Diaphorina citri psyllid: psy1890

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
MTEGVDGFRDHDGVKNLAKTPAKLWKDGLIYYEIDKNFSVDRKRFIVKALNNIMTFSCVRFRRRTHNQTPYIVYKESPNGKSCSSNVGFTGKKVSYVNLGKNCFVMGTVQHETLHALGFWHEQARPDRDRFVDIHYELIKKGSEINFKKRNFKEATTLDLPYDFGSIMHYSRFAFSRDSKSPTITPKKTLNVQADKMGQRINISKMDIAKLNTLYKCPNKYYKGRDVRHVKAVQSRPVKIQS
cccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccccEEEEEEccccccccccccccccccEEEEccccccccHHHHHHHHHHHHHccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccc
MTEGVDGFRDHDGVKNLAKTPAKLWKDGLIYYEIDKNFSVDRKRFIVKALNNIMTFSCVRFRRRTHNQTPYIVYKESPNGKSCSSNVGFTGKKVSYVNLGKNCFVMGTVQHETLHALGFWHEQARPDRDRFVDIHYELIKKGSEINFKKRNFKEATTLDLPYDFGSIMHYSRFAFSRDSKSPTITPKKTLNVQADKMGQRINISKMDIAKLNTLYKCPNKYYKGRDVR*V************
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MTEGVDGFRDHDGVKNLAKTPAKLWKDGLIYYEIDKNFSVDRKRFIVKALNNIMTFSCVRFRRRTHNQTPYIVYKESPNGKSCSSNVGFTGKKVSYVNLGKNCFVMGTVQHETLHALGFWHEQARPDRDRFVDIHYELIKKGSEINFKKRNFKEATTLDLPYDFGSIMHYSRFAFSRDSKSPTITPKKTLNVQADKMGQRINISKMDIAKLNTLYKCPNKYYKGRDVRHVKAVQSRPVKIQS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0046331 [BP]lateral inhibitionprobableGO:0032502, GO:0044700, GO:0045165, GO:0048869, GO:0030154, GO:0045168, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0009987, GO:0044699
GO:0050789 [BP]regulation of biological processprobableGO:0008150, GO:0065007
GO:0016020 [CC]membraneprobableGO:0005575
GO:0004222 [MF]metalloendopeptidase activityprobableGO:0016787, GO:0004175, GO:0003824, GO:0070011, GO:0003674, GO:0008233, GO:0008237
GO:0035188 [BP]hatchingprobableGO:0071684, GO:0032502, GO:0032501, GO:0044707, GO:0008150, GO:0007275, GO:0044699
GO:0006508 [BP]proteolysisprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EDH, chain A
Confidence level:very confident
Coverage over the Query: 17-219
View the alignment between query and template
View the model in PyMOL