFFSKH 91
           ++ F    
Sbjct: 200 RALFPGDS 207

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L+HPNIV+L       +  +L+LV E   Q     + A            L+ SY  Q
Sbjct: 56  KELNHPNIVKLLDVI--HTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQ 110

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HS R+LHR
Sbjct: 111 LLQGLAFCHSHRVLHR 126

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDS----FLGTPYYMS 55
             V   +    + T +Y +PE L   KY S   D+WSLGC+  E+ +    F G      
Sbjct: 152 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211

Query: 56  PERLKELKYSFPSDVW 71
             R+     +    VW
Sbjct: 212 LFRIFRTLGTPDEVVW 227

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV+L       + + L LV E  DQ    L+       +  L      S+  Q
Sbjct: 55  KELKHSNIVKLYDVI--HTKKRLVLVFEHLDQDLKKLLD----VCEGGLESVTAKSFLLQ 108

Query: 178 IAAALQYVHSRRILHR 193
           +   + Y H RR+LHR
Sbjct: 109 LLNGIAYCHDRRVLHR 124

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 46  SFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA 104
             + T +Y +P+ L    KYS   D+WS+GC+  EMV     F     S      RI   
Sbjct: 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV--SEADQLMRIFRI 216

Query: 105 LFPPLP 110
           L  P  
Sbjct: 217 LGTPNS 222

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMS 55
             +        + T +Y +P+ L    KYS   D+WS+GC+  E+ +    F G      
Sbjct: 150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ 209

Query: 56  PERLKELKYSFPSDVW 71
             R+  +  +  S  W
Sbjct: 210 LMRIFRILGTPNSKNW 225

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 47  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALF 106
           ++ T YY +PE +  + Y    D+WS+GC++ EMV  +  F  +         ++   L 
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR--DYIDQWNKVIEQLG 235

Query: 107 PPLPSGVLYSDKTLHHPNIVELRSAFASRSGQELF 141
            P P             N VE R  +A  +  +LF
Sbjct: 236 TPCPE--FMKKLQPTVRNYVENRPKYAGLTFPKLF 268

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 11/80 (13%)

Query: 118 KTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K ++H NI+ L + F  +      Q+++LV+EL D           +  +  L    +  
Sbjct: 71  KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC-------QVIQMELDHERMSY 123

Query: 174 YFRQIAAALQYVHSRRILHR 193
              Q+   ++++HS  I+HR
Sbjct: 124 LLYQMLCGIKHLHSAGIIHR 143

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 11  FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSF 66
           ++ T YY +PE +  + Y    D+WS+GC++ E+      F G  Y     ++ E   + 
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Query: 67  PSDVWSLGCVLYEMVALQSPFFSK 90
             +                P ++ 
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAG 261

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 118 KTLHHPNIVELRSAFASRSGQE---LFLVLELADQGDLALVIAECRQKKCHLAECLVWSY 174
               H NI+ +     + + ++   ++LV  L       L+      K  HL+   +  +
Sbjct: 61  LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL------KTQHLSNDHICYF 114

Query: 175 FRQIAAALQYVHSRRILHR 193
             QI   L+Y+HS  +LHR
Sbjct: 115 LYQILRGLKYIHSANVLHR 133

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 22  RLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEM 80
            LK   +               +  ++ T +Y +PE +     Y+   D+WS+GC+L EM
Sbjct: 147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 206

Query: 81  VALQSPFFSKHISLNGLCKRIEMALFPPLP 110
           ++ +  F  KH         I   L  P  
Sbjct: 207 LSNRPIFPGKHY--LDQLNHILGILGSPSQ 234

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 5/98 (5%)

Query: 9   DSFLGTPYYMSPERL-KELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELK 63
             ++ T +Y +PE +     Y+   D+WS+GC+L E+ S    F G  Y      +  + 
Sbjct: 170 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 229

Query: 64  YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRI 101
            S   +  +    L     L S      +  N L    
Sbjct: 230 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA 267

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.3 bits (111), Expect = 4e-07
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 49  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF 87
            T  Y SPE L    +   +D+WS  C+++E++     F
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 229

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.9 bits (97), Expect = 2e-05
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 13  GTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK-YSFPSDVW 71
            T  Y SPE L    +   +D+WS  C+++E+    G   +   E     K     + + 
Sbjct: 191 QTREYRSPEVLLGAPWGCGADIWSTACLIFEL--ITGDFLFEPDEGHSYTKDDDHIAQII 248

Query: 72  SLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLPS 111
            L   L   +     +     +  GL + I    F PL  
Sbjct: 249 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 288

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 6e-07
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 50  TPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP 108
           T +Y  P+ L   K YS   D+WS GC+  E+     P F  +  ++   KRI   L  P
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN-DVDDQLKRIFRLLGTP 222

Query: 109 LP 110
             
Sbjct: 223 TE 224

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           K L H NIV L       S ++L LV E  DQ                L   +V S+  Q
Sbjct: 56  KELKHKNIVRLHDVL--HSDKKLTLVFEFCDQDLKKY----FDSCNGDLDPEIVKSFLFQ 109

Query: 178 IAAALQYVHSRRILHR 193
           +   L + HSR +LHR
Sbjct: 110 LLKGLGFCHSRNVLHR 125

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 6e-05
 Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 11/140 (7%)

Query: 1   MSVKTSSVDSFLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEVDS-----FLGTPYYM 54
             +      + + T +Y  P+ L   K YS   D+WS GC+  E+ +     F G     
Sbjct: 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210

Query: 55  SPERLKELKYSFPSDVWSLGCVL-----YEMVALQSPFFSKHISLNGLCKRIEMALFPPL 109
             +R+  L  +   + W     L     Y M    +   +    LN   + +   L    
Sbjct: 211 QLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN 270

Query: 110 PSGVLYSDKTLHHPNIVELR 129
           P   + +++ L HP   +  
Sbjct: 271 PVQRISAEEALQHPYFSDFC 290

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 46  SFLGTPYYMSPERL------KELKYSFPSDVWSLGCVLYEMVALQSPFFSKH 91
             +GT  YM+PE L      K  +    +D++++G V +E+    S      
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 5/79 (6%)

Query: 120 LHHPNIVELRSAFASRSGQ--ELFLVLELADQGDLALVIAECR---QKKCHLAECLVWSY 174
           L H NI+   +A    +G   +L+LV +  + G L   +       +    LA       
Sbjct: 54  LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113

Query: 175 FRQIAAALQYVHSRRILHR 193
                  +       I HR
Sbjct: 114 AHLHMEIVGTQGKPAIAHR 132

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 10  SFLGTPYYMSPERL------KELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELK 63
             +GT  YM+PE L      K  +    +D++++G V +E+            E  +   
Sbjct: 171 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPY 228

Query: 64  YSFPSDVWSLGCVLYEMV 81
           Y       S+  +   + 
Sbjct: 229 YDLVPSDPSVEEMRKVVC 246

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 7e-06
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 42  YEVDSFLGTPYYMSPE-RLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKR 100
            E+  ++ T +Y +PE  L  + Y+   D+WS+GC++ E++  ++ F           K 
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT--DHIDQLKL 230

Query: 101 IEMALFPPLP 110
           I   +  P  
Sbjct: 231 ILRLVGTPGA 240

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 118 KTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWS 173
           K + H N++ L   F          +++LV  L       +       K   L +  V  
Sbjct: 72  KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI------VKCQKLTDDHVQF 125

Query: 174 YFRQIAAALQYVHSRRILHR 193
              QI   L+Y+HS  I+HR
Sbjct: 126 LIYQILRGLKYIHSADIIHR 145

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 8e-05
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 12/128 (9%)

Query: 14  TPYYMSPE-RLKELKYSFPSDVWSLGCVLYEVDS----FLGTPYYMSPERLKELKYSFPS 68
           T +Y +PE  L  + Y+   D+WS+GC++ E+ +    F GT +    + +  L  +  +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240

Query: 69  DVWSLGCVLYEMVALQS-------PFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLH 121
           ++            +QS        F +  I  N L   +   +        + + + L 
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300

Query: 122 HPNIVELR 129
           H    +  
Sbjct: 301 HAYFAQYH 308

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 7/76 (9%), Positives = 21/76 (27%), Gaps = 17/76 (22%)

Query: 118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQ 177
           + L    + ++ +           +++EL              ++   +           
Sbjct: 69  QKLQGLAVPKVYAWE------GNAVLMEL-----------IDAKELYRVRVENPDEVLDM 111

Query: 178 IAAALQYVHSRRILHR 193
           I   +   + R I+H 
Sbjct: 112 ILEEVAKFYHRGIVHG 127

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	215
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.94
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.94
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.94
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.92
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.92
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.92
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.92
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.92
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.92
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.92
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.91
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.91
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.9
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.9
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.9
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.89
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.89
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.89
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.89
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.89
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.89
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.88
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.87
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.87
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.84
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.84
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.82
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.8
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.76
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.64
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.62
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.25
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.22
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.21
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.2
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.19
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.19
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.16
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.15
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.14
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.13
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.07
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.06
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.06
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.04
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.02
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.01
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.98
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	98.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.89
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	98.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	98.86
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.81
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.81
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	98.76
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	98.75
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.74
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.74
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.74
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.72
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.72
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.71
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.7
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.7
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.7
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	98.7
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.69
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.68
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	98.67
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.66
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.66
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.65
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.64
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.64
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.61
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.61
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.6
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.6
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	98.6
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.55
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.54
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.53
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	98.53
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.51
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.51
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.48
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.47
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.47
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.46
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.33
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.29
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.45
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.79
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	91.95
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	91.59
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	85.73

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-29  Score=192.12  Aligned_cols=100  Identities=28%  Similarity=0.408  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC-----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR-----  189 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-----  189 (215)
                      .+++.++||||+++++++.+..++.+++|||||++|+|.+++......+..+++..++.++.|+++||+|||+++     
T Consensus        55 ~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~  134 (269)
T d2java1          55 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT  134 (269)
T ss_dssp             HHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             HHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            567788999999999998765456789999999999999999877666778999999999999999999999876     


Q ss_pred             ccccccchhhhhhhccceeeccccc
Q psy18117        190 ILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       190 i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      |+||||||+|||++.++.+||+|||
T Consensus       135 IiHrDiKp~NIll~~~~~vkl~DFG  159 (269)
T d2java1         135 VLHRDLKPANVFLDGKQNVKLGDFG  159 (269)
T ss_dssp             -----CCGGGEEECTTSCEEECCHH
T ss_pred             EEeCcCchhhcCcCCCCcEEEeecc
Confidence            9999999999999999999999998

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.8e-30  Score=194.22  Aligned_cols=95  Identities=24%  Similarity=0.289  Sum_probs=87.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|.++|..    +..+++..++.++.||++||+|||++||+|||
T Consensus        55 ~~l~~l~HpnIv~~~~~~~~--~~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrD  128 (271)
T d1nvra_          55 CINKMLNHENVVKFYGHRRE--GNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD  128 (271)
T ss_dssp             HHHHTCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEeeEeeeecc--CceeEEEEeccCCCcHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCc
Confidence            56778899999999999976  5688999999999999999843    44699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       129 iKp~NILl~~~~~~KL~DFG~  149 (271)
T d1nvra_         129 IKPENLLLDERDNLKISDFGL  149 (271)
T ss_dssp             CCGGGEEECTTCCEEECCCTT
T ss_pred             ccHHHEEECCCCCEEEccchh
Confidence            999999999999999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-29  Score=189.82  Aligned_cols=95  Identities=25%  Similarity=0.388  Sum_probs=87.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|.+++..    ...+++..++.++.||++||.|||++||+|||
T Consensus        58 ~il~~l~hpnIv~~~~~~~~--~~~~~ivmEy~~~g~L~~~l~~----~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrD  131 (263)
T d2j4za1          58 EIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRVIHRD  131 (263)
T ss_dssp             HHHHTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhcCCCCCCeEEEEEEE--CCEEEEEEeecCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeee
Confidence            56778899999999999986  5679999999999999999965    23699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       132 iKp~Nill~~~~~~kl~DFG~  152 (263)
T d2j4za1         132 IKPENLLLGSAGELKIADFGW  152 (263)
T ss_dssp             CCGGGEEECTTSCEEECCCCS
T ss_pred             eccccceecCCCCEeecccce
Confidence            999999999999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.9e-29  Score=193.29  Aligned_cols=96  Identities=21%  Similarity=0.273  Sum_probs=87.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILH  192 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H  192 (215)
                      +.+++.++||||++++++|.+  ++.+++|||||++|+|.+++..    +..+++..++.++.|+++||.|||+ +||+|
T Consensus        55 i~il~~l~HpnIv~l~~~~~~--~~~~~iVmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qil~aL~yLH~~~~IiH  128 (322)
T d1s9ja_          55 LQVLHECNSPYIVGFYGAFYS--DGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMH  128 (322)
T ss_dssp             GGGGGGCCCTTBCCEEEEEEC--SSEEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHhCCCCCCCcEEEEEEE--CCEEEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence            367788999999999999987  4679999999999999999965    2369999999999999999999997 59999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.+|++||+|||.
T Consensus       129 RDiKP~NILl~~~~~vkl~DFGl  151 (322)
T d1s9ja_         129 RDVKPSNILVNSRGEIKLCDFGV  151 (322)
T ss_dssp             SCCSGGGEEECTTCCEEECCCCC
T ss_pred             cccCHHHeeECCCCCEEEeeCCC
Confidence            99999999999999999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-29  Score=192.33  Aligned_cols=94  Identities=23%  Similarity=0.366  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|.+++..     ..+++..++.++.||+.||.|||++||+|||
T Consensus        69 ~il~~l~HpnIv~~~~~~~~--~~~~~ivmEy~~gg~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrD  141 (293)
T d1yhwa1          69 LVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRD  141 (293)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeeEeEEEEE--CCEEEEEEEecCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence            56778899999999999976  5679999999999999998743     2599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|++||+|||.
T Consensus       142 iKp~NILl~~~~~vkl~DFG~  162 (293)
T d1yhwa1         142 IKSDNILLGMDGSVKLTDFGF  162 (293)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             CcHHHeEECCCCcEeeccchh
Confidence            999999999999999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.1e-29  Score=191.84  Aligned_cols=96  Identities=25%  Similarity=0.343  Sum_probs=87.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|.+++...   ...+++..++.++.||++||.|||++||+|||
T Consensus        61 ~il~~l~HpnIv~l~~~~~~--~~~~~lvmEy~~~g~L~~~~~~~---~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrD  135 (288)
T d2jfla1          61 DILASCDHPNIVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKIIHRD  135 (288)
T ss_dssp             HHHHHCCCTTBCCEEEEEEE--TTEEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEee--CCeEEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEee
Confidence            56678899999999999976  56899999999999999987642   34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       136 iKp~NIll~~~~~~Kl~DFG~  156 (288)
T d2jfla1         136 LKAGNILFTLDGDIKLADFGV  156 (288)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             cChhheeECCCCCEEEEechh
Confidence            999999999999999999984

