Psyllid ID: psy2064

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
Secondary Structure (PSIPRED)
cccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccEEEEEEcccEEEccccccccccEEEEcccccEEEEccccEEEEEEcccEEEEccccEEccccccccccccccccccccccEEccccccccccccEEEccccccccEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccEEEEccccccccEccEEEcccccccccccccccccccccccccccEEEEEEEccccccccccccEEEEcccccccEEEEcccccccccccEEcccccc
Coil and Loop (DISEMBL)
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLaaiipcpreniylfsiqddtdvtSRILNVSfsarasdgtfyppqflQERVYLNRGILARLATVQERVYLNRGILARLATVQSAtlsidecdtelvvrhgstlgtfcantssyvldskevevlpfddnlcvqepclnyeQCVTVLKFgnasgfvasdsvlfrpiypvstfacvhpdkfydgldsilttsnva
Flexible Loop (DISEMBL)
mlfnsitvrlddmtKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFsarasdgtfyppQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
Low Complexity Region (SEG)
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
Disordered region (IsUnstruct)
****SITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL******
Disordered Region (DISOPRED)
**FNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASD**FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSN**
Disordered Region (DISEMBL)
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
Disordered Region (DISPRO)
*LFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9V5N8	3579	Protocadherin-like wing p	yes	N/A	0.742	0.045	0.551	8e-59
Q91ZI0	3301	Cadherin EGF LAG seven-pa	yes	N/A	0.701	0.046	0.371	2e-30
O88278	3313	Cadherin EGF LAG seven-pa	yes	N/A	0.701	0.046	0.371	2e-30
Q9NYQ7	3312	Cadherin EGF LAG seven-pa	yes	N/A	0.701	0.046	0.371	2e-30
O35161	3034	Cadherin EGF LAG seven-pa	no	N/A	0.683	0.049	0.333	7e-22
Q9NYQ6	3014	Cadherin EGF LAG seven-pa	no	N/A	0.683	0.050	0.328	2e-21
Q9QYP2	2144	Cadherin EGF LAG seven-pa	no	N/A	0.683	0.070	0.309	1e-15
Q9HCU4	2923	Cadherin EGF LAG seven-pa	no	N/A	0.683	0.051	0.309	2e-15
Q9R0M0	2920	Cadherin EGF LAG seven-pa	no	N/A	0.669	0.050	0.304	8e-14

>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila melanogaster GN=stan PE=1 SV=4

 Score =  226 bits (576), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+E+I++FSIQDDTDV+SRILNVS
Sbjct: 1317 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSRILNVS 1376

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1377 FSARRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1412

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1413 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1440

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1441 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1483

Involved in the fz signaling pathway that controls wing tissue polarity. Also mediates homophilic cell adhesion. May play a role in initiating prehair morphogenesis. May play a critical role in tissue polarity and in formation of normal dendrite fields.
Drosophila melanogaster (taxid: 7227)

>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus GN=Celsr3 PE=2 SV=2

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 55/210 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            +L NS+TVRL++M +E FLSPLL  F++G+AA++  P E++++F+IQ+DTDV   +LNVS
Sbjct: 1261 LLANSLTVRLENMWQERFLSPLLGHFLEGVAAVLATPTEDVFIFNIQNDTDVGGTVLNVS 1320

Query: 61   FSA---RASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA   R +      P F  E              +QE++Y+ R  LA            
Sbjct: 1321 FSALAPRGAGAGAAGPWFSSEE-------------LQEQLYVRRAALA------------ 1355

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                  +  +LD     VLPFDDN+C++EPC NY +CV+VL+F 
Sbjct: 1356 ----------------------ARSLLD-----VLPFDDNVCLREPCENYMKCVSVLRFD 1388

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKF 207
            +++ F+AS S LFRPI P++   C  P  F
Sbjct: 1389 SSAPFLASTSTLFRPIQPIAGLRCRCPPGF 1418

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Mus musculus (taxid: 10090)

>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus GN=Celsr3 PE=2 SV=1

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 55/210 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            +L NS+TVRL++M +E FLSPLL  F++G+AA++  P E++++F+IQ+DTDV   +LNVS
Sbjct: 1261 LLANSLTVRLENMWQERFLSPLLGHFLEGVAAVLATPTEDVFIFNIQNDTDVGGTVLNVS 1320

Query: 61   FSA---RASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA   R +      P F  E              +QE++Y+ R  LA            
Sbjct: 1321 FSALAPRGAGAGAAGPWFSSEE-------------LQEQLYVRRAALA------------ 1355

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                  +  +LD     VLPFDDN+C++EPC NY +CV+VL+F 
Sbjct: 1356 ----------------------ARSLLD-----VLPFDDNVCLREPCENYMKCVSVLRFD 1388

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKF 207
            +++ F+AS S LFRPI P++   C  P  F
Sbjct: 1389 SSAPFLASASTLFRPIQPIAGLRCRCPPGF 1418

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Rattus norvegicus (taxid: 10116)

>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens GN=CELSR3 PE=1 SV=2

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 114/210 (54%), Gaps = 55/210 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            +L NS+TVRL++M +E FLSPLL  F++G+AA++  P E++++F+IQ+DTDV   +LNVS
Sbjct: 1270 LLANSLTVRLENMWQERFLSPLLGRFLEGVAAVLATPAEDVFIFNIQNDTDVGGTVLNVS 1329

Query: 61   FSA---RASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA   R +      P F  E              +QE++Y+ R  LA            
Sbjct: 1330 FSALAPRGAGAGAAGPWFSSEE-------------LQEQLYVRRAALA------------ 1364

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                  +  +LD     VLPFDDN+C++EPC NY +CV+VL+F 
Sbjct: 1365 ----------------------ARSLLD-----VLPFDDNVCLREPCENYMKCVSVLRFD 1397

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKF 207
            +++ F+AS S LFRPI P++   C  P  F
Sbjct: 1398 SSAPFLASASTLFRPIQPIAGLRCRCPPGF 1427

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Homo sapiens (taxid: 9606)

>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus GN=Celsr1 PE=2 SV=3

 Score =  103 bits (258), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 59/210 (28%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            ML NSITVRL++M++E FLSPLL+ F++G+A ++   +++I++F+IQ+DTDV+S ILNV+
Sbjct: 1217 MLTNSITVRLENMSQEKFLSPLLSLFVEGVATVLSTTKDDIFVFNIQNDTDVSSNILNVT 1276

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA    GT   F+P + LQE++YLNR +L  + + Q  +  +  I  R           
Sbjct: 1277 FSALLPGGTRGRFFPSEDLQEQIYLNRTLLTTI-SAQRVLPFDDNICLR----------- 1324

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
            + C+  +                      K V VL FD                      
Sbjct: 1325 EPCENYM----------------------KCVSVLRFD---------------------- 1340

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKF 207
            +++ F++S +VLFRPI+P++   C  P  F
Sbjct: 1341 SSAPFISSTTVLFRPIHPITGLRCRCPPGF 1370

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Mus musculus (taxid: 10090)

>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens GN=CELSR1 PE=1 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 59/210 (28%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            ML NSITVRL++M++E FLSPLL  F++G+AA++   ++++++F++Q+DTDV+S ILNV+
Sbjct: 1202 MLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQNDTDVSSNILNVT 1261

Query: 61   FSA---RASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA       G F+P + LQE++YLNR +L  ++T Q  +  +  I  R           
Sbjct: 1262 FSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTIST-QRVLPFDDNICLR----------- 1309

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
            + C+  +                      K V VL FD                      
Sbjct: 1310 EPCENYM----------------------KCVSVLRFD---------------------- 1325

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKF 207
            +++ F++S +VLFRPI+P++   C  P  F
Sbjct: 1326 SSAPFLSSTTVLFRPIHPINGLRCRCPPGF 1355

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Homo sapiens (taxid: 9606)

>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus norvegicus GN=Celsr2 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 62/213 (29%)

Query: 1   MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDV-TSRILNV 59
           ML +SIT+RL+DM+ E FLSPLL  F+  +AA +  P +++ +F++Q DTD     ILNV
Sbjct: 349 MLTHSITLRLEDMSPERFLSPLLGLFIQAVAATLATPPDHVVVFNVQRDTDAPGGHILNV 408

Query: 60  SFS-----ARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSAT 114
           S S            F P + LQER+YLNR +L  + + Q  +  +  I  R        
Sbjct: 409 SLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLLTAI-SAQRVLPFDDNICLR-------- 459

Query: 115 LSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVL 174
              + C+  +                      + V VL FD                   
Sbjct: 460 ---EPCENYM----------------------RCVSVLRFD------------------- 475

Query: 175 KFGNASGFVASDSVLFRPIYPVSTFACVHPDKF 207
              +++ F+AS SVLFRPI+PV    C  P  F
Sbjct: 476 ---SSAPFIASSSVLFRPIHPVGGLRCRCPPGF 505

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Rattus norvegicus (taxid: 10116)

>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens GN=CELSR2 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 62/213 (29%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDV-TSRILNV 59
            ML +SIT+RL+DM+ E FLSPLL  F+  +AA +  P +++ +F++Q DTD     ILNV
Sbjct: 1124 MLTHSITLRLEDMSPERFLSPLLGLFIQAVAATLATPPDHVVVFNVQRDTDAPGGHILNV 1183

Query: 60   SFS-----ARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSAT 114
            S S            F P + LQER+YLNR +L  + + Q  +  +  I  R        
Sbjct: 1184 SLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLLTAI-SAQRVLPFDDNICLR-------- 1234

Query: 115  LSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVL 174
               + C+  +                      + V VL FD                   
Sbjct: 1235 ---EPCENYM----------------------RCVSVLRFD------------------- 1250

Query: 175  KFGNASGFVASDSVLFRPIYPVSTFACVHPDKF 207
               +++ F+AS SVLFRPI+PV    C  P  F
Sbjct: 1251 ---SSAPFIASSSVLFRPIHPVGGLRCRCPPGF 1280

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Homo sapiens (taxid: 9606)

>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus GN=Celsr2 PE=1 SV=2

 Score = 77.4 bits (189), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 62/210 (29%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDV-TSRILNV 59
            ML +SIT+RL+DM+ E FLSPLL  F+  +AA +  P +++ +F++Q DTD     ILNV
Sbjct: 1125 MLTHSITLRLEDMSPERFLSPLLGLFIQAVAATLATPPDHVVVFNVQRDTDAPGGHILNV 1184

Query: 60   SFS-----ARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSAT 114
            S S            F P + LQER+YLNR +L  + + +  +  +R  L R        
Sbjct: 1185 SLSVGQPPGPGGGPPFLPSEDLQERLYLNRSLLTAI-SAKRVLPFDRQHLLR-------- 1235

Query: 115  LSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVL 174
               + C+  +                      + V VL FD                   
Sbjct: 1236 ---EPCENYM----------------------RCVSVLRFD------------------- 1251

Query: 175  KFGNASGFVASDSVLFRPIYPVSTFACVHP 204
               +++ F+AS SVLFRPI+ V    C  P
Sbjct: 1252 ---SSAPFIASSSVLFRPIHLVGGLRCRCP 1278

Receptor that may have an important role in cell/cell signaling during nervous system formation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
403182344	3468	AAEL000246-PA [Aedes aegypti]	0.742	0.047	0.573	9e-61
157123386	3478	cadherin [Aedes aegypti]	0.742	0.047	0.573	1e-60
170064482	3396	neural-cadherin [Culex quinquefasciatus]	0.742	0.048	0.560	2e-59
198460509	3592	GA11265 [Drosophila pseudoobscura pseudo	0.742	0.045	0.556	8e-58
195429581	3590	GK19483 [Drosophila willistoni] gi|19415	0.742	0.045	0.556	1e-57
195153499	2716	GL17301 [Drosophila persimilis] gi|19411	0.742	0.060	0.556	1e-57
194757998	3584	GF13772 [Drosophila ananassae] gi|190622	0.742	0.045	0.556	2e-57
195582246	3463	GD10750 [Drosophila simulans] gi|1941929	0.742	0.047	0.551	4e-57
194884197	3582	GG20142 [Drosophila erecta] gi|190659369	0.742	0.045	0.551	4e-57
6049492	3579	starry night protein [Drosophila melanog	0.742	0.045	0.551	4e-57

>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]

 Score =  239 bits (609), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 128/223 (57%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+T+RLD+MT+EAFLSPLLNFF+DGLAAIIPCP+ENIYLFSIQDDTDV+SRILNVS
Sbjct: 1320 MLFNSVTIRLDEMTEEAFLSPLLNFFLDGLAAIIPCPKENIYLFSIQDDTDVSSRILNVS 1379

Query: 61   FSARASDGTF---YPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D  F   Y PQ+LQERVYL                 NR ILARLATVQ      
Sbjct: 1380 FSARRPDVAFEEYYSPQYLQERVYL-----------------NRAILARLATVQ------ 1416

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                             VLPFDDNLCV+EPCLNYEQC++VLKFG
Sbjct: 1417 ---------------------------------VLPFDDNLCVREPCLNYEQCISVLKFG 1443

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NASGF+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1444 NASGFIHSDTVLFRPIYPVNTFACKCPEGFTGSKEHYLCDTEV 1486

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/223 (57%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+T+RLD+MT+EAFLSPLLNFF+DGLAAIIPCP+ENIYLFSIQDDTDV+SRILNVS
Sbjct: 1320 MLFNSVTIRLDEMTEEAFLSPLLNFFLDGLAAIIPCPKENIYLFSIQDDTDVSSRILNVS 1379

Query: 61   FSARASDGTF---YPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D  F   Y PQ+LQERVYL                 NR ILARLATVQ      
Sbjct: 1380 FSARRPDVAFEEYYSPQYLQERVYL-----------------NRAILARLATVQ------ 1416

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                             VLPFDDNLCV+EPCLNYEQC++VLKFG
Sbjct: 1417 ---------------------------------VLPFDDNLCVREPCLNYEQCISVLKFG 1443

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NASGF+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1444 NASGFIHSDTVLFRPIYPVNTFACKCPEGFTGSKEHYLCDTEV 1486

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus] gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/223 (56%), Positives = 146/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNSITVRL++MT+EAF+SPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDV SRILNVS
Sbjct: 1290 MLFNSITVRLNEMTEEAFMSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVNSRILNVS 1349

Query: 61   FSARASD---GTFYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR S+     +Y PQ+LQE+VYLN                 R ILARLATVQ      
Sbjct: 1350 FSARKSNLAAEEYYSPQYLQEKVYLN-----------------RAILARLATVQ------ 1386

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                             VLPFDDNLCV+EPCLNYE+C++VLKFG
Sbjct: 1387 ---------------------------------VLPFDDNLCVREPCLNYEKCLSVLKFG 1413

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NASGF++S++VLFRPI+PV+TFAC  P+ F    +  L  + V
Sbjct: 1414 NASGFISSETVLFRPIHPVNTFACKCPEGFTGSKEHYLCDTEV 1456

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura] gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 124/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+ENI++FSIQDDTDVTSRILNVS
Sbjct: 1322 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKENIFIFSIQDDTDVTSRILNVS 1381

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA+  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1382 FSAKRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1417

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1418 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1445

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1446 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1488

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni] gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+ENI++FSIQDDTDVTSRILNVS
Sbjct: 1311 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKENIFIFSIQDDTDVTSRILNVS 1370

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA+  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1371 FSAKRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1406

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1407 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1434

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1435 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1477

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis] gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+ENI++FSIQDDTDVTSRILNVS
Sbjct: 1322 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKENIFIFSIQDDTDVTSRILNVS 1381

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSA+  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1382 FSAKRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1417

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1418 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1445

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1446 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1488

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae] gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+ENI++FSIQDDTDV+SRILNVS
Sbjct: 1316 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKENIFVFSIQDDTDVSSRILNVS 1375

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1376 FSARRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1411

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1412 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1439

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1440 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1482

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans] gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+E+I++FSIQDDTDV+SRILNVS
Sbjct: 1317 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSRILNVS 1376

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1377 FSARRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1412

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1413 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1440

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1441 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1483

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta] gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+E+I++FSIQDDTDV+SRILNVS
Sbjct: 1317 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSRILNVS 1376

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1377 FSARRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1412

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1413 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1440

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1441 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1483

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/223 (55%), Positives = 145/223 (65%), Gaps = 59/223 (26%)

Query: 1    MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
            MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+E+I++FSIQDDTDV+SRILNVS
Sbjct: 1317 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSRILNVS 1376

Query: 61   FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
            FSAR  D +   FY PQ+LQERVYL                 NR ILARLATV       
Sbjct: 1377 FSARRPDVSHEEFYTPQYLQERVYL-----------------NRAILARLATV------- 1412

Query: 118  DECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFG 177
                                            EVLPFDDNLCV+EPCLN+E+C+TVLKFG
Sbjct: 1413 --------------------------------EVLPFDDNLCVREPCLNFEECLTVLKFG 1440

Query: 178  NASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTSNV 220
            NAS F+ SD+VLFRPIYPV+TFAC  P+ F    +  L  + V
Sbjct: 1441 NASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEV 1483

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
UNIPROTKB|H0Y7R9	772	CELSR1 "Cadherin EGF LAG seven	0.416	0.119	0.494	9.4e-36
FB|FBgn0024836	3579	stan "starry night" [Drosophil	0.746	0.046	0.510	2.2e-35
UNIPROTKB|C9JDM9	1397	CELSR1 "Cadherin EGF LAG seven	0.416	0.065	0.494	5.4e-35
UNIPROTKB|J9P5A2	2668	CELSR1 "Uncharacterized protei	0.416	0.034	0.494	9.8e-35
ZFIN|ZDB-GENE-030616-78	2699	celsr1a "cadherin EGF LAG seve	0.416	0.034	0.484	1e-34
UNIPROTKB|F1PLY1	2725	CELSR1 "Uncharacterized protei	0.416	0.033	0.494	1e-34
MGI|MGI:1100883	3034	Celsr1 "cadherin, EGF LAG seve	0.411	0.029	0.510	1.7e-34
UNIPROTKB|Q9NYQ6	3014	CELSR1 "Cadherin EGF LAG seven	0.416	0.030	0.494	3.4e-34
UNIPROTKB|F1MAS4	3064	F1MAS4 "Uncharacterized protei	0.411	0.029	0.5	4.5e-34
MGI|MGI:1858236	3301	Celsr3 "cadherin, EGF LAG seve	0.398	0.026	0.463	9.7e-31

UNIPROTKB|H0Y7R9 CELSR1 "Cadherin EGF LAG seven-pass G-type receptor 1" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 9.4e-36, Sum P(2) = 9.4e-36
 Identities = 47/95 (49%), Positives = 74/95 (77%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL  F++G+AA++   ++++++F++Q+DTDV+S ILNV+
Sbjct:   577 MLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQNDTDVSSNILNVT 636

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    F+P + LQE++YLNR +L  ++T
Sbjct:   637 FSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTIST 671

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0024836 stan "starry night" [Drosophila melanogaster (taxid:7227)]

 Score = 401 (146.2 bits), Expect = 2.2e-35, P = 2.2e-35
 Identities = 96/188 (51%), Positives = 120/188 (63%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             MLFNS+TVRL++MT+EAFLSPLLNFF+DGLAAIIPCP+E+I++FSIQDDTDV+SRILNVS
Sbjct:  1317 MLFNSVTVRLNEMTEEAFLSPLLNFFLDGLAAIIPCPKEHIFVFSIQDDTDVSSRILNVS 1376

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLATVQERVYLNRGILARLATVQSATLSI 117
             FSAR  D +   FY PQ+LQERVYLNR ILARLATV+   + +         V+   L+ 
Sbjct:  1377 FSARRPDVSHEEFYTPQYLQERVYLNRAILARLATVEVLPFDDN------LCVREPCLNF 1430

Query:   118 DECDTELVVR------HGSTL--------GTFCANTSSYVLDSKEVEVLPFDDNLCVQEP 163
             +EC T L         H  T+         TF  +       SKE  +   + +LC  +P
Sbjct:  1431 EECLTVLKFGNASEFIHSDTVLFRPIYPVNTFACSCPEGFTGSKEHYLCDTEVDLCYSDP 1490

