Psyllid ID: psy187

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS
cccccEEEEEEccccccEEEEEEEEcccccEEEEEccccccccccccccccccccccccccHHccccccccccccccccccEEEcccccccccccHHHHccccccccccEEEEEEcccccccccccccccccEEEEEEEEccccccccccccccccccccccccccEEcccHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccEEEEEEEEEcccccccccccccccccccEEEcccccccccEEccEEEEcccEEEEEEcccccEEEEEccccccccEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHEEEEEEEEEEccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
ccHHHHHHHHcccccccHHHHHHHccccccHEEcccccccccccccccccEccccHHcHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHcHHHHHHHEEcccccEEEEEEEcccccccccEcccccccccHHHHEcccccHccccccccccccccccccccEEcccccHHHHHcccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHcccccEEEEEccccccccccccccHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
MDMAVLDFLIGNMdrhhyetfkafdnetfpihlvkhsrfprdqqtlpnhfyftdyerhnseIATFHLDRLLgfrrampvtgrlcnitseiyplvdgellktffvspgnnicfhgkcsyycdtshavcgnpdmlegsyaaflpdksvaerkvwrhpwrrsYHKRRKaqwehdadycdivreippynqgrrllDLMDMAVLDFLIGNmdrhhyetfkvstdadycdivreippynqgrrllDLMDMAVLDFLIGNMdrhhyetfkafdnetfpihldhgrgfgrayHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYmdfqvgdepqlpgvgeHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFasrnerqfhngpkKLSEAMVESmsrdpiapilwqphldALDRRVKIILQAIRHCIEVrldkptenppltilptariklpprs
MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHsrfprdqqtlPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLpdksvaerkvwrhpwrrsyhkrrkaqwehdadycDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFkvstdadycdIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFasrnerqfhngPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIevrldkptenppltilptariklpprs
MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS
***AVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVM***********KSLNTIIDYQTHHRL**********DLNERVMWWSSIEFVVVLLASTLQVYIVKNFFAS*************************IAPILWQPHLDALDRRVKIILQAIRHCIEVRLD**********************
*DMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGE**********************IDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQ***************MSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVR************************
MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRR***********HDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS
*DMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKL****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEFVVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPPLTILPTARIKLPPRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query493 2.2.26 [Sep-21-2011]
Q5MJS3579 Extracellular serine/thre yes N/A 0.454 0.386 0.542 4e-82
Q8IXL6584 Extracellular serine/thre yes N/A 0.592 0.5 0.450 5e-81
Q96MK3541 Protein FAM20A OS=Homo sa no N/A 0.462 0.421 0.440 1e-63
Q8CID3541 Protein FAM20A OS=Mus mus no N/A 0.462 0.421 0.444 5e-63
Q8VCS3409 Glycosaminoglycan xylosyl no N/A 0.405 0.488 0.408 2e-50
Q5RH51409 Glycosaminoglycan xylosyl no N/A 0.515 0.621 0.358 6e-50
O75063409 Glycosaminoglycan xylosyl no N/A 0.405 0.488 0.404 2e-49
Q9Y3Q3217 Transmembrane emp24 domai no N/A 0.215 0.488 0.570 3e-28
Q78IS1221 Transmembrane emp24 domai no N/A 0.215 0.479 0.570 3e-28
Q6AY25221 Transmembrane emp24 domai no N/A 0.215 0.479 0.570 4e-28
>sp|Q5MJS3|DMP4_MOUSE Extracellular serine/threonine protein kinase FAM20C OS=Mus musculus GN=Fam20c PE=2 SV=1 Back     alignment and function desciption
 Score =  305 bits (782), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 148/273 (54%), Positives = 180/273 (65%), Gaps = 49/273 (17%)

Query: 33  LVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYP 92
           L K  +  R+Q+T P+ FYF+DYERHN+EIA FHLDR+L FRR  PV GR+ N+T EI  
Sbjct: 278 LFKPMKQTREQETPPDFFYFSDYERHNAEIAAFHLDRILDFRRVPPVAGRMINMTKEIRD 337