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1e-28  Score=188.94  Aligned_cols=97  Identities=19%  Similarity=0.306  Sum_probs=88.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+  ++.+++|||||++|+|.+++..  .....+++..+..++.|+++||.|||++||+|||
T Consensus        65 ~il~~l~HpnIv~~~~~~~~--~~~~~iv~E~~~~g~l~~~l~~--~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrD  140 (287)
T d1opja_          65 AVMKEIKHPNLVQLLGVCTR--EPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD  140 (287)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHH--SCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEecCCccEee--CCeeEEEeecccCcchHHHhhh--ccccchHHHHHHHHHHHHHHHHHHHHHCCcccCc
Confidence            56778899999999999876  5688999999999999999865  2345689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++++||+|||.
T Consensus       141 lKp~NILl~~~~~~Kl~DFG~  161 (287)
T d1opja_         141 LAARNCLVGENHLVKVADFGL  161 (287)
T ss_dssp             CSGGGEEECGGGCEEECCCCC
T ss_pred             cccCeEEECCCCcEEEccccc
Confidence            999999999999999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-28  Score=190.97  Aligned_cols=95  Identities=24%  Similarity=0.325  Sum_probs=87.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  .+.+++|||||++|+|.+++..    +..+++..++.++.||+.||+|||++||+|||
T Consensus        57 ~il~~l~hp~Iv~l~~~~~~--~~~~~iv~ey~~gg~L~~~~~~----~~~~~e~~~~~~~~qil~al~ylH~~~iiHRD  130 (337)
T d1o6la_          57 RVLQNTRHPFLTALKYAFQT--HDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRD  130 (337)
T ss_dssp             HHHHSCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHhCCCCCEEEEEeeecc--ccccccceeccCCCchhhhhhc----ccCCcHHHHHHHHHHHhhhhhhhhhcCccccc
Confidence            56778899999999999987  5689999999999999999865    33699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       131 lKP~NILl~~~g~vkl~DFG~  151 (337)
T d1o6la_         131 IKLENLMLDKDGHIKITDFGL  151 (337)
T ss_dssp             CCGGGEEECTTSCEEECCCTT
T ss_pred             cCHHHeEecCCCCEEEeeccc
Confidence            999999999999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.9e-28  Score=188.47  Aligned_cols=96  Identities=19%  Similarity=0.318  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  ++.+++|||||++|+|.+++..   ....+++.++..++.|+++||.|||+++|+|||
T Consensus        79 ~~l~~l~HpnIv~l~g~~~~--~~~~~iv~Ey~~~g~L~~~~~~---~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrD  153 (299)
T d1jpaa_          79 SIMGQFDHPNVIHLEGVVTK--STPVMIITEFMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRD  153 (299)
T ss_dssp             HHHTTCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHT---TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCCccEEEEEee--CCEEEEEEEecCCCcceeeecc---ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCc
Confidence            56778899999999999876  4679999999999999998754   234689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++++||+|||.
T Consensus       154 lKp~NILl~~~~~~Kl~DFGl  174 (299)
T d1jpaa_         154 LAARNILVNSNLVCKVSDFGL  174 (299)
T ss_dssp             CCGGGEEECTTCCEEECCC--
T ss_pred             cccceEEECCCCcEEECCccc
Confidence            999999999999999999984

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-28  Score=187.86  Aligned_cols=95  Identities=24%  Similarity=0.361  Sum_probs=87.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|.+++..    +..+++..++.++.|++.||.|||++||+|||
T Consensus        60 ~il~~l~HpnIv~l~~~~~~--~~~~~ivmEy~~gg~L~~~~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrD  133 (288)
T d1uu3a_          60 DVMSRLDHPFFVKLYFTFQD--DEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRD  133 (288)
T ss_dssp             HHHHHCCSTTBCCEEEEEEC--SSEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHcCCCCeeEEEEEEEE--CCEEEEEEEccCCCCHHHhhhc----cCCCCHHHHHHHHHHHHHHHHhhccccEEcCc
Confidence            56678899999999999976  5689999999999999999865    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++++|.+||+|||.
T Consensus       134 iKp~NIll~~~~~vkl~DFG~  154 (288)
T d1uu3a_         134 LKPENILLNEDMHIQITDFGT  154 (288)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCccccccCCCceEEeccccc
Confidence            999999999999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2.5e-28  Score=188.45  Aligned_cols=95  Identities=19%  Similarity=0.268  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+  ++.+++|||||++|+|..++..    +..+++..++.++.||++||.|||++||+|||
T Consensus        67 ~il~~l~HpnIv~~~~~~~~--~~~~~iv~E~~~~g~l~~~~~~----~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrD  140 (309)
T d1u5ra_          67 RFLQKLRHPNTIQYRGCYLR--EHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD  140 (309)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCSEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred             HHHHHCCCCCEeeEEEEEEE--CCEEEEEEEecCCCchHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccC
Confidence            56778899999999999876  5679999999999888766543    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++++||+|||.
T Consensus       141 iKp~NILl~~~~~~Kl~DFG~  161 (309)
T d1u5ra_         141 VKAGNILLSEPGLVKLGDFGS  161 (309)
T ss_dssp             CSGGGEEEETTTEEEECCCTT
T ss_pred             CCcceEEECCCCCEEEeeccc
Confidence            999999999999999999984

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.9e-28  Score=185.39  Aligned_cols=95  Identities=16%  Similarity=0.192  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   ..+++|||||++|+|.+++..   .+..+++..+..++.|+++||+|||+++|||||
T Consensus        56 ~~l~~l~HpnIv~~~~~~~~---~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrD  129 (276)
T d1uwha_          56 GVLRKTRHVNILLFMGYSTA---PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD  129 (276)
T ss_dssp             HHHTTCCCTTBCCEEEEECS---SSCEEEEECCCEEEHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeeeEEEec---cEEEEEEecCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccc
Confidence            56678899999999987643   468999999999999999854   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++++||+|||.
T Consensus       130 lKp~NiLl~~~~~~Kl~DFGl  150 (276)
T d1uwha_         130 LKSNNIFLHEDLTVKIGDFGL  150 (276)
T ss_dssp             CCGGGEEEETTSSEEECCCCC
T ss_pred             cCHHHEEEcCCCCEEEccccc
Confidence            999999999999999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1e-27  Score=184.93  Aligned_cols=96  Identities=28%  Similarity=0.388  Sum_probs=85.6

Q ss_pred             ccCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        114 LYSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       114 ~~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      +.++..++||||+++++++.+  ++.+++|||||++|+|.++|..    +..+++..+..++.||+.||.|||++||+||
T Consensus        58 i~il~~l~HpnIv~l~~~~~~--~~~~~lvmE~~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHr  131 (307)
T d1a06a_          58 IAVLHKIKHPNIVALDDIYES--GGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDLGIVHR  131 (307)
T ss_dssp             HHHHHTCCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHhCCCCCCCcEEEEEEE--CCEEEEEEeccCCCcHHHhhhc----ccCCCHHHHHHHHHHHHHHHHhhhhceeeeE
Confidence            366788899999999999976  5689999999999999999954    4579999999999999999999999999999


Q ss_pred             ccchhhhhhh---ccceeecccccC
Q psy18117        194 GERETFLSVL---GDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~---~~~~~ki~D~~~  215 (215)
                      ||||+|||+.   .++.+||+|||.
T Consensus       132 DiKp~Nil~~~~~~~~~vkl~DFG~  156 (307)
T d1a06a_         132 DLKPENLLYYSLDEDSKIMISDFGL  156 (307)
T ss_dssp             CCCGGGEEESSSSTTCCEEECCC--
T ss_pred             EecccceeecccCCCceEEEeccce
Confidence            9999999994   478999999984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.1e-27  Score=181.53  Aligned_cols=97  Identities=26%  Similarity=0.339  Sum_probs=85.3

Q ss_pred             cCCccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCC--c
Q psy18117        115 YSDKTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRR--I  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~--i  190 (215)
                      .+++.++||||+++++++.+.  .+..+++|||||++|+|.+++..    ...+++..++.++.||++||+|||+++  |
T Consensus        60 ~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~gl~yLH~~~~~I  135 (270)
T d1t4ha_          60 EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPI  135 (270)
T ss_dssp             HHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCC
T ss_pred             HHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhc----cccccHHHHHHHHHHHHHHHHHHHHCCCCE
Confidence            567888999999999988642  23468999999999999999965    236999999999999999999999998  9


Q ss_pred             cccccchhhhhhh-ccceeecccccC
Q psy18117        191 LHRGERETFLSVL-GDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~-~~~~~ki~D~~~  215 (215)
                      +||||||+|||++ .++.+||+|||.
T Consensus       136 iHrDiKp~NILl~~~~~~~Kl~DFGl  161 (270)
T d1t4ha_         136 IHRDLKCDNIFITGPTGSVKIGDLGL  161 (270)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EeCCcChhhceeeCCCCCEEEeecCc
Confidence            9999999999996 478999999984

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.92  E-value=6.6e-28  Score=189.17  Aligned_cols=96  Identities=25%  Similarity=0.378  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||++++++|.+  ++.+++|||||++|+|.+++..   ....+++.+++.++.||+.||.|||++||+|||
T Consensus        78 ~il~~l~HpnIv~~~~~~~~--~~~~~ivmE~~~gg~L~~~~~~---~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRD  152 (352)
T d1koba_          78 SIMNQLHHPKLINLHDAFED--KYEMVLILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD  152 (352)
T ss_dssp             HHHTTCCSTTBCCEEEEEEC--SSEEEEEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEEEEEEE--CCEEEEEEEcCCCChHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            56778899999999999986  5689999999999999987643   234699999999999999999999999999999


Q ss_pred             cchhhhhhh--ccceeecccccC
Q psy18117        195 ERETFLSVL--GDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~--~~~~~ki~D~~~  215 (215)
                      |||+|||++  .++.+||+|||.
T Consensus       153 iKp~NILl~~~~~~~vkL~DFGl  175 (352)
T d1koba_         153 IKPENIMCETKKASSVKIIDFGL  175 (352)
T ss_dssp             CCGGGEEESSTTCCCEEECCCTT
T ss_pred             cccccccccccCCCeEEEeeccc
Confidence            999999997  568999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.92  E-value=7.8e-28  Score=183.00  Aligned_cols=95  Identities=22%  Similarity=0.350  Sum_probs=86.8

Q ss_pred             cCCccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.+. ||||+++++++.+  ++.+++|||||++|||.++|..    +..+++.+++.++.||++||+|||++||+||
T Consensus        61 ~~l~~l~~hpnIv~~~~~~~~--~~~~~ivmE~~~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~ivHr  134 (277)
T d1phka_          61 DILRKVSGHPNIIQLKDTYET--NTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHR  134 (277)
T ss_dssp             HHHHHHTTCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             HHHHHhcCCCCeEEEEeeccc--CcceEEEEEcCCCchHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence            4556665 9999999999986  5789999999999999999965    3469999999999999999999999999999


Q ss_pred             ccchhhhhhhccceeecccccC
Q psy18117        194 GERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||+|||++.++.+||+|||.
T Consensus       135 Dlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_         135 DLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             CCSGGGEEECTTCCEEECCCTT
T ss_pred             ccccceEEEcCCCCeEEccchh
Confidence            9999999999999999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.3e-27  Score=185.00  Aligned_cols=95  Identities=17%  Similarity=0.339  Sum_probs=87.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  ++.+++|||||++|+|..++..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        56 ~il~~l~HpnIv~~~~~~~~--~~~~~ivmE~~~gg~l~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrD  129 (316)
T d1fota_          56 LMLSIVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD  129 (316)
T ss_dssp             HHHHSCCBTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             HHHHhccCcChhheeeeEee--CCeeeeEeeecCCccccccccc----cccccccHHHHHHHHHHHhhhhhccCcEEccc
Confidence            56778899999999999986  5689999999999999998854    44689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       130 iKp~NILl~~~g~vkL~DFG~  150 (316)
T d1fota_         130 LKPENILLDKNGHIKITDFGF  150 (316)
T ss_dssp             CCGGGEEECTTSCEEECCCSS
T ss_pred             cCchheeEcCCCCEEEecCcc
Confidence            999999999999999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=1.9e-27  Score=187.32  Aligned_cols=95  Identities=21%  Similarity=0.236  Sum_probs=86.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+...++||||+++++++.+  ++.+++|||||++|+|.++|..    +..+++..++.++.||+.||.|||++||+|||
T Consensus        59 ~~l~~~~hpnIv~l~~~~~~--~~~~~ivmE~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrD  132 (364)
T d1omwa3          59 SLVSTGDCPFIVCMSYAFHT--PDKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRD  132 (364)
T ss_dssp             HHHSSSCCTTBCCEEEEEEC--SSEEEEEECCCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHhcCCCCcEEEEEEEEEE--CCEEEEEEEecCCCcHHHHHHh----cccccHHHHHHHHHHHHHHHHHHHHCCcccee
Confidence            45667889999999999987  4679999999999999999965    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|.+||+|||.
T Consensus       133 lKP~NILl~~~g~iKl~DFGl  153 (364)
T d1omwa3         133 LKPANILLDEHGHVRISDLGL  153 (364)
T ss_dssp             CSGGGEEECSSSCEEECCCTT
T ss_pred             eccceeEEcCCCcEEEeeece
Confidence            999999999999999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-27  Score=181.80  Aligned_cols=94  Identities=17%  Similarity=0.310  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+   +..++|||||++|+|.+++..    ...+++..+..++.||+.||.|||+++|+|||
T Consensus        60 ~il~~l~HpnIv~~~g~~~~---~~~~lvmE~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrD  132 (277)
T d1xbba_          60 NVMQQLDNPYIVRMIGICEA---ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRD  132 (277)
T ss_dssp             HHHHTCCCTTBCCEEEEEES---SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCCceEEEEecc---CCEEEEEEcCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCC
Confidence            55678899999999998864   346899999999999999854    34699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       133 lKp~Nill~~~~~~kl~DFGl  153 (277)
T d1xbba_         133 LAARNVLLVTQHYAKISDFGL  153 (277)
T ss_dssp             CSGGGEEEEETTEEEECCCTT
T ss_pred             CcchhhcccccCcccccchhh
Confidence            999999999999999999984

