Diaphorina citri psyllid: psy187

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS
cccccEEEEEEccccccEEEEEEECcccccEEEECccccccccccccccccccccccccccHHccccccccccccccccccEEEcccccccccccHHHHccccccccccEEEEEEcccccccccccccccccCEEEEEEEccccccccccccccccccccccccccEEccccHHHHHHccccccccccccccHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccEEEEEEEEEcccccccccccccccccccEEEcccccccccCEccEEEEcccEEEEEEcccccEEEEEccccccccEEEEEEEECcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHEEEEEEEEEEccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
*DMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVM***********KSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQ***************MSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLD**********************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Extracellular serine/threonine protein kinase FAM20C Calcium-binding protein which may play a role in dentin mineralization.confidentQ5MJS3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0030126 [CC]COPI vesicle coatprobableGO:0012506, GO:0043229, GO:0030117, GO:0005622, GO:0030135, GO:0043226, GO:0030137, GO:0005737, GO:0005575, GO:0030660, GO:0030663, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0044431, GO:0031982, GO:0048475, GO:0005794, GO:0005798, GO:0030659, GO:0012505, GO:0043227, GO:0030120, GO:0031090, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0000139, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0005793 [CC]endoplasmic reticulum-Golgi intermediate compartmentprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3AKJ, chain A
Confidence level:probable
Coverage over the Query: 203-287
View the alignment between query and template
View the model in PyMOL