Query: 93  LV-DGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKV 151
           +  D +L +TFFVSP NNICF+G+CSYYC T HA+CG PD +EGS AAFLPD S+A+RK 
Sbjct: 338 VTRDKKLWRTFFVSPANNICFYGECSYYCSTEHALCGRPDQIEGSLAAFLPDLSLAKRKT 397

Query: 152 WRHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHY 211
           WR+PWRRSYHKR+KA+WE D DYC+ V++ PPY+ G R+LD+MDM V DFL+GNMDRHHY
Sbjct: 398 WRNPWRRSYHKRKKAEWEVDPDYCEEVKQTPPYDSGHRILDIMDMTVFDFLMGNMDRHHY 457

Query: 212 ETFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFP 271
           ETF                                                + F NETF 
Sbjct: 458 ETF------------------------------------------------EKFGNETFI 469

Query: 272 IHLDHGRGFGRAYHDELSILAPILQCCLIRERT 304
           IHLD+GRGFG+  HDELSILAP+ QCC IR  T
Sbjct: 470 IHLDNGRGFGKYSHDELSILAPLHQCCRIRRST 502
Calcium-binding protein which may play a role in dentin mineralization.
Mus musculus (taxid: 10090)
>sp|Q8IXL6|DMP4_HUMAN Extracellular serine/threonine protein kinase FAM20C OS=Homo sapiens GN=FAM20C PE=1 SV=2 Back     alignment and function description
>sp|Q96MK3|FA20A_HUMAN Protein FAM20A OS=Homo sapiens GN=FAM20A PE=1 SV=4 Back     alignment and function description
>sp|Q8CID3|FA20A_MOUSE Protein FAM20A OS=Mus musculus GN=Fam20a PE=1 SV=1 Back     alignment and function description
>sp|Q8VCS3|XYLK_MOUSE Glycosaminoglycan xylosylkinase OS=Mus musculus GN=Fam20b PE=2 SV=1 Back     alignment and function description
>sp|Q5RH51|XYLK_DANRE Glycosaminoglycan xylosylkinase OS=Danio rerio GN=fam20b PE=2 SV=1 Back     alignment and function description
>sp|O75063|XYLK_HUMAN Glycosaminoglycan xylosylkinase OS=Homo sapiens GN=FAM20B PE=1 SV=1 Back     alignment and function description
>sp|Q9Y3Q3|TMED3_HUMAN Transmembrane emp24 domain-containing protein 3 OS=Homo sapiens GN=TMED3 PE=1 SV=1 Back     alignment and function description
>sp|Q78IS1|TMED3_MOUSE Transmembrane emp24 domain-containing protein 3 OS=Mus musculus GN=Tmed3 PE=2 SV=1 Back     alignment and function description
>sp|Q6AY25|TMED3_RAT Transmembrane emp24 domain-containing protein 3 OS=Rattus norvegicus GN=Tmed3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
340724987 1014 PREDICTED: hypothetical protein LOC10064 0.464 0.225 0.671 1e-111
350398269512 PREDICTED: dentin matrix protein 4-like 0.464 0.447 0.675 1e-110
328782804520 PREDICTED: dentin matrix protein 4-like 0.466 0.442 0.665 1e-109
383865737513 PREDICTED: dentin matrix protein 4-like 0.464 0.446 0.664 1e-109
195113455 1028 GI10702 [Drosophila mojavensis] gi|19391 0.464 0.222 0.660 1e-107
195390379 1049 GJ23118 [Drosophila virilis] gi|19415193 0.464 0.218 0.657 1e-107
195036954 1063 GH19066 [Drosophila grimshawi] gi|193894 0.464 0.215 0.646 1e-106
194745891 1027 GF18751 [Drosophila ananassae] gi|190628 0.464 0.222 0.657 1e-106
312380304549 hypothetical protein AND_07683 [Anophele 0.464 0.417 0.671 1e-105
195451511 1042 GK13411 [Drosophila willistoni] gi|19416 0.464 0.219 0.646 1e-105
>gi|340724987|ref|XP_003400857.1| PREDICTED: hypothetical protein LOC100646682 [Bombus terrestris] Back     alignment and taxonomy information
 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 186/277 (67%), Positives = 209/277 (75%), Gaps = 48/277 (17%)