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.8e-27  Score=179.93  Aligned_cols=96  Identities=19%  Similarity=0.234  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ..+..++||||+++++++..  ++..++|||||++|+|.+++..   .+..+++..+..++.|+++||.|+|+++|+|||
T Consensus        52 ~~l~~l~HpnIv~~~g~~~~--~~~~~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrD  126 (263)
T d1sm2a_          52 EVMMKLSHPKLVQLYGVCLE--QAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD  126 (263)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred             HHHHhcCCCCcccccceecc--CCceEEEEEecCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHhhhccceeecc
Confidence            55678899999999999876  4678999999999999999854   234688999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++++||+|||.
T Consensus       127 lKp~Nill~~~~~~Kl~DFGl  147 (263)
T d1sm2a_         127 LAARNCLVGENQVIKVSDFGM  147 (263)
T ss_dssp             CSGGGEEECGGGCEEECSCC-
T ss_pred             cchhheeecCCCCeEecccch
Confidence            999999999999999999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.8e-28  Score=183.17  Aligned_cols=95  Identities=20%  Similarity=0.318  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+   +.+++|||||++|+|.+++..   .+..+++..+..++.|+++||.|||++||+|||
T Consensus        61 ~il~~l~HpnIv~l~g~~~~---~~~~lvmE~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrD  134 (285)
T d1u59a_          61 QIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD  134 (285)
T ss_dssp             HHHHHCCCTTBCCEEEEEES---SSEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCEeeEeeeecc---CeEEEEEEeCCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCc
Confidence            56678899999999998864   357899999999999998743   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       135 lKp~Nill~~~~~~Kl~DFGl  155 (285)
T d1u59a_         135 LAARNVLLVNRHYAKISDFGL  155 (285)
T ss_dssp             CSGGGEEEEETTEEEECCCTT
T ss_pred             CchhheeeccCCceeeccchh
Confidence            999999999999999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.7e-27  Score=184.11  Aligned_cols=98  Identities=20%  Similarity=0.228  Sum_probs=84.0

Q ss_pred             CCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH-------------------hcCCchhHHHHHHH
Q psy18117        116 SDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ-------------------KKCHLAECLVWSYF  175 (215)
Q Consensus       116 ~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~-------------------~~~~~~~~~~~~~~  175 (215)
                      ++..+ +||||+++++++.+  .+.+++|||||++|+|.++|.....                   ....+++..++.++
T Consensus        93 ~l~~l~~HpnIv~l~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  170 (325)
T d1rjba_          93 MMTQLGSHENIVNLLGACTL--SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFA  170 (325)
T ss_dssp             HHHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHH
T ss_pred             HHHHhcCCCcEeEEEEEEee--CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHH
Confidence            33444 89999999999976  5679999999999999999964211                   12358899999999


Q ss_pred             HHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        176 RQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       176 ~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      .|+++||.|||+++|+||||||+|||++.++++||+|||.
T Consensus       171 ~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGl  210 (325)
T d1rjba_         171 YQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGL  210 (325)
T ss_dssp             HHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGG
T ss_pred             HHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccc
Confidence            9999999999999999999999999999999999999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.9e-27  Score=184.49  Aligned_cols=96  Identities=26%  Similarity=0.285  Sum_probs=86.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||++++++|.+  ++.+|+|||||++|+|.++|..   .+..+++.+++.++.||++||+|||++||+|||
T Consensus        53 ~il~~l~HpnIv~~~~~~~~--~~~~~lvmE~~~gg~L~~~i~~---~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrD  127 (321)
T d1tkia_          53 SILNIARHRNILHLHESFES--MEELVMIFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSHNIGHFD  127 (321)
T ss_dssp             HHHHHSCCTTBCCEEEEEEE--TTEEEEEECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCeEEEEEEE--CCEEEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence            56778899999999999986  5789999999999999999854   233699999999999999999999999999999


Q ss_pred             cchhhhhhhccc--eeecccccC
Q psy18117        195 ERETFLSVLGDC--VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~--~~ki~D~~~  215 (215)
                      |||+|||++.++  ++||+|||.
T Consensus       128 lKp~NIll~~~~~~~ikl~DFG~  150 (321)
T d1tkia_         128 IRPENIIYQTRRSSTIKIIEFGQ  150 (321)
T ss_dssp             CCGGGEEESSSSCCCEEECCCTT
T ss_pred             ccccceeecCCCceEEEEcccch
Confidence            999999998654  899999984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.92  E-value=2.2e-27  Score=186.06  Aligned_cols=96  Identities=20%  Similarity=0.320  Sum_probs=86.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+  ++.+++|||||++|+|.+++..   .+..+++..++.++.||+.||.|||++||+|||
T Consensus        75 ~il~~l~HpnIv~~~~~~~~--~~~~~ivmE~~~gg~L~~~l~~---~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrD  149 (350)
T d1koaa2          75 QTMSVLRHPTLVNLHDAFED--DNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD  149 (350)
T ss_dssp             HHHHHTCCTTBCCEEEEEEE--TTEEEEEECCCCSCBHHHHHTC---TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEEEEEEE--CCEEEEEEEcCCCCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeee
Confidence            66778899999999999976  5789999999999999999843   234699999999999999999999999999999


Q ss_pred             cchhhhhhhc--cceeecccccC
Q psy18117        195 ERETFLSVLG--DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~--~~~~ki~D~~~  215 (215)
                      |||+|||++.  ++.+||+|||.
T Consensus       150 iKp~NIll~~~~~~~vkL~DFG~  172 (350)
T d1koaa2         150 LKPENIMFTTKRSNELKLIDFGL  172 (350)
T ss_dssp             CCGGGEEESSTTSCCEEECCCTT
T ss_pred             echhHeeeccCCCCeEEEeecch
Confidence            9999999964  57999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-27  Score=180.94  Aligned_cols=96  Identities=18%  Similarity=0.275  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +.+++|||||++|+|.+++.....  ..+++..+..++.|+++||.|||+++|+|||
T Consensus        60 ~~l~~l~HpnIv~~~g~~~~---~~~~iv~Ey~~~g~L~~~~~~~~~--~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrD  134 (272)
T d1qpca_          60 NLMKQLQHQRLVRLYAVVTQ---EPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEERNYIHRD  134 (272)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEeEEEeeecc---CCeEEEEEeCCCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCc
Confidence            56678899999999997754   467899999999999998754332  3589999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       135 iKp~NIll~~~~~~Kl~DFGl  155 (272)
T d1qpca_         135 LRAANILVSDTLSCKIADFGL  155 (272)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             cchhheeeecccceeeccccc
Confidence            999999999999999999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=6.1e-27  Score=183.54  Aligned_cols=95  Identities=19%  Similarity=0.270  Sum_probs=87.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ...+++||||+.+|+|..++...    ..+++..++.++.||+.||.|||++||||||
T Consensus        93 ~il~~l~hpnIv~~~~~~~~--~~~~~~v~e~~~~g~l~~~l~~~----~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRD  166 (350)
T d1rdqe_          93 RILQAVNFPFLVKLEFSFKD--NSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRD  166 (350)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHHcCCCcEeeccccccc--ccccccccccccccchhhhHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCc
Confidence            56778899999999999976  56789999999999999998652    3699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.+|++||+|||.
T Consensus       167 IKP~NILl~~~g~ikL~DFG~  187 (350)
T d1rdqe_         167 LKPENLLIDQQGYIQVTDFGF  187 (350)
T ss_dssp             CSGGGEEECTTSCEEECCCTT
T ss_pred             CCHHHcccCCCCCEEeeecee
Confidence            999999999999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.4e-27  Score=179.49  Aligned_cols=95  Identities=24%  Similarity=0.353  Sum_probs=86.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  .+.+++|||||++|+|.++|...    ..+++..++.++.|+++||.|||++||+|||
T Consensus        65 ~il~~l~HpnIv~~~~~~~~--~~~~~iv~E~~~gg~L~~~i~~~----~~l~~~~~~~~~~qi~~al~yLH~~~ivHrD  138 (293)
T d1jksa_          65 SILKEIQHPNVITLHEVYEN--KTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSLQIAHFD  138 (293)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC--SSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhCCCCCCCcEEEEEEE--CCEEEEEEEcCCCccccchhccc----cccchhHHHHHHHHHHHHHHhhhhcceeecc
Confidence            45678899999999999987  56899999999999999999652    3699999999999999999999999999999


Q ss_pred             cchhhhhhhccc----eeecccccC
Q psy18117        195 ERETFLSVLGDC----VRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~----~~ki~D~~~  215 (215)
                      |||+|||++.++    .+||+|||.
T Consensus       139 iKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_         139 LKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             CSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             cccceEEEecCCCcccceEecchhh
Confidence            999999998877    599999984

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-26  Score=177.68  Aligned_cols=93  Identities=22%  Similarity=0.300  Sum_probs=85.5

Q ss_pred             CccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        117 DKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       117 ~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      ...++||||+++++++.+  ++.+|+|||||++|+|.+++..    +..+++..++.++.||+.||+|||++||+|||||
T Consensus        57 ~~~~~hp~Iv~~~~~~~~--~~~~yivmEy~~~g~L~~~i~~----~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDik  130 (320)
T d1xjda_          57 SLAWEHPFLTHMFCTFQT--KENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLK  130 (320)
T ss_dssp             HHHTTCTTBCCEEEEEEC--SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCC
T ss_pred             HHhCCCCcEEEEEEEEcc--CCceeEEEeecCCCcHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            346899999999999987  5679999999999999999965    3359999999999999999999999999999999


Q ss_pred             hhhhhhhccceeecccccC
Q psy18117        197 ETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~~~ki~D~~~  215 (215)
                      |+|||+++++.+||+|||.
T Consensus       131 p~NiL~~~~~~~kl~DFG~  149 (320)
T d1xjda_         131 LDNILLDKDGHIKIADFGM  149 (320)
T ss_dssp             GGGEEECTTSCEEECCCTT
T ss_pred             ccceeecCCCceeccccch
Confidence            9999999999999999984

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-26  Score=180.58  Aligned_cols=96  Identities=22%  Similarity=0.324  Sum_probs=82.7

Q ss_pred             ccCCCcchhhhhhhhcCC--chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccccc
Q psy18117        118 KTLHHPNIVELRSAFASR--SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGE  195 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~--~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDi  195 (215)
                      +..+||||++++++|.+.  ....+|+|||||++|+|.++|...  ....+++.+++.++.||+.||.|||++||+||||
T Consensus        60 ~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~--~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDi  137 (335)
T d2ozaa1          60 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV  137 (335)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSC--SCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhc--CCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence            456899999999998642  235689999999999999999642  1236999999999999999999999999999999


Q ss_pred             chhhhhhhc---cceeecccccC
Q psy18117        196 RETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       196 kp~Nil~~~---~~~~ki~D~~~  215 (215)
                      ||+|||++.   .+.+||+|||.
T Consensus       138 Kp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1         138 KPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             SGGGEEESCSSTTCCEEECCCTT
T ss_pred             cccccccccccccccccccccce
Confidence            999999985   45899999984

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.6e-26  Score=175.80  Aligned_cols=97  Identities=23%  Similarity=0.312  Sum_probs=80.6

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHH------------hcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQ------------KKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~------------~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      +..+|+||+.++..+... +..+++|||||++|+|.++|.....            .+..+++..+..++.|+++||.||
T Consensus        72 ~~~~h~~iv~~~~~~~~~-~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~yl  150 (299)
T d1ywna1          72 HIGHHLNVVNLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL  150 (299)
T ss_dssp             HHCCCTTBCCEEEEECST-TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHH
T ss_pred             hhcCCCeEEEeeeeeccC-CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHH
Confidence            445789999998887653 4568999999999999999975321            123588999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccceeecccccC
Q psy18117        186 HSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+++|+||||||+|||+++++++||+|||.
T Consensus       151 H~~~ivHrDlKp~NILl~~~~~~Kl~DFGl  180 (299)
T d1ywna1         151 ASRKCIHRDLAARNILLSEKNVVKICDFGL  180 (299)
T ss_dssp             HHTTCCCSCCCGGGEEECGGGCEEECC---
T ss_pred             HhCCCcCCcCCccceeECCCCcEEEccCcc
Confidence            999999999999999999999999999984

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.9e-27  Score=179.50  Aligned_cols=95  Identities=22%  Similarity=0.317  Sum_probs=84.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..  ++.+++|||||.++++..++    ..+..+++..++.++.||+.||+|||++||+|||
T Consensus        52 ~il~~l~hpnIv~~~~~~~~--~~~~~ivmE~~~~~~~~~~~----~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrD  125 (299)
T d1ua2a_          52 KLLQELSHPNIIGLLDAFGH--KSNISLVFDFMETDLEVIIK----DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD  125 (299)
T ss_dssp             HHHHHCCCTTBCCEEEEECC--TTCCEEEEECCSEEHHHHHT----TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             HHHHhCCCCCEeEEEeeecc--CCceeehhhhhcchHHhhhh----hcccCCCHHHHHHHHHHHHHHHHHhhccceeccc
Confidence            56778899999999999976  56899999999997666554    2345699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       126 iKp~NIli~~~~~~KL~DFG~  146 (299)
T d1ua2a_         126 LKPNNLLLDENGVLKLADFGL  146 (299)
T ss_dssp             CCGGGEEECTTCCEEECCCGG
T ss_pred             CCcceEEecCCCccccccCcc
Confidence            999999999999999999983

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-26  Score=175.17  Aligned_cols=96  Identities=21%  Similarity=0.284  Sum_probs=86.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..  .+.+++|||||.+|++.+++..   ....+++.++..++.|++.||.|||+++|+|||
T Consensus        61 ~il~~l~H~nIv~~~g~~~~--~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrD  135 (283)
T d1mqba_          61 GIMGQFSHHNIIRLEGVISK--YKPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRD  135 (283)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhcCCCCEeeeeEEEec--CCceEEEEEecccCcchhhhhc---ccccccHHHHHHHHHHHHHhhhhccccccccCc
Confidence            56677899999999999876  4678999999999999988754   234699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+||||+.++++||+|||.
T Consensus       136 lKp~NILl~~~~~~Kl~DFGl  156 (283)
T d1mqba_         136 LAARNILVNSNLVCKVSDFGL  156 (283)
T ss_dssp             CCGGGEEECTTCCEEECCCCC
T ss_pred             cccceEEECCCCeEEEcccch
Confidence            999999999999999999984

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-26  Score=175.10  Aligned_cols=96  Identities=22%  Similarity=0.243  Sum_probs=85.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++..   +.+++|||||++|+|..++....  ...+++..+..++.|++.||.|||++||+|||
T Consensus        64 ~~l~~l~h~nIv~~~g~~~~---~~~~lv~Ey~~~g~l~~~~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~D  138 (285)
T d1fmka3          64 QVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRD  138 (285)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhcccCCEeEEEEEEec---CCeEEEEEecCCCchhhhhhhcc--cccchHHHHHHHHHHHHHHHHHHhhhheeccc
Confidence            55678899999999998753   46899999999999999886533  33599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       139 lKp~NIll~~~~~~kl~DfGl  159 (285)
T d1fmka3         139 LRAANILVGENLVCKVADFGL  159 (285)
T ss_dssp             CSGGGEEECGGGCEEECCCCT
T ss_pred             ccceEEEECCCCcEEEcccch
Confidence            999999999999999999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3e-26  Score=174.06  Aligned_cols=95  Identities=22%  Similarity=0.382  Sum_probs=83.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++..   +.+++|||||++|+|.+++..   .+..+++..+..++.||++||.|||+++|+|||
T Consensus        60 ~~l~~l~HpnIv~l~~~~~~---~~~~iv~E~~~~g~l~~~~~~---~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrD  133 (273)
T d1mp8a_          60 LTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTALAYLESKRFVHRD  133 (273)
T ss_dssp             HHHHTCCCTTBCCEEEEECS---SSCEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEec---CeEEEEEEeccCCcHHhhhhc---cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccc
Confidence            45677899999999998853   568999999999999998754   344689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       134 lKp~NIll~~~~~~Kl~DfG~  154 (273)
T d1mp8a_         134 IAARNVLVSSNDCVKLGDFGL  154 (273)
T ss_dssp             CSGGGEEEEETTEEEECC---
T ss_pred             cchhheeecCCCcEEEccchh
Confidence            999999999999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-26  Score=175.53  Aligned_cols=95  Identities=28%  Similarity=0.406  Sum_probs=84.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++++.+  +..+++|||||.+ ++..++..  .....+++..++.++.|++.||+|||++||+|||
T Consensus        53 ~il~~l~Hp~Iv~~~~~~~~--~~~~~iv~e~~~~-~~~~~~~~--~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrD  127 (298)
T d1gz8a_          53 SLLKELNHPNIVKLLDVIHT--ENKLYLVFEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD  127 (298)
T ss_dssp             HHHTTCCCTTBCCEEEEEEE--TTEEEEEEECCSE-EHHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCcEEEecccccc--ccceeEEEeecCC-chhhhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccc
Confidence            56778899999999999986  5689999999987 56555543  2344699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++++||+|||
T Consensus       128 iKpeNIl~~~~~~~kl~DFG  147 (298)
T d1gz8a_         128 LKPQNLLINTEGAIKLADFG  147 (298)
T ss_dssp             CCGGGEEECTTSCEEECSTT
T ss_pred             cCchheeecccCcceeccCC
Confidence            99999999999999999998

