Psyllid ID: psy2067

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEccccccccccEEEEEEccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccEEEccccEEEEEEEEHHHHHHHHHHHccHHHHHcHHHHHHHHcc
Coil and Loop (DISEMBL)
MEFLKRLSARQQHFIGELksripqtlsaQSNVKFLWSKAenkkeeseskkddsdstasssstestsnvdpKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSlanesvpkeevkdsnphlKSLYEGLLmtdgnlkkhahpveypsvviipdsIAVMERISLEQSLSIFLANFSVEWlqsplakdIFENL
Flexible Loop (DISEMBL)
MEFLKRLSARQQHFIgelksripqtlsaqSNVKFLWSKaenkkeeseskkddsdstasssstestsnvdpkiKEELEDLKKQIEAlneknsdllDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANEsvpkeevkdsnphlKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQsplakdifenl
Low Complexity Region (SEG)
MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWskaenkkeeseskkddsdstasssstestsnVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
Disordered region (IsUnstruct)
*********************************FL***********************************************************************************KLYGIQSFCKDLLDIADTLSL******************SLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAK******
Disordered Region (DISOPRED)
***********************************************************************************EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES*************KSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVM*****EQSLSIFLANFSVEWLQSPLAKDIFENL
Disordered Region (DISEMBL)
MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWSK*******************************PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANE***********PHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
Disordered Region (DISPRO)
*EFLKRLSARQQHFIGELKSRI***********************************************PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEFLKRLSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSIFLANFSVEWLQSPLAKDIFENL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q5RA81	217	GrpE protein homolog 1, m	yes	N/A	0.595	0.617	0.469	3e-26
Q9HAV7	217	GrpE protein homolog 1, m	yes	N/A	0.595	0.617	0.469	3e-26
P97576	217	GrpE protein homolog 1, m	yes	N/A	0.386	0.400	0.632	1e-25
Q3SZC1	217	GrpE protein homolog 1, m	yes	N/A	0.386	0.400	0.609	2e-25
Q99LP6	217	GrpE protein homolog 1, m	yes	N/A	0.386	0.400	0.620	2e-25
P48604	213	GrpE protein homolog, mit	yes	N/A	0.44	0.464	0.528	7e-25
Q18421	237	GrpE protein homolog, mit	yes	N/A	0.417	0.396	0.425	1e-14
B3Q970	207	Protein GrpE OS=Rhodopseu	yes	N/A	0.537	0.584	0.359	2e-13
Q8TAA5	225	GrpE protein homolog 2, m	no	N/A	0.471	0.471	0.344	3e-13
Q5R435	225	GrpE protein homolog 2, m	no	N/A	0.471	0.471	0.344	4e-13

>sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=Pongo abelii GN=GRPEL1 PE=2 SV=1

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 15/149 (10%)

Query: 26  LSAQSNVKFLWS--KAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQI 83
           LS + + + L +  K +N  +  E     S+  A   +TE T  ++ K+K E E LK+ +
Sbjct: 18  LSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL-LEEKVKLE-EQLKETV 75

Query: 84  EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
           E           KYKRALAD EN RQR  K +EE+KLYGIQ+FCKDLL++AD L  A + 
Sbjct: 76  E-----------KYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQC 124

Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           VPKEE+KD NPHLK+LYEGL+MT+  ++K
Sbjct: 125 VPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.
Pongo abelii (taxid: 9601)

>sp|Q9HAV7|GRPE1_HUMAN GrpE protein homolog 1, mitochondrial OS=Homo sapiens GN=GRPEL1 PE=1 SV=2

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 95/149 (63%), Gaps = 15/149 (10%)

Query: 26  LSAQSNVKFLWS--KAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQI 83
           LS + + + L +  K +N  +  E     S+  A   +TE T  ++ K+K E E LK+ +
Sbjct: 18  LSLRPSPRLLCTATKQKNSGQNLEEDMGQSEQKADPPATEKTL-LEEKVKLE-EQLKETV 75

Query: 84  EALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANES 143
           E           KYKRALAD EN RQR  K +EE+KLYGIQ+FCKDLL++AD L  A + 
Sbjct: 76  E-----------KYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQC 124

Query: 144 VPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           VPKEE+KD NPHLK+LYEGL+MT+  ++K
Sbjct: 125 VPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Homo sapiens (taxid: 9606)

>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus GN=Grpel1 PE=1 SV=2

 Score =  116 bits (290), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 70/87 (80%)

Query: 86  LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
           L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKDLL++AD L  A +SVP
Sbjct: 67  LEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVP 126

Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           KEEV ++NPHLKSLYEGL+MT+  ++K
Sbjct: 127 KEEVSNNNPHLKSLYEGLVMTEVQIQK 153

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Rattus norvegicus (taxid: 10116)

>sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=Bos taurus GN=GRPEL1 PE=1 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 69/87 (79%)

Query: 86  LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
           L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKDLL++AD L  A + VP
Sbjct: 67  LEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQCVP 126

Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           +EE++D NPHLKSLYEGL+MT+  ++K
Sbjct: 127 QEEIRDDNPHLKSLYEGLVMTEVQIQK 153

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Bos taurus (taxid: 9913)

>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1 PE=1 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/87 (62%), Positives = 70/87 (80%)

Query: 86  LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
           L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKDLL++AD L  A +SVP
Sbjct: 67  LEEQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKDLLEVADILEKATQSVP 126

Query: 146 KEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           KEE+ ++NPHLKSLYEGL+MT+  ++K
Sbjct: 127 KEEISNNNPHLKSLYEGLVMTEVQIQK 153

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Mus musculus (taxid: 10090)

>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster GN=Roe1 PE=2 SV=2

 Score =  114 bits (284), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 5/104 (4%)

