Diaphorina citri psyllid: psy1987


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
MVKKRPLLVYPFDATLYCSQPELDQSYTYLSSRQVVDGASDDSLSAEDNDVKRSKRRDITLTRRPSYRKILNDLRGAEIATGKVESSGSDCDDSNLDSELSSHSLPTHYQTVIPAGHIHLSSQGGDHQTLPTITMTNASSAGGTIVQYSQDGQFFVPSEIGTGEDQSRKREMRLLKNREAAKECRRKKKEYIKCLENRVAILENQNKALIDELKSLKELYCQQEME
ccccccccccccccEEcccccccccccccccEEEEEccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
******LLVYPFDATLYCSQPELDQSYTYL******************************************************************************YQTVIPAGHIH***********************GTIVQYSQDGQFFV********************************KEYIKCLENRVAILENQNKALIDELKSLKELYC*****
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MVKKRPLLVYPFDATLYCSQPELDQSYTYLSSRQVVDGASDDSLSAEDNDVKRSKRRDITLTRRPSYRKILNDLRGAEIATGKVESSGSDCDDSNLDSELSSHSLPTHYQTVIPAGHIHLSSQGGDHQTLPTITMTNASSAGGTIVQYSQDGQFFVPSEIGTGEDQSRKREMRLLKNREAAKECxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxYCQQEME

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cyclic AMP-responsive element-binding protein 1 Phosphorylation-dependent transcription factor that stimulates transcription upon binding to the DNA cAMP response element (CRE), a sequence present in many viral and cellular promoters. Transcription activation is enhanced by the TORC coactivators which act independently of Ser-117 phosphorylation. Involved in different cellular processes including the synchronization of circadian rhythmicity and the differentiation of adipose cells.confidentP27925

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DH3, chain A
Confidence level:very confident
Coverage over the Query: 169-223
View the alignment between query and template
View the model in PyMOL
Template: 1KDX, chain B
Confidence level:confident
Coverage over the Query: 54-79
View the alignment between query and template
View the model in PyMOL