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-25  Score=170.51  Aligned_cols=95  Identities=21%  Similarity=0.278  Sum_probs=85.7

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+   ...++|||||++|++.+++....   ..+++..+..++.|++.||.|||+++|+|||
T Consensus        63 ~~l~~l~H~nIv~~~g~~~~---~~~~lv~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrD  136 (273)
T d1u46a_          63 NAMHSLDHRNLIRLYGVVLT---PPMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESKRFIHRD  136 (273)
T ss_dssp             HHHHHCCCTTBCCEEEEECS---SSCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHhCCCCCEEEEEEEEee---cchheeeeeecCcchhhhhhccc---CCCCHHHHHHHHHHHHHHHHHhhhCCEeeee
Confidence            56778899999999999865   35789999999999999886533   3599999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       137 ikp~NIll~~~~~vkl~DfGl  157 (273)
T d1u46a_         137 LAARNLLLATRDLVKIGDFGL  157 (273)
T ss_dssp             CCGGGEEEEETTEEEECCCTT
T ss_pred             ecHHHhccccccceeeccchh
Confidence            999999999999999999984

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.6e-26  Score=170.28  Aligned_cols=96  Identities=20%  Similarity=0.275  Sum_probs=86.5

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .....++||||+++++++.+  ++.+++||||+++|+|..++..   ....+++..+..++.|+++||.|||++||+|||
T Consensus        51 ~~~~~l~HpnIv~~~g~~~~--~~~~~iv~Ey~~~g~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~d  125 (258)
T d1k2pa_          51 KVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD  125 (258)
T ss_dssp             HHHHTCCCTTBCCEEEEECC--SSSEEEEEECCTTEEHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSC
T ss_pred             HHHHhcCCCceeeEEEEEee--CCceEEEEEccCCCcHHHhhhc---cccCCcHHHHHHHHHHHHHHHHHHhhcCccccc
Confidence            56678899999999999876  4679999999999999998754   234688999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       126 lk~~Nill~~~~~~kl~DfG~  146 (258)
T d1k2pa_         126 LAARNCLVNDQGVVKVSDFGL  146 (258)
T ss_dssp             CSGGGEEECTTCCEEECCCSS
T ss_pred             ccceeEEEcCCCcEEECcchh
Confidence            999999999999999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=8.5e-26  Score=171.88  Aligned_cols=97  Identities=16%  Similarity=0.229  Sum_probs=85.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .+++.++||||+++++++...+.  ..+|+|||||++|+|.+++..    +..+++.++..++.||+.||.|||++||+|
T Consensus        59 ~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~----~~~l~~~~~~~i~~qi~~al~~lH~~~iiH  134 (277)
T d1o6ya_          59 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGIIH  134 (277)
T ss_dssp             HHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcc----cCCCCHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            55678899999999998865322  347899999999999998855    336999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++..||+||+.
T Consensus       135 rDiKP~NIll~~~~~~~l~d~~~  157 (277)
T d1o6ya_         135 RDVKPANIMISATNAVKVMDFGI  157 (277)
T ss_dssp             CCCSGGGEEEETTSCEEECCCTT
T ss_pred             ccccCcccccCccccceeehhhh
Confidence            99999999999999999999973

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.6e-25  Score=167.61  Aligned_cols=98  Identities=20%  Similarity=0.276  Sum_probs=86.3

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++... .+.+++||||+++|+|.++|.....  ..+++..+..++.|++.||.|||+++|+|||
T Consensus        52 ~~l~~l~HpnIv~~~g~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~i~~al~ylH~~~ivH~d  128 (262)
T d1byga_          52 SVMTQLRHSNLVQLLGVIVEE-KGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD  128 (262)
T ss_dssp             HHHTTCCCTTBCCEEEEECCC---CCEEEECCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEEec-CCcEEEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHhhccccccCceeccc
Confidence            567788999999999988643 3568999999999999999976432  2489999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++++||+|||.
T Consensus       129 lkp~Nil~~~~~~~kl~dfg~  149 (262)
T d1byga_         129 LAARNVLVSEDNVAKVSDFGL  149 (262)
T ss_dssp             CSGGGEEECTTSCEEECCCCC
T ss_pred             cchHhheecCCCCEeeccccc
Confidence            999999999999999999984

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.9e-25  Score=172.44  Aligned_cols=99  Identities=21%  Similarity=0.338  Sum_probs=86.9

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHH------------HHhcCCchhHHHHHHHHHHHHH
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAEC------------RQKKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~------------~~~~~~~~~~~~~~~~~ql~~~  181 (215)
                      .++..+ +||||+++++++..  ++.+++|||||++|+|.++|...            ......+++..+..++.|++.|
T Consensus        62 ~~l~~l~~HpnIv~~~~~~~~--~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~g  139 (309)
T d1fvra_          62 EVLCKLGHHPNIINLLGACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  139 (309)
T ss_dssp             HHHTTCCCCTTBCCEEEEEEE--TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHhccCCCCEeeEEEEEec--CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHH
Confidence            445555 79999999999876  56899999999999999998642            1223568999999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|+|+++|+||||||+|||++.++.+||+|||.
T Consensus       140 l~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~  173 (309)
T d1fvra_         140 MDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  173 (309)
T ss_dssp             HHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             HHhhhcCCccccccccceEEEcCCCceEEccccc
Confidence            9999999999999999999999999999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.4e-25  Score=174.72  Aligned_cols=102  Identities=29%  Similarity=0.282  Sum_probs=84.5

Q ss_pred             cccCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        113 VLYSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       113 ~~~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      ++.+++.++||||++++++|....    ...+++|||||++ ++...+.........+++..++.++.||+.||+|||++
T Consensus        63 Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~-~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~  141 (350)
T d1q5ka_          63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  141 (350)
T ss_dssp             HHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCC-ccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            346778889999999999885421    2347899999987 55555544445566799999999999999999999999


Q ss_pred             Cccccccchhhhhhhccc-eeecccccC
Q psy18117        189 RILHRGERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++ .+||+|||.
T Consensus       142 ~IiHrDiKp~NILl~~~~~~~kl~DFG~  169 (350)
T d1q5ka_         142 GICHRDIKPQNLLLDPDTAVLKLCDFGS  169 (350)
T ss_dssp             TEECCCCCGGGEEECTTTCCEEECCCTT
T ss_pred             CCcccCCCcceEEEecCCCceeEecccc
Confidence            999999999999999876 999999984

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-25  Score=169.37  Aligned_cols=96  Identities=23%  Similarity=0.313  Sum_probs=84.3

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH------------HhcCCchhHHHHHHHHHHHHHHHHH
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR------------QKKCHLAECLVWSYFRQIAAALQYV  185 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~~~ql~~~l~~l  185 (215)
                      ...+||||+++++++.+  ++.+++|||||++|+|.++|..+.            .....+++..+..++.||+.||+||
T Consensus        74 ~~~~HpnIv~~~~~~~~--~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~yl  151 (299)
T d1fgka_          74 MIGKHKNIINLLGACTQ--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL  151 (299)
T ss_dssp             HHCCCTTBCCEEEEECS--SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCeEEeccccccc--CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHh
Confidence            33479999999999976  567999999999999999996432            1123589999999999999999999


Q ss_pred             HhCCccccccchhhhhhhccceeecccccC
Q psy18117        186 HSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       186 H~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |+++|+||||||+|||++.++.+||+|||.
T Consensus       152 H~~~ivHrDiKp~NiLl~~~~~~kl~dfg~  181 (299)
T d1fgka_         152 ASKKCIHRDLAARNVLVTEDNVMKIADFGL  181 (299)
T ss_dssp             HHTTCCCSCCSGGGEEECTTCCEEECSTTC
T ss_pred             hhCCEEeeeecccceeecCCCCeEeccchh
Confidence            999999999999999999999999999974

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.1e-25  Score=171.82  Aligned_cols=95  Identities=19%  Similarity=0.279  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++++.+   +..++++||+.+|+|.+++..   ....+++..+..++.|+++||.|||++||+|||
T Consensus        63 ~~l~~l~HpnIv~l~g~~~~---~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrD  136 (317)
T d1xkka_          63 YVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD  136 (317)
T ss_dssp             HHHHHCCCTTBCCEEEEEES---SSEEEEEECCTTCBHHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeeEEEEEec---CCeeEEEEeccCCcccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCc
Confidence            56678899999999999875   356788999999999998754   345799999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       137 lKp~NIll~~~~~~kl~DFGl  157 (317)
T d1xkka_         137 LAARNVLVKTPQHVKITDFGL  157 (317)
T ss_dssp             CCGGGEEEEETTEEEECCCSH
T ss_pred             chhhcceeCCCCCeEeecccc
Confidence            999999999999999999983

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=5.4e-25  Score=169.26  Aligned_cols=99  Identities=23%  Similarity=0.276  Sum_probs=86.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH--------------------HhcCCchhHHHHHH
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR--------------------QKKCHLAECLVWSY  174 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~--------------------~~~~~~~~~~~~~~  174 (215)
                      .+++.++|||++++++.+..  .+..+++|||+++|+|.++|....                    .....+++..+..+
T Consensus        68 ~il~~l~h~niv~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  145 (301)
T d1lufa_          68 ALMAEFDNPNIVKLLGVCAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI  145 (301)
T ss_dssp             HHHHTCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHH
T ss_pred             HHHHhcCCCCcccceeeecc--CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHH
Confidence            56778899999999999876  568899999999999999986421                    11234888999999


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        175 FRQIAAALQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       175 ~~ql~~~l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|++.||.|||+++||||||||+|||++.++++||+|||.
T Consensus       146 ~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGl  186 (301)
T d1lufa_         146 ARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL  186 (301)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred             HHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchh
Confidence            99999999999999999999999999999999999999984

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=4.2e-25  Score=168.77  Aligned_cols=94  Identities=27%  Similarity=0.322  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ++..+++|||+.++.+..+..    .+..+++..++.++.||+.||+|||++||+|||
T Consensus        52 ~il~~l~hpnIv~~~~~~~~--~~~~~i~~e~~~~~~~~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrD  125 (286)
T d1ob3a_          52 SILKELKHSNIVKLYDVIHT--KKRLVLVFEHLDQDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD  125 (286)
T ss_dssp             HGGGGCCCTTBCCEEEEEEC--SSCEEEEEECCSEEHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCcEEeeeeeccc--CCceeEEEEeehhhhHHHHHh----hcCCcchhhhHHHHHHHHHHHHHhccCcEEecC
Confidence            66788899999999999987  567899999999866655542    345699999999999999999999999999999


Q ss_pred             cchhhhhhhccceeeccccc
Q psy18117        195 ERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~  214 (215)
                      |||+|||++.++.+||+|||
T Consensus       126 iKp~NIll~~~~~~kl~DfG  145 (286)
T d1ob3a_         126 LKPQNLLINREGELKIADFG  145 (286)
T ss_dssp             CCGGGEEECTTSCEEECCTT
T ss_pred             CCCceeeEcCCCCEEecccc
Confidence            99999999999999999998

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.5e-24  Score=167.20  Aligned_cols=99  Identities=18%  Similarity=0.257  Sum_probs=87.1

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHh------cCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQK------KCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~------~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .++..++||||+++++.+..  ....++|||||++|+|.+++......      ...+++..+..++.|+++||.|||++
T Consensus        75 ~il~~l~h~nIv~~~~~~~~--~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~  152 (308)
T d1p4oa_          75 SVMKEFNCHHVVRLLGVVSQ--GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN  152 (308)
T ss_dssp             HHGGGCCCTTBCCEEEEECS--SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCCCEeeeeeEEec--CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            56778899999999999875  46789999999999999998754321      12367888999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +|+||||||+|||+++++++||+|||.
T Consensus       153 ~ivHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         153 KFVHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             TCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             CeeeceEcCCceeecCCceEEEeeccc
Confidence            999999999999999999999999984

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-24  Score=165.30  Aligned_cols=94  Identities=22%  Similarity=0.282  Sum_probs=81.1

Q ss_pred             CCccCC--CcchhhhhhhhcCCchhHHHHHHhhhcC-CChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        116 SDKTLH--HPNIVELRSAFASRSGQELFLVLELADQ-GDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       116 ~~~~l~--h~~iv~l~~~~~~~~~~~~~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      +++.++  ||||+++++++.+  ++..++||||+.+ +++.+++..    +..+++..++.++.||++||+|||++||+|
T Consensus        60 il~~l~~~h~nIv~~~~~~~~--~~~~~lv~e~~~~~~~l~~~~~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iiH  133 (273)
T d1xwsa_          60 LLKKVSSGFSGVIRLLDWFER--PDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLH  133 (273)
T ss_dssp             HHHHHCSSSCSBCCEEEEEEC--SSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHhccCCCCccEEEEEEee--CCeEEEEEEeccCcchHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            334443  8999999999987  5688999999986 677787754    346999999999999999999999999999


Q ss_pred             cccchhhhhhhcc-ceeecccccC
Q psy18117        193 RGERETFLSVLGD-CVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~-~~~ki~D~~~  215 (215)
                      |||||+|||++.+ +.+||+|||.
T Consensus       134 rDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_         134 RDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             SCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ccCcccceEEecCCCeEEECcccc
Confidence            9999999999855 7999999984

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.9e-25  Score=167.87  Aligned_cols=96  Identities=20%  Similarity=0.237  Sum_probs=84.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-----  187 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-----  187 (215)
                      .....++||||+++++++...+.  ..+++|||||++|+|.++|+.     ..+++..+..++.|++.||.|+|+     
T Consensus        49 ~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~  123 (303)
T d1vjya_          49 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGT  123 (303)
T ss_dssp             HTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred             HHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            44566889999999999875322  257899999999999999964     258899999999999999999996     


