Diaphorina citri psyllid: psy1866


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
MMVLTSTPNNEAELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNPAMFQTPLVSPGLPSTNFLTRSLPSFLGTTPPLVTSLSSPSVSSNVPLPSSPPPVESTSQNFSPGQSPAEVSSPLQLTPVLDDSQIAKLADIAQQLVRALPHLEPKAQNSKKKICKDLEAVFQMSDEAVILKVKDNVHDSNLERITNKKYGRQLL
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHccccc
*********NEAELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNPAMFQTPLVSPGLPSTNFLTRSL**F***********************************************************IAKLADIAQQLVRAL************KICKDLEAVFQMSDEAVILKVKDNV**SNLERITNKK*GRQ**
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MMVLTSTPNNEAELQLYRVMQRASLLAYYDTLLEMGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWTTNPAMFQTPLVSPGLPSTNFLTRSLPSFLGTTPPLVTSLSSPSVSSNVPLPSSPPPVESTSQNFSPGQSPAEVSSPLQLTPVLDDSQIAKLADIAQQLVRALPHLEPKAQNSKKKICKDLEAVFQMSDEAVILKVKDNVHDSNLERITNKKYGRQLL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
NGFI-A-binding protein 1 Acts as a transcriptional repressor for zinc finger transcription factors EGR1 and EGR2.confidentQ13506
NGFI-A-binding protein 1 Acts as a transcriptional repressor for zinc finger transcription factors EGR1 and EGR2.confidentQ61122

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YUF, chain A
Confidence level:confident
Coverage over the Query: 156-227
View the alignment between query and template
View the model in PyMOL
Template: 1V85, chain A
Confidence level:probable
Coverage over the Query: 13-82
View the alignment between query and template
View the model in PyMOL