Query: 33  LVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYP 92
           L K  RFPR+QQTLPNHFYFTD+ERH +EIA FHLDRLLGFRRAMPVTGR  N+T+EIY 
Sbjct: 719 LFKPMRFPREQQTLPNHFYFTDFERHTAEIAAFHLDRLLGFRRAMPVTGRTLNLTTEIYQ 778

Query: 93  LVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVW 152
           + DGELLKTFFVSP  NICFHGKCSYYCDT+HA+CGNPD LEGS+AAFLPDKS   RK W
Sbjct: 779 IADGELLKTFFVSPAGNICFHGKCSYYCDTAHAICGNPDTLEGSFAAFLPDKSFVARKAW 838

Query: 153 RHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYE 212
           RHPWRRSYHKR+KAQWEHD+DYC +V+EIPPY++GRRLLDLMDMAVLDFL+GNMDRHHYE
Sbjct: 839 RHPWRRSYHKRKKAQWEHDSDYCSLVKEIPPYHEGRRLLDLMDMAVLDFLMGNMDRHHYE 898

Query: 213 TFKVSTDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPI 272
           TFK+                                                F N TFP+
Sbjct: 899 TFKI------------------------------------------------FGNNTFPL 910

Query: 273 HLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLL 309
           HLDHGRGFGRA+HDE+SILAPILQCC+IR+ TL+TLL
Sbjct: 911 HLDHGRGFGRAFHDEISILAPILQCCMIRQTTLSTLL 947

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350398269|ref|XP_003485142.1| PREDICTED: dentin matrix protein 4-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|328782804|ref|XP_393996.4| PREDICTED: dentin matrix protein 4-like [Apis mellifera] Back     alignment and taxonomy information
>gi|383865737|ref|XP_003708329.1| PREDICTED: dentin matrix protein 4-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|195113455|ref|XP_002001283.1| GI10702 [Drosophila mojavensis] gi|193917877|gb|EDW16744.1| GI10702 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195390379|ref|XP_002053846.1| GJ23118 [Drosophila virilis] gi|194151932|gb|EDW67366.1| GJ23118 [Drosophila virilis] Back     alignment and taxonomy information
>gi|195036954|ref|XP_001989933.1| GH19066 [Drosophila grimshawi] gi|193894129|gb|EDV92995.1| GH19066 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|194745891|ref|XP_001955418.1| GF18751 [Drosophila ananassae] gi|190628455|gb|EDV43979.1| GF18751 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|312380304|gb|EFR26337.1| hypothetical protein AND_07683 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|195451511|ref|XP_002072955.1| GK13411 [Drosophila willistoni] gi|194169040|gb|EDW83941.1| GK13411 [Drosophila willistoni] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query493
FB|FBgn0051145980 CG31145 [Drosophila melanogast 0.373 0.187 0.788 3.1e-104
RGD|1311980579 Fam20c "family with sequence s 0.371 0.316 0.646 6.5e-81
MGI|MGI:2136853579 Fam20c "family with sequence s 0.371 0.316 0.646 6.5e-81
UNIPROTKB|E1C4X0555 E1C4X0 "Uncharacterized protei 0.371 0.329 0.646 8.3e-81
UNIPROTKB|Q8IXL6584 FAM20C "Extracellular serine/t 0.371 0.313 0.630 3.6e-80
UNIPROTKB|F1MXQ3552 FAM20C "Uncharacterized protei 0.371 0.331 0.635 4.1e-79
ZFIN|ZDB-GENE-070705-319507 si:dkey-179j5.2 "si:dkey-179j5 0.371 0.360 0.576 7.7e-70
WB|WBGene00010356512 H03A11.1 [Caenorhabditis elega 0.375 0.361 0.556 7.7e-66
UNIPROTKB|E1BU21524 FAM20A "Uncharacterized protei 0.369 0.347 0.551 8.7e-65
UNIPROTKB|F1Q2V7407 FAM20A "Uncharacterized protei 0.369 0.447 0.540 7.7e-64
FB|FBgn0051145 CG31145 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 830 (297.2 bits), Expect = 3.1e-104, Sum P(3) = 3.1e-104
 Identities = 145/184 (78%), Positives = 161/184 (87%)