Q ss_pred             ---CCccccccchhhhhhhccceeecccccC
Q psy18117        188 ---RRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       188 ---~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                         +||+||||||+||||+.++++||+|||.
T Consensus       124 ~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_         124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             TCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence               6999999999999999999999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.5e-25  Score=169.39  Aligned_cols=97  Identities=18%  Similarity=0.215  Sum_probs=85.4

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .++..++||||+++++.+... +...++|||||++|+|.+++..   ....+++..+..++.|++.||.|+|+++|+|||
T Consensus        80 ~~l~~l~HpnIv~~~g~~~~~-~~~~~lv~E~~~~g~l~~~~~~---~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrD  155 (311)
T d1r0pa_          80 IIMKDFSHPNVLSLLGICLRS-EGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD  155 (311)
T ss_dssp             HHHHTCCCTTBCCCCEEEEET-TTEEEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             HHHHhCCCCCEeEEeEEEEec-CCceEEEEEEeecCchhhhhcc---ccccchHHHHHHHHHHHHHhhhhhcccCcccCC
Confidence            566788999999999987643 3568899999999999998854   334577888999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       156 LK~~NILl~~~~~~kL~DFG~  176 (311)
T d1r0pa_         156 LAARNCMLDEKFTVKVADFGL  176 (311)
T ss_dssp             CSGGGEEECTTCCEEECSSGG
T ss_pred             ccHHhEeECCCCCEEEecccc
Confidence            999999999999999999983

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.7e-24  Score=167.19  Aligned_cols=97  Identities=21%  Similarity=0.244  Sum_probs=84.1

Q ss_pred             CccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHH--------------HhcCCchhHHHHHHHHHHHHH
Q psy18117        117 DKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECR--------------QKKCHLAECLVWSYFRQIAAA  181 (215)
Q Consensus       117 ~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~--------------~~~~~~~~~~~~~~~~ql~~~  181 (215)
                      ...+ +||||+++++.+.+  .+.+++|||||++|+|.+++....              .....+++..+..++.||+.|
T Consensus        80 ~~~l~~HpnIv~~~g~~~~--~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  157 (311)
T d1t46a_          80 LSYLGNHMNIVNLLGACTI--GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG  157 (311)
T ss_dssp             HHHHCCCTTBCCEEEEECS--SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHH
T ss_pred             HHhccCCCCEEEEEEEEee--CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHH
Confidence            3444 69999999999976  467899999999999999986532              122358899999999999999


Q ss_pred             HHHHHhCCccccccchhhhhhhccceeecccccC
Q psy18117        182 LQYVHSRRILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       182 l~~lH~~~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +.|||+++|+||||||+|||++.++.+||+|||.
T Consensus       158 l~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~  191 (311)
T d1t46a_         158 MAFLASKNCIHRDLAARNILLTHGRITKICDFGL  191 (311)
T ss_dssp             HHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGG
T ss_pred             HHHHHhCCeeecccccccccccccCcccccccch
Confidence            9999999999999999999999999999999983

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.87  E-value=1.6e-24  Score=168.56  Aligned_cols=94  Identities=21%  Similarity=0.251  Sum_probs=81.9

Q ss_pred             cCCccC-CCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTL-HHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l-~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .++..+ .||||+++++.|.......+++|||||++|+|..+.       ..+++..++.++.||+.||.|||++||+||
T Consensus        81 ~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL~~LH~~gIvHr  153 (328)
T d3bqca1          81 KILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSMGIMHR  153 (328)
T ss_dssp             HHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             HHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            445566 499999999998765556789999999999998764       249999999999999999999999999999


Q ss_pred             ccchhhhhhhccc-eeecccccC
Q psy18117        194 GERETFLSVLGDC-VRTVSEQAK  215 (215)
Q Consensus       194 Dikp~Nil~~~~~-~~ki~D~~~  215 (215)
                      ||||+|||++.++ .+||+|||.
T Consensus       154 DiKp~NILi~~~~~~vkl~DFG~  176 (328)
T d3bqca1         154 DVKPHNVMIDHEHRKLRLIDWGL  176 (328)
T ss_dssp             CCSGGGEEEETTTTEEEECCGGG
T ss_pred             cccccceEEcCCCCeeeeccccc
Confidence            9999999998765 799999983

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-24  Score=169.90  Aligned_cols=96  Identities=19%  Similarity=0.256  Sum_probs=81.8

Q ss_pred             cCCccCCCcchhhhhhhhcCCch--hHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSG--QELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILH  192 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~--~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H  192 (215)
                      .+++.++|||++++++++.....  ...+++++|+.+|+|.+++..     ..+++..++.++.|+++||+|||++||+|
T Consensus        58 ~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~-----~~l~~~~i~~i~~qil~al~yLH~~~iiH  132 (345)
T d1pmea_          58 KILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLH  132 (345)
T ss_dssp             HHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcC
Confidence            66788899999999999865321  123445566778899999854     25999999999999999999999999999


Q ss_pred             cccchhhhhhhccceeecccccC
Q psy18117        193 RGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       193 rDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||||+|||++.++.+||+|||.
T Consensus       133 RDIKp~NILl~~~~~~kl~DfG~  155 (345)
T d1pmea_         133 RDLKPSNLLLNTTCDLKICDFGL  155 (345)
T ss_dssp             CCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCCcceEEECCCCCEEEcccCc
Confidence            99999999999999999999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.7e-24  Score=165.87  Aligned_cols=94  Identities=20%  Similarity=0.269  Sum_probs=85.0

Q ss_pred             cCCccCCC-cchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcccc
Q psy18117        115 YSDKTLHH-PNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHR  193 (215)
Q Consensus       115 ~~~~~l~h-~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~Hr  193 (215)
                      .+++.++| |||+++++.+.+  ...++++|||+.+|+|.+++...    ..+++..++.++.||+.||+|||+++|+||
T Consensus        80 ~il~~l~h~pnIv~~~~~~~~--~~~~~~v~e~~~~~~L~~~i~~~----~~~~e~~~~~~~~Qi~~al~~lH~~~ivHr  153 (322)
T d1vzoa_          80 QVLEHIRQSPFLVTLHYAFQT--ETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKLGIIYR  153 (322)
T ss_dssp             HHHHHHHTCTTBCCEEEEEEE--TTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHhccCCCeEEEeeeeecc--CCceeeeeecccccHHHHHHHhc----ccccHHHHHHHHHHHHHHHHHhhcCCEEec
Confidence            56677766 899999999876  46799999999999999998653    358899999999999999999999999999


Q ss_pred             ccchhhhhhhccceeeccccc
Q psy18117        194 GERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       194 Dikp~Nil~~~~~~~ki~D~~  214 (215)
                      ||||+|||++.+|.+||+|||
T Consensus       154 DiKp~Nill~~~~~vkL~DFG  174 (322)
T d1vzoa_         154 DIKLENILLDSNGHVVLTDFG  174 (322)
T ss_dssp             CCCGGGEEECTTSCEEESCSS
T ss_pred             cCCccceeecCCCCEEEeecc
Confidence            999999999999999999998

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.7e-24  Score=166.17  Aligned_cols=95  Identities=23%  Similarity=0.359  Sum_probs=82.0

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++|||+++++++|...+    ...+++|||||.. +|..+++.     ..+++..++.++.||+.||.|||++||
T Consensus        69 ~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~I  142 (346)
T d1cm8a_          69 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGI  142 (346)
T ss_dssp             HHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCSE-EHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHhcCCCCeeEEEEEeccCccccccceEEEEEecccc-cHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            5667889999999999987532    1257899999954 77776532     359999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+|||.
T Consensus       143 iHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_         143 IHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cccccCcchhhcccccccccccccc
Confidence            9999999999999999999999984

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-23  Score=160.99  Aligned_cols=95  Identities=27%  Similarity=0.307  Sum_probs=85.2

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+++.++||||+++++.+..  ....++++|++.+++|..++..    ...+++..++.++.|+++||+|||++||+|||
T Consensus        53 ~il~~l~h~niv~~~~~~~~--~~~~~iv~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrD  126 (292)
T d1unla_          53 CLLKELKHKNIVRLHDVLHS--DKKLTLVFEFCDQDLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD  126 (292)
T ss_dssp             HHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCSEEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             HHHHhcCcCCEEeecccccc--ccceeEEeeecccccccccccc----ccccchhHHHHHHHHHHHHHHHhhcCCEeeec
Confidence            56678899999999999987  4578899999999888877643    34689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||++.++.+||+|||.
T Consensus       127 iKP~NIli~~~~~~kl~DFG~  147 (292)
T d1unla_         127 LKPQNLLINRNGELKLANFGL  147 (292)
T ss_dssp             CSGGGEEECTTCCEEECCCTT
T ss_pred             ccCcccccccCCceeeeecch
Confidence            999999999999999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.5e-23  Score=159.36  Aligned_cols=95  Identities=21%  Similarity=0.266  Sum_probs=79.5

Q ss_pred             ccCCCcchhhhhhhhcCC---chhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        118 KTLHHPNIVELRSAFASR---SGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      ...+||||++++++|...   ....++++||||++|++.....   .....+++..++.++.|++.||+|||++||+|||
T Consensus        65 ~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrD  141 (305)
T d1blxa_          65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD  141 (305)
T ss_dssp             HHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             hhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecC
Confidence            345799999999988532   2346899999999866554432   2344689999999999999999999999999999


Q ss_pred             cchhhhhhhccceeecccccC
Q psy18117        195 ERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~~~~~ki~D~~~  215 (215)
                      |||+|||+++++.+||+|||.
T Consensus       142 iKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_         142 LKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             CCGGGEEECTTCCEEECSCCS
T ss_pred             CCccEEEEcCCCCeeecchhh
Confidence            999999999999999999973

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.9e-23  Score=162.60  Aligned_cols=96  Identities=23%  Similarity=0.279  Sum_probs=81.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCc---hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCcc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS---GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRIL  191 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~  191 (215)
                      .+++.++|||++++++++....   ....+++++|+.+|+|.+++..     ..+++..++.++.||+.||.|||++||+
T Consensus        69 ~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~-----~~l~e~~~~~i~~qil~aL~~LH~~gii  143 (348)
T d2gfsa1          69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADII  143 (348)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            5677889999999999886432   2345667888889999998842     3599999999999999999999999999


Q ss_pred             ccccchhhhhhhccceeecccccC
Q psy18117        192 HRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       192 HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||||||+|||++.+|.+|++||+.
T Consensus       144 HrDiKp~NILi~~~~~~kl~dfg~  167 (348)
T d2gfsa1         144 HRDLKPSNLAVNEDCELKILDFGL  167 (348)
T ss_dssp             CCCCCGGGEEECTTCCEEECCC--
T ss_pred             ccccCCccccccccccccccccch
Confidence            999999999999999999999973

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.3e-23  Score=159.72  Aligned_cols=97  Identities=18%  Similarity=0.291  Sum_probs=80.6

Q ss_pred             cCCccCCCcchhhhhhhhcCCc------hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhC
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS------GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSR  188 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  188 (215)
                      .+++.++|||++++++++....      .+.++++||||.++.+....    .....+++..++.++.|+++||.|||++
T Consensus        61 ~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~----~~~~~~~~~~~~~i~~qil~~l~~lH~~  136 (318)
T d3blha1          61 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS----NVLVKFTLSEIKRVMQMLLNGLYYIHRN  136 (318)
T ss_dssp             HHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHT----CTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhh----hcccccccHHHHHHHHHHHHHHHHhccC
Confidence            5677889999999998875422      23467899999986555443    2344689999999999999999999999


Q ss_pred             CccccccchhhhhhhccceeecccccC
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      ||+||||||+|||++.++.+||+|||.
T Consensus       137 ~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1         137 KILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             CEEecCcCchheeecCCCcEEeeecce
Confidence            999999999999999999999999984

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.8e-23  Score=160.88  Aligned_cols=94  Identities=27%  Similarity=0.400  Sum_probs=80.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCc----hhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRS----GQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRI  190 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  190 (215)
                      .+++.++||||++++++|....    ...+|+|||||.+ ++.+.+.      ..+++..++.++.|++.||.|||++||
T Consensus        68 ~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~------~~~~~~~i~~~~~qil~gl~~LH~~gi  140 (355)
T d2b1pa1          68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGI  140 (355)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccch-HHHHhhh------cCCCHHHHHHHHHHHHHHHHHhhhccc
Confidence            5567789999999999986432    3578999999987 5554442      258999999999999999999999999


Q ss_pred             cccccchhhhhhhccceeecccccC
Q psy18117        191 LHRGERETFLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       191 ~HrDikp~Nil~~~~~~~ki~D~~~  215 (215)
                      +||||||+|||++.++.+||+||+.
T Consensus       141 iHrDlKP~Nil~~~~~~~kl~df~~  165 (355)
T d2b1pa1         141 IHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             ccccCCccccccccccceeeechhh
Confidence            9999999999999999999999973

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.80  E-value=1.5e-21  Score=149.35  Aligned_cols=92  Identities=17%  Similarity=0.138  Sum_probs=76.9

Q ss_pred             ccCC-CcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccc
Q psy18117        118 KTLH-HPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGER  196 (215)
Q Consensus       118 ~~l~-h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDik  196 (215)
                      ..+. |++++.+++.+..  +...++||||+. |+|.+++...   ...+++..+..++.|++.||.|||++||+|||||
T Consensus        55 ~~l~~~~~i~~~~~~~~~--~~~~~~vme~~~-~~l~~~~~~~---~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiK  128 (293)
T d1csna_          55 KLLAGCTGIPNVYYFGQE--GLHNVLVIDLLG-PSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK  128 (293)
T ss_dssp             HHTTTCTTCCCEEEEEEE--TTEEEEEEECCC-CBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred             HHhcCCCCCCEEEEEeec--CCccEEEEEecC-CCHHHHHHhh---ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCC
Confidence            3443 4788888877755  567889999995 6999988542   3369999999999999999999999999999999


Q ss_pred             hhhhhhhc-----cceeecccccC
Q psy18117        197 ETFLSVLG-----DCVRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~-----~~~~ki~D~~~  215 (215)
                      |+|||++.     ++.+||+|||.
T Consensus       129 p~Nili~~~~~~~~~~vkl~DFG~  152 (293)
T d1csna_         129 PDNFLIGRPNSKNANMIYVVDFGM  152 (293)
T ss_dssp             GGGEEECCSSSTTTTCEEECCCTT
T ss_pred             ccceeecCcccccCCceEEcccce
Confidence            99999964     56899999984

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=1.3e-20  Score=144.45  Aligned_cols=96  Identities=14%  Similarity=0.087  Sum_probs=74.9

Q ss_pred             cCCccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccc
Q psy18117        115 YSDKTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRG  194 (215)
Q Consensus       115 ~~~~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrD  194 (215)
                      .+.+.++|++++..+..+.. .++..++||||+.+ +|.+.+..   ....+++..+..++.|++.||+|||++||+|||
T Consensus        54 ~i~~~l~~~~~i~~~~~~~~-~~~~~~ivme~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrD  128 (299)
T d1ckia_          54 KIYKMMQGGVGIPTIRWCGA-EGDYNVMVMELLGP-SLEDLFNF---CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD  128 (299)
T ss_dssp             HHHHHSTTSTTCCCEEEEEE-ETTEEEEEEECCCC-BHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             HHHHHccCCCcccEEEEEEe-cCCEEEEEEEEcCC-chhhhhhh---ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence            45566767766655544433 24567889999965 77776643   234699999999999999999999999999999