Query:   164 CLNYEQCV 171
             C N   CV
Sbjct:  1491 CQNGGTCV 1498

GO:0005886 "plasma membrane" evidence=IEA;ISS

GO:0007156 "homophilic cell adhesion" evidence=ISS;IDA;TAS

GO:0004930 "G-protein coupled receptor activity" evidence=IEA;ISS

GO:0016339 "calcium-dependent cell-cell adhesion" evidence=ISS;IMP

GO:0016055 "Wnt receptor signaling pathway" evidence=IEP;IMP;NAS

GO:0007409 "axonogenesis" evidence=IMP;NAS

GO:0005911 "cell-cell junction" evidence=IDA

GO:0005057 "receptor signaling protein activity" evidence=ISM;IMP

GO:0016358 "dendrite development" evidence=IEP

GO:0007367 "segment polarity determination" evidence=IEP;IMP

GO:0016021 "integral to membrane" evidence=IEA;ISM;ISS;NAS

GO:0048813 "dendrite morphogenesis" evidence=IMP;TAS

GO:0007165 "signal transduction" evidence=ISS

GO:0004888 "transmembrane signaling receptor activity" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0016318 "ommatidial rotation" evidence=IMP;NAS

GO:0048057 "R3/R4 development" evidence=IMP

GO:0042067 "establishment of ommatidial planar polarity" evidence=IMP;TAS

GO:0007164 "establishment of tissue polarity" evidence=NAS

GO:0016319 "mushroom body development" evidence=IMP

GO:0030177 "positive regulation of Wnt receptor signaling pathway" evidence=NAS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=TAS

GO:0007464 "R3/R4 cell fate commitment" evidence=NAS

GO:0001736 "establishment of planar polarity" evidence=IMP;TAS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0001738 "morphogenesis of a polarized epithelium" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0050770 "regulation of axonogenesis" evidence=IDA

GO:0051963 "regulation of synapse assembly" evidence=IDA

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0070593 "dendrite self-avoidance" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IGI

UNIPROTKB|C9JDM9 CELSR1 "Cadherin EGF LAG seven-pass G-type receptor 1" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
 Identities = 47/95 (49%), Positives = 74/95 (77%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL  F++G+AA++   ++++++F++Q+DTDV+S ILNV+
Sbjct:  1202 MLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQNDTDVSSNILNVT 1261

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    F+P + LQE++YLNR +L  ++T
Sbjct:  1262 FSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTIST 1296

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9P5A2 CELSR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 245 (91.3 bits), Expect = 9.8e-35, Sum P(2) = 9.8e-35
 Identities = 47/95 (49%), Positives = 74/95 (77%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL+ F++G+A ++   ++++++F+IQ+DTDV+S ILNV+
Sbjct:   919 MLTNSITVRLENMSQEKFLSPLLSLFVEGVATVLSTTKDDVFVFNIQNDTDVSSNILNVT 978

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    F+P + LQE++YLNR +L  ++T
Sbjct:   979 FSALLPGGVRDKFFPSEDLQEQIYLNRTLLTAVST 1013

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

ZFIN|ZDB-GENE-030616-78 celsr1a "cadherin EGF LAG seven-pass G-type receptor 1a" [Danio rerio (taxid:7955)]

 Score = 241 (89.9 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 46/95 (48%), Positives = 72/95 (75%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL+ F+ G+AA++   RE +++F++Q+DTDV+  ILNV+
Sbjct:   953 MLTNSITVRLENMSQERFLSPLLSLFVKGVAAVLSTSREGVFIFNVQNDTDVSGNILNVT 1012

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    ++P + LQE++YLNR +L  +++
Sbjct:  1013 FSALLPGGVPDRYFPSEELQEQIYLNRTLLQEISS 1047

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004888 "transmembrane signaling receptor activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007166 "cell surface receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0042074 "cell migration involved in gastrulation" evidence=IGI;IMP

UNIPROTKB|F1PLY1 CELSR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 245 (91.3 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
 Identities = 47/95 (49%), Positives = 74/95 (77%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL+ F++G+A ++   ++++++F+IQ+DTDV+S ILNV+
Sbjct:   997 MLTNSITVRLENMSQEKFLSPLLSLFVEGVATVLSTTKDDVFVFNIQNDTDVSSNILNVT 1056

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    F+P + LQE++YLNR +L  ++T
Sbjct:  1057 FSALLPGGVRDKFFPSEDLQEQIYLNRTLLTAVST 1091

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:1100883 Celsr1 "cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)" [Mus musculus (taxid:10090)]

 Score = 247 (92.0 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 48/94 (51%), Positives = 74/94 (78%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL+ F++G+A ++   +++I++F+IQ+DTDV+S ILNV+
Sbjct:  1217 MLTNSITVRLENMSQEKFLSPLLSLFVEGVATVLSTTKDDIFVFNIQNDTDVSSNILNVT 1276

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLA 91
             FSA    GT   F+P + LQE++YLNR +L  ++
Sbjct:  1277 FSALLPGGTRGRFFPSEDLQEQIYLNRTLLTTIS 1310

GO:0001702 "gastrulation with mouth forming second" evidence=NAS

GO:0001736 "establishment of planar polarity" evidence=IMP

GO:0001764 "neuron migration" evidence=IMP

GO:0001843 "neural tube closure" evidence=IGI;IMP

GO:0001942 "hair follicle development" evidence=IMP

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004888 "transmembrane signaling receptor activity" evidence=NAS

GO:0004930 "G-protein coupled receptor activity" evidence=NAS

GO:0005509 "calcium ion binding" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007165 "signal transduction" evidence=NAS

GO:0007166 "cell surface receptor signaling pathway" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=NAS

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IMP

GO:0007267 "cell-cell signaling" evidence=NAS

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007417 "central nervous system development" evidence=NAS

GO:0007626 "locomotory behavior" evidence=IMP

GO:0009952 "anterior/posterior pattern specification" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IMP

GO:0042060 "wound healing" evidence=IGI

GO:0042249 "establishment of planar polarity of embryonic epithelium" evidence=IMP

GO:0042472 "inner ear morphogenesis" evidence=IMP

GO:0045176 "apical protein localization" evidence=IMP

GO:0046928 "regulation of neurotransmitter secretion" evidence=NAS

GO:0046983 "protein dimerization activity" evidence=NAS

GO:0048105 "establishment of body hair planar orientation" evidence=IMP

GO:0060488 "orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis" evidence=IMP

GO:0060489 "planar dichotomous subdivision of terminal units involved in lung branching morphogenesis" evidence=IMP

GO:0060490 "lateral sprouting involved in lung morphogenesis" evidence=IMP

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IGI

GO:0090251 "protein localization involved in establishment of planar polarity" evidence=IDA

UNIPROTKB|Q9NYQ6 CELSR1 "Cadherin EGF LAG seven-pass G-type receptor 1" [Homo sapiens (taxid:9606)]

 Score = 246 (91.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
 Identities = 47/95 (49%), Positives = 74/95 (77%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL  F++G+AA++   ++++++F++Q+DTDV+S ILNV+
Sbjct:  1202 MLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQNDTDVSSNILNVT 1261

Query:    61 FSARASDGT---FYPPQFLQERVYLNRGILARLAT 92
             FSA    G    F+P + LQE++YLNR +L  ++T
Sbjct:  1262 FSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTIST 1296

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0007626 "locomotory behavior" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0042249 "establishment of planar polarity of embryonic epithelium" evidence=IEA

GO:0042472 "inner ear morphogenesis" evidence=IEA

GO:0045176 "apical protein localization" evidence=IEA

GO:0048105 "establishment of body hair planar orientation" evidence=IEA

GO:0060488 "orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis" evidence=IEA

GO:0060489 "planar dichotomous subdivision of terminal units involved in lung branching morphogenesis" evidence=IEA

GO:0060490 "lateral sprouting involved in lung morphogenesis" evidence=IEA

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

GO:0090251 "protein localization involved in establishment of planar polarity" evidence=IEA

GO:0004888 "transmembrane signaling receptor activity" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007417 "central nervous system development" evidence=NAS;TAS

GO:0004930 "G-protein coupled receptor activity" evidence=NAS

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=NAS

GO:0016021 "integral to membrane" evidence=TAS

GO:0046983 "protein dimerization activity" evidence=NAS

GO:0001736 "establishment of planar polarity" evidence=ISS

GO:0001843 "neural tube closure" evidence=ISS

UNIPROTKB|F1MAS4 F1MAS4 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 243 (90.6 bits), Expect = 4.5e-34, Sum P(2) = 4.5e-34
 Identities = 47/94 (50%), Positives = 74/94 (78%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             ML NSITVRL++M++E FLSPLL+ F++G+A ++   +++I++F+IQ+DTDV+S ILNV+
Sbjct:  1217 MLTNSITVRLENMSQERFLSPLLSLFVEGVATVLSTTKDDIFVFNIQNDTDVSSNILNVT 1276

Query:    61 FSAR---ASDGTFYPPQFLQERVYLNRGILARLA 91
             FSA     + G F+P + LQE++YLNR +L  ++
Sbjct:  1277 FSALLPGGARGRFFPSEDLQEQIYLNRTLLTTIS 1310

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1858236 Celsr3 "cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)" [Mus musculus (taxid:10090)]

 Score = 213 (80.0 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
 Identities = 44/95 (46%), Positives = 68/95 (71%)

Query:     1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVS 60
             +L NS+TVRL++M +E FLSPLL  F++G+AA++  P E++++F+IQ+DTDV   +LNVS
Sbjct:  1261 LLANSLTVRLENMWQERFLSPLLGHFLEGVAAVLATPTEDVFIFNIQNDTDVGGTVLNVS 1320

Query:    61 FSARA-------SDGTFYPPQFLQERVYLNRGILA 88
             FSA A       + G ++  + LQE++Y+ R  LA
Sbjct:  1321 FSALAPRGAGAGAAGPWFSSEELQEQLYVRRAALA 1355

GO:0001764 "neuron migration" evidence=IMP

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004888 "transmembrane signaling receptor activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007166 "cell surface receptor signaling pathway" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007218 "neuropeptide signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007413 "axonal fasciculation" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IGI

GO:0042384 "cilium assembly" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9V5N8	STAN_DROME	No assigned EC number	0.5515	0.7420	0.0458	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
KOG4289|consensus	2531		99.97
KOG1219|consensus	4289		99.89
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	98.71
KOG1219|consensus	4289		98.52
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	98.04
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.94
cd00053	36	EGF Epidermal growth factor domain, found in epide	97.75
smart00181	35	EGF Epidermal growth factor-like domain.	97.56
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	97.25
KOG4289|consensus	2531		97.1
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.03
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	96.89
PHA02887	126	EGF-like protein; Provisional	95.99
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	95.75
KOG3516|consensus	1306		94.29
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	93.3
KOG3514|consensus	1591		93.28
PF12662	24	cEGF: Complement Clr-like EGF-like	92.92
KOG3516|consensus	1306		92.91
KOG1217|consensus	487		90.73
PF11548	91	Receptor_IA-2: Protein-tyrosine phosphatase recept	89.56
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	89.26
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	88.62
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	87.89
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	83.02
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	80.39
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	80.01

>KOG4289|consensus

Probab=99.97  E-value=2.1e-31  Score=268.90  Aligned_cols=157  Identities=49%  Similarity=0.875  Sum_probs=142.3

Q ss_pred             CCcceEEEEecCCChhhhhHHHHHHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEc-CCCCcCChHHHHHH
Q psy2064           1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARA-SDGTFYPPQFLQER   79 (221)
Q Consensus         1 ml~nSvtiR~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~-s~~~y~~p~~l~~~   79 (221)
                      ||.||+|+||++|++|+||++.+.+|++++|.++++++++|+||.||+++++.+ .|+|.|++++ ..++|++.|.|+++
T Consensus      1084 ~Lt~S~TlrLe~Ms~e~FlsPLl~rF~eavaa~l~t~p~dv~vfnvq~dtD~~~-ilNvs~s~~~rgvrgw~~sE~lqE~ 1162 (2531)
T KOG4289|consen 1084 MLTNSITLRLENMSQERFLSPLLGRFREAVAAVLATPPDDVFVFNVQNDTDVVG-ILNVSFSALGRGVRGWFPSEDLQEQ 1162 (2531)
T ss_pred             HhccceEeEhhhcCHhHhhhHHHHHHHHHHHHHhcCCcccEEEEeccccCCcce-EEEEEEeccCCcccccccHHHHHHH
Confidence            799999999999999999999999999999999999999999999999887655 9999999986 23479999999999


Q ss_pred             HHHhHHHHHhhhhhhHHHhhhhhhhhhhhcceeeeeeccccccceeeecCCccceeeecccceeecCcceeecCCCCCCC
Q psy2064          80 VYLNRGILARLATVQERVYLNRGILARLATVQSATLSIDECDTELVVRHGSTLGTFCANTSSYVLDSKEVEVLPFDDNLC  159 (221)
Q Consensus        80 l~~~r~~L~~~~~~~~~~~~~~~~~e~~lg~~i~~v~~deC~~~~~~~~~s~~~~~~~~~~s~v~~~~~~~v~p~~~~~C  159 (221)
                      ||.    |+.++.+                                                        .|+||.+|.|
T Consensus      1163 iy~----L~~~sll--------------------------------------------------------~VlpfdDniC 1182 (2531)
T KOG4289|consen 1163 IYL----LTAISLL--------------------------------------------------------RVLPFDDNIC 1182 (2531)
T ss_pred             HHH----HHHhhhe--------------------------------------------------------eeeeccCchh
Confidence            987    4332222                                                        6788999999


Q ss_pred             CCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc--cc-ccc
Q psy2064         160 VQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS--IL-TTS  218 (221)
Q Consensus       160 ~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~--~~-~~~  218 (221)
                      .++||.|++.|++++||..+.+|++|+++|||||+|+++++|+||+||||.+|+  |+ |-+
T Consensus      1183 lrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~CeTeiDlCYs 1244 (2531)
T KOG4289|consen 1183 LREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCETEIDLCYS 1244 (2531)
T ss_pred             hcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCcccccchhHhhhc
Confidence            999999999999999999999999999999999999999999999999999998  54 543

>KOG1219|consensus

Probab=99.89  E-value=8.7e-23  Score=212.56  Aligned_cols=176  Identities=21%  Similarity=0.355  Sum_probs=144.4

Q ss_pred             CCcceEEEEecCCChhhhhHHHHHHHHHHHHhhCCCCCCc-EEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHH
Q psy2064           1 MLFNSITVRLDDMTKEAFLSPLLNFFMDGLAAIIPCPREN-IYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQER   79 (221)
Q Consensus         1 ml~nSvtiR~~~~t~EeFl~~~~~~f~~~La~~l~~~~~~-V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~   79 (221)
                      ||+|+|+|||+++|+|||+++||+.|+|+|+..|+.++.+ |+++|+|++.  +..++||+++++++.++||+++.|..+
T Consensus      3493 ~l~haV~IrfrnlTpeefv~~h~r~fRRils~~ld~rr~dsiqliSlQ~v~--gt~~VdvLl~ve~~g~tf~ktd~l~sk 3570 (4289)
T KOG1219|consen 3493 MLQHAVEIRFRNLTPEEFVGDHWRNFRRILSHELDFRRVDSIQLISLQPVE--GTQDVDVLLLVEGHGSTFYKTDALASK 3570 (4289)
T ss_pred             HhcCeEEEEEecCCHHHHhhhhhhhHHHHHHHhhccccccceeeEEeeecC--CCCceeEEEEEccCCcceecHHHHHHH
Confidence            7999999999999999999999999999999999999988 9999999542  245799999999998899999999999


Q ss_pred             HHHhHHHHHhhhhhhHHHhhhhhhhhhhhcceeeeee--ccccccceeeecCCccceeeecccceeecCcce--------
Q psy2064          80 VYLNRGILARLATVQERVYLNRGILARLATVQSATLS--IDECDTELVVRHGSTLGTFCANTSSYVLDSKEV--------  149 (221)
Q Consensus        80 l~~~r~~L~~~~~~~~~~~~~~~~~e~~lg~~i~~v~--~deC~~~~~~~~~s~~~~~~~~~~s~v~~~~~~--------  149 (221)
                      |...++++++..+ +||         .++.+.+++..  ...|...+.+ ..+...++++++.|||.+.+..        
T Consensus      3571 I~ns~~~men~~~-rmr---------~~fqm~C~g~dC~~q~C~e~V~l-de~v~stvSTarlSfvtPrh~r~a~ClC~~ 3639 (4289)
T KOG1219|consen 3571 IENSIEKMENIGG-RMR---------LLFQMSCTGLDCQGQRCSEQVSL-DEEVKSTVSTARLSFVTPRHHRTAACLCNR 3639 (4289)
T ss_pred             hhhHHHHHHHHHH-HHH---------HHHHhhccCCcCCcceeeeeeee-ccccccccchhheeeecchhhccceeeecC
Confidence            9999999987765 344         33444444443  3466665533 3445678999999999887532        


Q ss_pred             eecCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC
Q psy2064         150 EVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD  209 (221)
Q Consensus       150 ~v~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G  209 (221)
                      +.||...+.|.+.||+.++.|++..-                    ..+|.|+||.|.-|
T Consensus      3640 G~Cp~~~~~C~~~pcp~~~~Cvs~~~--------------------~~~~~cVcP~gr~g 3679 (4289)
T KOG1219|consen 3640 GFCPVETNQCAKSPCPAGNLCVSSVH--------------------NSTYTCVCPIGRFG 3679 (4289)
T ss_pred             CcCCcccCccccCCCcccCccccccc--------------------ccceeEeccCcccc
Confidence            56899999999999999999999632                    34799999999544

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.71  E-value=5.8e-09  Score=64.60  Aligned_cols=32  Identities=22%  Similarity=0.605  Sum_probs=28.1

Q ss_pred             CCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         159 CVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       159 C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      |..+||.|+|+|++..                     ..+|.|+||+||+|++
T Consensus         1 C~~~~C~n~g~C~~~~---------------------~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLP---------------------GGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTTSSTTTEEEEEES---------------------TSEEEEEEBTTEESTT
T ss_pred             CCCCcCCCCeEEEeCC---------------------CCCEEeECCCCCccCC
Confidence            7788999999999862                     3689999999999985

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG1219|consensus

Probab=98.52  E-value=1e-07  Score=102.42  Aligned_cols=62  Identities=24%  Similarity=0.421  Sum_probs=48.5

Q ss_pred             cceeeecccceeecCcceeecCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         132 LGTFCANTSSYVLDSKEVEVLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       132 ~~~~~~~~~s~v~~~~~~~v~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      .|-.|...+-|..     +.|....++|..+||++||+|++.                      -++|.|.||.||||.+
T Consensus      3884 ggy~CkCpsqysG-----~~CEi~~epC~snPC~~GgtCip~----------------------~n~f~CnC~~gyTG~~ 3936 (4289)
T KOG1219|consen 3884 GGYKCKCPSQYSG-----NHCEIDLEPCASNPCLTGGTCIPF----------------------YNGFLCNCPNGYTGKR 3936 (4289)
T ss_pred             CceEEeCcccccC-----cccccccccccCCCCCCCCEEEec----------------------CCCeeEeCCCCccCce
Confidence            3466776666652     345568899999999999999986                      4699999999999999


Q ss_pred             cccc----ccccC
Q psy2064         212 DSIL----TTSNV  220 (221)
Q Consensus       212 ~~~~----~~~~~  220 (221)
                      |+-.    |.-|+
T Consensus      3937 Ce~~Gi~eCs~n~ 3949 (4289)
T KOG1219|consen 3937 CEARGISECSKNV 3949 (4289)
T ss_pred             eeccccccccccc
Confidence            9854    65553

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=98.04  E-value=6.4e-06  Score=51.24  Aligned_cols=36  Identities=25%  Similarity=0.560  Sum_probs=29.9

Q ss_pred             CCCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC-CCCcc
Q psy2064         156 DNLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY-DGLDS  213 (221)
Q Consensus       156 ~~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~-G~~~~  213 (221)
                      .+.|.. .||.+++.|+..                      ..+|.|.||+||. |.+|.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~----------------------~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179        2 IDECASGNPCQNGGTCVNT----------------------VGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             cccCcCCCCcCCCCEeECC----------------------CCCeEeECCCCCccCCcCC
Confidence            357877 899999999875                      4589999999999 88773

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.94  E-value=1.2e-05  Score=49.11  Aligned_cols=35  Identities=26%  Similarity=0.620  Sum_probs=29.5

Q ss_pred             CCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         157 NLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       157 ~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      +.|.. .||.+++.|...                      ..+|.|.|++||.|.+|.
T Consensus         3 ~~C~~~~~C~~~~~C~~~----------------------~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054           3 DECASGNPCQNGGTCVNT----------------------VGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             ccCCCCCCcCCCCEeECC----------------------CCCeEeECCCCCcCCcCC
Confidence            57877 799999999875                      357999999999998763

