Diaphorina citri psyllid: psy2064


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
cccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEECccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccEEEEEEcccEEEccccccccccCEECcccccEEECccccCEEEECcccCEECccccCCccccccccccccccccccccccEEccccccccccccEEEccccccccEEEEccccccccccccccccccc
**FNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSN**
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MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protocadherin-like wing polarity protein stan Involved in the fz signaling pathway that controls wing tissue polarity. Also mediates homophilic cell adhesion. May play a role in initiating prehair morphogenesis. May play a critical role in tissue polarity and in formation of normal dendrite fields.confidentQ9V5N8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005911 [CC]cell-cell junctionprobableGO:0005575, GO:0030054
GO:0090251 [BP]protein localization involved in establishment of planar polarityprobableGO:0032502, GO:0002009, GO:0033036, GO:0008104, GO:0048856, GO:0070727, GO:0060429, GO:0034613, GO:0009888, GO:0051179, GO:0044767, GO:0001738, GO:0007164, GO:0008150, GO:0048729, GO:0044763, GO:0009987, GO:0009653, GO:0001736, GO:0044699, GO:0051641
GO:0016020 [CC]membraneprobableGO:0005575
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0051963 [BP]regulation of synapse assemblyprobableGO:0019226, GO:0035637, GO:0050803, GO:0050807, GO:0051128, GO:0023052, GO:0050789, GO:0044699, GO:0065007, GO:0065008, GO:0032501, GO:0050793, GO:0050877, GO:0009987, GO:0050794, GO:0008150, GO:0051239, GO:0007268, GO:0007267, GO:0007154, GO:0003008, GO:0044700, GO:0044707, GO:0044087, GO:0051960, GO:2000026, GO:0044763
GO:0050770 [BP]regulation of axonogenesisprobableGO:0022604, GO:0010975, GO:0022603, GO:0030154, GO:0051128, GO:0050789, GO:0044699, GO:0050767, GO:0048869, GO:0060284, GO:0031344, GO:0045664, GO:0010769, GO:0065007, GO:0032502, GO:0032501, GO:0050793, GO:0009987, GO:0050794, GO:0045595, GO:0008150, GO:0051239, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0048856, GO:0044763, GO:0051960, GO:2000026, GO:0007275, GO:0048731

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4HTI, chain A
Confidence level:probable
Coverage over the Query: 16-87,105-118
View the alignment between query and template
View the model in PyMOL
Template: 1EMN, chain A
Confidence level:probable
Coverage over the Query: 116-173,196
View the alignment between query and template
View the model in PyMOL