Q ss_pred             cchhhhhhhc---cceeecccccC
Q psy18117        195 ERETFLSVLG---DCVRTVSEQAK  215 (215)
Q Consensus       195 ikp~Nil~~~---~~~~ki~D~~~  215 (215)
                      |||+|||++.   +..+||+|||.
T Consensus       129 iKp~NIl~~~~~~~~~vkl~DFG~  152 (299)
T d1ckia_         129 VKPDNFLMGLGKKGNLVYIIDFGL  152 (299)
T ss_dssp             CCGGGEEECCGGGTTCEEECCCSS
T ss_pred             CCHhhccccccCCCceeeeeccCc
Confidence            9999998754   44799999984

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.64  E-value=5.6e-18  Score=121.37  Aligned_cols=79  Identities=13%  Similarity=0.050  Sum_probs=61.0

Q ss_pred             cCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhCCccccccchh
Q psy18117        119 TLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHSRRILHRGERET  198 (215)
Q Consensus       119 ~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~HrDikp~  198 (215)
                      .+.|++++..++.      ...+++|||++++.+.           .+++..+..++.|+++|+.|||++||+||||||+
T Consensus        70 ~l~~~~v~~~~~~------~~~~lvme~~~~~~~~-----------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~  132 (191)
T d1zara2          70 KLQGLAVPKVYAW------EGNAVLMELIDAKELY-----------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQY  132 (191)
T ss_dssp             HTTTSSSCCEEEE------ETTEEEEECCCCEEGG-----------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred             HccCCCcceEEEe------cCCEEEEEeecccccc-----------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChh
Confidence            3445565554432      1235899999985443           2567778899999999999999999999999999


Q ss_pred             hhhhhccceeecccccC
Q psy18117        199 FLSVLGDCVRTVSEQAK  215 (215)
Q Consensus       199 Nil~~~~~~~ki~D~~~  215 (215)
                      |||+++++ ++|+|||.
T Consensus       133 NILv~~~~-~~liDFG~  148 (191)
T d1zara2         133 NVLVSEEG-IWIIDFPQ  148 (191)
T ss_dssp             SEEEETTE-EEECCCTT
T ss_pred             heeeeCCC-EEEEECCC
Confidence            99998655 78889984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=1.1e-17  Score=131.02  Aligned_cols=97  Identities=13%  Similarity=0.191  Sum_probs=75.3

Q ss_pred             ccCCCcchhhhhhhhcCCchhHHHHHHhhhcCCChHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-CCccccccc
Q psy18117        118 KTLHHPNIVELRSAFASRSGQELFLVLELADQGDLALVIAECRQKKCHLAECLVWSYFRQIAAALQYVHS-RRILHRGER  196 (215)
Q Consensus       118 ~~l~h~~iv~l~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~HrDik  196 (215)
                      ..+.|+||+++++.+.........++++++..++....... ......+++..++.++.|+++|++|||+ +||+|||||
T Consensus        75 ~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlK  153 (362)
T d1q8ya_          75 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK-KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIK  153 (362)
T ss_dssp             HHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHH-HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCS
T ss_pred             hhcCcCceEEEEEEeeeccccceeeeeeecccccccccccc-cccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCC
Confidence            34568999999988765434455667777665444433322 2344578999999999999999999997 899999999


Q ss_pred             hhhhhhhccc------eeecccccC
Q psy18117        197 ETFLSVLGDC------VRTVSEQAK  215 (215)
Q Consensus       197 p~Nil~~~~~------~~ki~D~~~  215 (215)
                      |+|||++.++      .+||+|||.
T Consensus       154 p~NIll~~~~~~~~~~~~kl~dfg~  178 (362)
T d1q8ya_         154 PENVLMEIVDSPENLIQIKIADLGN  178 (362)
T ss_dssp             GGGEEEEEEETTTTEEEEEECCCTT
T ss_pred             hhHeeeeccCcccccceeeEeeccc
Confidence            9999998776      499999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.7e-12  Score=98.25  Aligned_cols=104  Identities=24%  Similarity=0.395  Sum_probs=64.1

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQS   85 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~   85 (215)
                      ....+.+||+.|||||.+.+..|+.++|+||+|+.++++  +.|.++|......               -.+........
T Consensus       171 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyem--ltG~~Pf~~~~~~---------------~~~~~~~~~~~  233 (293)
T d1yhwa1         171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM--IEGEPPYLNENPL---------------RALYLIATNGT  233 (293)
T ss_dssp             CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHH--HHSSCTTTTSCHH---------------HHHHHHHHHCS
T ss_pred             ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHH--hhCCCCCCCCCHH---------------HHHHHHHhCCC
Confidence            345677899999999998888888888999999999988  4576666421110               01222222222


Q ss_pred             CccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         86 PFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        86 p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                      |............+.+....+...|..++.+.+.++||++.
T Consensus       234 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~  274 (293)
T d1yhwa1         234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK  274 (293)
T ss_dssp             CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGG
T ss_pred             CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence            21111111223344445555666788888888888999874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.8e-12  Score=97.03  Aligned_cols=40  Identities=60%  Similarity=1.276  Sum_probs=18.9

Q ss_pred             cCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117         48 LGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      .||+.|++||.+.+..|+.++|+||+|++++||++|+.||
T Consensus       175 ~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf  214 (269)
T d2java1         175 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF  214 (269)
T ss_dssp             -CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCC
Confidence            4444444444444444444444555555455554444444

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.1e-12  Score=96.71  Aligned_cols=104  Identities=20%  Similarity=0.285  Sum_probs=61.2

Q ss_pred             cccccccCcccccccccccCCC-CcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQS   85 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~-~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~   85 (215)
                      ...+.+||+.|||||.+.+..+ +.++|+||+|+.++++.  .|.++|..+..           .    ...........
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml--~G~~pf~~~~~-----------~----~~~~~~~~~~~  223 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML--AGELPWDQPSD-----------S----CQEYSDWKEKK  223 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHH--HSSCSCSSSST-----------T----SHHHHHHHTTC
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHH--hCCCCCCCCCh-----------H----HHHHHHHhcCC
Confidence            3467889999999999887665 57789999999999984  57766632210           0    00111111111


Q ss_pred             CccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhh
Q psy18117         86 PFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVE  127 (215)
Q Consensus        86 p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~  127 (215)
                      .+...........+.+....+...|.+++.+.+.++||++.+
T Consensus       224 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         224 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            111111111122233444455667788888888899998754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=6.4e-12  Score=94.01  Aligned_cols=41  Identities=37%  Similarity=0.721  Sum_probs=26.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+ +++.++|+||+|+++++|++|+.||.
T Consensus       173 ~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~  213 (270)
T d1t4ha_         173 VIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  213 (270)
T ss_dssp             SCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCC
Confidence            456666666666543 46666666666666666666666664

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.1e-12  Score=95.44  Aligned_cols=42  Identities=33%  Similarity=0.590  Sum_probs=24.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|+|||.+.+..++.++|+||+|+++++|++|+.||.
T Consensus       164 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~  205 (263)
T d2j4za1         164 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE  205 (263)
T ss_dssp             TTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTC
T ss_pred             cCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCC
Confidence            345566666665555555555566666666666666655553

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.5e-12  Score=96.36  Aligned_cols=45  Identities=49%  Similarity=0.781  Sum_probs=31.7

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      +.+||+.|+|||.+.+..|+.++|+||+||+++||++|+.||...
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            456777777777777767777777777777777777777777554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=8.8e-12  Score=94.11  Aligned_cols=101  Identities=28%  Similarity=0.458  Sum_probs=55.6

Q ss_pred             cccccCcccccccccc-----cCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhc
Q psy18117          9 DSFLGTPYYMSPERLK-----ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVAL   83 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~-----~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g   83 (215)
                      .+.+||+.|||||++.     ...|+.++|+||+|+.++++.  .|.++|....         ..      -++.....+
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyeml--tg~~Pf~~~~---------~~------~~~~~i~~~  230 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA--EIEPPHHELN---------PM------RVLLKIAKS  230 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHH--HSSCTTTTSC---------GG------GHHHHHHHS
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHh--hCCCCCCCCC---------HH------HHHHHHHcC
Confidence            4677888888888773     344677778888888888874  4555553110         00      012333333


Q ss_pred             CCCccccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchh
Q psy18117         84 QSPFFSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIV  126 (215)
Q Consensus        84 ~~p~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv  126 (215)
                      ..|..........-.+.+....+...|..++.+.+.++||++.
T Consensus       231 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         231 EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             CCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             CCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            3332221111222233344445566677777777788888764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.6e-12  Score=94.86  Aligned_cols=42  Identities=36%  Similarity=0.702  Sum_probs=21.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|+|||.+.+..|+.++|+||+||+++||++|+.||.
T Consensus       175 ~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~  216 (305)
T d1blxa_         175 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  216 (305)
T ss_dssp             CCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence            345555555555544445555555555555555555554443

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.6e-11  Score=93.45  Aligned_cols=49  Identities=35%  Similarity=0.708  Sum_probs=40.7

Q ss_pred             cccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          5 TSSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         5 ~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      +....+++||+.|||||.+.+..|+.++|+||+||.++|+.  .|.++|..
T Consensus       159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml--~G~~pf~~  207 (337)
T d1o6la_         159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM--CGRLPFYN  207 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH--HSSCSSCC
T ss_pred             CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHH--HCCCCCCC
Confidence            34456789999999999999989999999999999999994  57776653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.14  E-value=7.2e-12  Score=95.44  Aligned_cols=42  Identities=38%  Similarity=0.744  Sum_probs=21.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .+||+.|+|||.+.+..|+.++|+||+|+++++|++|+.||.
T Consensus       169 ~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  210 (307)
T d1a06a_         169 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY  210 (307)
T ss_dssp             ----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCC
Confidence            345555555555555555555555555555555555555554

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=1.5e-11  Score=93.67  Aligned_cols=43  Identities=42%  Similarity=0.724  Sum_probs=24.9

Q ss_pred             cccccCccccccccccc---CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE---LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~---~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|||||++.+   ..|+.++|+||+|+.++|+.  .|.++|
T Consensus       169 ~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~--~g~~Pf  214 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA--ERKPPL  214 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHH--HSSCTT
T ss_pred             CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHH--HCCCCC
Confidence            45566666666666642   23566666666666666663  344444

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.4e-11  Score=90.81  Aligned_cols=43  Identities=44%  Similarity=0.901  Sum_probs=24.6

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|||||++.+..|+.++|+||+|+.++++.  .|.++|
T Consensus       168 ~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell--~g~~Pf  210 (288)
T d1uu3a_         168 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV--AGLPPF  210 (288)
T ss_dssp             --CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHH--HSSCSS
T ss_pred             ccccCCccccCceeeccCCCCcccceehhhHHHHHHh--hCCCCC
Confidence            3455666666666666556666666666666666663  344444

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.9e-11  Score=91.56  Aligned_cols=94  Identities=23%  Similarity=0.408  Sum_probs=48.0

Q ss_pred             cccccCcccccccccccCCC-CcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCc
Q psy18117          9 DSFLGTPYYMSPERLKELKY-SFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~-~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      ++++||+.|+|||++.+..+ +.++|+||+|+.++++.  .|.++|...+.+.......+                    
T Consensus       167 ~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell--~g~~Pf~~~~~i~~~~~~~~--------------------  224 (273)
T d1xwsa_         167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV--CGDIPFEHDEEIIRGQVFFR--------------------  224 (273)
T ss_dssp             CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH--HSSCSCCSHHHHHHCCCCCS--------------------
T ss_pred             cccccCCCcCCHHHHcCCCCCCcccccccceeeehhHh--hCCCCCCCchHHhhcccCCC--------------------
Confidence            45566666666666654443 44556666666666663  35555544333322221111                    


Q ss_pred             cccccchhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhh
Q psy18117         88 FSKHISLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVEL  128 (215)
Q Consensus        88 ~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l  128 (215)
                        ...  ..-.+.+....+...|.+++.+.+.++||++.++
T Consensus       225 --~~~--s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         225 --QRV--SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             --SCC--CHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             --CCC--CHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence              111  1112333333445566677777778888877553

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=8.8e-11  Score=89.84  Aligned_cols=102  Identities=27%  Similarity=0.510  Sum_probs=58.9

Q ss_pred             cccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCC
Q psy18117          7 SVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSP   86 (215)
Q Consensus         7 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p   86 (215)
                      .....+||+.|+|||.+.+..|+.++|+||+||.++++.  .|.++|......               .+...+..+. |
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyeml--tG~~PF~~~~~~---------------~~~~~i~~~~-~  220 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML--IGQSPFHGQDEE---------------ELFHSIRMDN-P  220 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH--HSSCSSCCSSHH---------------HHHHHHHHCC-C
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHH--hCCCCCCCCCHH---------------HHHHHHHcCC-C
Confidence            345578888888888888888888888888888888884  466666421100               0111222232 2


Q ss_pred             ccccccchhHHHHHHHhhcCCCCCCCcccCC-ccCCCcchhhh
Q psy18117         87 FFSKHISLNGLCKRIEMALFPPLPSGVLYSD-KTLHHPNIVEL  128 (215)
Q Consensus        87 ~~~~~~~~~~l~k~i~~~~~~~~~~~~~~~~-~~l~h~~iv~l  128 (215)
                      .+....+ .. ++.+....+...|..++.+. ..+.||++-.+
T Consensus       221 ~~p~~~s-~~-~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         221 FYPRWLE-KE-AKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             CCCTTSC-HH-HHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CCCccCC-HH-HHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            2222221 22 33334444556677776664 56689887653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=7.9e-11  Score=91.18  Aligned_cols=43  Identities=33%  Similarity=0.621  Sum_probs=25.5

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|||||.+.+..|+.++|+||+||.++++  +.|.++|
T Consensus       196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyem--ltG~~Pf  238 (350)
T d1rdqe_         196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM--AAGYPPF  238 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH--HHSSCSS
T ss_pred             ccccCccccCCHHHHcCCCCCccccccchhHHHHHH--HhCCCCC
Confidence            445666666666666665566666666666666666  2354444

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.02  E-value=1.1e-10  Score=89.08  Aligned_cols=35  Identities=37%  Similarity=0.792  Sum_probs=17.9

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|||||.+.+..|+.++|+||+|+.++++
T Consensus       160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyem  194 (316)
T d1fota_         160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM  194 (316)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             cccCcccccCHHHHcCCCCCchhhccccchhHHHH
Confidence            44555555555555444455555555555555555

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.2e-11  Score=93.80  Aligned_cols=47  Identities=38%  Similarity=0.735  Sum_probs=39.5