Query:    33 LVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGFRRAMPVTGRLCNITSEIYP 92
             L+K  RFPR+QQTLPNHFYFTDYERHN+EIA FHLDR+LGFRRAMPV GR  NIT+EIY 
Sbjct:   686 LMKPMRFPREQQTLPNHFYFTDYERHNAEIAAFHLDRILGFRRAMPVAGRTLNITTEIYQ 745

Query:    93 LVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVW 152
             L +  LLKTFFVSP  N+CFHGKCSYYCDTSHA+CGNPDMLEGS+AAFLP+     RK+W
Sbjct:   746 LAEENLLKTFFVSPSLNLCFHGKCSYYCDTSHAICGNPDMLEGSFAAFLPNFESGNRKLW 805

Query:   153 RHPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYE 212
             RHPWRRSYHKR+KAQWE DA+YC +VR+IPPY+ GRRL DLMDMAV DFL GNMDRHHYE
Sbjct:   806 RHPWRRSYHKRKKAQWETDANYCALVRDIPPYDDGRRLYDLMDMAVFDFLTGNMDRHHYE 865

Query:   213 TFKV 216
             TFKV
Sbjct:   866 TFKV 869
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
GO:0005576 "extracellular region" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0004672 "protein kinase activity" evidence=IDA
RGD|1311980 Fam20c "family with sequence similarity 20, member C" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2136853 Fam20c "family with sequence similarity 20, member C" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4X0 E1C4X0 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IXL6 FAM20C "Extracellular serine/threonine protein kinase FAM20C" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXQ3 FAM20C "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070705-319 si:dkey-179j5.2 "si:dkey-179j5.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00010356 H03A11.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E1BU21 FAM20A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q2V7 FAM20A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5MJS3DMP4_MOUSENo assigned EC number0.54210.45430.3868yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
pfam06702221 pfam06702, DUF1193, Protein of unknown function (D 7e-94
cd10314209 cd10314, FAM20_C, C-terminal putative kinase domai 8e-91
cd10467210 cd10467, FAM20_C_like, C-terminal putative kinase 3e-86
cd10471212 cd10471, FAM20C_C, C-terminal putative kinase doma 2e-78
cd10469217 cd10469, FAM20A_C, C-terminal putative kinase doma 4e-59
cd10470206 cd10470, FAM20B_C, C-terminal putative kinase doma 4e-54
pfam01105178 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOL 2e-26
cd10314209 cd10314, FAM20_C, C-terminal putative kinase domai 2e-17
pfam06702221 pfam06702, DUF1193, Protein of unknown function (D 6e-16
cd10314209 cd10314, FAM20_C, C-terminal putative kinase domai 2e-15
pfam06702221 pfam06702, DUF1193, Protein of unknown function (D 5e-15
cd10467210 cd10467, FAM20_C_like, C-terminal putative kinase 1e-14
cd10467210 cd10467, FAM20_C_like, C-terminal putative kinase 1e-13
cd10471212 cd10471, FAM20C_C, C-terminal putative kinase doma 7e-12
cd10471212 cd10471, FAM20C_C, C-terminal putative kinase doma 2e-11
cd10469217 cd10469, FAM20A_C, C-terminal putative kinase doma 6e-10
cd10470206 cd10470, FAM20B_C, C-terminal putative kinase doma 3e-08
cd10469217 cd10469, FAM20A_C, C-terminal putative kinase doma 2e-07
cd10470206 cd10470, FAM20B_C, C-terminal putative kinase doma 3e-07
>gnl|CDD|219144 pfam06702, DUF1193, Protein of unknown function (DUF1193) Back     alignment and domain information 
 Score =  283 bits (726), Expect = 7e-94
 Identities = 115/208 (55%), Positives = 130/208 (62%), Gaps = 48/208 (23%)