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=97.75  E-value=3.9e-05  Score=46.08  Aligned_cols=32  Identities=28%  Similarity=0.690  Sum_probs=27.0

Q ss_pred             CC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC-Cc
Q psy2064         159 CV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG-LD  212 (221)
Q Consensus       159 C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~-~~  212 (221)
                      |. ..||.+++.|+..                      ..+|.|.||.||.|. .|
T Consensus         2 C~~~~~C~~~~~C~~~----------------------~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           2 CAASNPCSNGGTCVNT----------------------PGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCCCCEEecC----------------------CCCeEeECCCCCcccCCc
Confidence            55 7899999999875                      357999999999998 54

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.56  E-value=9.8e-05  Score=45.19  Aligned_cols=32  Identities=22%  Similarity=0.601  Sum_probs=26.4

Q ss_pred             CCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC-CCc
Q psy2064         158 LCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD-GLD  212 (221)
Q Consensus       158 ~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G-~~~  212 (221)
                      .|.. .||.++ .|+..                      ..+|.|.|++||.| +.|
T Consensus         1 ~C~~~~~C~~~-~C~~~----------------------~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        1 ECASGGPCSNG-TCINT----------------------PGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCcCCCCCC-EEECC----------------------CCCeEeECCCCCccCCcc
Confidence            3666 799999 99875                      35899999999999 665

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=97.25  E-value=8.5e-05  Score=37.38  Aligned_cols=13  Identities=15%  Similarity=0.235  Sum_probs=10.9

Q ss_pred             eeeCCCCCCCCCc
Q psy2064         200 ACVHPDKFYDGLD  212 (221)
Q Consensus       200 ~C~CP~Gf~G~~~  212 (221)
                      .|+||+||+|++|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            5999999999987

>KOG4289|consensus

Probab=97.10  E-value=0.00026  Score=74.86  Aligned_cols=41  Identities=20%  Similarity=0.402  Sum_probs=36.7

Q ss_pred             CCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         154 FDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       154 ~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      ...+.|-+.||-|+|+|...                      .++|.|+|-+||+|.+|++..
T Consensus      1237 TeiDlCYs~pC~nng~C~sr----------------------EggYtCeCrpg~tGehCEvs~ 1277 (2531)
T KOG4289|consen 1237 TEIDLCYSGPCGNNGRCRSR----------------------EGGYTCECRPGFTGEHCEVSA 1277 (2531)
T ss_pred             chhHhhhcCCCCCCCceEEe----------------------cCceeEEecCCccccceeeec
Confidence            45678899999999999986                      689999999999999999864

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.03  E-value=0.0008  Score=41.74  Aligned_cols=27  Identities=19%  Similarity=0.251  Sum_probs=22.9

Q ss_pred             CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064         162 EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       162 ~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                      +.|.+.|+|+..                        ...|+|++||+|+.|
T Consensus         6 ~~C~~~G~C~~~------------------------~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVSP------------------------CGRCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeCC------------------------CCEEECCCCCcCCCC
Confidence            579999999853                        358999999999986

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=96.89  E-value=0.00067  Score=43.99  Aligned_cols=30  Identities=20%  Similarity=0.636  Sum_probs=24.9

Q ss_pred             CCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC
Q psy2064         157 NLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY  208 (221)
Q Consensus       157 ~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~  208 (221)
                      +.|.  .++|.+++.|+.+                      ..+|.|.||+||.
T Consensus         3 dEC~~~~~~C~~~~~C~N~----------------------~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    3 DECAEGPHNCPENGTCVNT----------------------EGSYSCSCPPGYE   34 (42)
T ss_dssp             STTTTTSSSSSTTSEEEEE----------------------TTEEEEEESTTEE
T ss_pred             cccCCCCCcCCCCCEEEcC----------------------CCCEEeeCCCCcE
Confidence            5564  3569999999986                      5799999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PHA02887 EGF-like protein; Provisional

Probab=95.99  E-value=0.006  Score=48.64  Aligned_cols=39  Identities=13%  Similarity=0.341  Sum_probs=29.5

Q ss_pred             CCCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         156 DNLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..+|.   .+-|.|| +|.=-.                    ....+.|.|+.||+|+||+..
T Consensus        83 f~pC~~eyk~YCiHG-~C~yI~--------------------dL~epsCrC~~GYtG~RCE~v  124 (126)
T PHA02887         83 FEKCKNDFNDFCING-ECMNII--------------------DLDEKFCICNKGYTGIRCDEV  124 (126)
T ss_pred             ccccChHhhCEeeCC-EEEccc--------------------cCCCceeECCCCcccCCCCcc
Confidence            46785   5679975 997532                    245789999999999999854

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=95.75  E-value=0.0066  Score=49.16  Aligned_cols=38  Identities=16%  Similarity=0.282  Sum_probs=29.4

Q ss_pred             CCCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         156 DNLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       156 ~~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ...|.   ++-|.|| +|.=-.                    ....+.|.|+.||+|.||+.
T Consensus        42 i~~Cp~ey~~YClHG-~C~yI~--------------------dl~~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         42 IRLCGPEGDGYCLHG-DCIHAR--------------------DIDGMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             cccCChhhCCEeECC-EEEeec--------------------cCCCceeECCCCcccccccc
Confidence            46674   5679998 897532                    24578999999999999974

>KOG3516|consensus

Probab=94.29  E-value=0.038  Score=58.18  Aligned_cols=42  Identities=26%  Similarity=0.452  Sum_probs=34.2

Q ss_pred             ecCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCccc
Q psy2064         151 VLPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSI  214 (221)
Q Consensus       151 v~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~  214 (221)
                      +-|.-..-|++.||+|||+|++.                      -.+|.|-|- ..|+||.|.-
T Consensus       950 v~~GC~GhCss~~C~NGG~Cver----------------------y~gytCDCs~Tay~Gp~Cs~  992 (1306)
T KOG3516|consen  950 VSPGCEGHCSSYPCLNGGHCVER----------------------YDGYTCDCSRTAYDGPFCSK  992 (1306)
T ss_pred             ccCCCccccccccccCCCEEEEe----------------------cCceeeccccCcCCCCcccc
Confidence            34445568999999999999986                      359999997 4699999973

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=93.30  E-value=0.032  Score=35.39  Aligned_cols=27  Identities=11%  Similarity=0.391  Sum_probs=20.0

Q ss_pred             CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064         162 EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG  210 (221)
Q Consensus       162 ~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~  210 (221)
                      ..|....+|..+                      ...|.|+|++||.|.
T Consensus         6 ~~C~~nA~C~~~----------------------~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    6 GGCHPNATCTNT----------------------GGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GGS-TTCEEEE-----------------------TTSEEEEE-CEEECC
T ss_pred             CCCCCCcEeecC----------------------CCCEEeECCCCCccC
Confidence            468888999876                      347999999999996

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG3514|consensus

Probab=93.28  E-value=0.048  Score=57.09  Aligned_cols=35  Identities=23%  Similarity=0.441  Sum_probs=30.7

Q ss_pred             CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCccc
Q psy2064         158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSI  214 (221)
Q Consensus       158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~  214 (221)
                      .|..+||.|||.|.+.                      -+.|.|.|- .||.|+.|+-
T Consensus       625 ~C~~nPC~N~g~C~eg----------------------wNrfiCDCs~T~~~G~~Cer  660 (1591)
T KOG3514|consen  625 ICESNPCQNGGKCSEG----------------------WNRFICDCSGTGFEGRTCER  660 (1591)
T ss_pred             ccCCCcccCCCCcccc----------------------ccccccccccCcccCccccc
Confidence            8999999999999987                      357999997 5899999983

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=92.92  E-value=0.057  Score=31.46  Aligned_cols=11  Identities=18%  Similarity=0.776  Sum_probs=9.9

Q ss_pred             cceeeCCCCCC
Q psy2064         198 TFACVHPDKFY  208 (221)
Q Consensus       198 ~y~C~CP~Gf~  208 (221)
                      +|.|+||+||.
T Consensus         1 sy~C~C~~Gy~   11 (24)
T PF12662_consen    1 SYTCSCPPGYQ   11 (24)
T ss_pred             CEEeeCCCCCc
Confidence            48999999997

>KOG3516|consensus

Probab=92.91  E-value=0.066  Score=56.45  Aligned_cols=36  Identities=17%  Similarity=0.467  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcc
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDS  213 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~  213 (221)
                      .+.|.++||++||.|+...                      ..|.|-|- .||.|.-||
T Consensus       545 ~drClPN~CehgG~C~Qs~----------------------~~f~C~C~~TGY~GatCH  581 (1306)
T KOG3516|consen  545 SDRCLPNPCEHGGKCSQSW----------------------DDFECNCELTGYKGATCH  581 (1306)
T ss_pred             ccccCCccccCCCcccccc----------------------cceeEecccccccccccc
Confidence            5799999999999999852                      47999999 999999999

>KOG1217|consensus

Probab=90.73  E-value=0.23  Score=45.18  Aligned_cols=36  Identities=31%  Similarity=0.576  Sum_probs=29.9

Q ss_pred             CCCCCCCCC-CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064         155 DDNLCVQEP-CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       155 ~~~~C~~~P-C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                      ..+.|...+ |.|+++|+..                      ...|.|.||+||+|..+
T Consensus       270 ~~~~C~~~~~c~~~~~C~~~----------------------~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  270 DVDSCALIASCPNGGTCVNV----------------------PGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             eccccCCCCccCCCCeeecC----------------------CCcceeeCCCCCCCCCC
Confidence            457888764 9999999975                      22499999999999998

>PF11548 Receptor_IA-2: Protein-tyrosine phosphatase receptor IA-2; InterPro: IPR021613 IA-2 is a protein-tyrosine phosphatase receptor that upon exocytosis, the cytoplasmic domain is cleaved and moves to the nucleus where it enhances transcription of the insulin gene

Probab=89.56  E-value=2  Score=32.90  Aligned_cols=78  Identities=15%  Similarity=0.157  Sum_probs=52.3

Q ss_pred             hhhhhHHH-HHHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHHHHHhHHHHHhhhhh
Q psy2064          15 KEAFLSPL-LNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATV   93 (221)
Q Consensus        15 ~EeFl~~~-~~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~l~~~r~~L~~~~~~   93 (221)
                      ..++++.. =.++++.|+++++++.....=+||...        .|.|=|+..+- =+....+.++...++.+|      
T Consensus        10 ~nd~ls~~~G~~l~~~la~~l~l~s~~F~~i~V~g~--------avTFrv~~N~~-n~taadVa~~a~~~K~~L------   74 (91)
T PF11548_consen   10 GNDPLSWDEGSRLMEKLAELLHLPSSSFINISVVGP--------AVTFRVRPNNK-NLTAADVAKQAVDNKNQL------   74 (91)
T ss_dssp             S-TT--HHHHHHHHHHHHHHHTS-GGGEEEEEEETT--------EEEEEE---TT----HHHHHHHHHHTHHHH------
T ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCcccceeeeecCc--------eEEEEeccCcC-CCCHHHHHHHHHHhHHHH------
Confidence            34666652 356899999999999888888888832        37788876653 677888888888889999      


Q ss_pred             hHHHhhhhhhhhhhhcceeeeeecc
Q psy2064          94 QERVYLNRGILARLATVQSATLSID  118 (221)
Q Consensus        94 ~~~~~~~~~~~e~~lg~~i~~v~~d  118 (221)
                                 |+.+|+.|.+-++.
T Consensus        75 -----------e~~tG~~Iv~tGvG   88 (91)
T PF11548_consen   75 -----------EKETGLKIVQTGVG   88 (91)
T ss_dssp             -----------HHHHSS-EEEEEEE
T ss_pred             -----------HHhhCcEEeecccc
Confidence                       89999999876653

The mature exodomain of IA-2 participates in adhesion to the extracellular matrix and is self-proteolyzed in vitro by reactive oxygen species which may be a new shedding mechanism. ; PDB: 2QT7_B 3N01_B 3N4W_B 3NG8_A.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=89.26  E-value=0.37  Score=41.17  Aligned_cols=32  Identities=16%  Similarity=0.250  Sum_probs=19.8

Q ss_pred             ChhhhhHHHHHHHHHHHHhhCCCCCCcEEEEEee
Q psy2064          14 TKEAFLSPLLNFFMDGLAAIIPCPRENIYLFSIQ   47 (221)
Q Consensus        14 t~EeFl~~~~~~f~~~La~~l~~~~~~V~IfSvq   47 (221)
                      .+++|  ...+.|...|.+.|...++.++|-=|+
T Consensus        16 ~~~~~--~~~k~f~~~l~~~l~~~~~~~rvglv~   47 (224)
T cd01475          16 RPENF--ELVKQFLNQIIDSLDVGPDATRVGLVQ   47 (224)
T ss_pred             CHHHH--HHHHHHHHHHHHhcccCCCccEEEEEE
Confidence            45555  235566666666677777666666666

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=88.62  E-value=0.32  Score=30.69  Aligned_cols=12  Identities=25%  Similarity=0.578  Sum_probs=10.0

Q ss_pred             CcceeeCCCCCC
Q psy2064         197 STFACVHPDKFY  208 (221)
Q Consensus       197 ~~y~C~CP~Gf~  208 (221)
                      ....|.||+||-
T Consensus        16 ~~~~C~CPeGyI   27 (34)
T PF09064_consen   16 SPGQCFCPEGYI   27 (34)
T ss_pred             CCCceeCCCceE
Confidence            467999999993

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=87.89  E-value=0.54  Score=36.05  Aligned_cols=31  Identities=16%  Similarity=0.227  Sum_probs=24.2

Q ss_pred             CCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC
Q psy2064         155 DDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY  208 (221)
Q Consensus       155 ~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~  208 (221)
                      +.+.|. ...|-.+|.|...                       ....|.|++||.
T Consensus        76 p~d~Cd~y~~CG~~g~C~~~-----------------------~~~~C~Cl~GF~  107 (110)
T PF00954_consen   76 PKDQCDVYGFCGPNGICNSN-----------------------NSPKCSCLPGFE  107 (110)
T ss_pred             cccCCCCccccCCccEeCCC-----------------------CCCceECCCCcC
Confidence            557885 6899999999653                       234599999996

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=83.02  E-value=0.65  Score=29.42  Aligned_cols=12  Identities=17%  Similarity=0.678  Sum_probs=9.6

Q ss_pred             CcceeeCCCCCC
Q psy2064         197 STFACVHPDKFY  208 (221)
Q Consensus       197 ~~y~C~CP~Gf~  208 (221)
                      .+|+|.||+||.
T Consensus        17 g~~~C~C~~Gy~   28 (36)
T PF14670_consen   17 GSYRCSCPPGYK   28 (36)
T ss_dssp             TSEEEE-STTEE
T ss_pred             CceEeECCCCCE
Confidence            479999999995

...

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=80.39  E-value=3.6  Score=27.26  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=20.3

Q ss_pred             CCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC
Q psy2064         156 DNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY  208 (221)
Q Consensus       156 ~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~  208 (221)
                      .+.|. .+.|..+..|+..                          .|+||+||.
T Consensus        19 g~~C~~~~qC~~~s~C~~g--------------------------~C~C~~g~~   46 (52)
T PF01683_consen   19 GESCESDEQCIGGSVCVNG--------------------------RCQCPPGYV   46 (52)
T ss_pred             CCCCCCcCCCCCcCEEcCC--------------------------EeECCCCCE
Confidence            35574 6778888888542                          699999984

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=80.01  E-value=1  Score=29.69  Aligned_cols=16  Identities=19%  Similarity=-0.043  Sum_probs=13.8

Q ss_pred             cceeeCCCCCCCCCcc
Q psy2064         198 TFACVHPDKFYDGLDS  213 (221)
Q Consensus       198 ~y~C~CP~Gf~G~~~~  213 (221)
                      +.+|.|+++++|++|.
T Consensus        17 ~G~C~C~~~~~G~~C~   32 (49)
T PF00053_consen   17 TGQCVCKPGTTGPRCD   32 (49)
T ss_dssp             CEEESBSTTEESTTS-
T ss_pred             CCEEeccccccCCcCc
Confidence            5689999999999998

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.93
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.92
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.73
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.68
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.67
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.62
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	98.51
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.43
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.43
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.32
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	98.31
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.99
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.96
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.95
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	97.91
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	97.89
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	97.85
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.81
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.77
2vh0_B	134	Activated factor XA light chain; serine protease,	97.74
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.73
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	97.72
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	97.65
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	97.62
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.62
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	97.59
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.59
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	97.55
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	97.5
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	97.49
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	97.43
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	97.41
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	97.24
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.14
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.07
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	96.96
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	96.93
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	96.93
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	96.9
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	96.88
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	96.86
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	96.81
2bou_A	143	EGF-like module containing mucin-like hormone rece	96.65
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.48
2bou_A	143	EGF-like module containing mucin-like hormone rece	96.27
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	96.17
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	96.13
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	96.11
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	96.11
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	96.11
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.99
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	95.65
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	95.61
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	95.59
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	95.58
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	95.5
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	95.06
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	94.95
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	94.94
1aut_L	114	Activated protein C; serine proteinase, plasma cal	94.84
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	94.83
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	94.65
3v65_B	386	Low-density lipoprotein receptor-related protein;	94.63
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	94.35
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	94.12
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	93.9
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	93.9
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	93.87
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	93.79
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.39
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	93.19
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	92.8
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	92.8
2vh0_B	134	Activated factor XA light chain; serine protease,	92.45
4hti_A	99	Receptor-type tyrosine-protein phosphatase N2; pho	92.38
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	92.01
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	91.72
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	91.26
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	91.25
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	90.98
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	90.69
2qt7_A	91	Receptor-type tyrosine-protein phosphatase-like N;	90.23
1szb_A	170	Mannose binding lectin-associated serine protease-	89.25
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	89.0
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	87.7
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	84.97
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	84.83
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	82.24
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	81.92
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	81.83
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	81.03

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.93  E-value=8.6e-10  Score=69.35  Aligned_cols=38  Identities=26%  Similarity=0.576  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.+.|..+||.|+|+|+..                      ..+|.|.||+||+|++|++
T Consensus         2 d~d~C~~~pC~ngg~C~~~----------------------~~~~~C~C~~G~~G~~Ce~   39 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDD----------------------INSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEE----------------------TTEEEEECCTTCCSTTSCC
T ss_pred             ccccCCCCCCCCCCEeEcC----------------------CCceEeECCCCCcCCccCC
Confidence            3478999999999999875                      3589999999999999864

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.92  E-value=3.4e-10  Score=77.54  Aligned_cols=42  Identities=19%  Similarity=0.300  Sum_probs=33.2

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      ..+.|.++||+|||+|.....                 +....+|.|.||+||+|++|+
T Consensus         7 ~~~eC~s~pC~NgGtC~~~~~-----------------~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            7 KCAEKEKTFCVNGGECFMVKD-----------------LSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             ECCSTTTTTSCTTCEEEEECC-----------------C--CCCEEEEECTTEESTTSC
T ss_pred             cCCCCcCCCCCCCCCcCCCCc-----------------cCCCCCEeEeCCCCCcCCCcC
Confidence            458999999999999965311                 012468999999999999998

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.73  E-value=6.9e-09  Score=67.49  Aligned_cols=39  Identities=10%  Similarity=0.096  Sum_probs=31.2

Q ss_pred             CCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      +.|..+   ||.|||+|+...                    ...+|.|.||+||+|++|.+.
T Consensus         1 ~~C~~~~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~   42 (45)
T 1a3p_A            1 PGXPSSYDGYCLNGGVXMHIE--------------------SLDSYTCNCVIGYSGDRCQTR   42 (45)
T ss_dssp             CCCTTCCSSCCSSSCEEEECT--------------------TTSSEEEECCTTEETTTTCEE
T ss_pred             CCcccCCCCCCCCCCEEEeec--------------------CCCCEEEEcCCCCcCCcCCcc
Confidence            367777   999999998410                    145899999999999999854

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.68  E-value=1.6e-08  Score=67.99  Aligned_cols=39  Identities=15%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             CCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      +.|..+   ||.|||+|+...                    ...+|.|.||+||+|.+|.+.
T Consensus         4 ~~C~~~~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~   45 (53)
T 1egf_A            4 PGCPSSYDGYCLNGGVCMHIE--------------------SLDSYTCNCVIGYSGDRCQTR   45 (53)
T ss_dssp             CCCCTTSSCSSCSSCEEEEES--------------------SSSCEEEECCTTCCSSSSCCC
T ss_pred             ccCCCCCCCcCCCCcEEEeeC--------------------CCCCEEEECCCCCcCCcCCcc
Confidence            578776   999999998420                    145899999999999999853