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ....+.+||+.|||||.+.+..|+.++|+||+||.++++  ..|.++|.
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~l--ltg~~Pf~  214 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGYPPFY  214 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHH--TTSSCSCE
T ss_pred             CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHH--hhCCCCCC
Confidence            344678899999999999988899999999999999999  45777764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.00  E-value=5.6e-11  Score=92.04  Aligned_cols=43  Identities=23%  Similarity=0.435  Sum_probs=25.6

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      .+.+||+.|||||++.+..|+.++|+||+|+.++++.  .|.++|
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell--~G~~Pf  225 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL--SGLSPF  225 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHH--HSSCSS
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHH--hCCCCC
Confidence            3456666666666666655666666666666666663  355444

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=7.4e-11  Score=89.16  Aligned_cols=36  Identities=28%  Similarity=0.697  Sum_probs=20.8

Q ss_pred             cccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117          9 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      .+.+||+.|+|||.+.+..++.++|+||+|+.++++
T Consensus       174 ~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyel  209 (293)
T d1jksa_         174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  209 (293)
T ss_dssp             SCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             cccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHH
Confidence            345555566666655555555555666666655555

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=98.95  E-value=2e-10  Score=88.99  Aligned_cols=45  Identities=22%  Similarity=0.455  Sum_probs=31.8

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYM   54 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~   54 (215)
                      ..+.+||+.|||||.+.+..|+.++|+||+||.++++  +.|.++|.
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel--ltG~~Pf~  229 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL--LSGLSPFA  229 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH--HHSCCSSC
T ss_pred             eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHH--HhCCCCCC
Confidence            3456777777777777777777777777777777777  34655553

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=5.4e-10  Score=84.51  Aligned_cols=63  Identities=24%  Similarity=0.422  Sum_probs=46.1

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCC
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      +..||+.|++||.+.+..++.++|+||+|++++||+++..|++........+.+.+.....+.
T Consensus       195 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~  257 (299)
T d1ywna1         195 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR  257 (299)
T ss_dssp             SCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC
T ss_pred             ceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            357999999999999988999999999999999999876543333333344455555544333

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.8e-10  Score=86.11  Aligned_cols=40  Identities=30%  Similarity=0.598  Sum_probs=20.6

Q ss_pred             cCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCc
Q psy18117         48 LGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPF   87 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~   87 (215)
                      .||+.|++||.+... .|+.++|+||+||+++||++|+.||
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf  201 (299)
T d1ua2a_         161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL  201 (299)
T ss_dssp             CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCC
Confidence            455555555554432 2444555555555555555555444

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.86  E-value=5.5e-10  Score=86.78  Aligned_cols=36  Identities=39%  Similarity=0.793  Sum_probs=19.5

Q ss_pred             cccccCccccccccccc-CCCCcccchhhhhHHHHHh
Q psy18117          9 DSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~-~~~~~~~~~~s~g~~~~e~   44 (215)
                      .+.+||+.|||||.+.. ..|+.++|+||+||.++++
T Consensus       163 ~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyem  199 (364)
T d1omwa3         163 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL  199 (364)
T ss_dssp             CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH
T ss_pred             cccccccccchhHHhhcCCCCCcccchhHHHHHHHHH
Confidence            34455555555555542 3455555555555555555

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=84.88  Aligned_cols=120  Identities=18%  Similarity=0.273  Sum_probs=66.8

Q ss_pred             ccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCChHH------HhhCCCCCCccchh-hHHHHHHH
Q psy18117          8 VDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSPER------LKELKYSFPSDVWS-LGCVLYEM   80 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~pe~------~~~~~~~~~~diws-~g~~l~e~   80 (215)
                      ....+||+.|+|||.+.+..++.++|+||+||.++++  ..|.++|...+.      +.........+.|. ......+.
T Consensus       175 ~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~el--l~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  252 (355)
T d2b1pa1         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM--VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY  252 (355)
T ss_dssp             ------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH--HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHH
T ss_pred             cccccccccccChhhhcCCCCCCCcccccccchHHHH--hhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHH
Confidence            3567889999999999888888899999999999998  456676643321      11111122233332 22233333


Q ss_pred             HhcCCCcccccc-----------------chhHHHHHHHhhcCCCCCCCcccCCccCCCcchhhhh
Q psy18117         81 VALQSPFFSKHI-----------------SLNGLCKRIEMALFPPLPSGVLYSDKTLHHPNIVELR  129 (215)
Q Consensus        81 ~~g~~p~~~~~~-----------------~~~~l~k~i~~~~~~~~~~~~~~~~~~l~h~~iv~l~  129 (215)
                      .....++.....                 ....-+..+....+...|..++.+.+.++||++....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             hhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            333222211000                 0011123344456677889999999999999987643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=2.1e-09  Score=80.65  Aligned_cols=61  Identities=25%  Similarity=0.337  Sum_probs=46.7

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      ..||+.|+|||.+....++.++|+||+|++++|+++++.|++... ...++.+.+.....++
T Consensus       173 ~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~-~~~~~~~~i~~~~~~~  233 (283)
T d1mqba_         173 GKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLP  233 (283)
T ss_dssp             -CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHHHTTCCCC
T ss_pred             CCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccC-CHHHHHHHHhccCCCC
Confidence            568999999999988889999999999999999999877766543 3345555555544333

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=4.7e-10  Score=85.73  Aligned_cols=35  Identities=31%  Similarity=0.603  Sum_probs=18.4

Q ss_pred             ccccCcccccccccccCCCCcccchhhhhHHHHHh
Q psy18117         10 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEV   44 (215)
Q Consensus        10 ~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~   44 (215)
                      +.+||+.|+|||.+.+..|+.++|+||+|+.++++
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~l  196 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVL  196 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHH
Confidence            34455555555555544455555555555555555

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.75  E-value=3e-09  Score=79.48  Aligned_cols=43  Identities=33%  Similarity=0.703  Sum_probs=25.8

Q ss_pred             cccccCccccccccccc------CCCCcccchhhhhHHHHHhhcccCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE------LKYSFPSDVWSLGCVLYEVDSFLGTPYY   53 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~------~~~~~~~~~~s~g~~~~e~~~~~gt~~y   53 (215)
                      +..+||+.|+|||.+.+      ..++.++|+||+|+.++++.  .|.++|
T Consensus       167 ~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml--~g~~Pf  215 (277)
T d1phka_         167 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL--AGSPPF  215 (277)
T ss_dssp             CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH--HSSCSS
T ss_pred             eeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc--cCCCCC
Confidence            44666777777776642      33556666666666666663  355554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.6e-09  Score=82.57  Aligned_cols=41  Identities=32%  Similarity=0.567  Sum_probs=21.6

Q ss_pred             cCCCCCCChHHHhhC-CCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         48 LGTPYYMSPERLKEL-KYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~-~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      .||+.|++||.+... .++.++|+||+|++++|+++|+.||.
T Consensus       182 ~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~  223 (318)
T d3blha1         182 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ  223 (318)
T ss_dssp             CSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCC
Confidence            455555555555432 34455555555555555555555543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.74  E-value=1.3e-09  Score=82.21  Aligned_cols=45  Identities=24%  Similarity=0.227  Sum_probs=38.0

Q ss_pred             cccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         46 SFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        46 ~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      +..||+.|+|||.+.+..++.++|+||+|++++|+++|+.||...
T Consensus       172 ~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~  216 (293)
T d1csna_         172 NLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  216 (293)
T ss_dssp             CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCc
Confidence            357899999999888877888889999999999999998888643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.74  E-value=1.7e-09  Score=80.84  Aligned_cols=46  Identities=41%  Similarity=0.742  Sum_probs=36.2

Q ss_pred             hcccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         45 DSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        45 ~~~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      .+..||+.|++||.+.+..++.++|+||+|+++++|++|+.||...
T Consensus       172 ~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  217 (277)
T d1o6ya_         172 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  217 (277)
T ss_dssp             -------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc
Confidence            4468999999999998888999999999999999999999998654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.7e-09  Score=79.80  Aligned_cols=60  Identities=23%  Similarity=0.293  Sum_probs=45.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      ..||+.|+|||.+....++.++|+||+|++++|+++ |+.||...  +..++...+.....++
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~--~~~~~~~~i~~~~~~~  230 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--KGSEVTAMLEKGERMG  230 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--CHHHHHHHHHTTCCCC
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC--CHHHHHHHHHcCCCCC
Confidence            468899999999988888899999999999999997 78888643  3345555555544333

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=7.9e-09  Score=76.55  Aligned_cols=58  Identities=24%  Similarity=0.358  Sum_probs=42.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..||+.|++||.+....|+.++|+||+|++++|+++++.|++... ...++...+....
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-~~~~~~~~i~~~~  219 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGF  219 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-CHHHHHHHHHHTC
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-CHHHHHHHHHhcC
Confidence            578999999999998889999999999999999999766665443 3344555555443

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4e-09  Score=79.13  Aligned_cols=61  Identities=25%  Similarity=0.244  Sum_probs=46.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPL  109 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~  109 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++ |+.||....  ..++...+.....++.
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~--~~~~~~~i~~~~~~~~  233 (285)
T d1u59a_         172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRMEC  233 (285)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCCCCC
T ss_pred             cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCCC
Confidence            468889999999988889999999999999999987 788886543  3445555555444433

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=6.6e-09  Score=77.37  Aligned_cols=58  Identities=21%  Similarity=0.294  Sum_probs=45.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++++.|++... ...++...+....
T Consensus       170 ~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~-~~~~~~~~i~~~~  227 (272)
T d1qpca_         170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGY  227 (272)
T ss_dssp             CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-CHHHHHHHHHTTC
T ss_pred             cCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhcC
Confidence            578999999999988889999999999999999999777766543 3344445554443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=8.7e-09  Score=78.42  Aligned_cols=62  Identities=23%  Similarity=0.335  Sum_probs=44.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPLP  110 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~~  110 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++ |+.||...  ...++...+.....++.|
T Consensus       173 ~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~--~~~~~~~~i~~~~~~~~p  235 (317)
T d1xkka_         173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSILEKGERLPQP  235 (317)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CGGGHHHHHHHTCCCCCC
T ss_pred             cccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCCCC
Confidence            468999999999998889999999999999999998 55666433  234455555555444333

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.7e-09  Score=77.77  Aligned_cols=60  Identities=27%  Similarity=0.391  Sum_probs=44.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      ..||+.|++||.+....++.++|+||+|++++||++ |..||....  ..++...+.....++
T Consensus       169 ~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~--~~~~~~~i~~~~~~~  229 (273)
T d1mp8a_         169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENGERLP  229 (273)
T ss_dssp             --CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCCCC
T ss_pred             eecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCCCC
Confidence            568899999999999999999999999999999987 666775432  334555555444333

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=5.3e-09  Score=78.92  Aligned_cols=43  Identities=42%  Similarity=0.679  Sum_probs=29.6

Q ss_pred             ccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.... ++.++|+||+|+++++|++|+.||..
T Consensus       162 ~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~  205 (298)
T d1gz8a_         162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG  205 (298)
T ss_dssp             CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCC
Confidence            35777777777765554 35567777777777777777777653

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.5e-09  Score=80.96  Aligned_cols=45  Identities=27%  Similarity=0.760  Sum_probs=30.3

Q ss_pred             cccccCccccccccccc-CCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          9 DSFLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~-~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      ++.+||+.|+|||.+.+ ..++.++|+||+|+.++++  +.|.++|..
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~el--l~g~~pf~~  221 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM--ITGKTLFKG  221 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHH--HHSSCSSCC
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHH--HHCcCCCCC
Confidence            45677777777777654 3456777777777777777  346666643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6e-09  Score=79.60  Aligned_cols=45  Identities=33%  Similarity=0.488  Sum_probs=39.3

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++||++ |+.||....
T Consensus       226 ~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         226 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             EEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            467999999999999999999999999999999997 788886543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.67  E-value=2.6e-09  Score=80.64  Aligned_cols=43  Identities=28%  Similarity=0.247  Sum_probs=31.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFS   89 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~   89 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++|+++|+.||..
T Consensus       173 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~  215 (299)
T d1ckia_         173 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  215 (299)
T ss_dssp             CCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             cCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccc
Confidence            4677777777777766677777777777777777777777754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=7.8e-09  Score=78.03  Aligned_cols=57  Identities=25%  Similarity=0.441  Sum_probs=42.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++ |+.||...  ...++...+....
T Consensus       193 ~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~--~~~~~~~~i~~~~  250 (299)
T d1jpaa_         193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--TNQDVINAIEQDY  250 (299)
T ss_dssp             ---CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHHTTC
T ss_pred             ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCC
Confidence            457889999999988889999999999999999997 78888644  2344555555443

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.1e-09  Score=77.75  Aligned_cols=59  Identities=29%  Similarity=0.539  Sum_probs=42.8

Q ss_pred             hhcccCCCCCCChHHHhhC---CCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHh
Q psy18117         44 VDSFLGTPYYMSPERLKEL---KYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEM  103 (215)
Q Consensus        44 ~~~~~gt~~y~~pe~~~~~---~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~  103 (215)
                      ..+..||+.|+|||.+...   .|+.++|+||+|++++|+++|+.||.... ....+...+..
T Consensus       163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~-~~~~~~~~~~~  224 (276)
T d1uwha_         163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIFMVGR  224 (276)
T ss_dssp             ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC-hHHHHHHHHhc
Confidence            3456899999999998643   36778999999999999999999986543 23344444443

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=7.7e-09  Score=79.78  Aligned_cols=42  Identities=38%  Similarity=0.686  Sum_probs=22.7

Q ss_pred             ccCCCCCCChHHHhh-CCCCCCccchhhHHHHHHHHhcCCCcc
Q psy18117         47 FLGTPYYMSPERLKE-LKYSFPSDVWSLGCVLYEMVALQSPFF   88 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~-~~~~~~~diws~g~~l~e~~~g~~p~~   88 (215)
                      ..||+.|++||.+.+ ..++.++|+||+||+++|+++|+.||.
T Consensus       182 ~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~  224 (350)
T d1q5ka_         182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  224 (350)
T ss_dssp             CCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             ccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCC
Confidence            345555555555443 234555555555555555555555553

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.5e-08  Score=74.93  Aligned_cols=61  Identities=30%  Similarity=0.427  Sum_probs=44.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALFPPL  109 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~~~~  109 (215)
                      ..+++.|++||.+.+..++.++|+||+|++++|+++ |+.|+...  ...++...+.....++.
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i~~~~~~~~  221 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGYKMDA  221 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTCCCCC
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCCCCCC
Confidence            578899999999998889999999999999999998 45555432  33455555555444443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.1e-08  Score=77.55  Aligned_cols=61  Identities=28%  Similarity=0.378  Sum_probs=46.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFP  107 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~  107 (215)
                      ..||+.|++||.+....++.++|+||+|++++||++++.|++........+.+.+.....+
T Consensus       207 ~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~  267 (311)
T d1t46a_         207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM  267 (311)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC
T ss_pred             cccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC
Confidence            5789999999999988899999999999999999987666665544444444444444433

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.9e-08  Score=74.26  Aligned_cols=58  Identities=22%  Similarity=0.330  Sum_probs=44.9