Query: 75  ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
           E+E L K++ A  E+N++L+DKYKR+LAD EN R R NKQ+ ++K++GIQSFCKDLL++A
Sbjct: 54  EVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVA 113

Query: 135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA 174
           DTL  A ++VPK+++   N  LK+LYEGL MT  +L    K+H 
Sbjct: 114 DTLGHATQAVPKDKL-SGNADLKNLYEGLTMTRASLLQVFKRHG 156

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Drosophila melanogaster (taxid: 7227)

>sp|Q18421|GRPE_CAEEL GrpE protein homolog, mitochondrial OS=Caenorhabditis elegans GN=C34C12.8 PE=1 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 64/94 (68%)

Query: 73  KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLD 132
           K   + L K+ + L  ++ D  DKY+R+LA+ EN R+R  KQ +++K++ IQSFCKDLL+
Sbjct: 73  KGAFDVLLKEYDDLQAESLDFKDKYQRSLAETENVRRRGIKQTDDAKVFAIQSFCKDLLE 132

Query: 133 IADTLSLANESVPKEEVKDSNPHLKSLYEGLLMT 166
           ++D L +A +SV  E+++     LK L+EG+ MT
Sbjct: 133 VSDILDIAVKSVKPEDLESGGKALKDLFEGVSMT 166

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Caenorhabditis elegans (taxid: 6239)

>sp|B3Q970|GRPE_RHOPT Protein GrpE OS=Rhodopseudomonas palustris (strain TIE-1) GN=grpE PE=3 SV=1

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 77/128 (60%), Gaps = 7/128 (5%)

Query: 45  ESESKKDDSDSTASSSSTESTSN--VDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALA 102
           E++ +KD++  TA +++    S   + P   EE  +     EAL  + +D  DK  R LA
Sbjct: 3   ETDGQKDNNQDTAQAAADPVVSKPYIMPDDPEEGSN-----EALVREAADARDKMLRTLA 57

Query: 103 DGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEG 162
           + EN R+R  K++ +++ YG+ SF +D+LDIAD L  A ++VP E   ++ P LK+L EG
Sbjct: 58  EMENLRKRTQKEVADARTYGVTSFARDVLDIADNLQRALDAVPAEARANAEPGLKALIEG 117

Query: 163 LLMTDGNL 170
           + +T+ +L
Sbjct: 118 VELTERSL 125

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960)

>sp|Q8TAA5|GRPE2_HUMAN GrpE protein homolog 2, mitochondrial OS=Homo sapiens GN=GRPEL2 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 16/122 (13%)

Query: 86  LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
           L ++  DL  +Y+RA+AD EN R+R  + +E++K++GIQSFCKDL+++AD L    E + 
Sbjct: 69  LEKEVQDLTVRYQRAIADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128

Query: 146 KE-EVKDSNPHLKSLYEGLLMTDGNLK----KHA-----------HPVEYPSVVIIPDSI 189
           +E E +D    L+ ++ GLL+ +  LK    KH             P E+  +  +P  +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188

Query: 190 AV 191
            V
Sbjct: 189 GV 190

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins. Stimulates ATPase activity of mt-HSP70. May also serve to modulate the interconversion of oligomeric (inactive) and monomeric (active) forms of mt-HSP70.

Homo sapiens (taxid: 9606)

>sp|Q5R435|GRPE2_PONAB GrpE protein homolog 2, mitochondrial OS=Pongo abelii GN=GRPEL2 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 16/122 (13%)

Query: 86  LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVP 145
           L ++  DL  +Y+RA+AD EN R+R  + +E++K++GIQSFCKDL+++AD L    E + 
Sbjct: 69  LEKEVQDLTVRYQRAVADCENIRRRTQRCVEDAKIFGIQSFCKDLVEVADILEKTTECIS 128

Query: 146 KE-EVKDSNPHLKSLYEGLLMTDGNLK----KHA-----------HPVEYPSVVIIPDSI 189
           +E E +D    L+ ++ GLL+ +  LK    KH             P E+  +  +P  +
Sbjct: 129 EESEPEDQKLTLEKVFRGLLLLEAKLKSVFAKHGLEKLTPIGDKYDPHEHELICHVPAGV 188

Query: 190 AV 191
            V
Sbjct: 189 GV 190

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins. Stimulates ATPase activity of mt-HSP70. May also serve to modulate the interconversion of oligomeric (inactive) and monomeric (active) forms of mt-HSP70.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
332374942	218	unknown [Dendroctonus ponderosae]	0.52	0.536	0.616	3e-35
91093058	222	PREDICTED: similar to GrpE-like 1, mitoc	0.595	0.603	0.513	3e-32
157106034	226	hypothetical protein AaeL_AAEL004438 [Ae	0.497	0.495	0.577	7e-30
322788377	235	hypothetical protein SINV_00910 [Solenop	0.644	0.617	0.462	2e-29
332021654	233	GrpE protein-like protein 1, mitochondri	0.608	0.587	0.496	3e-29
156536983	231	PREDICTED: grpE protein homolog 1, mitoc	0.511	0.497	0.591	3e-29
350539357	222	putative GrpE-like 1 mitochondrial precu	0.702	0.711	0.451	8e-29
170043539	221	grpE [Culex quinquefasciatus] gi|1678668	0.506	0.515	0.559	9e-29
197127343	222	putative GrpE-like 1 mitochondrial precu	0.702	0.711	0.445	1e-28
307176632	234	GrpE protein-like protein, mitochondrial	0.622	0.598	0.496	2e-28

>gi|332374942|gb|AEE62612.1| unknown [Dendroctonus ponderosae]

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%), Gaps = 8/125 (6%)

Query: 47  ESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGEN 106
           E+KK ++D+  S S+ +  SNV      E+E L KQI  L EKNS+LLDKYKR+LADGEN
Sbjct: 39  ETKKSETDT--SPSANDDKSNV------EIEKLNKQIVELTEKNSELLDKYKRSLADGEN 90

