Diaphorina citri psyllid: psy1940


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MLYLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW
cEEEEcccccCEECcccccccEEEccccccEEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEEcccccCEEEc
*LYLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW
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MLYLQCSQDLSSTELSSSSSPVTINAHQSELACLALNQTGTMIATASSKGTLIRVWDTLKKVQLVELRRGSDPATLYW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
WD repeat domain phosphoinositide-interacting protein 4 confidentQ91VM3
WD repeat domain phosphoinositide-interacting protein 4 confidentQ7ZUX3
WD repeat domain phosphoinositide-interacting protein 4 confidentQ9Y484

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0080025 [MF]phosphatidylinositol-3,5-bisphosphate bindingprobableGO:0043168, GO:0035091, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488, GO:1901981
GO:0032266 [MF]phosphatidylinositol-3-phosphate bindingprobableGO:0043168, GO:0035091, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488, GO:1901981
GO:0044765 [BP]single-organism transportprobableGO:0051234, GO:0006810, GO:0008150, GO:0051179, GO:0044699
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0010314 [MF]phosphatidylinositol-5-phosphate bindingprobableGO:0043168, GO:0035091, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488, GO:1901981
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0070273 [MF]phosphatidylinositol-4-phosphate bindingprobableGO:0043168, GO:0035091, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488, GO:1901981
GO:0034045 [CC]pre-autophagosomal structure membraneprobableGO:0005737, GO:0000407, GO:0016020, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0005776 [CC]autophagic vacuoleprobableGO:0005737, GO:0043231, GO:0005773, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000329 [CC]fungal-type vacuole membraneprobableGO:0005737, GO:0005575, GO:0000324, GO:0000323, GO:0000322, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005774, GO:0044446, GO:0044444, GO:0044437, GO:0043231, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000045 [BP]autophagic vacuole assemblyprobableGO:0009991, GO:0022607, GO:0008152, GO:0016236, GO:0044248, GO:0042594, GO:0044699, GO:0051716, GO:0016043, GO:0071840, GO:0071496, GO:0006914, GO:0009987, GO:0006950, GO:0044763, GO:0009267, GO:0007154, GO:0070925, GO:0009056, GO:0006996, GO:0007033, GO:0031668, GO:0031669, GO:0009605, GO:0050896, GO:0031667, GO:0044237, GO:0044085, GO:0033554, GO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VU4, chain A
Confidence level:very confident
Coverage over the Query: 21-78
View the alignment between query and template
View the model in PyMOL