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.67  E-value=4.5e-09  Score=72.91  Aligned_cols=43  Identities=16%  Similarity=0.182  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      +.|..+||.|||+|+....                 .....+|.|.||+||+|++|....
T Consensus         7 ~~C~~~pC~ngG~C~~~~~-----------------~~~~~~y~C~C~~Gf~G~~Ce~~i   49 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKD-----------------LSNPSRYLCKCQPGFTGARCTENV   49 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEES-----------------SSSSCCEEEECCTTEESTTSCEEC
T ss_pred             CCCCCCcCCCCcEEecCCc-----------------cCCCCCEEEECCCCCcCCccCcCc
Confidence            6788999999999986210                 012458999999999999998543

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.62  E-value=1.4e-08  Score=66.84  Aligned_cols=39  Identities=18%  Similarity=0.278  Sum_probs=31.2

Q ss_pred             CCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         156 DNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .++|..   +||.| |+|+...                    ..++|.|.||+||+|++|++.
T Consensus         3 i~~C~~~~~~pC~n-G~C~~~~--------------------~~~~~~C~C~~GytG~~Ce~~   44 (46)
T 1k36_A            3 ITKCSSDMNGYCLH-GQCIYLV--------------------DMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             EECCCTTCCSSCSS-EEEEEET--------------------TTTEEEEEECTTCSSTTSCCC
T ss_pred             cccCCCCCCCCCCC-CEeeccC--------------------CCCCEEEECCCCCccCCCCcc
Confidence            357877   99999 7998631                    135799999999999999864

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=98.51  E-value=2.4e-08  Score=67.58  Aligned_cols=35  Identities=14%  Similarity=0.269  Sum_probs=28.7

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+||.|||+|+...                    ...+|.|.||+||+|++|.+.
T Consensus        11 ~~pC~nGG~C~~~~--------------------~~~~~~C~C~~GytG~~Ce~~   45 (53)
T 1nql_B           11 DGYCLHDGVCMYIE--------------------ALDKYACNCVVGYIGERCQYR   45 (53)
T ss_dssp             CCEECTTCEEEEET--------------------TTTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCeEEeeec--------------------CCCCEEEecCCCCcCCCCCcC
Confidence            68999999998310                    145799999999999999865

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.43  E-value=2.5e-08  Score=69.58  Aligned_cols=38  Identities=16%  Similarity=0.284  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCC--cEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC-CCCccc
Q psy2064         155 DDNLCVQEPCLNY--EQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY-DGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ng--g~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~-G~~~~~  214 (221)
                      ..+.|..+||.||  |+|++.                      ..+|.|.||+||+ |..|..
T Consensus        10 ~~d~C~snPC~nga~gtC~~~----------------------~g~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKET----------------------NSGYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEEC----------------------SSEEEEECCTTEEEEECSSS
T ss_pred             CCCcCcCCCCcCCCccccccC----------------------CCceEeECCCCCccCCCCCC
Confidence            3578999999999  999986                      4589999999999 999863

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.43  E-value=1.3e-07  Score=69.99  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=36.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTS  218 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~~  218 (221)
                      ..+.|..+||.|||+|+...                    ...+|.|.||+||+|++|.++.++
T Consensus        47 ~~~~C~~~pC~ngg~C~~~~--------------------~~~~~~C~C~~G~~G~~Ce~~ide   90 (91)
T 1tpg_A           47 PVKSCSEPRCFNGGTCQQAL--------------------YFSDFVCQCPEGFAGKSCEIDTRA   90 (91)
T ss_dssp             CEEECSSCCSCTTCEEEEES--------------------SSSCEEEECCTTCBSSSCCBCSSC
T ss_pred             cCCcccCCCCCCCCEeecCC--------------------CCCCeEeECCCCCcCCcCCcCCCC
Confidence            34789999999999999752                    125899999999999999876543

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.32  E-value=1e-07  Score=63.81  Aligned_cols=37  Identities=19%  Similarity=0.259  Sum_probs=28.3

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+||+|||+|+....                  ....+|.|.||+||+|++|+..
T Consensus        13 ~~pC~NGGtC~~~~~------------------~~~~~y~C~C~~Gf~G~~Ce~~   49 (52)
T 3ca7_A           13 AWYCLNDAHCFAVKI------------------ADLPVYSCECAIGFMGQRCEYK   49 (52)
T ss_dssp             HHTSCTTCEEEEEEE------------------TTEEEEEEECCTTEESTTSCEE
T ss_pred             CCcCCCCCEEecCcc------------------CCCCCEEEECCCCCcCCCCccc
Confidence            569999999986310                  0124799999999999999854

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=98.31  E-value=1e-07  Score=65.63  Aligned_cols=41  Identities=20%  Similarity=0.334  Sum_probs=30.0

Q ss_pred             CCCCCC----CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQE----PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~----PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      -.|..+    ||.|||+|+....                  .....|.|.||+||+|++|++.
T Consensus         5 ~~C~~~~~~~pC~NGGtC~~~~~------------------~~~~~~~C~C~~Gf~G~~Ce~~   49 (58)
T 3ltf_D            5 YKCPETFDAWYCLNDAHCFAVKI------------------ADLPVYSCECAIGFMGQRCEYK   49 (58)
T ss_dssp             BCCCHHHHHHTSCSSCEEEEEEE------------------TTEEEEEEEECTTEESSSSCEE
T ss_pred             ccCCccccCCcCCCCCEEeCCcc------------------CCCCCEEeECCCCCccCCCccc
Confidence            356544    9999999984200                  0134789999999999999865

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.99  E-value=2.8e-06  Score=67.82  Aligned_cols=38  Identities=24%  Similarity=0.503  Sum_probs=31.6

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.+.|..+||.|+++|+..                      ..+|.|.||+||+|..|..
T Consensus        47 dideC~~~pC~n~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~   84 (146)
T 1x7a_L           47 DGDQCEPNPCLNGGLCKDD----------------------INSYECWCQVGFEGKNCEL   84 (146)
T ss_dssp             ---CCSSCSSCTTCEEEEC----------------------SSCEEEECCSSEESTTTCE
T ss_pred             CcCcCCCCCCCCCCEeECC----------------------CCCEEEecCCCCcCCcCCC
Confidence            5688999999999999875                      3589999999999999974

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.96  E-value=2.2e-06  Score=68.08  Aligned_cols=37  Identities=16%  Similarity=0.470  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..|..+||.++|+|++.                      ...|.|+||+||+|..|++.
T Consensus       120 ~~c~~~~C~~~g~C~~~----------------------~~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLET----------------------IGNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             CCCCTTGGGGSEEEEEC----------------------SSSEEEEECTTEESTTSCEE
T ss_pred             CCCcCCCCCCCCEEecC----------------------CCCceEeCCCCCcCcccccC
Confidence            57999999999999986                      45899999999999999964

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.95  E-value=3e-06  Score=67.03  Aligned_cols=38  Identities=21%  Similarity=0.474  Sum_probs=33.8

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.+.|..+||.|+|+|+..                      ..+|.|.||+||+|..|..
T Consensus        46 did~C~~~pC~n~g~C~~~----------------------~g~y~C~C~~G~~G~~C~~   83 (142)
T 2c4f_L           46 DGDQCASSPCQNGGSCKDQ----------------------LQSYICFCLPAFEGRNCET   83 (142)
T ss_dssp             TCCGGGGCCCCTTCEEEEE----------------------TTEEEEECCTTEESTTSCE
T ss_pred             ccCcCcCCCcCCCCEEeCC----------------------CCCEEeeCCCCccCCcccc
Confidence            5688999999999999876                      3589999999999999974

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=97.91  E-value=3.7e-06  Score=61.53  Aligned_cols=40  Identities=15%  Similarity=0.357  Sum_probs=30.1

Q ss_pred             CCCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         156 DNLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       156 ~~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      .++|.   .++|.|| +|.-..                    ....+.|.|++||+|+||++++
T Consensus        37 ~~pC~~~~~~yClnG-~C~~i~--------------------~~~~~~C~C~~GYtG~RCE~l~   79 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHG-ECKYVK--------------------ELRAPSCICHPGYHGERCHGLS   79 (79)
T ss_dssp             --CTTTTTTTCCSSE-EECCBG--------------------GGTBCCEEECTTEESTTCCEEC
T ss_pred             CCCCCccccCcCCCC-Eeeeec--------------------CCCCeEEEcCCCcccccccccC
Confidence            46887   8999998 896421                    1346899999999999998753

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=97.89  E-value=1.6e-05  Score=61.91  Aligned_cols=39  Identities=26%  Similarity=0.669  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..+.|..+||.|+++|+..                      ..+|.|+||+||+|++|.++
T Consensus        82 ~~~~C~~~~C~~~g~C~~~----------------------~g~~~C~C~~G~~G~~C~~~  120 (135)
T 2vj3_A           82 NTDECASSPCLHNGRCLDK----------------------INEFQCECPTGFTGHLCQVD  120 (135)
T ss_dssp             ECCTTTTCCSTTTCEEEEC----------------------SSCEEEECCTTEESSSSCEE
T ss_pred             cCCcccCCCcCCCCEeECC----------------------CCCeEEECCCCCcCCccCcc
Confidence            4578999999999999875                      35799999999999999754

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=97.85  E-value=8.1e-06  Score=74.14  Aligned_cols=42  Identities=19%  Similarity=0.291  Sum_probs=35.1

Q ss_pred             cCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCC-CCCCCCcccc
Q psy2064         152 LPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPD-KFYDGLDSIL  215 (221)
Q Consensus       152 ~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~-Gf~G~~~~~~  215 (221)
                      |+...+.|..+||.|+|+|++.                      ..+|.|.||. ||+|+.|+..
T Consensus       181 C~~~~~~C~~~pC~n~g~C~~~----------------------~~~~~C~C~~~~~~G~~C~~~  223 (410)
T 3asi_A          181 CEGPSTTCQEDSCSNQGVCLQQ----------------------WDGFSCDCSMTSFSGPLCNDP  223 (410)
T ss_dssp             CCCCSSCCCTTSSSTTCEEEEC----------------------SSSEEEECTTTSEESTTSCEE
T ss_pred             CCCCCCCcccccCCCCCEecCC----------------------CCCceEeccCCcccCCCCCCC
Confidence            4445678999999999999975                      3589999996 9999999843

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.81  E-value=7.7e-06  Score=62.27  Aligned_cols=38  Identities=18%  Similarity=0.494  Sum_probs=30.5

Q ss_pred             CCCCCCCCC--------CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEP--------CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~P--------C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.+.|..+|        |.|+++|+..                      ..+|.|.||+||+|..|..
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~   50 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGTCIDG----------------------IGSFSCDCRSGWEGRFCQR   50 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEEECCC----------------------SSCCCEEECTTEESTTSCE
T ss_pred             ecccccCCCccccccccCCCcCCCCCC----------------------CCCcEeeCCCCCcCCCcCc
Confidence            346788888        9999999875                      3589999999999999884

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.77  E-value=3.4e-06  Score=71.05  Aligned_cols=38  Identities=21%  Similarity=0.522  Sum_probs=0.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ..+.|..+||.|+|+|+..                      ..+|.|.||+||+|..|..
T Consensus        41 dideC~~~pC~ngg~C~n~----------------------~g~y~C~C~~Gf~G~~Ce~   78 (195)
T 1nfu_B           41 DGDQCETSPCQNQGKCKDG----------------------LGEYTCTCLEGFEGKNCEL   78 (195)
T ss_dssp             ------------------------------------------------------------
T ss_pred             CCcccCCCCCCCCCEeECC----------------------CCCeeEeCCCCceeccccc
Confidence            5689999999999999875                      3589999999999999974

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.74  E-value=4.1e-06  Score=65.70  Aligned_cols=38  Identities=21%  Similarity=0.522  Sum_probs=0.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ..+.|..+||.|+++|+..                      ..+|.|.||+||+|..|..
T Consensus        41 d~d~C~~~pC~n~g~C~~~----------------------~~~y~C~C~~G~~G~~C~~   78 (134)
T 2vh0_B           41 DGDQCETSPCQNQGKCKDG----------------------LGEYTCTCLEGFEGKNCEL   78 (134)
T ss_dssp             ------------------------------------------------------------
T ss_pred             CcCcCCCCCCCCcCCcccC----------------------CCCEEeeCCCCccCCcccc
Confidence            4578999999999999875                      3579999999999999974

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.73  E-value=2.1e-05  Score=61.14  Aligned_cols=39  Identities=28%  Similarity=0.548  Sum_probs=34.2

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..+.|..+||.|+++|+..                      ..+|.|+||+||+|+++...
T Consensus        96 ~i~~C~~~~C~~~~~C~~~----------------------~g~~~C~C~~G~~G~~c~~~  134 (143)
T 4d90_A           96 NINECEVEPCKNGGICTDL----------------------VANYSCECPGEFMGRNCQYK  134 (143)
T ss_dssp             ECCTTTTCCSCTTCEEEEE----------------------TTEEEEECCTTCBSTTSCBC
T ss_pred             CCCcCCCCCCCCCCEeECC----------------------CCCeEeECCCCCccCCceec
Confidence            4578999999999999875                      45899999999999999854

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=97.72  E-value=2.1e-05  Score=61.26  Aligned_cols=36  Identities=17%  Similarity=0.484  Sum_probs=23.9

Q ss_pred             CCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         156 DNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       156 ~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      .+.|.  .+||.|+++|+..                      ..+|.|+||+||+|++|.
T Consensus         5 ideC~~~~~~C~~~g~C~~~----------------------~g~~~C~C~~Gy~G~~C~   42 (135)
T 2vj3_A            5 VDECSLGANPCEHAGKCINT----------------------LGSFECQCLQGYTGPRCE   42 (135)
T ss_dssp             CCTTTSSSCSSSTTCEEEEC----------------------SSSEEEECCTTEESTTSC
T ss_pred             cccccCCCCCCCCCCEeECC----------------------CCCEEEECCCCCcCCccc
Confidence            45666  5777777777764                      235677777777777665

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=97.65  E-value=2.6e-05  Score=52.19  Aligned_cols=33  Identities=15%  Similarity=0.261  Sum_probs=26.6

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ++.|.|| +|.-..                    ..+.+.|.||+||+|+||..
T Consensus        13 ~~yC~nG-~C~~~~--------------------~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           13 TQFCFHG-TCRFLV--------------------QEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             cCcccCC-EEeecc--------------------CCCCeEEECCCCCcccCCCc
Confidence            6899998 997531                    13578999999999999984

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=97.62  E-value=3.4e-05  Score=64.81  Aligned_cols=32  Identities=25%  Similarity=0.296  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ..|. .+|.|||.|+.                         ...|+||+||+|++|+.
T Consensus       149 ~~C~-~~C~ngG~Cv~-------------------------P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          149 AECP-GGCRNGGFCNE-------------------------RRICECPDGFHGPHCEG  180 (188)
T ss_dssp             CCCT-TCCCTTCEECT-------------------------TSCEECCTTCBTTTTCB
T ss_pred             CccC-CCCCCCCEeCC-------------------------CCcccCcCCCCCCCCcC
Confidence            5775 79999999986                         34799999999999985

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.62  E-value=3.5e-05  Score=59.84  Aligned_cols=44  Identities=18%  Similarity=0.355  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      ..+.|..+||.|+++|+....+..               ....+|.|+||+||+|.+|.
T Consensus        51 ~~~~C~~~~C~~~g~C~~~~~~~~---------------~~~~~~~C~C~~G~~G~~C~   94 (143)
T 4d90_A           51 SAGPCTPNPCHNGGTCEISEAYRG---------------DTFIGYVCKCPRGFNGIHCQ   94 (143)
T ss_dssp             CCCTTSSCCCCTTCEEEECCCEET---------------TEECCEEEECCTTEESTTSC
T ss_pred             cCCcCCCCCCCCCCEecCCCcccc---------------CCCCCeEeECcCCCcCCCcc
Confidence            457899999999999985311000               01358999999999999996

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=97.59  E-value=1.7e-05  Score=62.35  Aligned_cols=37  Identities=16%  Similarity=0.425  Sum_probs=32.8

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..|..+||+++|.|.+.                      ...|.|.|++||+|++|++.
T Consensus       120 ~~~~~~pc~~~g~C~~~----------------------~~~~~c~C~~g~~g~~Ce~~  156 (157)
T 1g1t_A          120 AACTNTSCSGHGECVET----------------------INNYTCKCDPGFSGLKCEQI  156 (157)
T ss_dssp             CCCCTTGGGGSEEEEEE----------------------TTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCCCCCEeecC----------------------CCCeeEECCCCccCcccccc
Confidence            67888999999999986                      35899999999999999864

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.59  E-value=6.3e-05  Score=54.02  Aligned_cols=70  Identities=30%  Similarity=0.612  Sum_probs=43.7

Q ss_pred             eccccccceeeecCCcc----ceeeecccceeecCcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceee
Q psy2064         116 SIDECDTELVVRHGSTL----GTFCANTSSYVLDSKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLF  190 (221)
Q Consensus       116 ~~deC~~~~~~~~~s~~----~~~~~~~~s~v~~~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f  190 (221)
                      .+|||.....+.++.+.    +..|.-...|.++++.+.    ..+.|. .+||.|+ +|+..                 
T Consensus         4 dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~----dideC~~~~~C~~~-~C~n~-----------------   61 (82)
T 1emn_A            4 DMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV----DTDECSVGNPCGNG-TCKNV-----------------   61 (82)
T ss_dssp             CCCSSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEE----ECCGGGTCCTTSSS-CEEEC-----------------
T ss_pred             ccccCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccC----CcccccCCCCCCCC-EeECC-----------------
Confidence            46777642222222222    234444455555444442    347886 8999985 99875                 


Q ss_pred             eccCCCCcceeeCCCCCCCCCc
Q psy2064         191 RPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       191 ~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                           ..+|.|.||+||+|...
T Consensus        62 -----~g~y~C~C~~G~~g~~~   78 (82)
T 1emn_A           62 -----IGGFECTCEEGFEPGPM   78 (82)
T ss_dssp             -----SSSEEECCSSSSCCCSS
T ss_pred             -----CCCEEeECCCCeEeCCC
Confidence                 45899999999999765

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=97.55  E-value=5.4e-05  Score=50.61  Aligned_cols=37  Identities=16%  Similarity=0.419  Sum_probs=28.3

Q ss_pred             CCCC---CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         157 NLCV---QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       157 ~~C~---~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ++|.   ++.|.|| +|.-..                    ....+.|.||.||+|+||..
T Consensus        10 ~~C~~~~~~yC~nG-~C~~i~--------------------~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           10 NPCNAEFQNFCIHG-ECKYIE--------------------HLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             CTTTTTGGGTCSSS-EEEEET--------------------TTTEEEEECCSSCCSSSCCC
T ss_pred             cccCchhhCcCCCC-EEEEec--------------------CCCCeeEECCCCcccccccc
Confidence            5776   5899996 997321                    13467999999999999974

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=97.50  E-value=4.7e-05  Score=61.14  Aligned_cols=35  Identities=31%  Similarity=0.402  Sum_probs=28.1

Q ss_pred             CCCCCcEEccceeccCCCccccccceeeeccCCCCcc-eeeCCCCCCCCCcccccc
Q psy2064         163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTF-ACVHPDKFYDGLDSILTT  217 (221)
Q Consensus       163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y-~C~CP~Gf~G~~~~~~~~  217 (221)
                      ||+|||+|+....                    ..+| .|.||+||.|++|.|+.+
T Consensus        14 pC~NGGtC~~~~~--------------------~s~~~~C~Cp~g~~G~~Cei~~~   49 (145)
T 2i9a_A           14 DCLNGGTCVSNKY--------------------FSNIHWCNCPKKFGGQHCEIDKS   49 (145)
T ss_dssp             CCCTTCEEEECSS--------------------STTCEEEECCTTEESTTSCEESS
T ss_pred             CCCCCCCcCCCcc--------------------ccCCccccCCCCCCCCceecccc
Confidence            9999999976421                    2356 899999999999998743

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=97.49  E-value=4.1e-05  Score=59.56  Aligned_cols=35  Identities=31%  Similarity=0.411  Sum_probs=26.8

