Diaphorina citri psyllid: psy2067


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
cHHHHHHHHHHHHHHHcccccccccccccccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEccccccccccEEEEEEccccccHHHHHHHHcc
***********************************************************************************EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES*************KSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
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MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GrpE protein homolog 1, mitochondrial Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.confidentQ99LP6
GrpE protein homolog, mitochondrial Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of ssc1 to substrate proteins.confidentO43047
Protein GrpE Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.confidentQ6G563

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051082 [MF]unfolded protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0009987 [BP]cellular processprobableGO:0008150
GO:0005759 [CC]mitochondrial matrixprobableGO:0005737, GO:0005575, GO:0043231, GO:0043233, GO:0031974, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0044446, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0005623, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ANI, chain A
Confidence level:very confident
Coverage over the Query: 91-219
View the alignment between query and template
View the model in PyMOL