Diaphorina citri psyllid: psy18191


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
MNRVVQAKARLESFVENSSQRCIKINLPKASHSPSSRPDQNYLRVSGFADLTQPPARGGFYPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTATDCSFK
ccccEEEcccccEEEEccccEEEEEccccccccccccccccEEECccEEcccccccccccccccEEEEEEccCCcccccEEEEECccccccccccEEEECccccccccccCCccccccccccccccccccccEEEcccccEEEcccccEEEEEEECcccccEEEEEEccCEEcccccccEEEcccccEEEEEEEccccccccEEEEEEEEEccccEEEEEEEEEEccccccccccccc
******AKARLESFVENSSQRCIKINL**************YLRVSGFADLTQPPARGGFYPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKIS********
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MNRVVQAKARLESFVENSSQRCIKINLPKASHSPSSRPDQNYLRVSGFADLTQPPARGGFYPKPICLRFQDLLPQSKQGLMYLVGSQASPDYPNRFSLCNNKTWQKGLPLKKYHPPSLPLFPGVHGDGYRVPRITEHPASAVVPRHEPTTLNCKADGYPEPRIEWYKDGSLVSAEIGSHRILLPAGSLFFLSLVHGKKDTDSGVYWCVARNELGFARSKNATLDVAGKISTATDCSFK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Roundabout homolog 2 Receptor for SLIT2, and probably SLIT1, which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development.confidentQ7TPD3
Roundabout homolog 2 Receptor for SLIT2, and probably SLIT1, which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development.confidentQ9HCK4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009649 [BP]entrainment of circadian clockprobableGO:0009605, GO:0050896, GO:0042752, GO:0065007, GO:0008150, GO:0050789
GO:0005887 [CC]integral to plasma membraneprobableGO:0031226, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459, GO:0031224
GO:0043025 [CC]neuronal cell bodyprobableGO:0005575, GO:0097458, GO:0044297, GO:0005623, GO:0044464
GO:0044295 [CC]axonal growth coneprobableGO:0044464, GO:0044463, GO:0030427, GO:0030426, GO:0005623, GO:0030424, GO:0005575, GO:0097458, GO:0043005, GO:0033267, GO:0042995
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0008201 [MF]heparin bindingprobableGO:0043168, GO:1901681, GO:0097367, GO:0043167, GO:0005539, GO:0003674, GO:0005488
GO:0016199 [BP]axon midline choice point recognitionprobableGO:0008037, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0007411, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0042330, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0006935, GO:0030182, GO:0009987, GO:0008038, GO:0044767, GO:0044763, GO:0007409, GO:0048731, GO:0042221, GO:0022008, GO:0032990, GO:0048858, GO:0040011, GO:0048699, GO:0009605, GO:0044707, GO:0050896, GO:0048856, GO:0007399, GO:0016198, GO:0032502, GO:0048812, GO:0008150
GO:0071666 [CC]Slit-Robo signaling complexprobableGO:0005575, GO:0032991, GO:0032992
GO:0031982 [CC]vesicleprobableGO:0005575, GO:0043226
GO:0016477 [BP]cell migrationprobableGO:0040011, GO:0048870, GO:0009987, GO:0006928, GO:0051674, GO:0044763, GO:0008150, GO:0051179, GO:0044699
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DMK, chain A
Confidence level:very confident
Coverage over the Query: 63-108,120-226
View the alignment between query and template
View the model in PyMOL
Template: 1Z7Z, chain I
Confidence level:very confident
Coverage over the Query: 65-230
View the alignment between query and template
View the model in PyMOL