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHHhhcC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIEMALF  106 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~~~~~  106 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++ |+.||...  +..++...+.....
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~--~~~~~~~~i~~~~~  219 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--TNSETAEHIAQGLR  219 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS--CHHHHHHHHHTTCC
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC--CHHHHHHHHHhCCC
Confidence            568889999999998889999999999999999997 67777543  33455555555433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.61  E-value=1.9e-08  Score=75.87  Aligned_cols=62  Identities=19%  Similarity=0.242  Sum_probs=46.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPL  109 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~  109 (215)
                      ..||+.|++||.+....++.++|+||+|++++|++++..|++... ...++...+.....++.
T Consensus       202 ~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~-~~~e~~~~v~~~~~~~~  263 (301)
T d1lufa_         202 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVIYYVRDGNILAC  263 (301)
T ss_dssp             CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHHHHHHHHHTTCCCCC
T ss_pred             CCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC-CHHHHHHHHHcCCCCCC
Confidence            568899999999999999999999999999999999875443333 33455555555444433

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=1.7e-08  Score=75.73  Aligned_cols=58  Identities=24%  Similarity=0.386  Sum_probs=45.2

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..|++.|++||.+....|+.++|+||+|++++|+++++.|++... +..++.+.+....
T Consensus       176 ~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~-~~~~~~~~i~~~~  233 (287)
T d1opja_         176 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY  233 (287)
T ss_dssp             EEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTC
T ss_pred             ccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc-hHHHHHHHHhcCC
Confidence            357889999999999889999999999999999999887776544 3345555554443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.6e-09  Score=79.68  Aligned_cols=46  Identities=28%  Similarity=0.708  Sum_probs=33.5

Q ss_pred             ccccccCcccccccccc-cCCCCcccchhhhhHHHHHhhcccCCCCCCC
Q psy18117          8 VDSFLGTPYYMSPERLK-ELKYSFPSDVWSLGCVLYEVDSFLGTPYYMS   55 (215)
Q Consensus         8 ~~~~~g~~~~~~p~~~~-~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~   55 (215)
                      ..+.+||+.|+|||.+. ...++.++|+||+|+.++++  +.|.++|..
T Consensus       169 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~em--l~g~~pf~~  215 (345)
T d1pmea_         169 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM--LSNRPIFPG  215 (345)
T ss_dssp             TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHH--HHSSCSCCC
T ss_pred             eccccccceechHHHhhcCCCCCchhhhhccCceehHH--hhCCCCCCC
Confidence            45677888888888874 34567788888888888888  456666643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=98.60  E-value=1.5e-08  Score=75.83  Aligned_cols=44  Identities=36%  Similarity=0.591  Sum_probs=34.9

Q ss_pred             ccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+.+.. ++.++|+||+|++++|+++|+.||...
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~  204 (286)
T d1ob3a_         160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV  204 (286)
T ss_dssp             --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC
Confidence            46888999999887654 578889999999999999998888543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=8.3e-09  Score=79.45  Aligned_cols=30  Identities=7%  Similarity=0.090  Sum_probs=21.5

Q ss_pred             HHhhcCCCCCCCcccCCccCCCcchhhhhh
Q psy18117        101 IEMALFPPLPSGVLYSDKTLHHPNIVELRS  130 (215)
Q Consensus       101 i~~~~~~~~~~~~~~~~~~l~h~~iv~l~~  130 (215)
                      +....+...|.+++.+.+.++||++.++.+
T Consensus       280 li~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         280 LLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence            334445566777888888899999887654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=2.1e-08  Score=77.47  Aligned_cols=49  Identities=24%  Similarity=0.497  Sum_probs=38.3

Q ss_pred             ccccccccCcccccccccccCCCCcccchhhhhHHHHHhhcccCCCCCCCh
Q psy18117          6 SSVDSFLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEVDSFLGTPYYMSP   56 (215)
Q Consensus         6 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~s~g~~~~e~~~~~gt~~y~~p   56 (215)
                      ....+.+||+.|+|||.+....++.++|+||+|+.++++  ..|+++|...
T Consensus       184 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el--~~g~~pF~~~  232 (362)
T d1q8ya_         184 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL--ITGDFLFEPD  232 (362)
T ss_dssp             BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH--HHSSCCC---
T ss_pred             cccccccccccccChhhccccCCCccccccchHHHHHHH--HHCCCCCCCC
Confidence            344678899999999999888899999999999999988  4577777543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=4.1e-08  Score=73.50  Aligned_cols=58  Identities=19%  Similarity=0.272  Sum_probs=44.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++++.|++.... ..++...+....
T Consensus       174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-~~~~~~~i~~~~  231 (285)
T d1fmka3         174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVERGY  231 (285)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHHTTC
T ss_pred             ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-HHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998777765543 344444454443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=3.7e-08  Score=74.60  Aligned_cols=58  Identities=26%  Similarity=0.368  Sum_probs=43.6

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhc
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMAL  105 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~  105 (215)
                      ..||+.|++||.+....++.++|+||+|++++||+++..|++... +..++...+....
T Consensus       186 ~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-~~~~~~~~i~~~~  243 (309)
T d1fvra_         186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-TCAELYEKLPQGY  243 (309)
T ss_dssp             --CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-CHHHHHHHGGGTC
T ss_pred             eecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-CHHHHHHHHHhcC
Confidence            468999999999999889999999999999999999876544332 3445555554443

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=4.9e-08  Score=73.54  Aligned_cols=60  Identities=30%  Similarity=0.435  Sum_probs=45.0

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhc-CCCccccccchhHHHHHHHhhcCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVAL-QSPFFSKHISLNGLCKRIEMALFPP  108 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g-~~p~~~~~~~~~~l~k~i~~~~~~~  108 (215)
                      ..||+.|++||.+.+..|+.++|+||+|++++|++++ ..||...  ...++...+.....+.
T Consensus       197 ~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~--~~~~~~~~i~~~~~~~  257 (299)
T d1fgka_         197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV--PVEELFKLLKEGHRMD  257 (299)
T ss_dssp             SCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CHHHHHHHHHTTCCCC
T ss_pred             CCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCC--CHHHHHHHHHcCCCCC
Confidence            5788999999999999999999999999999999984 5555433  3345555555544343

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.6e-08  Score=75.85  Aligned_cols=44  Identities=36%  Similarity=0.639  Sum_probs=32.5

Q ss_pred             ccCCCCCCChHHHhhCC--CCCCccchhhHHHHHHHHhcCCCcccc
Q psy18117         47 FLGTPYYMSPERLKELK--YSFPSDVWSLGCVLYEMVALQSPFFSK   90 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~--~~~~~diws~g~~l~e~~~g~~p~~~~   90 (215)
                      ..|++.|++||.+....  ++.++|+||+||++++|++|+.||...
T Consensus       190 ~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~  235 (322)
T d1vzoa_         190 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  235 (322)
T ss_dssp             GGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             cccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            56888888888876543  455678888888888888888887543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.6e-08  Score=75.21  Aligned_cols=38  Identities=29%  Similarity=0.540  Sum_probs=27.3

Q ss_pred             cccccCcccccccccccCC------CCcccchhhhhHHHHHhhc
Q psy18117          9 DSFLGTPYYMSPERLKELK------YSFPSDVWSLGCVLYEVDS   46 (215)
Q Consensus         9 ~~~~g~~~~~~p~~~~~~~------~~~~~~~~s~g~~~~e~~~   46 (215)
                      .+.+||+.|||||.+.+..      ++.++|+||+|+.++|+.+
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~t  213 (303)
T d1vjya_         170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR  213 (303)
T ss_dssp             --CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhh
Confidence            4578888888888876542      4556788888888888854

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.8e-08  Score=74.44  Aligned_cols=44  Identities=34%  Similarity=0.677  Sum_probs=26.9

Q ss_pred             cCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         48 LGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        48 ~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      .+++.|++||.+.... ++.++|+||+|++++||++|+.||+...
T Consensus       162 ~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~  206 (292)
T d1unla_         162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN  206 (292)
T ss_dssp             CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS
T ss_pred             ccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCC
Confidence            3455666666665443 4556677777777777777666665443

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.47  E-value=3.5e-08  Score=75.30  Aligned_cols=45  Identities=38%  Similarity=0.874  Sum_probs=27.1

Q ss_pred             ccCCCCCCChHHHhhCC-CCCCccchhhHHHHHHHHhcCCCccccc
Q psy18117         47 FLGTPYYMSPERLKELK-YSFPSDVWSLGCVLYEMVALQSPFFSKH   91 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~-~~~~~diws~g~~l~e~~~g~~p~~~~~   91 (215)
                      ..||+.|++||.+.+.. ++.++|+||+|++++++++|+.||....
T Consensus       189 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~  234 (328)
T d3bqca1         189 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH  234 (328)
T ss_dssp             CCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCc
Confidence            34666666666655433 4556666666666666666666665443

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=5.3e-08  Score=73.75  Aligned_cols=57  Identities=23%  Similarity=0.349  Sum_probs=42.4

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhh
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMA  104 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~  104 (215)
                      ..||+.|++||.+....++.++|+||+|++++|+++++.||..... ..++...+..+
T Consensus       194 ~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-~~~~~~~i~~g  250 (311)
T d1r0pa_         194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYLLQG  250 (311)
T ss_dssp             SSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTT
T ss_pred             ccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-HHHHHHHHHcC
Confidence            4688999999999999999999999999999999998888765432 23333444433

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2.3e-07  Score=70.04  Aligned_cols=63  Identities=30%  Similarity=0.383  Sum_probs=46.5

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHhcCCCccccccchhHHHHHHHhhcCCCCC
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVALQSPFFSKHISLNGLCKRIEMALFPPLP  110 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~g~~p~~~~~~~~~~l~k~i~~~~~~~~~  110 (215)
                      ..||+.|++||.+.+..++.++|+||+|++++||+++..+++... +..++...+.....++.|
T Consensus       195 ~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-~~~~~~~~i~~~~~~~~p  257 (308)
T d1p4oa_         195 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGLLDKP  257 (308)
T ss_dssp             SEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CHHHHHHHHHTTCCCCCC
T ss_pred             eecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHhCCCCCCc
Confidence            468999999999999889989999999999999999865544333 344555555554444333

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.5e-07  Score=69.83  Aligned_cols=54  Identities=28%  Similarity=0.464  Sum_probs=40.8

Q ss_pred             ccCCCCCCChHHHhhCCCCCCccchhhHHHHHHHHh-cCCCccccccchhHHHHHHH
Q psy18117         47 FLGTPYYMSPERLKELKYSFPSDVWSLGCVLYEMVA-LQSPFFSKHISLNGLCKRIE  102 (215)
Q Consensus        47 ~~gt~~y~~pe~~~~~~~~~~~diws~g~~l~e~~~-g~~p~~~~~~~~~~l~k~i~  102 (215)
                      ..|++.|++||.+.+..++.++|+||+|++++||++ |+.||...  +..++...+.
T Consensus       174 ~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~--~~~~~~~~i~  228 (273)
T d1u46a_         174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL--NGSQILHKID  228 (273)
T ss_dssp             --CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC--CHHHHHHHHH
T ss_pred             cccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc--CHHHHHHHHH
Confidence            357788999999998888888999999999999997 78887543  3334444443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.45  E-value=0.0022  Score=45.85  Aligned_cols=27  Identities=7%  Similarity=-0.085  Sum_probs=23.5

Q ss_pred             CCccccccchhhhhhhccceeeccccc
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      ..++|+|+.|.|||++.++.+-|+|+.
T Consensus       175 ~~liHgD~~~~Nvl~~~~~~~~iID~~  201 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENGRFSGFIDCG  201 (255)
T ss_dssp             EEEECSSCCGGGEEEETTEEEEECCCT
T ss_pred             ceEEeCCCCCcceEEeCCceEEEEEch
Confidence            347999999999999988888899975

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.27  E-value=0.0042  Score=45.96  Aligned_cols=28  Identities=14%  Similarity=0.152  Sum_probs=25.1

Q ss_pred             hCCccccccchhhhhhhccceeeccccc
Q psy18117        187 SRRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      ..|+||.|+.+.||+++.+++.=|.||.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~  209 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFY  209 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCT
T ss_pred             ccccccCCcchhhhhcccccceeEeccc
Confidence            3689999999999999999888899985

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.79  E-value=0.0099  Score=42.40  Aligned_cols=26  Identities=12%  Similarity=0.003  Sum_probs=22.9

Q ss_pred             Cccccccchhhhhhhccceeeccccc
Q psy18117        189 RILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       189 ~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      .++|+|+.|.|||+++++..-|.|+.
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe  209 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLG  209 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCT
T ss_pred             EEEEeeccCcceeecCCceEEEeech
Confidence            47999999999999988777799974

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=91.95  E-value=0.017  Score=44.07  Aligned_cols=26  Identities=8%  Similarity=0.059  Sum_probs=22.1

Q ss_pred             hCCccccccchhhhhhhccceeecccc
Q psy18117        187 SRRILHRGERETFLSVLGDCVRTVSEQ  213 (215)
Q Consensus       187 ~~~i~HrDikp~Nil~~~~~~~ki~D~  213 (215)
                      ...++|+|+.|.|||++.++ ++|+|+
T Consensus       222 ~~~LiHGDl~~gNIlv~~~~-~~vID~  247 (392)
T d2pula1         222 AETLIHGDLHTGSIFASEHE-TKVIDP  247 (392)
T ss_dssp             CCEEECSCCCGGGEEECSSC-EEECCC
T ss_pred             CcceeccCCcCCceeEcCCc-eEEech
Confidence            35689999999999998765 788897

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=91.59  E-value=0.055  Score=39.96  Aligned_cols=25  Identities=8%  Similarity=-0.137  Sum_probs=20.0

Q ss_pred             CCccccccchhhhhhhccceeeccccc
Q psy18117        188 RRILHRGERETFLSVLGDCVRTVSEQA  214 (215)
Q Consensus       188 ~~i~HrDikp~Nil~~~~~~~ki~D~~  214 (215)
                      .++||+|+.|.|||++++ . .++||.
T Consensus       192 ~~liHgDlh~~NvL~~~~-~-~~IDFd  216 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRDG-P-MFVDLD  216 (325)
T ss_dssp             CEECCSSCSGGGEEESSS-E-EECCCT
T ss_pred             ceeecCCCCcccEEEeCC-c-eEEech
Confidence            478999999999999744 3 367985

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.73  E-value=0.083  Score=40.06  Aligned_cols=15  Identities=13%  Similarity=0.071  Sum_probs=12.8

Q ss_pred             ccccccchhhhhhhc
Q psy18117        190 ILHRGERETFLSVLG  204 (215)
Q Consensus       190 i~HrDikp~Nil~~~  204 (215)
                      ++|.|+++.|||+..
T Consensus       220 ~CHnDL~~~NiL~~~  234 (395)
T d1nw1a_         220 FCHNDLQEGNILLPK  234 (395)
T ss_dssp             EECSCCCGGGEEEEC
T ss_pred             EEecCCCcccEeecc
Confidence            479999999999843