Query: 102 FFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWRHPWRRSYH 161
           FF SP NN CF+GKCSYYC T HAVCGNPDMLEGS AAFLPD S+A RK WR PWRRSY 
Sbjct: 1   FFTSPANNTCFYGKCSYYCKTEHAVCGNPDMLEGSLAAFLPDLSLAPRKKWRSPWRRSYS 60

Query: 162 KRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDAD 221
           +R+ A+WE                                                TD +
Sbjct: 61  RRKLAEWE------------------------------------------------TDPN 72

Query: 222 YCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFG 281
           YCD V++ PPY+ G RLLDL+DMA+ DFLIGNMDRHHYETF+ F NETF +HLD+GRGFG
Sbjct: 73  YCDTVKQTPPYDSGTRLLDLIDMAIFDFLIGNMDRHHYETFEKFGNETFLLHLDNGRGFG 132

Query: 282 RAYHDELSILAPILQCCLIRERTLNTLL 309
           R  HDELSILAP+ QCCLIR  T   L 
Sbjct: 133 RPSHDELSILAPLYQCCLIRRSTWLRLQ 160

This family represents the C-terminus of several hypothetical eukaryotic proteins of unknown function. Family members contain two conserved motifs: DRHHYE and QCC, as well as a number of conserved cysteine residues. Length = 221
>gnl|CDD|198457 cd10314, FAM20_C, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20) proteins Back     alignment and domain information
>gnl|CDD|198458 cd10467, FAM20_C_like, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins Back     alignment and domain information
>gnl|CDD|198462 cd10471, FAM20C_C, C-terminal putative kinase domain of FAM20C (also known as Dentin Matrix Protein 4, DMP4) Back     alignment and domain information
>gnl|CDD|198460 cd10469, FAM20A_C, C-terminal putative kinase domain of FAM20A Back     alignment and domain information
>gnl|CDD|198461 cd10470, FAM20B_C, C-terminal putative kinase domain of FAM20B xylose kinase Back     alignment and domain information
>gnl|CDD|216301 pfam01105, EMP24_GP25L, emp24/gp25L/p24 family/GOLD Back     alignment and domain information
>gnl|CDD|198457 cd10314, FAM20_C, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20) proteins Back     alignment and domain information
>gnl|CDD|219144 pfam06702, DUF1193, Protein of unknown function (DUF1193) Back     alignment and domain information
>gnl|CDD|198457 cd10314, FAM20_C, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20) proteins Back     alignment and domain information
>gnl|CDD|219144 pfam06702, DUF1193, Protein of unknown function (DUF1193) Back     alignment and domain information
>gnl|CDD|198458 cd10467, FAM20_C_like, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins Back     alignment and domain information
>gnl|CDD|198458 cd10467, FAM20_C_like, C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins Back     alignment and domain information
>gnl|CDD|198462 cd10471, FAM20C_C, C-terminal putative kinase domain of FAM20C (also known as Dentin Matrix Protein 4, DMP4) Back     alignment and domain information
>gnl|CDD|198462 cd10471, FAM20C_C, C-terminal putative kinase domain of FAM20C (also known as Dentin Matrix Protein 4, DMP4) Back     alignment and domain information
>gnl|CDD|198460 cd10469, FAM20A_C, C-terminal putative kinase domain of FAM20A Back     alignment and domain information
>gnl|CDD|198461 cd10470, FAM20B_C, C-terminal putative kinase domain of FAM20B xylose kinase Back     alignment and domain information
>gnl|CDD|198460 cd10469, FAM20A_C, C-terminal putative kinase domain of FAM20A Back     alignment and domain information
>gnl|CDD|198461 cd10470, FAM20B_C, C-terminal putative kinase domain of FAM20B xylose kinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 493
KOG3829|consensus486 100.0
PF06702221 DUF1193: Protein of unknown function (DUF1193); In 100.0
KOG1692|consensus201 99.96
KOG1691|consensus210 99.95
KOG1690|consensus215 99.93
KOG1693|consensus209 99.92
KOG3287|consensus236 99.92
PF01105183 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro 99.85
PF06702221 DUF1193: Protein of unknown function (DUF1193); In 99.66
KOG3829|consensus486 99.43
PF15051326 FAM198: FAM198 protein 97.47
>KOG3829|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.1e-110  Score=852.36  Aligned_cols=310  Identities=55%  Similarity=1.007  Sum_probs=295.3