Q ss_pred             CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      ||.|||+|++.+.|                   ..-+.|.||+||+|..|++..
T Consensus         2 pC~nggtC~~~~~~-------------------~~~~~C~Cp~g~~G~~Ce~~~   36 (122)
T 2fd6_A            2 DCLNGGTCVSNKYF-------------------SNIHWCNCPKKFGGQHCEIDK   36 (122)
T ss_dssp             CCCSSCEEEECTTT-------------------TTCEEEECCTTEESTTSCEES
T ss_pred             CCCCcCCcCCCccc-------------------CCCCCccCCCCCCCccccccC
Confidence            89999999875211                   111299999999999999764

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=97.43  E-value=4.1e-05  Score=51.09  Aligned_cols=34  Identities=18%  Similarity=0.385  Sum_probs=26.4

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ++.|.| |+|.-..                    ....+.|+||+||+|+||+..
T Consensus        13 ~~yC~n-G~C~~~~--------------------~~~~~~C~C~~gy~G~RCe~~   46 (50)
T 1iox_A           13 KHYCIK-GRCRFVV--------------------AEQTPSCVCDEGYIGARCERV   46 (50)
T ss_dssp             TTSCTT-CCEEEET--------------------TTTEEEECCCTTEETTTTCEE
T ss_pred             cCcccC-CEEEeEc--------------------CCCCeEEECCCCcccCCCCee
Confidence            689999 6896321                    134679999999999999854

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=97.41  E-value=8.7e-05  Score=76.64  Aligned_cols=42  Identities=19%  Similarity=0.315  Sum_probs=35.2

Q ss_pred             cCCCCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcccc
Q psy2064         152 LPFDDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSIL  215 (221)
Q Consensus       152 ~p~~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~~  215 (221)
                      |+...+.|..+||.|||+|++.                      ..+|.|.|| +||+|+.|+..
T Consensus      1013 C~~~~~~C~~~pC~ngG~C~~~----------------------~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A         1013 CEGPSTTCQEDSCSNQGVCLQQ----------------------WDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp             SSCCCCCCCTTSSSSSCEEEEE----------------------TTEEEEECTTSSCBSTTSCBC
T ss_pred             eecccCceECCcCCCCCEeCCC----------------------CCCCEEECCCCCCCCCCccCC
Confidence            4445578999999999999985                      348999999 69999999854

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=97.24  E-value=0.00017  Score=57.05  Aligned_cols=37  Identities=16%  Similarity=0.478  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+|..+||.++|+|++.                      ...|.|.|++||+|..|...
T Consensus       120 ~~~~~~~C~~~g~C~~~----------------------~~~~~c~C~~g~~g~~C~~~  156 (164)
T 3cfw_A          120 ASCQPWSCSGHGECVEI----------------------INNYTCNCDVGYYGPQCQFV  156 (164)
T ss_dssp             CCCCTTSSCSSEEEEEE----------------------TTEEEEEECTTCBSSSSCBC
T ss_pred             CCCCCCcCCCCCeeccc----------------------CCCceeeeCCCccccccccc
Confidence            46888999999999986                      35899999999999999854

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.14  E-value=0.00021  Score=51.20  Aligned_cols=36  Identities=19%  Similarity=0.490  Sum_probs=29.5

Q ss_pred             CCCCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC--CCCcc
Q psy2064         155 DDNLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY--DGLDS  213 (221)
Q Consensus       155 ~~~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~--G~~~~  213 (221)
                      +.+.|.. +||.| ++|+..                      ..+|.|.||+||+  |..|.
T Consensus         4 dideC~~~~~C~~-g~C~n~----------------------~g~y~C~C~~Gy~~~g~~C~   42 (82)
T 1emn_A            4 DMDECKEPDVCKH-GQCINT----------------------DGSYRCECPFGYILAGNECV   42 (82)
T ss_dssp             CCCSSSSTTSCSS-SEECCC----------------------SSCCCEECCTTEEEETTEEE
T ss_pred             ccccCCCCCCcCC-CEEEec----------------------CCCEEEECCCCeECCCCccC
Confidence            4578975 99998 799875                      3589999999997  88775

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.07  E-value=0.00018  Score=52.05  Aligned_cols=35  Identities=20%  Similarity=0.542  Sum_probs=27.2

Q ss_pred             CCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064         156 DNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS  213 (221)
Q Consensus       156 ~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~  213 (221)
                      .+.|..+|  | ++++|+..                      ..+|.|.||+||+    |..|.
T Consensus         3 ideC~~~~~~C-~~~~C~n~----------------------~g~y~C~C~~G~~~~~~g~~C~   43 (87)
T 1z6c_A            3 VDECSLKPSIC-GTAVCKNI----------------------PGDFECECPEGYRYNLKSKSCE   43 (87)
T ss_dssp             SCSSSSSSSSB-TTSSCCCB----------------------TTBCCCSSSTTCEEETTTTEEE
T ss_pred             cccccCCCCCC-CCCEeECC----------------------CCCEEEECCCCceECCCCCcCC
Confidence            47888777  8 88999875                      3578999999998    66664

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=96.96  E-value=2.5e-05  Score=68.89  Aligned_cols=38  Identities=16%  Similarity=0.032  Sum_probs=32.6

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      ..|.++||.|+|+|++.                      ..+|+|+||.||+|++|.+..
T Consensus       100 ~eC~s~pC~ngG~C~~~----------------------~~sy~C~C~~Gf~G~~Ce~~~  137 (267)
T 4fbr_A          100 IVAVSIKSNDGGKTLTG----------------------TTTYNGEGPIGFKSEVTDGDT  137 (267)
T ss_dssp             EEEEEEECSSTTSEEEE----------------------EEEETTSCCEEEEEEECCCCE
T ss_pred             cccCCCCCCCCCEEecC----------------------CccEEeeCCCCccccCCCCCc
Confidence            47889999999999886                      358999999999999998653

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=96.93  E-value=0.00033  Score=72.33  Aligned_cols=38  Identities=16%  Similarity=0.354  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcccc
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~~  215 (221)
                      .+.|.++||.|+|+|++.                      ..+|.|.|| .||+|+.|+..
T Consensus       619 ~~~C~~~pC~ngg~C~~~----------------------~~~~~C~C~~~g~~G~~C~~~  657 (1245)
T 3qcw_A          619 AKPCLSNPCKNNGMCRDG----------------------WNRYVCDCSGTGYLGRSCERE  657 (1245)
T ss_dssp             SCGGGSCCCCTTCEEEEC----------------------SSSEEEECTTTTEESTTSCEE
T ss_pred             CCCCCccCCCCCCEEeCC----------------------CCCeEEECCCCCcccccCccc
Confidence            478999999999999975                      358999999 79999999753

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=96.93  E-value=0.0003  Score=56.90  Aligned_cols=37  Identities=27%  Similarity=0.604  Sum_probs=29.5

Q ss_pred             CCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         157 NLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       157 ~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.|.. +||.|+++|+..                     ...+|.|+||+||+|++|++
T Consensus       132 ~~C~~~~~C~~~g~C~~~---------------------~~~~~~C~C~~G~~G~~Ce~  169 (169)
T 2vj2_A          132 NYCGTHQPCLNGGTCSNT---------------------GPDKYQCSCPEGYSGPNCEI  169 (169)
T ss_dssp             CHHHHTCCCCTTCEEEEC---------------------STTCEEEECCTTCCSTTSCC
T ss_pred             CCCCCCCCCCCCCEEcCC---------------------CCCCcEeECCCCCcCcCcCC
Confidence            45653 899999999864                     13579999999999999864

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=96.90  E-value=0.00037  Score=50.22  Aligned_cols=35  Identities=23%  Similarity=0.365  Sum_probs=27.7

Q ss_pred             CCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC-----CCCcc
Q psy2064         156 DNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY-----DGLDS  213 (221)
Q Consensus       156 ~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~-----G~~~~  213 (221)
                      .+.|..+|  |.|+ +|+..                      ..+|.|.||+||+     |..|.
T Consensus         3 ideC~~~~~~C~~g-~C~n~----------------------~g~y~C~C~~Gy~~~~~~g~~C~   44 (86)
T 1lmj_A            3 IDECRISPDLCGRG-QCVNT----------------------PGDFECKCDEGYESGFMMMKNCM   44 (86)
T ss_dssp             CCTTTTCSSTTTTS-CEEEE----------------------TTEEEECCCSSEEECTTTSSSEE
T ss_pred             cccccCCCCCCCCC-EEECC----------------------CCCEEeeCCCCcCccCCCCCccC
Confidence            47887766  9876 99876                      4589999999998     66664

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=96.88  E-value=0.00028  Score=57.37  Aligned_cols=39  Identities=10%  Similarity=0.261  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC-----CCcc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD-----GLDS  213 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G-----~~~~  213 (221)
                      +.|..+||.|+++|+..-.                  ....+|.|.||+||+|     ..|.
T Consensus        92 d~C~~~~C~~~g~C~~~~~------------------~~~g~~~C~C~~Gy~g~~~~~~~C~  135 (186)
T 1z1y_A           92 DVCQYXNCGESGECIVEYL------------------SEIQSAGCSCAIGXVPNPEDEXXCT  135 (186)
T ss_dssp             GGGTTCCCCTTEEEEEEEE------------------TTEEEEEEEECTEEEEETTTTTEEE
T ss_pred             CcCcCCCCCCCCEEeeCCc------------------CCCCCceEECCCCCcccCCCCCcce
Confidence            7899999999999983210                  0134799999999998     6665

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=96.86  E-value=0.0005  Score=67.04  Aligned_cols=37  Identities=24%  Similarity=0.644  Sum_probs=31.8

Q ss_pred             CCCCCCCCC--CCCCc---EEccceeccCCCccccccceeeeccCCCCcceee-CCCCCCCCCcc
Q psy2064         155 DDNLCVQEP--CLNYE---QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACV-HPDKFYDGLDS  213 (221)
Q Consensus       155 ~~~~C~~~P--C~ngg---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~-CP~Gf~G~~~~  213 (221)
                      ..+.|..+|  |.+++   +|+..                      ..+|+|. ||+||+|..|.
T Consensus        43 DiDEC~~~p~~C~~gg~~~~CvNt----------------------~gsY~C~~C~~Gy~G~~c~   85 (634)
T 1yo8_A           43 DLDECALVPDICFSTSKVPRCVNT----------------------QPGFHCLPCPPRYRGNQPV   85 (634)
T ss_dssp             BCCTTTTSCCCSCCCSSSCCEEEC----------------------SSSEEECCCCTTEEECCCE
T ss_pred             ccccccCCCCcccCCccccceeec----------------------cCceecccCCCCcccCccc
Confidence            458899888  99999   99875                      4589999 99999999865

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=96.81  E-value=0.00066  Score=55.18  Aligned_cols=56  Identities=18%  Similarity=0.366  Sum_probs=38.8

Q ss_pred             eeecccceee---cCcceeecCCCCCCCCCCCC-CCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064         135 FCANTSSYVL---DSKEVEVLPFDDNLCVQEPC-LNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG  210 (221)
Q Consensus       135 ~~~~~~s~v~---~~~~~~v~p~~~~~C~~~PC-~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~  210 (221)
                      .|.-...|..   +...+..  ...+.|. +|| .++++|+..                      ..+|+|.||+||+|.
T Consensus       117 ~C~C~~Gy~g~~~~~~~C~~--~~~~~C~-~~C~~~~~~C~n~----------------------~g~y~C~C~~G~~g~  171 (186)
T 1z1y_A          117 GCSCAIGXVPNPEDEXXCTX--TGETACQ-LXCNTDNEVCXNV----------------------EGVYXCQCMEGFTFD  171 (186)
T ss_dssp             EEEECTEEEEETTTTTEEEE--EECCCCC-CCCCTTTEEEEEE----------------------TTEEEEEECTTCEEE
T ss_pred             eEECCCCCcccCCCCCcceE--cCCCccc-ccccccCcceecC----------------------CCCeeeECCCCCccC
Confidence            3444445555   2244432  1236787 499 999999875                      458999999999999


Q ss_pred             Ccccc
Q psy2064         211 LDSIL  215 (221)
Q Consensus       211 ~~~~~  215 (221)
                      .+...
T Consensus       172 ~~~~~  176 (186)
T 1z1y_A          172 XEXNV  176 (186)
T ss_dssp             TTTTE
T ss_pred             ccccc
Confidence            88754

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=96.65  E-value=0.00063  Score=53.01  Aligned_cols=41  Identities=17%  Similarity=0.324  Sum_probs=33.1

Q ss_pred             CCCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064         155 DDNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT  217 (221)
Q Consensus       155 ~~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~  217 (221)
                      ..+.|.  .+||.++++|+..                      ..+|.|.||+||+|..+.-.|.
T Consensus        95 dideC~~~~~~C~~~~~C~n~----------------------~g~y~C~C~~Gy~g~~~~~~C~  137 (143)
T 2bou_A           95 DVDECSSGQHQCDSSTVCFNT----------------------VGSYSCRCRPGWKPRHGIPNNQ  137 (143)
T ss_dssp             ECCHHHHTCCCCCTTSEEEEC----------------------SSCEEEECCSSSCBCTTCCSSB
T ss_pred             CccCccCcCCCCCCCCEEECC----------------------CCCEEeeCCCCcccCCCCccCc
Confidence            346776  4899999999875                      4689999999999998875543

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.48  E-value=0.0021  Score=41.79  Aligned_cols=18  Identities=17%  Similarity=0.207  Sum_probs=14.4

Q ss_pred             CCcceeeCCCCCCCCCcc
Q psy2064         196 VSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~~~~  213 (221)
                      ..+|.|.||+||+|....
T Consensus        30 ~Gsy~C~C~~Gy~~~~d~   47 (53)
T 1apq_A           30 VGGYFCSCRPGYELQEDR   47 (53)
T ss_dssp             TTEEEEECSTTCEECTTS
T ss_pred             CCCeEEECCCCCeECCCC
Confidence            468999999999875443

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=96.27  E-value=0.0012  Score=51.37  Aligned_cols=36  Identities=19%  Similarity=0.446  Sum_probs=28.9

Q ss_pred             CCCCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064         155 DDNLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       155 ~~~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                      ..+.|...   ||.++++|+..                      ..+|.|.||+||+|..+
T Consensus        43 dideC~~~~~~~C~~~~~C~n~----------------------~g~y~C~C~~Gy~g~~~   81 (143)
T 2bou_A           43 DINECATLSKVSCGKFSDCWNT----------------------EGSYDCVCSPGYEPVSG   81 (143)
T ss_dssp             ECCGGGC----CCCTTEEEEEC----------------------SSCEEEEECTTEEETTC
T ss_pred             ccccccCCCCCCCCCCCEEEcC----------------------CCCeEeECCCCcccCcC
Confidence            34788764   99999999875                      35899999999999744

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=96.17  E-value=0.0016  Score=46.80  Aligned_cols=36  Identities=19%  Similarity=0.431  Sum_probs=27.8

Q ss_pred             CCCCCCCCC--CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         155 DDNLCVQEP--CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       155 ~~~~C~~~P--C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      +.+.|..+|  |. +++|+.+                      ..+|.|.||+||+|....
T Consensus        45 dideC~~~~~~C~-~~~C~n~----------------------~g~y~C~C~~G~~~~~~~   82 (86)
T 1lmj_A           45 DIDECQRDPLLCR-GGVCHNT----------------------EGSYRCECPPGHQLSPNI   82 (86)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEE----------------------TTEEEEESCTTSCCCSSS
T ss_pred             CcccccCCCCcCC-CCEeEcC----------------------CCCEEEECcCCcccCCCC
Confidence            457887777  65 5799976                      468999999999986543

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=96.13  E-value=0.0015  Score=49.75  Aligned_cols=34  Identities=21%  Similarity=0.471  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      +.+.|..+||.+  +|+..                     ...+|.|.||+||+|..
T Consensus         3 dideC~~~pC~~--~C~~~---------------------~~g~y~C~C~~Gy~g~~   36 (118)
T 1dx5_I            3 PVDPCFRANCEY--QCQPL---------------------DQTSYLCVCAEGFAPIP   36 (118)
T ss_dssp             CCCGGGGCCCSS--EEEEC---------------------SSSCEEEECCTTEEEET
T ss_pred             ccccCCCCCCCC--CCCCC---------------------CCCCEEeECCCCccccC
Confidence            347788888885  88764                     02367777777777764

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=96.11  E-value=0.0049  Score=53.59  Aligned_cols=36  Identities=19%  Similarity=0.510  Sum_probs=27.7

Q ss_pred             CCCCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         154 FDDNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       154 ~~~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      .+.+.|..   +||.|  .|+..                      ..+|.|.||+||+|....
T Consensus        41 ~~~~eC~~~~~~~C~~--~C~~~----------------------~g~~~C~C~~g~~~~~~~   79 (317)
T 3h5c_B           41 LAKNECHPERTDGCQH--FCLPG----------------------QESYTCSCAQGYRLGEDH   79 (317)
T ss_dssp             CCSSSCCTTCTTSCSS--EEECC----------------------SSSCEEECCTTEECCTTS
T ss_pred             cCcccCCCCCCCCCcC--ccccC----------------------CCeeEEeccccccccccc
Confidence            35678876   89998  89875                      458999999999886543

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=96.11  E-value=0.0015  Score=51.07  Aligned_cols=36  Identities=25%  Similarity=0.398  Sum_probs=28.1

Q ss_pred             CCCCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         155 DDNLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       155 ~~~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      ..+.|..+  +|.|+ +|+..                      ..+|.|.||+||+|....
T Consensus       106 dideC~~~~~~C~~g-~C~n~----------------------~g~y~C~C~~Gy~g~~~~  143 (147)
T 2w86_A          106 DIDECEVFPGVCKNG-LCVNT----------------------RGSFKCQCPSGMTLDATG  143 (147)
T ss_dssp             ECCHHHHSTTCSSSS-EEEEE----------------------TTEEEEECCTTCCBCTTS
T ss_pred             ccccccCCCCCCCCC-EEECC----------------------CCCEEeeCCCCCccCCCC
Confidence            35778754  49986 99886                      468999999999987643

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=96.11  E-value=0.0022  Score=59.35  Aligned_cols=37  Identities=22%  Similarity=0.380  Sum_probs=29.5

Q ss_pred             CCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064         157 NLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT  217 (221)
Q Consensus       157 ~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~  217 (221)
                      +.|..  .||.|+|+|.+.                        ++.|+||+||+|++|+..|+
T Consensus       196 ~~C~~~C~~C~~~G~C~~~------------------------~g~C~C~~G~~G~~Ce~~C~  234 (423)
T 2gy5_A          196 PECNHLCTACMNNGVCHED------------------------TGECICPPGFMGRTCEKACE  234 (423)
T ss_dssp             TTSCEECCCCCTTCEECTT------------------------TCCEECCTTEESTTSCEECC
T ss_pred             CCCCCCCCCCCCCCEEECC------------------------CCcEeCCCCccCCCcccccC
Confidence            45554  399999999753                        57899999999999996543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.99  E-value=0.0012  Score=61.54  Aligned_cols=33  Identities=15%  Similarity=0.330  Sum_probs=1.9

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      +.|.. ||.|+|+|+.                         .+.|.|++||+|++|+..
T Consensus       424 ~~C~~-~C~~~g~C~~-------------------------~~~C~C~~G~~G~~C~~~  456 (463)
T 2wg3_C          424 AKCEP-ACRHGGVCVR-------------------------PNKCLCKKGYLGPQCEQV  456 (463)
T ss_dssp             ECC--------------------------------------------------------
T ss_pred             CcCCC-CCCCCCEECC-------------------------CCEEECCCCcccCCCCCC
Confidence            46766 9999999974                         258999999999999853

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=95.65  E-value=0.00039  Score=61.20  Aligned_cols=35  Identities=17%  Similarity=0.045  Sum_probs=26.3

Q ss_pred             CCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         159 CVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       159 C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      |...||.|+|+|++.                      ...|.|+||+||+|.+|...
T Consensus       169 c~~~~c~ngg~C~dg----------------------~~~y~C~Cp~Gf~G~~c~~~  203 (267)
T 4fbr_A          169 NVDAKSNDGGKTLSG----------------------TMTYNGEGPIGFRGTLTSPD  203 (267)
T ss_dssp             EEEEECSSTTSEEEE----------------------EEEETTSCCEEEEEEEEETT
T ss_pred             cCCCCCCCCCEeeCC----------------------CCCeEEeCCCCccccccccc
Confidence            445667777777664                      34899999999999998843

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=95.61  E-value=0.0031  Score=50.10  Aligned_cols=37  Identities=24%  Similarity=0.620  Sum_probs=28.6