Query: 107 ARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMT 166
            RQR  KQ+ E+K+YGIQ FCKDLLD+AD L  A E+VPK+E+KDSNPHLK LYEGL+MT
Sbjct: 91  LRQRLTKQIGEAKIYGIQGFCKDLLDVADVLGKATETVPKDEIKDSNPHLKGLYEGLIMT 150

Query: 167 DGNLK 171
           +  LK
Sbjct: 151 EAQLK 155

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093058|ref|XP_967697.1| PREDICTED: similar to GrpE-like 1, mitochondrial [Tribolium castaneum] gi|270002666|gb|EEZ99113.1| hypothetical protein TcasGA2_TC005006 [Tribolium castaneum]

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/144 (51%), Positives = 96/144 (66%), Gaps = 10/144 (6%)

Query: 35  LWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLL 94
           L +   N   E ++K++     ++   +E      PK+ E++E L K I  L EKN++LL
Sbjct: 29  LMNMRMNNAPEGQAKQEQVSQNSTPPPSEQ-----PKV-EDIEQLNKNIAELTEKNNELL 82

Query: 95  DKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP 154
           DKYKRALADGEN R R  KQ+ E+KL+GIQ FCKDLLD+AD L  A E+VPKEE+ D NP
Sbjct: 83  DKYKRALADGENLRNRLTKQISEAKLFGIQGFCKDLLDVADVLGKATETVPKEEISDKNP 142

Query: 155 HLKSLYEGLLMTDGNL----KKHA 174
           HLKSLYEGL+MT+  L    K+H 
Sbjct: 143 HLKSLYEGLVMTEAQLQSVFKRHG 166

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106034|ref|XP_001649137.1| hypothetical protein AaeL_AAEL004438 [Aedes aegypti] gi|108879963|gb|EAT44188.1| AAEL004438-PA [Aedes aegypti]

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 4/116 (3%)

Query: 63  ESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYG 122
           E  S  + K+  E+E LKK+ ++LNEK  +L DKYKRALADGEN R+R  KQ+E++KL+G
Sbjct: 54  EELSENEKKLTTEIEGLKKETDSLNEKVKELDDKYKRALADGENMRRRLTKQIEDAKLFG 113

Query: 123 IQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA 174
           IQ FCKDLL++AD L  A E+VPKEE+ D NPHLK+LYEGL MT   L    K+H 
Sbjct: 114 IQGFCKDLLEVADILGHATEAVPKEEISDKNPHLKNLYEGLTMTKAQLNQVFKRHG 169

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788377|gb|EFZ14048.1| hypothetical protein SINV_00910 [Solenopsis invicta]

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 13/158 (8%)

Query: 21  RIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLK 80
           R+P+  +A     F W +        E K D ++    S +TE+    + K+K ELE + 
Sbjct: 30  RLPRVSTA-----FSWQRQHFSTITEEKKPDSTNVPPMSEATEN----EKKLKTELELIN 80

Query: 81  KQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLA 140
           K++  L E    L DKYKRALA+GEN R R  KQ+ ++KL+GIQ FCKDLLD+AD L  A
Sbjct: 81  KELAELKESKDTLEDKYKRALAEGENIRVRLTKQINDAKLFGIQGFCKDLLDVADVLGKA 140

Query: 141 NESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA 174
            ESVPK+E+ + NPHLK LYEGL+MT+  L    KKH 
Sbjct: 141 TESVPKDEITERNPHLKGLYEGLVMTEAQLHKVFKKHG 178

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021654|gb|EGI62013.1| GrpE protein-like protein 1, mitochondrial [Acromyrmex echinatior]

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 8/145 (5%)

Query: 34  FLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDL 93
           F W +        E K D +D    S +TE+    + K+K ELE + K++  L E    L
Sbjct: 36  FSWQRQYFGTITEEKKPDATDVPPMSEATEN----EKKLKTELELINKELGELKESKDTL 91

Query: 94  LDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSN 153
            DKYKRALA+GEN R R  KQ+ ++KL+GIQ FCKDLLD+AD L  A ESVPK+E+ + N
Sbjct: 92  EDKYKRALAEGENIRIRLTKQINDAKLFGIQGFCKDLLDVADILGKATESVPKDEITEQN 151

Query: 154 PHLKSLYEGLLMTDGNL----KKHA 174
           PHLKSLYEGL+MT+  L    KKH 
Sbjct: 152 PHLKSLYEGLVMTEAQLHKVFKKHG 176

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156536983|ref|XP_001608280.1| PREDICTED: grpE protein homolog 1, mitochondrial-like [Nasonia vitripennis]

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 84/115 (73%)

Query: 58  SSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEE 117
           S S+ +S S  + K+K E+E L K +  L EK S L DKYKRALAD EN R R  KQ+E+
Sbjct: 54  SESAEQSLSENEKKLKSEIELLNKDLTELKEKYSQLDDKYKRALADSENLRVRLMKQIED 113

Query: 118 SKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           +KL+GIQ FCKDLLD+AD L  A ESVPK+E+ + NPHLKSLYEGL+MT+  L K
Sbjct: 114 AKLFGIQGFCKDLLDVADILGKATESVPKDEISERNPHLKSLYEGLIMTEAQLHK 168

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350539357|ref|NP_001232371.1| putative GrpE-like 1 mitochondrial precusor variant 2 [Taeniopygia guttata] gi|197127344|gb|ACH43842.1| putative GrpE-like 1 mitochondrial precusor variant 2 [Taeniopygia guttata]

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 8/166 (4%)

Query: 7   LSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTS 66
           ++A  Q   G L+ R+P    A      L   A  +K   ++ ++D       S +++  
Sbjct: 1   MAAVAQCVRGALRPRLPLLSVALRTSPRLLCAATQQKNTGQTLEEDQ------SQSQNEQ 54

