Diaphorina citri psyllid: psy198

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----

MRLRLHSFFTLGLFYHNAIALPSKMCSIVKVTDPKAALLAAQCLKKGCVVALPTDTLYGLACDATNSKAINILYEIKKRDVNKPLAICVSEITDIPKWADTHTVSFELLAELLPGPVTIVFNRSEHLNLELNPNVTKVAVRIPDHKFLRQLLKLMDSPLALTSANESNEPSTLCINEFQKLWSQLSVVIDGGIISNPERFGSTIVDLSEENVYSIVRKGVCYDKILKILHKYHLVEKNTFPIPVL

ccEEEEccEEEEEEEcccccccccccEEcccccHHHHHHHHHHHHccccEECccccHHHcccccccHHHHHHHHHHcccccccccEEEEcccccccccccccHHHHHHHHHcccccEEEEEcccccccccccccccEEEEEccccHHHHHHHHHccccEEccccccccccccccHHHHHcccccccEEEEccccccccccccEEEEcccccccEEEcccccHHHHHHHHcccccccccccccccc

***RLHSFFTLGLFYHNAIALPSKMCSIVKVTDPKAALLAAQCLKKGCVVALPTDTLYGLACDATNSKAINILYEIKKRDVNKPLAICVSEITDIPKWADTHTVSFELLAELLPGPVTIVFNRSEHLNLELNPNVTKVAVRIPDHKFLRQLLKLMDSPLALTSANESNEPSTLCINEFQKLWSQLSVVIDGGIISNPERFGSTIVDLSEENVYSIVRKGVCYDKILKILHKYHLVEK****IPVL

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
tRNA threonylcarbamoyladenosine biosynthesis protein RimN	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.	confident	B0U4N0
tRNA threonylcarbamoyladenosine biosynthesis protein RimN	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.	confident	Q8P4F2
tRNA threonylcarbamoyladenosine biosynthesis protein RimN	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.	confident	A8AQH7

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0016020 [CC]	membrane	probable	GO:0005575
GO:0051051 [BP]	negative regulation of transport	probable	GO:0051049, GO:0065007, GO:0008150, GO:0048519, GO:0032879, GO:0050789
GO:0005488 [MF]	binding	probable	GO:0003674

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VTH, chain A
Confidence level:very confident
Coverage over the Query: 33-242
View the alignment between query and template
View the model in PyMOL