Diaphorina citri psyllid: psy1995

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
MANPCIVPQKNQVDLGDNRWYNQHEHQLQLAKESEPELVFIGDSLISFLTQTQIWHNLFEPLHCLAFGIGGDKVEHCLWRVQDGILDSIKPKVIVILVGTNNTEDSAENIADGILELIRLVQTKQPQADVVVLELLPRGKLINKLWTKNLATNQILADKLSPAPLGPKVHLIQHNKDEIISKDEISQGDFYDYLHLTESGYRKVFTPVYEK
ccccccccccccccccccHHHHHHHHHHHHHccccccEEEEcccccccccccHHHHHHcccccEEEEccccccHHHHHHHHHccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccEEEEEECcccccccHHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHcc
**NPCIVPQKNQVDLGDNRWYNQHEHQLQLAKESEPELVFIGDSLISFLTQTQIWHNLFEPLHCLAFGIGGDKVEHCLWRVQDGILDSIKPKVIVILVGTNNTEDSAENIADGILELIRLVQTKQPQADVVVLELLPRGKLINKLWTKNLATNQILADKLSPAPLGPKVHLIQHNKDEIISKDEISQGDFYDYLHLTESGYRKVFTPVYEK
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MANPCIVPQKNQVDLGDNRWYNQHEHQLQLAKESEPELVFIGDSLISFLTQTQIWHNLFEPLHCLAFGIGGDKVEHCLWRVQDGILDSIKPKVIVILVGTNNTEDSAENIADGILELIRLVQTKQPQADVVVLELLPRGKLINKLWTKNLATNQILADKLSPAPLGPKVHLIQHNKDEIISKDEISQGDFYDYLHLTESGYRKVFTPVYEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Platelet-activating factor acetylhydrolase IB subunit beta homolog confidentQ9VXP4
Platelet-activating factor acetylhydrolase IB subunit beta Inactivates PAF by removing the acetyl group at the sn-2 position. This is a catalytic subunit.confidentQ5R4G2
Platelet-activating factor acetylhydrolase IB subunit beta Inactivates PAF by removing the acetyl group at the sn-2 position. This is a catalytic subunit.confidentQ61206

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmconfidentGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0046982 [MF]protein heterodimerization activityprobableGO:0046983, GO:0003674, GO:0005488, GO:0005515
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0007283 [BP]spermatogenesisprobableGO:0044702, GO:0048609, GO:0032504, GO:0019953, GO:0022414, GO:0032501, GO:0008150, GO:0044699, GO:0048232, GO:0007276, GO:0000003
GO:0003847 [MF]1-alkyl-2-acetylglycerophosphocholine esterase activityprobableGO:0016787, GO:0003674, GO:0016788, GO:0052689, GO:0003824
GO:0006928 [BP]cellular component movementprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699
GO:0016042 [BP]lipid catabolic processprobableGO:0044238, GO:1901575, GO:0006629, GO:0044710, GO:0071704, GO:0008150, GO:0008152, GO:0009056
GO:0007420 [BP]brain developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0047179 [MF]platelet-activating factor acetyltransferase activityprobableGO:0016740, GO:0003824, GO:0016407, GO:0016746, GO:0016747, GO:0003674
GO:0016239 [BP]positive regulation of macroautophagyprobableGO:0032106, GO:0032107, GO:0032104, GO:0032103, GO:0031329, GO:0032101, GO:0009896, GO:0048584, GO:0031323, GO:0009894, GO:0032109, GO:0010647, GO:0010646, GO:0050789, GO:0009893, GO:0019222, GO:0010508, GO:0065007, GO:0048518, GO:0010506, GO:0031325, GO:0016241, GO:0031331, GO:0048583, GO:0050794, GO:0008150, GO:0080134, GO:0080135, GO:0048522

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.471-alkyl-2-acetylglycerophosphocholine esterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1FXW, chain F
Confidence level:very confident
Coverage over the Query: 2-210
View the alignment between query and template
View the model in PyMOL