Query: 67  NVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSF 126
            V+P   E+L  L ++   L E+  ++ +KYKRALAD EN RQR  K +EE+KLYGIQSF
Sbjct: 55  KVEPSSAEKL--LAEEKAKLEEQLKEVTEKYKRALADAENVRQRSQKLVEEAKLYGIQSF 112

Query: 127 CKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           CKDLL++AD L  A ESVPKEE+KD NPHLKSLYEGL+MT+  ++K
Sbjct: 113 CKDLLEVADILEKATESVPKEEIKDENPHLKSLYEGLVMTEMQIQK 158

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|170043539|ref|XP_001849441.1| grpE [Culex quinquefasciatus] gi|167866847|gb|EDS30230.1| grpE [Culex quinquefasciatus]

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 85/118 (72%), Gaps = 4/118 (3%)

Query: 61  STESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKL 120
           +TE     + K+  E  +LKK++EA+  K  +L DKYKRALADGEN R+R  KQ+E++KL
Sbjct: 47  NTEELPESERKLVGENVELKKELEAVTAKTKELDDKYKRALADGENLRRRLTKQIEDAKL 106

Query: 121 YGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA 174
           +GIQ FCKDLL++AD L  A E+VPKEE+ DSNPHLK+LYEGL MT   L    K+H 
Sbjct: 107 FGIQGFCKDLLEVADILGHATEAVPKEEISDSNPHLKNLYEGLTMTKAQLNQVFKRHG 164

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|197127343|gb|ACH43841.1| putative GrpE-like 1 mitochondrial precusor variant 3 [Taeniopygia guttata]

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 104/166 (62%), Gaps = 8/166 (4%)

Query: 7   LSARQQHFIGELKSRIPQTLSAQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTS 66
           ++A  Q   G L+ R+P    A      L   A  +K   ++ ++D       S +++  
Sbjct: 1   MAAVAQCVRGALRPRLPLLSVALRTSPRLLCAATQQKNTGQTLEEDQ------SQSQNEQ 54

Query: 67  NVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSF 126
            V+P   E+L  L ++   L E+  ++ +KYKRALAD EN RQR  K +EE+KLYGIQSF
Sbjct: 55  KVEPSSAEKL--LAEEKAKLEEQLKEVTEKYKRALADAENVRQRSQKLVEEAKLYGIQSF 112

Query: 127 CKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           CKDLL++AD L  A ESVP+EE+KD NPHLKSLYEGL+MT+  ++K
Sbjct: 113 CKDLLEVADILEKATESVPREEIKDENPHLKSLYEGLVMTEMQIQK 158

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|307176632|gb|EFN66100.1| GrpE protein-like protein, mitochondrial [Camponotus floridanus]

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 5/145 (3%)

Query: 28  AQSNVKFLWSKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALN 87
           +Q +  F W K +     +E KK D+ +       E+T     KIK ELE + K++  L 
Sbjct: 32  SQVSSAFSWQK-QYYGTITEEKKPDAANVPPRVEQEATE----KIKTELELINKELAELK 86

Query: 88  EKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKE 147
           E    L DKYKRALA+GEN R R  KQ+ ++KL+GIQ FCKDLLD+AD L  A ESVPK 
Sbjct: 87  ESKDVLEDKYKRALAEGENIRIRLTKQIHDAKLFGIQGFCKDLLDVADILGKATESVPKA 146

Query: 148 EVKDSNPHLKSLYEGLLMTDGNLKK 172
           E+ + NPHLKSLYEGL+MT+  L K
Sbjct: 147 ELTEKNPHLKSLYEGLIMTEAQLHK 171

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
UNIPROTKB|Q5ZHV6	222	GRPEL1 "GrpE protein homolog"	0.453	0.459	0.596	5e-28
UNIPROTKB|E2RAZ6	230	GRPEL1 "Uncharacterized protei	0.444	0.434	0.582	1.2e-26
UNIPROTKB|I3LVG4	217	LOC100622145 "GrpE protein hom	0.444	0.460	0.563	1.9e-26
UNIPROTKB|Q9HAV7	217	GRPEL1 "GrpE protein homolog 1	0.453	0.470	0.557	4e-26
RGD|70947	217	Grpel1 "GrpE-like 1, mitochond	0.457	0.474	0.551	8.4e-26
MGI|MGI:1334417	217	Grpel1 "GrpE-like 1, mitochond	0.462	0.479	0.547	1.8e-25
UNIPROTKB|Q3SZC1	217	GRPEL1 "GrpE protein homolog 1	0.444	0.460	0.543	2.9e-25
FB|FBgn0014877	213	Roe1 "Roe1" [Drosophila melano	0.457	0.483	0.513	5.9e-25
ZFIN|ZDB-GENE-051120-111	217	grpel1 "GrpE-like 1, mitochond	0.426	0.442	0.57	9.7e-25
UNIPROTKB|F1NG73	196	GRPEL2 "Uncharacterized protei	0.457	0.525	0.425	5.3e-17

UNIPROTKB|Q5ZHV6 GRPEL1 "GrpE protein homolog" [Gallus gallus (taxid:9031)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 62/104 (59%), Positives = 78/104 (75%)

Query:    69 DPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCK 128
             +P   E +  L ++   L E+  ++ DKYKRALAD EN RQR  K +EE+KLYGIQSFCK
Sbjct:    57 EPTAAERM--LTEEKAKLEEQLKEVTDKYKRALADAENVRQRSQKLVEEAKLYGIQSFCK 114

Query:   129 DLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             DLL++AD L  A ESVPKEE+KD NPHLKSLYEGL+MT+  ++K
Sbjct:   115 DLLEVADILEKATESVPKEEIKDENPHLKSLYEGLVMTEVQIQK 158

