Diaphorina citri psyllid: psy19

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490----

MDLHKLVSTAQSDEKQITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVKELRGIDNILFIIATFENFGFSNKGTEEDSGQKDESDLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGVLYPSIEQFNKYNDILRHKKSIRNEINIKKESSCETEPQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTSMESERAFGGKLNDTYFWLVDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIVEFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKCRKQIKINMSGMKSFVFILNRTADLFDYAIHGLKEKHKGKPFPPRK

ccHHHHHccccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEccEEEEEEccccHHHHHHHccccEEEEEEEcccCCcccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccEEEEEEEECccccccHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHcccccccccccEEEccccccccccccCEEEEEcccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHcccccEEEEEEEEEccccEEEEEEEEEccccccccccccccccccccccccc

**************KQITIEATVVTGFEDVVVEECQEKFGKDLLLMKSIGRVFFNIDLKDIEKVKELRGIDNILFIIATFENFGFSNK************DLLKDKLKDVATIQNKVLEIDWKKYMEIWKQITNYNGV*********************************ETEPQVNNVQIEKGDLQNQELKEIDINSMCSSQNQKTNFTNPEENLLKFRVTCNRVGKHTVTSMESERAFGGKLNDTYFWLVDLDDYDIDINLQIRYNEAYVGLPVTQTSLHRRNIVEFNITTLKPTIAYNMVRLASPIPGDVFLDPMCGGGTIPVECSLSYPHTFFVCGDINEKLVLKTQANVLHNSGNLNRELKVSPLVCNVRQLCFKPACVDGIVTDLPFGKRVGSKSNNFLLYRLFLIEIGKIVRPQIGRAILLTSDRKHLIQALHITSALWKCRKQIKINMSGMKSFVFILNRTADLFDY******************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
THUMP domain-containing protein 3		confident	P97770
THUMP domain-containing protein 3		confident	Q9BV44
THUMP domain-containing protein 3		confident	Q2T9W2

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0003723 [MF]	RNA binding	probable	GO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3TMA, chain A
Confidence level:very confident
Coverage over the Query: 17-87,106-129,218-470
View the alignment between query and template
View the model in PyMOL