Q ss_pred             CCCCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.+.|..  +||.| ++|+..                      ..+|+|.||+||+|....-
T Consensus       121 dideC~~~~~~C~~-g~C~n~----------------------~gsy~C~C~~Gy~g~~d~~  159 (162)
T 1uzk_A          121 DIDECQELPGLCQG-GKCINT----------------------FGSFQCRCPTGYYLNEDTR  159 (162)
T ss_dssp             ECCHHHHCGGGGBT-SEEEEC----------------------SSCEEEECCTTCCBCTTTC
T ss_pred             ccccccCCCCCcCC-CEeEcC----------------------CCCEEeeCCCCccCCCCCC
Confidence            4567864  56998 599976                      4689999999999976543

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=95.59  E-value=0.0045  Score=46.63  Aligned_cols=51  Identities=20%  Similarity=0.457  Sum_probs=7.2

Q ss_pred             eeecccceeec-CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064         135 FCANTSSYVLD-SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       135 ~~~~~~s~v~~-~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                      .|.-...|.+. .+.+.    +.+.|. .+||.  ++|+..                      ..+|.|.||+||+|...
T Consensus        51 ~C~C~~Gy~g~~g~~C~----dideC~~~~~C~--~~C~n~----------------------~gsy~C~C~~Gy~~~~d  102 (107)
T 2w2n_E           51 ECLCPDGFQLVAQRRCE----DIDECQDPDTCS--QLCVNL----------------------EGGYKCQCEEGFQLDPH  102 (107)
T ss_dssp             EEECCTTCEEETTTEEE----C----------------------------------------------------------
T ss_pred             EEECCCCccccCCCccc----cccccCCCCCcC--CeeecC----------------------CCCEEEECCCCceECCC
Confidence            45445555542 22332    457886 48896  699876                      45899999999998654


Q ss_pred             c
Q psy2064         213 S  213 (221)
Q Consensus       213 ~  213 (221)
                      .
T Consensus       103 ~  103 (107)
T 2w2n_E          103 T  103 (107)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=95.58  E-value=0.0044  Score=46.69  Aligned_cols=37  Identities=19%  Similarity=0.323  Sum_probs=26.7

Q ss_pred             CCCCCCCCCCCCC--c---EEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC---CCcc
Q psy2064         155 DDNLCVQEPCLNY--E---QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD---GLDS  213 (221)
Q Consensus       155 ~~~~C~~~PC~ng--g---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G---~~~~  213 (221)
                      ..+.|..+||.++  +   +|+..                      ..+|.|.||+||+|   ..|.
T Consensus        23 ~~~~Cd~neC~~~~~~C~~~C~n~----------------------~g~y~C~C~~Gy~g~~g~~C~   67 (107)
T 2w2n_E           23 FQGAMGTNECLDNNGGCSYVCNDL----------------------KIGYECLCPDGFQLVAQRRCE   67 (107)
T ss_dssp             CSCCBSCCGGGTGGGGCSSEEECC----------------------SBSCEEECCTTCEEETTTEEE
T ss_pred             CCCCCcCccCcCCCCCCCCEeEeC----------------------CCCeEEECCCCccccCCCccc
Confidence            4456777777643  3   78764                      35899999999998   5665

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=95.50  E-value=0.013  Score=52.81  Aligned_cols=52  Identities=19%  Similarity=0.429  Sum_probs=35.9

Q ss_pred             eeeecccceeec-CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         134 TFCANTSSYVLD-SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       134 ~~~~~~~s~v~~-~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      ..|....-|.+. .+.+.    +.+.|. ..||.+  .|+..                      ..+|.|.|++||++..
T Consensus        21 y~C~C~~G~~~~~~~~C~----dideC~~~~~C~~--~C~n~----------------------~g~~~C~C~~g~~~~~   72 (400)
T 3p5b_L           21 YECLCPDGFQLVAQRRCE----DIDECQDPDTCSQ--LCVNL----------------------EGGYKCQCEEGFQLDP   72 (400)
T ss_dssp             EEEECCTTEEECSSSCEE----ECCCCSTTSSCSS--CCBCC----------------------SSSCBCCCCTTCCCCT
T ss_pred             eEEECCCCCCcCCCCccc----CchhhhccCCCCC--ccCCC----------------------ccceeeeccccccccc
Confidence            456666667652 33442    457886 578876  89875                      4689999999999875


Q ss_pred             cc
Q psy2064         212 DS  213 (221)
Q Consensus       212 ~~  213 (221)
                      ..
T Consensus        73 ~~   74 (400)
T 3p5b_L           73 HT   74 (400)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=95.06  E-value=0.01  Score=52.87  Aligned_cols=15  Identities=27%  Similarity=0.461  Sum_probs=11.5

Q ss_pred             CCCCCCCCCCCcEEcc
Q psy2064         157 NLCVQEPCLNYEQCVT  172 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~  172 (221)
                      ..| ++||.|+|+|..
T Consensus       149 ~~C-~~~C~~~G~C~~  163 (324)
T 2ygq_A          149 AEC-PGGCRNGGFCNE  163 (324)
T ss_dssp             CCC-SSCCCSSCEECT
T ss_pred             CCC-CCCCCCCCEECC
Confidence            456 478999999975

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=94.95  E-value=0.0094  Score=42.80  Aligned_cols=35  Identities=17%  Similarity=0.276  Sum_probs=28.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ..+.|..+||.  ++|+..                      ..+|.|.|| |+.|-++..
T Consensus        44 dideC~~~~C~--~~C~n~----------------------~g~y~C~C~-g~~G~~~~~   78 (87)
T 1z6c_A           44 DIDECSENMCA--QLCVNY----------------------PGGYTCYCD-GKKGFKLAQ   78 (87)
T ss_dssp             CCCHHHHSCCS--SEECCC----------------------SSSCCEECC-SSSCCBCCT
T ss_pred             CcCeeCCCCCC--CEEEcc----------------------CCCEEEECC-CCcCCcccC
Confidence            45788889997  699875                      458999999 888877654

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=94.94  E-value=0.011  Score=57.76  Aligned_cols=41  Identities=12%  Similarity=0.383  Sum_probs=31.3

Q ss_pred             CCCCCCC--CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC--CCcc
Q psy2064         155 DDNLCVQ--EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD--GLDS  213 (221)
Q Consensus       155 ~~~~C~~--~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G--~~~~  213 (221)
                      ..+.|..  +||.++++|+....                  ....+|.|+||+||+|  ..|.
T Consensus       101 dideC~~~~~pC~~~~~Cvnt~~------------------~~~GsY~C~C~~Gy~GdG~~Ce  145 (634)
T 1yo8_A          101 PENPCKDKTHNCHKHAECIYLGH------------------FSDPMYKCECQTGYAGDGLICG  145 (634)
T ss_dssp             ECCTTTTTCCCCCTTEEEEECCT------------------TCSSSEEEEECTTEEESSSSEE
T ss_pred             ccccccCCCcccccCcccccccc------------------ccccceeeeccCCccccCcccc
Confidence            3578874  69999999987520                  1136899999999998  6775

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=94.84  E-value=0.016  Score=43.53  Aligned_cols=16  Identities=19%  Similarity=0.123  Sum_probs=13.1

Q ss_pred             CCcceeeCCCCCCCCC
Q psy2064         196 VSTFACVHPDKFYDGL  211 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~~  211 (221)
                      ..+|.|.||+||+|..
T Consensus        72 ~g~y~C~C~~G~~~~~   87 (114)
T 1aut_L           72 VGWRRCSCAPGYKLGD   87 (114)
T ss_dssp             SSSEEEECCTTEEECT
T ss_pred             CCCEEeECCCCeeECC
Confidence            4689999999999543

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=94.83  E-value=0.0057  Score=46.46  Aligned_cols=34  Identities=21%  Similarity=0.322  Sum_probs=27.1

Q ss_pred             CCCCCCC-CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCc
Q psy2064         155 DDNLCVQ-EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLD  212 (221)
Q Consensus       155 ~~~~C~~-~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~  212 (221)
                      ..+.|.. +||  +++|+..                      ..+|.|.||+||+|...
T Consensus        79 dideC~~~~~C--~~~C~n~----------------------~g~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           79 DIDECENGGFC--SGVCHNL----------------------PGTFECICGPDSALAGQ  113 (118)
T ss_dssp             ECCHHHHCSSC--SSEEEEC----------------------SSSEEEEECSSSSCEEE
T ss_pred             cccccCCCCCC--cCeEEeC----------------------CCCEEEECCCCCccCCC
Confidence            4577876 899  7899875                      46899999999998643

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=94.65  E-value=0.0086  Score=58.86  Aligned_cols=36  Identities=17%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcce---eeCCCCCCCCCcccc
Q psy2064         158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFA---CVHPDKFYDGLDSIL  215 (221)
Q Consensus       158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~---C~CP~Gf~G~~~~~~  215 (221)
                      .|..+||.|++.|...                      .+.|.   |.|++||+|++|+..
T Consensus       436 ~C~~~pc~n~~~C~~g----------------------~G~~~~G~C~C~~Gy~G~~Ce~~  474 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNG----------------------NGTFECGVCRCGPGWLGSQCECS  474 (690)
T ss_dssp             GGGTTCCTTCTTTTTT----------------------SEEEETTEEEECTTCCSSSSCCS
T ss_pred             CCcCCCCCCCCcccCC----------------------CCeEeCCceEeCCCccCCceeec
Confidence            6789999999999853                      12455   999999999999754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=94.63  E-value=0.0083  Score=53.57  Aligned_cols=70  Identities=17%  Similarity=0.303  Sum_probs=18.6

Q ss_pred             eccccccceeeecCCcc---c-eeeecccceeec--CcceeecCCCCCCCC-CCCCCCCcEEccceeccCCCccccccce
Q psy2064         116 SIDECDTELVVRHGSTL---G-TFCANTSSYVLD--SKEVEVLPFDDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSV  188 (221)
Q Consensus       116 ~~deC~~~~~~~~~s~~---~-~~~~~~~s~v~~--~~~~~v~p~~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~  188 (221)
                      .+|||......+...|.   | ..|....-|.+.  .+.+    .+.+.|. ..||.++  |+.+               
T Consensus         2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C----~d~~eC~~~~~C~~~--C~~~---------------   60 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC----QDVNECAEEGYCSQG--CTNS---------------   60 (386)
T ss_dssp             ------------------------------------------------------CCTTE--EC-----------------
T ss_pred             CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc----CccceeCCcCcccCc--CCCC---------------
Confidence            35677654322222222   1 345555555532  2233    3557885 6899876  9875               


Q ss_pred             eeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064         189 LFRPIYPVSTFACVHPDKFY----DGLDS  213 (221)
Q Consensus       189 ~f~~~~~~~~y~C~CP~Gf~----G~~~~  213 (221)
                             ..+|.|.|++||+    |..|.
T Consensus        61 -------~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           61 -------EGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             ----------CCEECCTTEEECTTSSCEE
T ss_pred             -------CCCCeEEECCCceEcCCCCeEC
Confidence                   4589999999998    66664

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=94.35  E-value=0.02  Score=51.00  Aligned_cols=16  Identities=19%  Similarity=0.241  Sum_probs=11.0

Q ss_pred             ceeeCCCCCCCCCccc
Q psy2064         199 FACVHPDKFYDGLDSI  214 (221)
Q Consensus       199 y~C~CP~Gf~G~~~~~  214 (221)
                      +.|.|++||+|++|.+
T Consensus       229 ~~C~C~~G~~G~~C~~  244 (324)
T 2ygq_A          229 GKCICPPGLEGEQCEI  244 (324)
T ss_dssp             SCBCCCTTCCTTTTC-
T ss_pred             CeeeCCCCccCCCCCc
Confidence            5677777777777764

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=94.12  E-value=0.028  Score=51.90  Aligned_cols=36  Identities=19%  Similarity=0.401  Sum_probs=28.4

Q ss_pred             CCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccccc
Q psy2064         158 LCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTT  217 (221)
Q Consensus       158 ~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~  217 (221)
                      .|. ..+|.+++.|.+                        .+|.|.|++||+|.+|...|.
T Consensus       245 ~C~~~~~C~~~g~C~~------------------------~~~~C~C~~G~~G~~C~~~C~  281 (423)
T 2gy5_A          245 RCSGQEGCKSYVFCLP------------------------DPYGCSCATGWKGLQCNEACH  281 (423)
T ss_dssp             ECCSTTTTTTCCEEET------------------------TTTEEECCBTCBSGGGCBCCC
T ss_pred             cCCCCCCCCCCCEECC------------------------CCCeEEeCCCcccccccCccC
Confidence            454 578999999954                        378999999999999987543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=93.90  E-value=0.023  Score=44.43  Aligned_cols=35  Identities=9%  Similarity=-0.041  Sum_probs=26.7

Q ss_pred             CCCCCCCCCCCc---EEccceeccCCCccccccceeeeccCCCC-cceeeCCCCCC----CCCcc
Q psy2064         157 NLCVQEPCLNYE---QCVTVLKFGNASGFVASDSVLFRPIYPVS-TFACVHPDKFY----DGLDS  213 (221)
Q Consensus       157 ~~C~~~PC~ngg---~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~-~y~C~CP~Gf~----G~~~~  213 (221)
                      +.|...||.|++   +|+..                      .. +|.|.||+||+    |..|.
T Consensus        86 ~~c~~c~~~~~~C~~~C~~~----------------------~g~~y~C~C~~Gy~l~~dG~~C~  128 (142)
T 2c4f_L           86 DDQLICVNENGGCEQYCSDH----------------------TGTKRSCRCHEGYSLLADGVSCT  128 (142)
T ss_dssp             GGCCSTTTGGGGCSSEEECC----------------------TTSCCEEECCTTEEECTTSSCEE
T ss_pred             cccccccCCCCCccCEeECC----------------------CCCCEEEECCCCceECCCCCCCC
Confidence            344445677777   99875                      34 89999999999    88876

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=93.90  E-value=0.0074  Score=56.24  Aligned_cols=19  Identities=5%  Similarity=0.011  Sum_probs=15.5

Q ss_pred             ceeeCCCCCCCCCcccc-cc
Q psy2064         199 FACVHPDKFYDGLDSIL-TT  217 (221)
Q Consensus       199 y~C~CP~Gf~G~~~~~~-~~  217 (221)
                      +.|+|++||+|+.|.+. |.
T Consensus       408 ~~C~C~~G~~G~~C~~~~C~  427 (463)
T 2wg3_C          408 GKCCCSPGWEGDFCRTAKCE  427 (463)
T ss_dssp             SCEEECTTEESTTSCEECC-
T ss_pred             CeECCCCCcCCCcCCcCcCC
Confidence            47999999999999854 54

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=93.87  E-value=0.027  Score=39.56  Aligned_cols=18  Identities=28%  Similarity=0.645  Sum_probs=13.6

Q ss_pred             CCCCC--CCCCCCCcEEccc
Q psy2064         156 DNLCV--QEPCLNYEQCVTV  173 (221)
Q Consensus       156 ~~~C~--~~PC~ngg~Cv~~  173 (221)
                      .+.|.  .++|.++++|+.+
T Consensus         3 idEC~~~~~~C~~~~~C~Nt   22 (71)
T 2kl7_A            3 VNECLTIPEACKGEMKCINH   22 (71)
T ss_dssp             SCCTTCCCCSCTTEEEEEET
T ss_pred             cccccCCCCCCCCCCEeECC
Confidence            45675  3679999999876

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=93.79  E-value=0.045  Score=53.81  Aligned_cols=35  Identities=17%  Similarity=0.294  Sum_probs=28.2

Q ss_pred             CCCCCCCC---CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeC-CCCCCCCCccc
Q psy2064         154 FDDNLCVQ---EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVH-PDKFYDGLDSI  214 (221)
Q Consensus       154 ~~~~~C~~---~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~C-P~Gf~G~~~~~  214 (221)
                      ...+.|..   .||.|+|+|+.                          ..|.| ++||+|++|+.
T Consensus       562 ~~~~~C~~~~g~~C~~~G~C~~--------------------------g~C~C~~~Gy~G~~Ce~  600 (690)
T 3fcs_B          562 TRTDTCMSSNGLLCSGRGKCEC--------------------------GSCVCIQPGSYGDTCEK  600 (690)
T ss_dssp             CCCTTTBCTTSSBTSSSCEEET--------------------------TEEECCSTTCBSTTSCB
T ss_pred             CCCCcccCCCCCCCCCCCEEeC--------------------------CEEECCCCCccCCCcCc
Confidence            34567765   78999999953                          27999 99999999987

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.39  E-value=0.014  Score=54.37  Aligned_cols=27  Identities=22%  Similarity=0.383  Sum_probs=0.0

Q ss_pred             CCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         162 EPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       162 ~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      .||.|||+|.+.                        . .|+||+||+|..|.
T Consensus       371 ~~C~ngg~C~~~------------------------~-~C~C~~G~~G~~Ce  397 (426)
T 3zyj_B          371 LHCQNGGTCHNN------------------------V-RCLCPAAYTGILCE  397 (426)
T ss_dssp             ----------------------------------------------------
T ss_pred             ccCCCCCCcCCC------------------------C-CCcCCCCCcCCCCc
Confidence            689999999864                        2 89999999999887

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=93.19  E-value=0.026  Score=47.18  Aligned_cols=33  Identities=15%  Similarity=0.345  Sum_probs=26.2

Q ss_pred             CCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064         157 NLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS  213 (221)
Q Consensus       157 ~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~  213 (221)
                      +.|..+  ||.+  +|+..                      .++|.|.||+||+    |..|.
T Consensus        82 deC~~~~~~C~~--~C~n~----------------------~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           82 KLCSLDNGDCDQ--FCHEE----------------------QNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             CGGGTGGGGCSS--EEEEE----------------------TTEEEEECCTTEEECTTSSCEE
T ss_pred             ccccCCCCCCCC--EeECC----------------------CCCeEEECCCCceeCCCCCccc
Confidence            668754  5665  99875                      4689999999999    88887

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=92.80  E-value=0.026  Score=45.32  Aligned_cols=17  Identities=12%  Similarity=0.270  Sum_probs=14.6

Q ss_pred             cceeeCCCCCCCCCccc
Q psy2064         198 TFACVHPDKFYDGLDSI  214 (221)
Q Consensus       198 ~y~C~CP~Gf~G~~~~~  214 (221)
                      .|.|+|++||+|+.|..
T Consensus       113 ~~~C~C~~G~~G~~C~~  129 (169)
T 2vj2_A          113 PWQCLCETNWGGQLCDK  129 (169)
T ss_dssp             TTCCEECTTEETTTTCE
T ss_pred             CCEEeCCCCCCCCcccC
Confidence            57899999999999874

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=92.80  E-value=0.033  Score=43.94  Aligned_cols=18  Identities=11%  Similarity=0.084  Sum_probs=15.6

Q ss_pred             CCcceeeCCCCCC----CCCcc
Q psy2064         196 VSTFACVHPDKFY----DGLDS  213 (221)
Q Consensus       196 ~~~y~C~CP~Gf~----G~~~~  213 (221)
                      ..+|.|.||+||+    |..|.
T Consensus       104 ~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L          104 DSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             SSCCCCBCCTTEEECTTSSSEE
T ss_pred             CCCEEeEcCCCcEeCCCCCcCC
Confidence            4689999999999    88776

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=92.45  E-value=0.039  Score=42.73  Aligned_cols=33  Identities=15%  Similarity=0.345  Sum_probs=25.6

Q ss_pred             CCCCCC--CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC----CCCcc
Q psy2064         157 NLCVQE--PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY----DGLDS  213 (221)
Q Consensus       157 ~~C~~~--PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~----G~~~~  213 (221)
                      +.|..+  ||.+  +|+..                      ..+|.|.||+||+    |..|.
T Consensus        82 d~C~~~~~~C~~--~C~~~----------------------~g~y~C~C~~Gy~l~~~g~~C~  120 (134)
T 2vh0_B           82 KLCSLDNGDCDQ--FCHEE----------------------QNSVVCSCARGYTLADNGKACI  120 (134)
T ss_dssp             CGGGTGGGGCSS--EEEEE----------------------TTEEEEECCTTEEECTTSSCEE
T ss_pred             CccccCCCCCCC--EeECC----------------------CCCEEEECCCCcEECCCCCccC
Confidence            567653  4665  89875                      3589999999999    88886

>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A

Probab=92.38  E-value=0.82  Score=34.39  Aligned_cols=77  Identities=12%  Similarity=0.131  Sum_probs=60.1