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|E2RAZ6 GRPEL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 60/103 (58%), Positives = 78/103 (75%)

Query:    70 PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKD 129
             P  ++ L D K ++E   E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKD
Sbjct:    67 PSTEKTLMDEKVKLE---EQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKD 123

Query:   130 LLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             LL++AD L  A +SVPKEEVKD NPHLK+LYEGL+MT+  ++K
Sbjct:   124 LLEVADILEKATQSVPKEEVKDDNPHLKNLYEGLVMTEVQIQK 166

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|I3LVG4 LOC100622145 "GrpE protein homolog" [Sus scrofa (taxid:9823)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 58/103 (56%), Positives = 78/103 (75%)

Query:    70 PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKD 129
             P  ++ L + K ++E   E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKD
Sbjct:    54 PSTEKTLMEEKVKLE---EQLKEAMEKYKRALADTENFRQRSQKLVEEAKLYGIQGFCKD 110

Query:   130 LLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             LL++AD L  A +SVPKEE++D NPHLK+LYEGLLMT+  ++K
Sbjct:   111 LLEVADILEKATQSVPKEEIRDDNPHLKNLYEGLLMTEAQIQK 153

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|Q9HAV7 GRPEL1 "GrpE protein homolog 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 58/104 (55%), Positives = 80/104 (76%)

Query:    69 DPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCK 128
             DP   E+   L+++++ L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ+FCK
Sbjct:    52 DPPATEKTL-LEEKVK-LEEQLKETVEKYKRALADTENLRQRSQKLVEEAKLYGIQAFCK 109

Query:   129 DLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             DLL++AD L  A + VPKEE+KD NPHLK+LYEGL+MT+  ++K
Sbjct:   110 DLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQK 153

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IDA

GO:0030150 "protein import into mitochondrial matrix" evidence=NAS

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

RGD|70947 Grpel1 "GrpE-like 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 59/107 (55%), Positives = 80/107 (74%)

Query:    69 DPKIKEELED---LKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQS 125
             +PK      D   L+++++ L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ 
Sbjct:    48 EPKTDPSSADKTLLEEKVK-LEEQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQG 106

Query:   126 FCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             FCKDLL++AD L  A +SVPKEEV ++NPHLKSLYEGL+MT+  ++K
Sbjct:   107 FCKDLLEVADILEKATQSVPKEEVSNNNPHLKSLYEGLVMTEVQIQK 153

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051087 "chaperone binding" evidence=IEA

MGI|MGI:1334417 Grpel1 "GrpE-like 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 58/106 (54%), Positives = 77/106 (72%)

Query:    69 DPKIKEELED--LKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSF 126
             +PK      D  L ++   L E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ F
Sbjct:    48 EPKTDPPSADKTLLEEKAKLEEQLRETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGF 107

Query:   127 CKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             CKDLL++AD L  A +SVPKEE+ ++NPHLKSLYEGL+MT+  ++K
Sbjct:   108 CKDLLEVADILEKATQSVPKEEISNNNPHLKSLYEGLVMTEVQIQK 153

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

GO:0051087 "chaperone binding" evidence=IEA

UNIPROTKB|Q3SZC1 GRPEL1 "GrpE protein homolog 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 56/103 (54%), Positives = 77/103 (74%)

Query:    70 PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKD 129
             P  ++ L + K ++E   E+  + ++KYKRALAD EN RQR  K +EE+KLYGIQ FCKD
Sbjct:    54 PSTEKTLMEEKVKLE---EQLKETMEKYKRALADTENLRQRSQKLVEEAKLYGIQGFCKD 110

Query:   130 LLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             LL++AD L  A + VP+EE++D NPHLKSLYEGL+MT+  ++K
Sbjct:   111 LLEVADILEKATQCVPQEEIRDDNPHLKSLYEGLVMTEVQIQK 153

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

FB|FBgn0014877 Roe1 "Roe1" [Drosophila melanogaster (taxid:7227)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 56/109 (51%), Positives = 81/109 (74%)

Query:    75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIA 134
             E+E L K++ A  E+N++L+DKYKR+LAD EN R R NKQ+ ++K++GIQSFCKDLL++A
Sbjct:    54 EVEKLTKELAAAKEQNAELMDKYKRSLADSENMRNRLNKQISDAKIFGIQSFCKDLLEVA 113

Query:   135 DTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL----KKHA-HPVE 178
             DTL  A ++VPK+++   N  LK+LYEGL MT  +L    K+H   P++
Sbjct:   114 DTLGHATQAVPKDKLS-GNADLKNLYEGLTMTRASLLQVFKRHGLEPLD 161

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS;NAS

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-051120-111 grpel1 "GrpE-like 1, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 57/100 (57%), Positives = 75/100 (75%)

Query:    73 KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLD 132
             K  LE+ K Q+E   E+  D+ DKYKRALAD EN RQR  K ++++KLYGIQ FCKDLL+
Sbjct:    58 KAFLEE-KTQLE---EQLKDVTDKYKRALADTENLRQRSQKMIDDAKLYGIQGFCKDLLE 113

Query:   133 IADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             +AD L  A ESVPK E+  +NPHLK+LY+GL+MT+  ++K
Sbjct:   114 VADILEKATESVPKTEISAANPHLKNLYDGLVMTEVQIQK 153

GO:0051087 "chaperone binding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1NG73 GRPEL2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 46/108 (42%), Positives = 70/108 (64%)

Query:    69 DPKI--KEELEDLKKQIEA--LNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQ 124
             DP+   K  L D   + +A  L E+  DL ++Y++ALAD EN R+R  K +E++KL+GIQ
Sbjct:    22 DPRDEPKHPLSDCALEHKAIKLEEQVRDLTERYRKALADSENVRRRTQKFVEDAKLFGIQ 81

