Diaphorina citri psyllid: psy18197

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
MLFINCCVNGVPVKAFVDSGAQTTIMSAECAERCAIMRLIDTRWAGVAKGVGIQRIIGRIHMVQVVIEKDFLTTSLSILEEQPMDMLLGLDMLRRHQCCIDLKRNVLRIGTTGTETRFLSESELPVCARLTNGVDNALSFGALY
cEEEEEEEccEEEEEEEcccccEEEccHHHHHHccccEEEEccEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEEEcccccEEEEHHHHHHccEEEEccccEEEEccccCEECccccccccccccccccccccccccccc
MLFINCCVNGVPVKAFVDSGAQTTIMSAECAERCAIMRLIDTRWAGVAKGVGIQRIIGRIHMVQVVIEKDFLTTSLSILEEQPMDMLLGLDMLRRHQCCIDLKRNVLRIGTTGTETRFLSESELPVCARLTN************
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MLFINCCVNGVPVKAFVDSGAQTTIMSAECAERCAIMRLIDTRWAGVAKGVGIQRIIGRIHMVQVVIEKDFLTTSLSILEEQPMDMLLGLDMLRRHQCCIDLKRNVLRIGTTGTETRFLSESELPVCARLTNGVDNALSFGALY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein DDI1 homolog 2 confidentQ497D6
Protein DDI1 homolog 2 confidentA2ADY9
Protein DDI1 homolog 1 confidentA0JPP7

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043130 [MF]ubiquitin bindingprobableGO:0003674, GO:0032182, GO:0005488, GO:0005515
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3S8I, chain A
Confidence level:very confident
Coverage over the Query: 1-125
View the alignment between query and template
View the model in PyMOL