Q ss_pred             hhhhHHH-HHHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHHHHHhHHHHHhhhhhh
Q psy2064          16 EAFLSPL-LNFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQ   94 (221)
Q Consensus        16 EeFl~~~-~~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~l~~~r~~L~~~~~~~   94 (221)
                      .+|++.. =.++++.|+++|+++.....=+||...        .|.|=|+..+- =+.+..+..+....|.+|       
T Consensus        18 ~~~l~~~~G~~l~~~la~~l~l~~~~F~~isV~g~--------aVTFrV~~N~~-n~taadVA~~a~~~K~~L-------   81 (99)
T 4hti_A           18 RDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLGP--------AVTFKVSANVQ-NVTTEDVEKATVDNKDKL-------   81 (99)
T ss_dssp             CSSCCHHHHHHHHHHHHHHTTCCGGGEEEEEEETT--------EEEEEECCCTT-CCCHHHHHHHHHHTHHHH-------
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCchhheeeeeecCc--------eEEEEeccCCC-CCCHHHHHHHHHHHHHHH-------
Confidence            4455542 356999999999999888888888832        37788876653 678888888888899999       


Q ss_pred             HHHhhhhhhhhhhhcceeeeeecc
Q psy2064          95 ERVYLNRGILARLATVQSATLSID  118 (221)
Q Consensus        95 ~~~~~~~~~~e~~lg~~i~~v~~d  118 (221)
                                |+.+|+.|.+-+++
T Consensus        82 ----------e~~tG~~I~~aGvG   95 (99)
T 4hti_A           82 ----------EETSGLKILQTGVG   95 (99)
T ss_dssp             ----------HHHHSSCEEEEEEC
T ss_pred             ----------HHhhCeEEEecccc
Confidence                      89999999876654

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=92.01  E-value=0.074  Score=52.27  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=27.0

Q ss_pred             CCCCCCC---CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         156 DNLCVQE---PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       156 ~~~C~~~---PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ...|...   +|.++|+|+.                          ..|+|++||+|++|+.
T Consensus       557 ~~~C~~~~g~~Cs~~G~C~~--------------------------g~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          557 TEGCLNPRRVECSGRGRCRC--------------------------NVCECHSGYQLPLCQE  592 (687)
T ss_dssp             SCTTBCTTCSBTSSSCCBCS--------------------------SCBCCSTTCCTTTTCC
T ss_pred             CCCCCCCCCCCCCCCCcCCC--------------------------CEEECCCCCcCCCCCC
Confidence            4567654   8999999963                          3699999999999996

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=91.72  E-value=0.049  Score=39.54  Aligned_cols=15  Identities=7%  Similarity=-0.232  Sum_probs=12.8

Q ss_pred             CcceeeCCCCCCCCCcc
Q psy2064         197 STFACVHPDKFYDGLDS  213 (221)
Q Consensus       197 ~~y~C~CP~Gf~G~~~~  213 (221)
                      .+|.|+||+||+  +|+
T Consensus        30 ~~y~C~C~~G~~--~C~   44 (91)
T 1tpg_A           30 RVEYCWCNSGRA--QCH   44 (91)
T ss_dssp             CEEEEECSSSCC--BCC
T ss_pred             CCcEeECCCCCc--ccc
Confidence            379999999998  775

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=91.26  E-value=0.11  Score=52.19  Aligned_cols=39  Identities=18%  Similarity=0.191  Sum_probs=32.1

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..++|.-+||+|+++|+..                      .....|.|++||.|+.|...
T Consensus       496 e~~~c~C~PC~ngg~~~l~----------------------g~~C~C~C~~g~~G~~Ce~~  534 (913)
T 3t5o_A          496 KFDPCQCAPCPNNGRPTLS----------------------GTECLCVCQSGTYGENCEKQ  534 (913)
T ss_dssp             TTCGGGSCCBTTTBEEEEE----------------------TTEEEEECCTTBCSTTSCCB
T ss_pred             ccccccCCCCCCCCEeecC----------------------CCceEEEccCCccccCccCc
Confidence            3578877899999999853                      34678999999999999864

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=91.25  E-value=0.038  Score=51.82  Aligned_cols=36  Identities=8%  Similarity=-0.065  Sum_probs=0.0

Q ss_pred             CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      .|...||.|+|.|...-.                    ..++.|+|++||+|++|+
T Consensus       489 ~C~~C~C~~~gs~~~~C~--------------------~~tG~C~C~~G~~G~~Ce  524 (525)
T 4aqs_A          489 GCRPCDCDLGGALNNSCS--------------------EDSGQCSCLPHMIGRQCN  524 (525)
T ss_dssp             --------------------------------------------------------
T ss_pred             CCcCCCCCCCCccCCccC--------------------CCCCeeECCCCCcCCCCC
Confidence            456667788877755311                    124589999999999985

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=90.98  E-value=0.083  Score=34.89  Aligned_cols=13  Identities=8%  Similarity=0.319  Sum_probs=11.4

Q ss_pred             CCcceeeCCCCCC
Q psy2064         196 VSTFACVHPDKFY  208 (221)
Q Consensus       196 ~~~y~C~CP~Gf~  208 (221)
                      ..+|.|.||+||.
T Consensus        19 ~Gsy~C~C~~Gy~   31 (55)
T 2jkh_L           19 QNSVVCSCARGYT   31 (55)
T ss_dssp             TTEEEEECCTTEE
T ss_pred             CCCeEEeCCCCCE
Confidence            4689999999996

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=90.69  E-value=0.14  Score=44.06  Aligned_cols=12  Identities=33%  Similarity=0.866  Sum_probs=10.5

Q ss_pred             CcceeeCCCCCC
Q psy2064         197 STFACVHPDKFY  208 (221)
Q Consensus       197 ~~y~C~CP~Gf~  208 (221)
                      .+|+|.||.||.
T Consensus       295 ~~~~C~C~~g~~  306 (316)
T 1ijq_A          295 PKFTCACPDGML  306 (316)
T ss_dssp             CSEEEECCTTCE
T ss_pred             CCeEeeCCCCCE
Confidence            479999999985

>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A

Probab=90.23  E-value=1.4  Score=32.70  Aligned_cols=68  Identities=12%  Similarity=0.099  Sum_probs=55.0

Q ss_pred             HHHHHHHHhhCCCCCCcEEEEEeeecCCCCCCeeEEEEEEEcCCCCcCChHHHHHHHHHhHHHHHhhhhhhHHHhhhhhh
Q psy2064          24 NFFMDGLAAIIPCPRENIYLFSIQDDTDVTSRILNVSFSARASDGTFYPPQFLQERVYLNRGILARLATVQERVYLNRGI  103 (221)
Q Consensus        24 ~~f~~~La~~l~~~~~~V~IfSvq~~~~~~~~~lDV~fav~~s~~~y~~p~~l~~~l~~~r~~L~~~~~~~~~~~~~~~~  103 (221)
                      .++++.||++|+++.....=++|...        .|.|=|+..+ .=+....+...+..+|.+|                
T Consensus        20 ~~l~~~la~ll~l~~~~Ft~i~V~g~--------aVTFrV~~N~-~n~taadVa~~a~~~k~~L----------------   74 (91)
T 2qt7_A           20 VKLLEILAEHVHMSSGSFINISVVGP--------ALTFRIRHNE-QNLSLADVTQQAGLVKSEL----------------   74 (91)
T ss_dssp             HHHHHHHHHHHTSCGGGEEEEEEETT--------EEEEEECCCT-TCCCHHHHHHHHHHTHHHH----------------
T ss_pred             HHHHHHHHHHhcCCccceeeeEeecc--------eEEEEeccCc-ccCCHHHHHHHHHHhHHHH----------------
Confidence            46889999999999888888888832        4778885554 4678888888888999999                


Q ss_pred             hhhhhcceeeeeec
Q psy2064         104 LARLATVQSATLSI  117 (221)
Q Consensus       104 ~e~~lg~~i~~v~~  117 (221)
                       |+.+|+.|.+-++
T Consensus        75 -e~~~G~~Iv~aGV   87 (91)
T 2qt7_A           75 -EAQTGLQILQTGV   87 (91)
T ss_dssp             -HHHHTSCEEEEEE
T ss_pred             -HHhhCeEEEeccc
Confidence             8999999977654

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=89.25  E-value=0.19  Score=39.84  Aligned_cols=31  Identities=23%  Similarity=0.507  Sum_probs=23.4

Q ss_pred             CCCCCCCCC-----CCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC
Q psy2064         155 DDNLCVQEP-----CLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD  209 (221)
Q Consensus       155 ~~~~C~~~P-----C~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G  209 (221)
                      ..+.|...+     |.+  .|+..                      ..+|.|.|++||+.
T Consensus       123 di~eC~~~~~~~~~C~~--~C~n~----------------------~g~~~C~C~~Gy~l  158 (170)
T 1szb_A          123 DIDECQVAPGEAPTCDH--HCHNH----------------------LGGFYCSCRAGYVL  158 (170)
T ss_dssp             ECCTTCCCTTSCCSSSS--EEEEE----------------------TTEEEEECCTTEEE
T ss_pred             ccCcccCCCCCCCccCC--ccccC----------------------CCCEEEeCCCCcEE
Confidence            446787554     877  69875                      45899999999983

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=89.00  E-value=0.062  Score=42.40  Aligned_cols=9  Identities=11%  Similarity=0.128  Sum_probs=3.0

Q ss_pred             CCCcEEccc
Q psy2064         165 LNYEQCVTV  173 (221)
Q Consensus       165 ~ngg~Cv~~  173 (221)
                      .++++|+..
T Consensus        59 ~~~~~C~~~   67 (162)
T 1uzk_A           59 NGDTACSNE   67 (162)
T ss_dssp             -----CEEE
T ss_pred             CCCCcccCC
Confidence            468889875

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=87.70  E-value=0.16  Score=42.88  Aligned_cols=16  Identities=13%  Similarity=0.032  Sum_probs=14.5

Q ss_pred             eeeCCCCCCCCCcccc
Q psy2064         200 ACVHPDKFYDGLDSIL  215 (221)
Q Consensus       200 ~C~CP~Gf~G~~~~~~  215 (221)
                      .|.|++||+|+.|+..
T Consensus       200 ~C~C~~G~~G~~C~~~  215 (217)
T 2p28_B          200 KCRCHPGFEGSACQHH  215 (217)
T ss_dssp             EEEECTTEESTTSCEE
T ss_pred             eeECCCCCccCCcCCC
Confidence            7999999999999864

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=84.97  E-value=0.65  Score=45.98  Aligned_cols=33  Identities=21%  Similarity=0.435  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG  210 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~  210 (221)
                      +.+.|. +|++....|+..                      ..+|.|.|++||.+.
T Consensus       351 dideC~-~~~~C~~~C~n~----------------------~gsy~C~C~~Gy~l~  383 (791)
T 3m0c_C          351 DIDECQ-DPDTCSQLCVNL----------------------EGGYKCQCEEGFQLD  383 (791)
T ss_dssp             CCCCCS-SSSSCTTTCCBC----------------------SSCBCCCCCSSEECC
T ss_pred             cCcccC-CCCCCCCeeecC----------------------CCCceeecCCCCEeC
Confidence            457776 444556689875                      468999999999763

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=84.83  E-value=0.33  Score=40.92  Aligned_cols=28  Identities=18%  Similarity=0.342  Sum_probs=24.0

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCC------CCCCCccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDK------FYDGLDSI  214 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~G------f~G~~~~~  214 (221)
                      ..||.++|+|+.                          ..|+|++|      |+|+.|+.
T Consensus       142 ~~~Csg~G~C~~--------------------------g~C~C~~gw~~~~~~~G~~Ce~  175 (217)
T 2p28_B          142 SIICSGLGDCVC--------------------------GQCLCHTSDVPGKLIYGQYCEC  175 (217)
T ss_dssp             SCBGGGTEEEET--------------------------TEEEECCCCSTTCCEESTTSCE
T ss_pred             CCCCCCCCEEeC--------------------------CceECCCCCCCcccEECCCccc
Confidence            578999999974                          26999999      79999984

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=82.24  E-value=0.66  Score=45.92  Aligned_cols=34  Identities=24%  Similarity=0.553  Sum_probs=25.0

Q ss_pred             CCCCCCCCCCc-----EEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC---CCCcc
Q psy2064         158 LCVQEPCLNYE-----QCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY---DGLDS  213 (221)
Q Consensus       158 ~C~~~PC~ngg-----~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~---G~~~~  213 (221)
                      .|..++|.++.     .|+..                      ..+|.|.||+||.   |..|.
T Consensus       309 ~C~~~~C~~~~~~C~~~C~~~----------------------~~~y~C~C~~Gy~l~~g~~C~  350 (791)
T 3m0c_C          309 ECGTNECLDNNGGCSHVCNDL----------------------KIGYECLCPDGFQLVAQRRCE  350 (791)
T ss_dssp             TBSCCSTTTGGGGCSSEEEEC----------------------SBSEEEECCTTCEEETTTEEE
T ss_pred             ccccccccccccCccccccCC----------------------CCCcccCCCCCCccCCCCccc
Confidence            47777777654     67654                      3589999999995   77665

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=81.92  E-value=0.51  Score=41.25  Aligned_cols=11  Identities=27%  Similarity=0.854  Sum_probs=10.4

Q ss_pred             cceeeCCCCCC
Q psy2064         198 TFACVHPDKFY  208 (221)
Q Consensus       198 ~y~C~CP~Gf~  208 (221)
                      +|+|.||.||.
T Consensus       324 ~~~C~C~~g~~  334 (349)
T 3v64_C          324 NYTCACPTGFR  334 (349)
T ss_dssp             SCEEECCTTEE
T ss_pred             CCeeECCCCCc
Confidence            89999999997

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=81.83  E-value=0.97  Score=43.67  Aligned_cols=33  Identities=21%  Similarity=0.512  Sum_probs=24.1

Q ss_pred             CCCCCC-CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         155 DDNLCV-QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       155 ~~~~C~-~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      ..+.|. ..||.  .+|+.+                      ..+|.|.|++||++..
T Consensus       333 dideC~~~~~C~--~~C~n~----------------------~g~y~C~C~~G~~~~~  366 (699)
T 1n7d_A          333 DIDECQDPDTCS--QLCVNL----------------------EGGYKCQCEEGFQLDP  366 (699)
T ss_dssp             CCCCCSSSSSCT--TTCCBC----------------------SSCBCCCCCSSCBCCS
T ss_pred             CccccCCCCccc--cccccC----------------------CCCeeeeeecccccCC
Confidence            346675 56775  478765                      4689999999998743

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=81.03  E-value=0.48  Score=45.24  Aligned_cols=17  Identities=35%  Similarity=0.680  Sum_probs=15.5

Q ss_pred             CCCCCCCCCCCCcEEcc
Q psy2064         156 DNLCVQEPCLNYEQCVT  172 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~  172 (221)
                      .+.|.++||.|||+|++
T Consensus         2 ~d~C~~~PC~ngG~C~~   18 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVR   18 (553)
T ss_dssp             CCGGGGCCCCTTCEEEE
T ss_pred             CCcCCCCCCCCCCCcCC
Confidence            37899999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	99.23
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	99.21
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	99.19
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	99.16
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	99.08
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	99.08
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.96
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.96
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.95
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.95
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.92
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.76
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	98.73
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	98.62
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	98.62
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	98.49
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	97.93
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	97.9
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	97.86
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	97.24
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.18
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.04
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.85
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.21
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	95.97
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.8
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.77
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.07
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	94.92
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	94.73
d1nt0a3	45	Mannose-binding protein associated serine protease	94.4
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	93.87
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	93.79
d1szba2	45	Mannose-binding protein associated serine protease	93.65
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	93.23
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	81.85

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.3e-12  Score=81.11  Aligned_cols=38  Identities=26%  Similarity=0.558  Sum_probs=34.6

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      +.|.++||.|+|+|++.                      ..+|+|+||+||+|++|+++|
T Consensus         2 d~C~~~PC~n~g~C~~~----------------------~~~y~C~C~~G~~G~~Ce~dT   39 (39)
T d2vj3a2           2 NECVSNPCQNDATCLDQ----------------------IGEFQCICMPGYEGVHCEVNT   39 (39)
T ss_dssp             CTTTTCCCCSSCEEEEC----------------------SSCEEEECCTTEESSSSCEEC
T ss_pred             cCCcCCCCCCCCEEECC----------------------CCCEEEeCCCCCccCcCeeCc
Confidence            78999999999999975                      468999999999999999875

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.9e-12  Score=80.37  Aligned_cols=40  Identities=30%  Similarity=0.532  Sum_probs=34.4

Q ss_pred             CCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccccc
Q psy2064         159 CVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTS  218 (221)
Q Consensus       159 C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~~  218 (221)
                      |.++||+|||+|++..                    ...+|.|+||+||+|++|.++.++
T Consensus         1 C~~nPC~ngG~C~~~~--------------------~~~~y~C~C~~g~~G~~Ce~~~~~   40 (41)
T d1tpga1           1 CSEPRCFNGGTCQQAL--------------------YFSDFVCQCPEGFAGKSCEIDTRA   40 (41)
T ss_dssp             CSSCCSCTTCEEEEES--------------------SSSCEEEECCTTCBSSSCCBCSSC
T ss_pred             CcCCCCCCCCEEecCC--------------------CCCCeEECCCCCCCCCCcCcCcCC
Confidence            7899999999999863                    145899999999999999988654

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.6e-12  Score=78.96  Aligned_cols=38  Identities=26%  Similarity=0.576  Sum_probs=34.3

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      +.++|.++||.|||+|++.                      ..+|+|.||+||+|++|+|
T Consensus         2 d~d~C~~~PC~ngg~C~~~----------------------~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDD----------------------INSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEE----------------------TTEEEEECCTTCCSTTSCC
T ss_pred             ccccCCCCCCCCCcEEEcC----------------------CCCEEEECCCCCCCCCCCC
Confidence            4589999999999999975                      4689999999999999975

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=6.6e-12  Score=78.99  Aligned_cols=38  Identities=21%  Similarity=0.519  Sum_probs=33.9

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      +.|.++||+|+|+|++.                      ..+|.|.||+||+|++|.|.+
T Consensus         1 D~C~~~PC~ngg~C~~~----------------------~~~y~C~C~~G~~G~~Cei~~   38 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDG----------------------LGEYTCTCLEGFEGKNCELFT   38 (39)
T ss_dssp             CTTTTCCCCSSCEECCC----------------------SSSCCEECCTTEETTTTCEES
T ss_pred             CcCCCCCCCCCcEEECC----------------------CCCEEEECCCCCCcCcCeEcc
Confidence            47999999999999985                      458999999999999999764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.6e-11  Score=74.44  Aligned_cols=35  Identities=29%  Similarity=0.732  Sum_probs=31.4

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      +.|.++||.|+|+|++.                      ..+|+|.||+||+|++|+
T Consensus         1 d~C~~~PC~ngg~C~~~----------------------~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDK----------------------INEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEEC----------------------SSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECC----------------------CCCeEEECCCCCCCCCcC
Confidence            57999999999999975                      458999999999999985

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.08  E-value=1.7e-11  Score=76.23  Aligned_cols=36  Identities=19%  Similarity=0.462  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcc
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDS  213 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~  213 (221)
                      .+.|.++||+|||+|++.                      ..+|.|.||+||+|++|+
T Consensus         2 ~d~C~~~PC~ngg~C~~~----------------------~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQ----------------------LQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEE----------------------TTEEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCCEEECC----------------------CCCeEEECCCCCcCCCCC
Confidence            478999999999999985                      458999999999999984

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=7.8e-11  Score=74.33  Aligned_cols=37  Identities=16%  Similarity=0.470  Sum_probs=33.0

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      +.|.++||+|+|+|++.                      ..+|.|.||+||+|++|...
T Consensus         2 ~~C~~~pC~ngg~C~~~----------------------~~~y~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLET----------------------IGNYTCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCCTTGGGGSEEEEEC----------------------SSSEEEEECTTEESTTSCEE
T ss_pred             CcccCCcCCCCcEEECC----------------------CCCeEEeCCCCccCCCCCCC
Confidence            57999999999999975                      45899999999999999853