Query:   125 SFCKDLLDIADTLSLANESVPKE-EVKDSNPHLKSLYEGLLMTDGNLK 171
             SFC+DL+++AD L    ES  +E E  + NP L+ +YEGL + +  L+
Sbjct:    82 SFCRDLVEVADILEKTAESAAEEAEPTNPNPTLQKIYEGLSLIEAKLQ 129

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q99LP6	GRPE1_MOUSE	No assigned EC number	0.6206	0.3866	0.4009	yes	N/A
P48604	GRPE_DROME	No assigned EC number	0.5288	0.44	0.4647	yes	N/A
Q6G563	GRPE_BARHE	No assigned EC number	0.3026	0.6355	0.65	yes	N/A
P97576	GRPE1_RAT	No assigned EC number	0.6321	0.3866	0.4009	yes	N/A
O43047	GRPE_SCHPO	No assigned EC number	0.3483	0.6222	0.6278	yes	N/A
Q3SZC1	GRPE1_BOVIN	No assigned EC number	0.6091	0.3866	0.4009	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	225
pfam01025	165	pfam01025, GrpE, GrpE	8e-19
PRK14141	209	PRK14141, PRK14141, heat shock protein GrpE; Provi	2e-17
cd00446	137	cd00446, GrpE, GrpE is the adenine nucleotide exch	7e-17
COG0576	193	COG0576, GrpE, Molecular chaperone GrpE (heat shoc	2e-14
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	1e-10
PRK14155	208	PRK14155, PRK14155, heat shock protein GrpE; Provi	2e-10
PRK14162	194	PRK14162, PRK14162, heat shock protein GrpE; Provi	2e-10
PRK14161	178	PRK14161, PRK14161, heat shock protein GrpE; Provi	2e-08
PRK14140	191	PRK14140, PRK14140, heat shock protein GrpE; Provi	9e-08
PRK14153	194	PRK14153, PRK14153, heat shock protein GrpE; Provi	1e-07
PRK14151	176	PRK14151, PRK14151, heat shock protein GrpE; Provi	4e-06
PRK14159	176	PRK14159, PRK14159, heat shock protein GrpE; Provi	7e-06
PRK14154	208	PRK14154, PRK14154, heat shock protein GrpE; Provi	1e-05
PRK14143	238	PRK14143, PRK14143, heat shock protein GrpE; Provi	4e-05
PRK14149	191	PRK14149, PRK14149, heat shock protein GrpE; Provi	7e-05
PRK10325	197	PRK10325, PRK10325, heat shock protein GrpE; Provi	9e-05
PRK14148	195	PRK14148, PRK14148, heat shock protein GrpE; Provi	1e-04
PRK14158	194	PRK14158, PRK14158, heat shock protein GrpE; Provi	2e-04
PRK14150	193	PRK14150, PRK14150, heat shock protein GrpE; Provi	2e-04

>gnl|CDD|216249 pfam01025, GrpE, GrpE

 Score = 79.6 bits (197), Expect = 8e-19
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 73  KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLD 132
           ++E E L++++E L E+  +L D+  R LA+ EN R+R  ++ EE+K Y I+ F KDLL 
Sbjct: 10  EDEEEALEEELEELEEEIEELKDRLLRLLAEFENYRKRTEREREEAKKYAIEKFAKDLLP 69

Query: 133 IADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
           + D L  A  +  + E       +KSL EG+ M    L K
Sbjct: 70  VLDNLERALAAAKENED------VKSLVEGVEMILKQLLK 103

Length = 165

>gnl|CDD|172630 PRK14141, PRK14141, heat shock protein GrpE; Provisional

 Score = 77.0 bits (190), Expect = 2e-17
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 45  ESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADG 104
           + ++K  +    A  ++        P   E+  +    +EAL  +N++L D+  R  A+ 
Sbjct: 3   DEKNKNGNPADAARDANNPVDREAKPYEMEDDPE-PDPLEALKAENAELKDRMLRLAAEM 61

Query: 105 ENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLL 164
           EN R+R  + + +++ YGI  F +D+L ++D L  A +++P E    ++  LK+L EG+ 
Sbjct: 62  ENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAEARAAADAGLKALIEGVE 121

Query: 165 MTD 167
           MT+
Sbjct: 122 MTE 124

Length = 209

>gnl|CDD|238252 cd00446, GrpE, GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

 Score = 73.7 bits (182), Expect = 7e-17
 Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 6/81 (7%)

Query: 92  DLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD 151
           +L DK  RALA+ EN R+R  ++ EE++ Y I+ F KDLL + D L  A E+  KEE   
Sbjct: 3   ELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKEE--- 59

Query: 152 SNPHLKSLYEGLLMTDGNLKK 172
               LK+L EG+ MT   L  
Sbjct: 60  ---ELKNLVEGVEMTLKQLLD 77

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Length = 137

>gnl|CDD|223649 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 5/132 (3%)

Query: 41  NKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRA 100
           +K++++E    +    A  S  E     +P+ + ELE+ +++I  L  +  +L DKY RA
Sbjct: 3   DKEQKTEEPDAEETEEAEKSEEEEAEEEEPEEENELEEEQQEIAELEAQLEELKDKYLRA 62

Query: 101 LADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLY 160
            A+ EN R+R  ++ EE+K Y I+ F KDLL + D L  A E+   ++  +     K+L 
Sbjct: 63  QAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDDKDPE-----KALL 117

Query: 161 EGLLMTDGNLKK 172
           EG+ MT   L  
Sbjct: 118 EGVEMTLDQLLD 129

Length = 193

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 28/127 (22%), Positives = 61/127 (48%), Gaps = 12/127 (9%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKR 99
           EN ++    ++ +    A+ ++  + +  +         L+ ++     K ++L D + R
Sbjct: 2   ENTQQNPSEQEAEEAGAAAQAAAAAAAAAED----AAPALEAELAEAEAKAAELQDSFLR 57

Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL 159
           A A+ EN R+R  + + ++  + I+SF + LL + D+L  A        + D +  L+ L
Sbjct: 58  AKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAA--------LADESGDLEKL 109

Query: 160 YEGLLMT 166
            EG+ +T
Sbjct: 110 REGVELT 116

Length = 185

>gnl|CDD|237627 PRK14155, PRK14155, heat shock protein GrpE; Provisional

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 74  EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDI 133
            E +D  ++IEAL  + + L D+  R  A+ EN ++R  +++ +++ Y IQ F +DLL  
Sbjct: 13  FEADDAAQEIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGA 72

Query: 134 ADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL 170
           AD L  A  + PK+    ++P +K+   G+ MT+  L
Sbjct: 73  ADNLGRATAASPKDS---ADPAVKNFIIGVEMTEKEL 106

Length = 208

>gnl|CDD|237631 PRK14162, PRK14162, heat shock protein GrpE; Provisional

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 37  SKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDK 96
           SK E   E+   +++ +D      + E+    D + +  +EDL+K+I  L  KN DL DK
Sbjct: 2   SKEEFPSEKDLPQEETTDEAPKKEAKEAPKEEDQEKQNPVEDLEKEIADLKAKNKDLEDK 61

Query: 97  YKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHL 156
           Y R+ A+ +N + R+ K+  +   Y  QS  KD+L   D L  A      +E        
Sbjct: 62  YLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKADDEAA------ 115

Query: 157 KSLYEGLLMTDGNLKK 172
           K L +G+ MT  +L K
Sbjct: 116 KQLKKGVQMTLDHLVK 131

Length = 194

>gnl|CDD|237630 PRK14161, PRK14161, heat shock protein GrpE; Provisional

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 13/108 (12%)

Query: 73  KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLD 132
             E+  LK +IE       +L DK  R  A+ +N R+R  K  +E+K Y I +F K+LL+
Sbjct: 25  NPEITALKAEIE-------ELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLN 77

Query: 133 IADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK--HAHPVE 178
           ++D LS A    P     +S+  + ++  G+ MT   L K  H H +E
Sbjct: 78  VSDNLSRALAHKP----ANSDVEVTNIIAGVQMTKDELDKVFHKHHIE 121

Length = 178

>gnl|CDD|237622 PRK14140, PRK14140, heat shock protein GrpE; Provisional

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 6/127 (4%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKR 99
           E  ++  E  ++     A     E  +  +    E L++ + +I  L  K  +L ++Y R
Sbjct: 3   EKNEQVEEEVEETEVEEAVEDEVEEETVEEESEAELLDEEQAKIAELEAKLDELEERYLR 62

Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL 159
             AD EN ++R  K+ E ++ Y  QS   DLL   D    A       +++  +   KSL
Sbjct: 63  LQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERA------LQIEADDEQTKSL 116

Query: 160 YEGLLMT 166
            +G+ M 
Sbjct: 117 LKGVEMV 123

Length = 191

>gnl|CDD|184540 PRK14153, PRK14153, heat shock protein GrpE; Provisional

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)

Query: 41  NKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRA 100
             KE  + K ++S++  S SS E    +  + ++   D   + E   E+   L ++  R 
Sbjct: 2   TSKEVGKDKAENSEARNSGSSAEEAEELKEEPEDSTADS--ETEKCREEIESLKEQLFRL 59

Query: 101 LADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEE 148
            A+ +N R+R  +++EE++ + ++    DLL++ D    A ES    E
Sbjct: 60  AAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESARTAE 107

Length = 194

>gnl|CDD|172640 PRK14151, PRK14151, heat shock protein GrpE; Provisional

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 77  EDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADT 136
           +DL  +++ L E+ +   D+  RA AD +N R+R  + +E++  + ++ F  DLL + D+
Sbjct: 23  DDLTARVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDS 82

Query: 137 LSLANE-SVPKEEVKDSNPHLKSLYEG----LLMTDGNLKKH 173
           L    E S   +E       +K + EG    L M    LK++
Sbjct: 83  LERGLELSSADDE------AIKPMREGVELTLKMFQDTLKRY 118

Length = 176

>gnl|CDD|172647 PRK14159, PRK14159, heat shock protein GrpE; Provisional

 Score = 44.7 bits (105), Expect = 7e-06
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 46  SESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGE 105
           SE K++  +  A +S      N+      E   L+K  +       +L DKY RA A+ E
Sbjct: 2   SEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYD-------ELKDKYMRANAEFE 54

Query: 106 NARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLA 140
           N ++R  K+   +  Y  +SF KDLLD+ D L  A
Sbjct: 55  NIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAA 89

Length = 176

>gnl|CDD|237626 PRK14154, PRK14154, heat shock protein GrpE; Provisional

 Score = 44.4 bits (104), Expect = 1e-05
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 9/149 (6%)

Query: 37  SKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDK 96
           +KA+NK E+    +++ +      S E   + +       E L+ Q+  +  K  +   +
Sbjct: 15  TKAKNKWEKVMEAEEEQEEGGGDGSQEMEPHREGLEFPSREKLEGQLTRMERKVDEYKTQ 74

Query: 97  YKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHL 156
           Y RA A+ +N R+R  ++  +   +G +    DLL +AD+L    ES   E+     P +
Sbjct: 75  YLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPASED-----PQV 129

Query: 157 KSLYEGLLMT----DGNLKKHAHPVEYPS 181
           KS+ +G+ +T       L KH   V  P+
Sbjct: 130 KSMRDGMSLTLDLLHNTLAKHGVQVINPN 158