Q ss_pred             hhHHHHhcccccccc---------ceee-eeccCCCceeecccCCCCCCcccCCCcccccccccccchhhhhhhhhhcCC
Q psy187            4 AVLDFLIGNMDRHHY---------ETFK-AFDNETFPIHLVKHSRFPRDQQTLPNHFYFTDYERHNSEIATFHLDRLLGF   73 (493)
Q Consensus         4 ~~~~~~~~~~~~~~y---------~~f~-~~~~~~~~~a~fkp~~~~r~~~~~~~~~~~~~~~rhn~ei~afhl~~~l~~   73 (493)
                      ..+|.|+|.|++.++         ++.| +++|+|+||||||||||+||++|+|+  ||+||||||||||||||||||||
T Consensus       151 ~~~~alL~~l~~~pI~~v~v~~~GtqLKlll~~~~~~KavfKPmR~~Rd~~~~~~--yfs~~dRHnAEiAAFHLDRiL~F  228 (486)
T KOG3829|consen  151 QSMGALLHALRTEPITRVSVLGRGTQLKLLLRLSHQQKVVFKPMRYPRDEVIDGM--YYSGFDRHNAEVAAFHLDRVLDF  228 (486)
T ss_pred             hhHHHHHHHhhcCcceEEeecCCceEEEEEEEecCCceeeeccccCCccccCCCc--ccccccccchhhhhhhhhhhhcc
Confidence            568899999999999         3899 89999999999999999999999999  88999999999999999999999


Q ss_pred             cCCCcccccccccccccccccchhhhccccccCCCCeeeeeecccccCCCCccccCCCccccceeeccCCcccccccccc
Q psy187           74 RRAMPVTGRLCNITSEIYPLVDGELLKTFFVSPGNNICFHGKCSYYCDTSHAVCGNPDMLEGSYAAFLPDKSVAERKVWR  153 (493)
Q Consensus        74 ~r~~~~~gr~~~~t~ei~~~~~~~l~~t~~~~~~~~~C~y~~c~y~C~~~~~~cg~~~~~e~s~~~~lp~~~~~~~~~~r  153 (493)
                      ||+||||||+||||+||+++|+++|++|||+||++|.||||||+|||+|+|++||+|+++|||+++|||+.+.++|+.||
T Consensus       229 rRappvVGRvvNlttEI~~~a~~~LlqtfFvsp~~N~CF~gKC~YyC~t~~avCg~pdmlEGS~~~fLP~~~~~prk~~r  308 (486)
T KOG3829|consen  229 RRAPPVVGRVVNLTTEIYEKAEEELLQTFFVSPAENYCFFGKCDYYCDTEEAVCGDPDMLEGSLIAFLPDESTLPRKHRR  308 (486)
T ss_pred             cccCcccceeeeeehHHHHhhHHHHHhheeeccCcceEEeeccccccCCcccccCCcccccceEEEEcCCcccccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcchhhhhhhhhcccCCccccccccCCCCCccchhhhhhhHHHHhhhcCCccccccceecccCCccccceeeccCCCC
Q psy187          154 HPWRRSYHKRRKAQWEHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVREIPPYN  233 (493)
Q Consensus       154 ~p~~r~y~~~~~~~we~~~~yc~~~~~~~~~~~~~~ll~~~d~~i~~fl~g~~~rh~ye~~~~~~de~~C~lV~~~p~~~  233 (493)
                      |||+|||++.+||+||+|++||+.||+++||++|+||||+|||+|||||+|||||||||+|++++|              
T Consensus       309 ~Pw~RtY~~~k~a~WE~d~~YCd~VK~~~pY~~g~RLlDliD~aIfDyLiGN~DRHHYEtF~~f~d--------------  374 (486)
T KOG3829|consen  309 SPWRRTYKKDKKAEWEDDMNYCDKVKSIKPYDEGRRLLDLIDMAIFDYLIGNMDRHHYETFEVFGD--------------  374 (486)
T ss_pred             CccccccccccccccccchHHHHHhcccCccccchhHHHHHHHHHHHHHhcccchhhhhhhhccCC--------------
Confidence            999999999999999999999999999999999999999999999999999999999987776653              