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.96  E-value=1.1e-10  Score=74.37  Aligned_cols=39  Identities=21%  Similarity=0.385  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCC-CCCCCCcccc
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPD-KFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~-Gf~G~~~~~~  215 (221)
                      .++|..+||+|||+|++.                     ...+|.|.||. ||+|++|+++
T Consensus         2 id~C~~nPC~ngG~C~~~---------------------~~~~y~C~C~~~G~~G~~Ce~p   41 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRF---------------------GLDRYQCDCTRTGYSGPNCTIP   41 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEE---------------------TTTEEEEECTTSSEETTTTCEE
T ss_pred             CccCcCCCCCCCCEeeeC---------------------CCCCEEEECCCCCcCCcCcCcC
Confidence            489999999999999864                     14589999986 9999999864

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.4e-10  Score=73.49  Aligned_cols=38  Identities=24%  Similarity=0.551  Sum_probs=32.5

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCC-CCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHP-DKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP-~Gf~G~~~~~~  215 (221)
                      ++|.++||+|||+|+...                     ..+|+|.|| +||+|++|+++
T Consensus         2 d~C~~~PC~ngG~C~~~~---------------------~~~y~C~C~~~gy~G~~Ce~p   40 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTG---------------------FDQYKCDCTRTGFYGENCTTP   40 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEE---------------------TTEEEEECTTSSEETTTTCEE
T ss_pred             CcCcCCCCCCCCEEEECC---------------------CCCEEEeCcCCCcCCcCcCcC
Confidence            689999999999998641                     358999998 59999999864

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=8e-11  Score=73.88  Aligned_cols=36  Identities=17%  Similarity=0.411  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      ++|.++||.|+|+|++.                      ..+|.|.||+||+|++|+.
T Consensus         2 ~~C~~~pC~ngg~C~~~----------------------~~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2           2 AACTNTSCSGHGECVET----------------------INNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             CCCCTTGGGGSEEEEEE----------------------TTEEEEEECTTEESTTSCE
T ss_pred             CcccCCcCCCCcEEECC----------------------CCCEEEeCCCCCcCcCcCc
Confidence            58999999999999975                      4689999999999999973

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3.2e-10  Score=72.00  Aligned_cols=38  Identities=18%  Similarity=0.459  Sum_probs=32.3

Q ss_pred             CCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         156 DNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+.|.  .+||.|+++|+..                      ..+|.|.||+||+|++|.++
T Consensus         3 ideC~~~~~pC~n~g~C~n~----------------------~g~y~C~C~~G~~G~~Ce~d   42 (42)
T d2vj3a1           3 VDECSLGANPCEHAGKCINT----------------------LGSFECQCLQGYTGPRCEID   42 (42)
T ss_dssp             CCTTTSSSCSSSTTCEEEEC----------------------SSSEEEECCTTEESTTSCEE
T ss_pred             CccccCCCCCCCCCcEeECC----------------------CCCEEeECCCCCcCCCCcCc
Confidence            35665  7899999999986                      45899999999999999863

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.6e-09  Score=70.83  Aligned_cols=38  Identities=13%  Similarity=0.308  Sum_probs=33.1

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      ..++|.++||.| |+|++.                      ..+|.|.||+||+|++|...
T Consensus         7 ~~~~C~~~PC~n-G~C~~~----------------------~~~y~C~C~~G~~G~~Ce~~   44 (48)
T d1autl1           7 LEHPCASLCCGH-GTCIDG----------------------IGSFSCDCRSGWEGRFCQRE   44 (48)
T ss_dssp             SCCSSSSTTTTS-EEECCC----------------------SSCCCEEECTTEESTTSCEE
T ss_pred             CCCcccCCCCCC-CEEECC----------------------CCCCeEeCCCCCcCCCcccc
Confidence            468999999999 699975                      45899999999999999854

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=4.1e-09  Score=70.02  Aligned_cols=39  Identities=13%  Similarity=0.221  Sum_probs=32.4

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+|..+||.|||+|+...                    ...+|+|.||+||+|++|+..
T Consensus         7 ~~c~~~~C~NgG~C~~~~--------------------~~~~~~C~C~~gy~G~~Ce~~   45 (53)
T d3egfa_           7 PSSYDGYCLNGGVCMHIE--------------------SLDSYTCNCVIGYSGDRCQTR   45 (53)
T ss_dssp             CTTSSCCSCSSCEEEEES--------------------SSSCEEEECCTTCCSSSSCCC
T ss_pred             CCCCCCCCCCCcEeeccC--------------------CCCCeEeECCCCCcCCCCccC
Confidence            578899999999998531                    245899999999999999853

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=4.1e-09  Score=68.66  Aligned_cols=39  Identities=15%  Similarity=0.252  Sum_probs=32.2

Q ss_pred             CCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         157 NLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       157 ~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+|..+||.|||+|....                    ...+|.|+||.||+|++|...
T Consensus         5 ~~c~~~~C~ngG~C~~~~--------------------~~~~~~C~C~~gy~G~~Ce~~   43 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIE--------------------ALDKYACNCVVGYIGERCQYR   43 (48)
T ss_dssp             CSTTCCEECTTCEEEEET--------------------TTTEEEEEECTTEESTTSCEE
T ss_pred             CCCCCCCCCCCcEEeeeC--------------------CCCCeEEeCCCCcccCCCCcC
Confidence            478899999999998631                    135799999999999999853

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=3.4e-09  Score=72.58  Aligned_cols=43  Identities=16%  Similarity=0.158  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      -+.|.++||+|||+|.....                 +....+|.|+||+||+|++|...
T Consensus         6 c~ec~~~~C~NgG~C~~~~~-----------------~~~~~~y~C~C~~gy~G~~Ce~~   48 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKD-----------------LSNPSRYLCKCQPGFTGARCTEN   48 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEES-----------------SSSSCCEEEECCTTEESTTSCEE
T ss_pred             CCCCcCCcCCCCCEEeeccc-----------------ccCCCCEEeECCCCCCCCCcCCC
Confidence            36788999999999975311                 01246899999999999999843

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.7e-08  Score=61.17  Aligned_cols=37  Identities=32%  Similarity=0.441  Sum_probs=30.4

Q ss_pred             CCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccccc
Q psy2064         163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILTTS  218 (221)
Q Consensus       163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~~~  218 (221)
                      -|+|||+|++.--|+.                   --+|.||.||.|.+|+|+++.
T Consensus         3 ~ClNGG~Cvsyk~FS~-------------------I~rC~CPk~f~G~HCEiDt~k   39 (40)
T d2i9aa1           3 DCLNGGTCVSNKYFSN-------------------IHWCNCPKKFGGQHCEIDKSK   39 (40)
T ss_dssp             CCCTTCEEEECSSSTT-------------------CEEEECCTTEESTTSCEESSC
T ss_pred             ccccCCEEEEEehhcC-------------------CEEecCCcccCceeEEecccC
Confidence            5999999998644322                   358999999999999999864

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.7e-06  Score=56.49  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=28.0

Q ss_pred             CCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         160 VQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       160 ~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      -.++|.||+.|...                     ....+.|.||.||+|+||..
T Consensus        12 ~~~yC~nGgcc~~~---------------------~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          12 YKHYCIKGRCRFVV---------------------AEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             GTTSCTTCCEEEET---------------------TTTEEEECCCTTEETTTTCE
T ss_pred             cCCCccCCeEEEeC---------------------CCCCcEeECCCCCeeCCCcc
Confidence            36899999999643                     24578999999999999984

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=3.3e-06  Score=54.17  Aligned_cols=37  Identities=16%  Similarity=0.219  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCcccc
Q psy2064         158 LCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSIL  215 (221)
Q Consensus       158 ~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~  215 (221)
                      .+..++|.| |.|.-..                    ...++.|.||+||+|+||...
T Consensus         8 ~~~~~yC~n-G~C~~~~--------------------~~~~~~C~C~~gY~G~RCe~~   44 (46)
T d1k36a_           8 SDMNGYCLH-GQCIYLV--------------------DMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             TTCCSSCSS-EEEEEET--------------------TTTEEEEEECTTCSSTTSCCC
T ss_pred             CcCCCcCcC-CEEEEeC--------------------CCCccEeECCCCceecCceee
Confidence            345689999 5575321                    245799999999999999843

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2e-06  Score=55.90  Aligned_cols=33  Identities=15%  Similarity=0.126  Sum_probs=26.9

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSI  214 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~  214 (221)
                      .+.|.|||.|...                     ....+.|.||+||+|+||+.
T Consensus        12 ~~yClnGgcc~~~---------------------~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          12 TQFCFHGTCRFLV---------------------QEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             SCSSTTEEEEEET---------------------TTTEEEEEECTTEESTTSCE
T ss_pred             CCEeeCCeEEecC---------------------CCCCcEeECCCCCEecCCcc
Confidence            6789999988532                     13478999999999999984

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=6.5e-05  Score=46.81  Aligned_cols=35  Identities=14%  Similarity=0.316  Sum_probs=26.6

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCCccccc
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGLDSILT  216 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~~~~~~  216 (221)
                      ++=|.| |+|.-..                    ....+.|.|+.||+|+||...|
T Consensus         7 ~~yCih-G~C~~i~--------------------~l~~~~C~C~~gY~G~RCq~~t   41 (41)
T d1xdtr_           7 KDFCIH-GECKYVK--------------------ELRAPSCICHPGYHGERCHGLS   41 (41)
T ss_dssp             TTCCSS-EEECCBG--------------------GGTBCCEEECTTEESTTCCEEC
T ss_pred             CCEeEC-cEEeecC--------------------cCCCceeECCCCCeecCcccCC
Confidence            356999 9996421                    1346789999999999998654

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=7.5e-05  Score=46.76  Aligned_cols=33  Identities=18%  Similarity=0.402  Sum_probs=27.3

Q ss_pred             CCCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCC
Q psy2064         155 DDNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYD  209 (221)
Q Consensus       155 ~~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G  209 (221)
                      +.+.|...+|...++|+.+                      ..+|.|.||+||++
T Consensus         4 DidEC~~~~~~~~~~C~Nt----------------------~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           4 DMDECKEPDVCKHGQCINT----------------------DGSYRCECPFGYIL   36 (43)
T ss_dssp             CCCSSSSTTSCSSSCCCCC----------------------SSCCCCCCCTTEEE
T ss_pred             ceeccCCcCCCCCCEeECC----------------------CCCeEeECCCCccc
Confidence            5678877777788899986                      46899999999974

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00024  Score=46.00  Aligned_cols=29  Identities=10%  Similarity=0.085  Sum_probs=22.6

Q ss_pred             CCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064         160 VQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG  210 (221)
Q Consensus       160 ~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~  210 (221)
                      ...+|.....|+.+                      ..+|.|.||+||+..
T Consensus        16 ~~~~~~c~~~C~Nt----------------------~GsY~C~C~~Gy~l~   44 (53)
T d1apqa_          16 EDPQPQCQHLCHNY----------------------VGGYFCSCRPGYELQ   44 (53)
T ss_dssp             CSSSCTTSSEEEEE----------------------TTEEEEECSTTCEEC
T ss_pred             cCCCCCccCEeEcC----------------------CCCeEeECCCCCeEC
Confidence            44556677789987                      469999999999743

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0002  Score=45.08  Aligned_cols=33  Identities=24%  Similarity=0.571  Sum_probs=25.1

Q ss_pred             CCCCC--CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         156 DNLCV--QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       156 ~~~C~--~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      .+.|.  ..+|.+ ++|+.+                      ..+|.|.||+||.|..
T Consensus         3 idEC~~~~~~C~~-~~C~Nt----------------------~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           3 IDECRISPDLCGR-GQCVNT----------------------PGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCTTTTCSSTTTT-SCEEEE----------------------TTEEEECCCSSEEECT
T ss_pred             ccccCCCCCCCCC-CEeEcC----------------------CCCeEEeCCCCCccCC
Confidence            45664  445765 689987                      5799999999998864

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0013  Score=40.67  Aligned_cols=33  Identities=21%  Similarity=0.408  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCC
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDG  210 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~  210 (221)
                      .+.|...+..-.++|+.+                      ..+|.|.||+||...
T Consensus         3 idEC~~~~~~c~~~C~Nt----------------------~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           3 VNECLDPTTCISGNCVNT----------------------PGSYICDCPPDFELN   35 (43)
T ss_dssp             CCGGGSTTSSBTSEEEEE----------------------TTEEEEECCTTCEEC
T ss_pred             ccccCCCCcCcCCEeECC----------------------CCCEEEecCCCCEEC
Confidence            456643333345799986                      469999999999543

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.00081  Score=41.33  Aligned_cols=29  Identities=14%  Similarity=0.358  Sum_probs=23.8

Q ss_pred             CCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCCCCC
Q psy2064         161 QEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFYDGL  211 (221)
Q Consensus       161 ~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~G~~  211 (221)
                      .++|....+|+.+                      ..+|.|+|++||+|.-
T Consensus         6 ~~~C~~~A~C~Nt----------------------~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2           6 RHQCSVHAECRDY----------------------ATGFCCRCVANYTGNG   34 (40)
T ss_dssp             GGGSCTTEEEEEC----------------------SSCEEEEECTTEEECS
T ss_pred             CCCCCCCCEeecC----------------------CCCeEeECCCCCcCCC
Confidence            3568888999976                      4689999999999863

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0027  Score=39.11  Aligned_cols=15  Identities=13%  Similarity=0.295  Sum_probs=12.8

Q ss_pred             CCcceeeCCCCCCCC
Q psy2064         196 VSTFACVHPDKFYDG  210 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~  210 (221)
                      ..+|.|.||+||...
T Consensus        21 ~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2          21 EGSYRCECPPGHQLS   35 (42)
T ss_dssp             TTEEEEESCTTSCCC
T ss_pred             CCCeEEeCCCCCeEC
Confidence            569999999999843

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.002  Score=39.92  Aligned_cols=16  Identities=25%  Similarity=0.625  Sum_probs=13.3

Q ss_pred             CCcceeeCCCCCCCCC
Q psy2064         196 VSTFACVHPDKFYDGL  211 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~~  211 (221)
                      ..+|.|.||+||....
T Consensus        22 ~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2          22 FGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             SSCEEEECCTTCCBCT
T ss_pred             CCCeEeECCCCCeECc
Confidence            4699999999997554

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.006  Score=36.55  Aligned_cols=28  Identities=36%  Similarity=0.776  Sum_probs=22.3

Q ss_pred             CC-CCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC
Q psy2064         158 LC-VQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY  208 (221)
Q Consensus       158 ~C-~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~  208 (221)
                      .| ..+||-|| +|...                      ..+|.|.|-+||.
T Consensus         3 ECsignpCGnG-TCtNv----------------------iGgFec~C~~GFe   31 (39)
T d1emoa2           3 ECSVGNPCGNG-TCKNV----------------------IGGFECTCEEGFE   31 (39)
T ss_dssp             GGGTTCSSSSS-CEEEC----------------------SSSEEECCSSSSC
T ss_pred             ccccCCccCCc-eeeec----------------------ccceEEeecCCcC
Confidence            45 47899887 58765                      5799999999995

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0061  Score=37.21  Aligned_cols=14  Identities=14%  Similarity=0.316  Sum_probs=12.0

Q ss_pred             CCcceeeCCCCCCC
Q psy2064         196 VSTFACVHPDKFYD  209 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G  209 (221)
                      ..+|.|.||+||.-
T Consensus        18 ~Gsy~C~C~~Gy~L   31 (41)
T d1i0ua2          18 EGGYKCQCEEGFQL   31 (41)
T ss_dssp             SSCCEECCCTTEEE
T ss_pred             CCCEEeECCCCCeE
Confidence            46899999999973

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.0086  Score=36.59  Aligned_cols=15  Identities=20%  Similarity=0.248  Sum_probs=13.1

Q ss_pred             CCcceeeCCCCCCCC
Q psy2064         196 VSTFACVHPDKFYDG  210 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~  210 (221)
                      ..+|+|.||+||+..
T Consensus        19 ~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3          19 PGTFECICGPDSALA   33 (40)
T ss_dssp             SSSEEEEECSSSSCE
T ss_pred             CCCeEeECCCCCeeC
Confidence            569999999999874

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.40  E-value=0.011  Score=36.73  Aligned_cols=13  Identities=8%  Similarity=0.327  Sum_probs=11.4

Q ss_pred             CCcceeeCCCCCC
Q psy2064         196 VSTFACVHPDKFY  208 (221)
Q Consensus       196 ~~~y~C~CP~Gf~  208 (221)
                      ..+|.|.||+||.
T Consensus        22 ~gsy~C~C~~Gy~   34 (45)
T d1nt0a3          22 LGGYYCSCRVGYI   34 (45)
T ss_dssp             TTEEEEECCTTEE
T ss_pred             CCCEEEeCCCCCE
Confidence            4699999999994

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.015  Score=35.26  Aligned_cols=13  Identities=31%  Similarity=0.743  Sum_probs=11.3

Q ss_pred             CCcceeeCCCCCC
Q psy2064         196 VSTFACVHPDKFY  208 (221)
Q Consensus       196 ~~~y~C~CP~Gf~  208 (221)
                      ..+|.|.||+||.
T Consensus        20 ~g~~~C~C~~Gy~   32 (40)
T d3bpse1          20 KIGYECLCPDGFQ   32 (40)
T ss_dssp             SSSEEEECCTTCC
T ss_pred             CCCEEEECCCCCE
Confidence            3589999999995

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.024  Score=34.73  Aligned_cols=16  Identities=13%  Similarity=0.486  Sum_probs=12.9

Q ss_pred             CCcceeeCCCCCCCCC
Q psy2064         196 VSTFACVHPDKFYDGL  211 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G~~  211 (221)
                      ..+|.|.||+||.-..
T Consensus        19 ~Gsy~C~C~~Gy~L~~   34 (42)
T d1nzia2          19 IGGYFCSCPPEYFLHD   34 (42)
T ss_dssp             TTEEEEECCTTCEECT
T ss_pred             CCCEEEeCCCCCEECC
Confidence            4699999999997433

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.02  Score=35.38  Aligned_cols=14  Identities=14%  Similarity=0.306  Sum_probs=12.0

Q ss_pred             CCcceeeCCCCCCC
Q psy2064         196 VSTFACVHPDKFYD  209 (221)
Q Consensus       196 ~~~y~C~CP~Gf~G  209 (221)
                      ..+|.|.||+||.-
T Consensus        22 ~Gsy~C~C~~Gy~l   35 (45)
T d1szba2          22 LGGFYCSCRAGYVL   35 (45)
T ss_dssp             TTEEEEECCTTEEE
T ss_pred             CCCeEEECCCCCeE
Confidence            46999999999963

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.23  E-value=0.017  Score=37.22  Aligned_cols=32  Identities=19%  Similarity=0.337  Sum_probs=24.0

Q ss_pred             CCCCCcEEccceeccCCCccccccceeeeccCCCCccee-eCCCCCCCCCccc
Q psy2064         163 PCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFAC-VHPDKFYDGLDSI  214 (221)
Q Consensus       163 PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C-~CP~Gf~G~~~~~  214 (221)
                      ||++++.|...-                    ......| .|+.||+|++|+.
T Consensus         2 pC~~~~~c~~~~--------------------~~~~~vC~~C~~~~~G~~Ce~   34 (55)
T d1kloa1           2 PCPGGSSCAIVP--------------------KTKEVVCTHCPTGTAGKRCEL   34 (55)
T ss_dssp             CSCTTCCEEECS--------------------SSCCEEECSCCTTEESTTSCE
T ss_pred             cCcCCCccceeC--------------------CCCCEEcCCCCCCCccCcccc
Confidence            788888886531                    1345678 6999999999984

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.85  E-value=0.42  Score=28.98  Aligned_cols=30  Identities=23%  Similarity=0.573  Sum_probs=22.7

Q ss_pred             CCCCCCCCCCCCcEEccceeccCCCccccccceeeeccCCCCcceeeCCCCCC
Q psy2064         156 DNLCVQEPCLNYEQCVTVLKFGNASGFVASDSVLFRPIYPVSTFACVHPDKFY  208 (221)
Q Consensus       156 ~~~C~~~PC~ngg~Cv~~~~~~~~~~~~~s~~~~f~~~~~~~~y~C~CP~Gf~  208 (221)
                      .++|-..+|.  .+|-+..                     ..+|+|.|..||.
T Consensus         4 vDPCf~~~CE--~qCqP~~---------------------~~~Y~CiCaeGFa   33 (43)
T d1dx5i1           4 VDPCFRANCE--YQCQPLD---------------------QTSYLCVCAEGFA   33 (43)
T ss_dssp             CCGGGGCCCS--SEEEECS---------------------SSCEEEECCTTEE
T ss_pred             cccccCCCcc--eeeeeCC---------------------CCcceEEeccccc
Confidence            4678888886  4677642                     3589999999994