Diaphorina citri psyllid: psy2006


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKPLHHSP
cccccccccccEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccEEccccEEEEcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccHHHHccccccccEEEEccccccccccccEEEccccccccccccccccHHHHHHHHHcccccccccccccccHHccccccccccccccHHcccccccccccccccccccccccccEEECccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHcccEEcccccccccccccccccccccccccHHHHccccccccc
MCSLNCVASNHVCTNVVYEVDSVVALKIIKNVEKYREAARLEINALQKIGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAP*************LFDLISKMLEY**********ALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHGKLDWDEKGTAGRYVR***KPL****
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MCSLNCVASNHVCTNVVYEVDSVVALKIxxxxxxxxxxxxxxxxxxxxxGEKDPNGRHLCVKMLDWFDYHGHMCIAFEILGLSVFDFLKENNYLPYSLDQVRHMSYQLIYAKENNYLPYSLDQVRHMSYQLIYAVDYNNKKKREVRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPERYMASDDEEHRQLFDLISKMLEYEPSERISLSEALRHPFFDKLPSSVRVHAQTQADRILSSVSSLVMRRVRRCDIRLIDFGSATFDDEHHSTIVSTRHYRAPEVILELGWAQPCDVWSIGCIIFELYLGITLMARKTKTKYFYHGKLDWDEKGTAGRYVRENCKPLHHSP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dual specificity protein kinase CLK2 Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.confidentO35491
Dual specificity protein kinase CLK2 Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.confidentP49760

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0046777 [BP]protein autophosphorylationprobableGO:0044267, GO:0006468, GO:0044260, GO:0044238, GO:0019538, GO:0016310, GO:0009987, GO:0043412, GO:0006464, GO:0043170, GO:0071704, GO:0006796, GO:0036211, GO:0008150, GO:0044237, GO:0008152, GO:0006793
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0004713 [MF]protein tyrosine kinase activityprobableGO:0016773, GO:0016772, GO:0016301, GO:0003824, GO:0016740, GO:0003674, GO:0004672
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0043484 [BP]regulation of RNA splicingprobableGO:0080090, GO:0019222, GO:0060255, GO:0051252, GO:0031323, GO:0050794, GO:0050789, GO:0019219, GO:0065007, GO:0051171, GO:0008150, GO:0010468
GO:0018108 [BP]peptidyl-tyrosine phosphorylationprobableGO:0044267, GO:0006468, GO:0044260, GO:0044238, GO:0019538, GO:0016310, GO:0009987, GO:0018212, GO:0043412, GO:0006464, GO:0043170, GO:0071704, GO:0006796, GO:0036211, GO:0008150, GO:0018193, GO:0008152, GO:0006793, GO:0044237
GO:0032526 [BP]response to retinoic acidprobableGO:1901700, GO:0033993, GO:0050896, GO:0008150, GO:0042221, GO:0010033
GO:0010212 [BP]response to ionizing radiationprobableGO:0009314, GO:0050896, GO:0008150, GO:0009628
GO:0045111 [CC]intermediate filament cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0004674 [MF]protein serine/threonine kinase activityprobableGO:0016773, GO:0016772, GO:0016301, GO:0003824, GO:0016740, GO:0003674, GO:0004672

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Z57, chain A
Confidence level:very confident
Coverage over the Query: 2-111,135-165,246-321
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Template: 1WAK, chain A
Confidence level:very confident
Coverage over the Query: 2-111,135-161,194-202,222-223,234-322
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Template: 2EU9, chain A
Confidence level:very confident
Coverage over the Query: 149-229
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Template: 3HKO, chain A
Confidence level:very confident
Coverage over the Query: 2-158,252-323
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Template: 3UTO, chain A
Confidence level:very confident
Coverage over the Query: 2-111,135-157,251-347
View the alignment between query and template
View the model in PyMOL