Q ss_pred             cCCccccccceEEEecccCCccccccceeeecCCcceeeecCCCCCCCccccccccccccceeEEeeecccccccccCcc
Q psy187          234 QGRRLLDLMDMAVLDFLIGNMDRHHYETFKAFDNETFPIHLDHGRGFGRAYHDELSILAPILQCCLIRERTLNTLLNNEF  313 (493)
Q Consensus       234 ~gsrlldlid~~ViD~liGN~Diih~e~~~~~G~~~Fta~~dG~k~~g~~~~g~~si~aGeY~fCF~n~st~~~~FdN~f  313 (493)
                                                        .+|.+|.|+||+||+++|++.+|+++.|++|+...+|..       
T Consensus       375 ----------------------------------~s~~ihLDngr~FGrp~~De~sILaPL~QCCliRkST~~-------  413 (486)
T KOG3829|consen  375 ----------------------------------LSFLIHLDNGRAFGRPSHDELSILAPLYQCCLIRKSTWD-------  413 (486)
T ss_pred             ----------------------------------cceEEEeccccccCCCCcchHHHHHHHHhhheeeHHHHH-------
Confidence                                              246788999999999999999999999999998887731       


Q ss_pred             cccccEEEEEEEEeCCCCCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy187          314 STYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKSLNTIIDYQTHHRLREAQGRKRAEDLNERVMWWSSIEF  393 (493)
Q Consensus       314 St~s~K~V~FdI~VG~ea~d~~~iakke~Ld~LE~~L~rL~~~L~~I~~EQ~ylR~RE~r~R~t~ESTNsRV~~wSIlqI  393 (493)
                                                                                                      
T Consensus       414 --------------------------------------------------------------------------------  413 (486)
T KOG3829|consen  414 --------------------------------------------------------------------------------  413 (486)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHHHHhHHHHHHHHHHHhhccccccccCccchHHHHHHhhccCCCCCCCchhhHHHHHHhHHHHHHHHHHHHHhhCC
Q psy187          394 VVVLLASTLQVYIVKNFFASRNERQFHNGPKKLSEAMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLD  471 (493)
Q Consensus       394 lVLI~vai~QV~yLKrFFkkKK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (493)
                                           +.+.+++||+.||++|.|||+.||++||||+|||+|+||||.+||++|++||+.+|+
T Consensus       414 ---------------------~L~~f~~gpk~Lt~~l~esl~qDp~sPvLt~pHl~A~dRRl~~Il~tV~~C~~~~g~  470 (486)
T KOG3829|consen  414 ---------------------RLQVFSNGPKVLTEALDESLSQDPLSPVLTDPHLKAVDRRLLVILATVEHCIDIEGD  470 (486)
T ss_pred             ---------------------HHHHHhcCChhHHHHHHHHhccCCCCcccccchHHHHHHHHHHHHHHHHHHHHhcCc
Confidence                                 122589999999999999999999999999999999999999999999999999998

>PF06702 DUF1193: Protein of unknown function (DUF1193); InterPro: IPR009581 This family is baesd on the C terminus of several hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG1692|consensus Back     alignment and domain information
>KOG1691|consensus Back     alignment and domain information
>KOG1690|consensus Back     alignment and domain information
>KOG1693|consensus Back     alignment and domain information
>KOG3287|consensus Back     alignment and domain information
>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins Back     alignment and domain information
>PF06702 DUF1193: Protein of unknown function (DUF1193); InterPro: IPR009581 This family is baesd on the C terminus of several hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG3829|consensus Back     alignment and domain information
>PF15051 FAM198: FAM198 protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query493
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
3akj_A325 CTKA; protein kinase, transferase; 2.00A {Helicoba 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 50/427 (11%), Positives = 111/427 (25%), Gaps = 154/427 (36%)

Query: 169 EHDADYCDIVREIPPYNQGRRLLDLMDMAVLDFLIGNMDRHHYETFKVSTDADYCDIVRE 228
           EH   Y DI+       +   + +     V D               + +  +   I+  
Sbjct: 13  EHQYQYKDIL----SVFEDAFVDNFDCKDVQDMPKS-----------ILSKEEIDHIIMS 57

Query: 229 IPPYNQGRRLLDLM--------DMAVLDFLIGN----MDRHHYET------FKAF----- 265
               +   RL   +           V + L  N    M     E        + +     
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117

Query: 266 ----DNETFPIH-----------------LD-------HG-RGFGRAYHDELSILAPILQ 296
               DN+ F  +                 L         G  G G+      + +A  L 
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK------TWVA--LD 169

Query: 297 CCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGDEPQLPGVGEHVTVMTQMESSTQEIHKS 356
            C     +       +F     K+ +++ +  + P+         V+  ++    +I  +
Sbjct: 170 VC----LSYKVQCKMDF-----KIFWLNLKNCNSPET--------VLEMLQKLLYQIDPN 212

Query: 357 LNTIIDYQTHHRLREAQGRKRAEDL-----------------NERVMWWSSIEF---VVV 396
             +  D+ ++ +LR    +     L                 N +   W++      +++
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA--WNAFNLSCKILL 270

Query: 397 L-----LASTLQVYIVKNFFASRNERQF-------------HNGPKKLSE---------- 428
                 +   L      +     +                    P+ L            
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 429 AMVESMSRDPIAPILWQPHLDALDRRVKIILQAIRHCIEVRLDKPTENPP----LTILPT 484
           +++    RD      W         ++  I+++    + V L+ P E       L++ P 
Sbjct: 331 SIIAESIRDG--LATWDNWKHVNCDKLTTIIES---SLNV-LE-PAEYRKMFDRLSVFP- 382

Query: 485 ARIKLPP 491
               +P 
Sbjct: 383 PSAHIPT 389
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3akj_A CTKA; protein kinase, transferase; 2.00A {Helicobacter pylori} PDB: 3akk_A* 3akl_A* Length = 325 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query493
d1olma2119 Supernatant protein factor (SPF), C-terminal domai 84.17
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All beta proteins
fold: Supernatant protein factor (SPF), C-terminal domain
superfamily: Supernatant protein factor (SPF), C-terminal domain
family: Supernatant protein factor (SPF), C-terminal domain
domain: Supernatant protein factor (SPF), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.17  E-value=0.35  Score=39.92  Aligned_cols=28  Identities=21%  Similarity=0.129  Sum_probs=24.4

Q ss_pred             ccceeEEeeecccccccccCcccccccEEEEEEEEeCC
Q psy187          292 APILQCCLIRERTLNTLLNNEFSTYSHKVVYMDFQVGD  329 (493)
Q Consensus       292 aGeY~fCF~n~st~~~~FdN~fSt~s~K~V~FdI~VG~  329 (493)
                      +|.|.+|          |||++|.+..|.|.+.|+|-.
T Consensus        84 ~G~Y~l~----------FDNs~S~~~sK~l~Y~i~v~~  111 (119)
T d1olma2          84 PGIYVLR----------FDNTYSFIHAKKVNFTVEVLL  111 (119)
T ss_dssp             CEEEEEE----------EECTTCCCCSEEEEEEEEEEC
T ss_pred             CEEEEEE----------EeCCcceEEeeEEEEEEEEEC
Confidence            3578887          999999999999999999854