Length = 208

>gnl|CDD|237624 PRK14143, PRK14143, heat shock protein GrpE; Provisional

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 22/96 (22%), Positives = 50/96 (52%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKR 99
           E + E +  + D +++ +S  S  + S         L  L++++E+L ++  +L  +Y R
Sbjct: 33  EQEAELTNPEGDAAEAESSPDSGSAASETAADNAARLAQLEQELESLKQELEELNSQYMR 92

Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIAD 135
             AD +N R+R +++ E+ +L    +   ++L + D
Sbjct: 93  IAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVD 128

Length = 238

>gnl|CDD|184538 PRK14149, PRK14149, heat shock protein GrpE; Provisional

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 24/136 (17%)

Query: 37  SKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDK 96
            ++E K    + ++ +    AS    E        IKE+ E           K  ++ +K
Sbjct: 17  PESEEKACACKEQQGEEKQEASEKEGE--------IKEDFE----------LKYKEMHEK 58

Query: 97  YKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHL 156
           Y R  AD EN ++R  +    +  Y  +    DLL + D L  A +S             
Sbjct: 59  YLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSA------AEVDKE 112

Query: 157 KSLYEGLLMTDGNLKK 172
            +L +GL +T   L +
Sbjct: 113 SALTKGLELTMEKLHE 128

Length = 191

>gnl|CDD|182379 PRK10325, PRK10325, heat shock protein GrpE; Provisional

 Score = 41.6 bits (97), Expect = 9e-05
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 15/135 (11%)

Query: 37  SKAENKKEESESKK----DDSDSTASSSSTESTSNVDPKIKEELEDLKKQI-EALNEKNS 91
           S  E K  E ++ +    D  +   +     S   VDP+  E++ +L+ Q+ EA   +  
Sbjct: 2   SSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPR-DEKIANLEAQLAEAQTRERD 60

Query: 92  DLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD 151
            +L    R  A+ EN R+R    +E++  + ++ F  +LL + D+L  A E   K     
Sbjct: 61  GIL----RVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA---- 112

Query: 152 SNPHLKSLYEGLLMT 166
            NP + ++ EG+ +T
Sbjct: 113 -NPDMSAMVEGIELT 126

Length = 197

>gnl|CDD|172637 PRK14148, PRK14148, heat shock protein GrpE; Provisional

 Score = 41.7 bits (97), Expect = 1e-04
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNV--DPKIKEELEDLKKQIEALNEKNSDLLDKY 97
           + K    +   D   +    ++ ES S    +  ++E+LE  K  I+ L +      D+ 
Sbjct: 4   QEKSNVEDKSLDIETAAQVETAQESASGALEELSVEEQLERAKDTIKELEDSCDQFKDEA 63

Query: 98  KRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVK 150
            RA A+ EN R+R  + +  ++ +GI+ F K+LL + D++    E   K EVK
Sbjct: 64  LRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSI----EQALKHEVK 112

Length = 195

>gnl|CDD|172646 PRK14158, PRK14158, heat shock protein GrpE; Provisional

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIE-ALNEKNSDLL---D 95
           + KK  S    +   + A+  +  +    +        D  K++E AL  K ++     D
Sbjct: 2   DKKKHGSHQIAEALKAKAAKEAEAAQGKPEAAQPVAAADRIKELEEALAAKEAEAAANWD 61

Query: 96  KYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPH 155
           KY R  AD EN R+R  K+ EE   YG +S   ++L   D +  A +   +E        
Sbjct: 62  KYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADEES------- 114

Query: 156 LKSLYEGLLMTDGNL 170
           + ++ EG+ MT   L
Sbjct: 115 MSAIIEGIRMTLSML 129

Length = 194

>gnl|CDD|184539 PRK14150, PRK14150, heat shock protein GrpE; Provisional

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKR 99
           E   EE E++ +  +    +   +     D +I  ELE    + +A  E++S L     R
Sbjct: 11  EQVSEEIEAEVEQQEEADEAELEDELDEADARI-AELEAQLAEAQA-EERDSVL-----R 63

Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL 159
           A A+ EN R+R  + +E++  + ++ F  +LL + D L  A ++  KE     N  LK+L
Sbjct: 64  ARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADKE-----NEALKAL 118

Query: 160 YEGLLMT 166
            EG+ +T
Sbjct: 119 IEGVELT 125

Length = 193

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
PRK14153	194	heat shock protein GrpE; Provisional	100.0
PRK14148	195	heat shock protein GrpE; Provisional	100.0
PRK14161	178	heat shock protein GrpE; Provisional	100.0
PRK14162	194	heat shock protein GrpE; Provisional	100.0
PRK14151	176	heat shock protein GrpE; Provisional	100.0
PRK14158	194	heat shock protein GrpE; Provisional	100.0
PRK14146	215	heat shock protein GrpE; Provisional	100.0
PRK14147	172	heat shock protein GrpE; Provisional	100.0
PRK14155	208	heat shock protein GrpE; Provisional	100.0
PRK14140	191	heat shock protein GrpE; Provisional	100.0
PRK14141	209	heat shock protein GrpE; Provisional	100.0
PRK14139	185	heat shock protein GrpE; Provisional	100.0
PRK14143	238	heat shock protein GrpE; Provisional	100.0
PRK14154	208	heat shock protein GrpE; Provisional	100.0
PRK14145	196	heat shock protein GrpE; Provisional	100.0
PRK14144	199	heat shock protein GrpE; Provisional	100.0
PRK14160	211	heat shock protein GrpE; Provisional	100.0
PRK14159	176	heat shock protein GrpE; Provisional	100.0
PRK14150	193	heat shock protein GrpE; Provisional	100.0
PRK14163	214	heat shock protein GrpE; Provisional	100.0
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	100.0
PRK10325	197	heat shock protein GrpE; Provisional	100.0
PRK14149	191	heat shock protein GrpE; Provisional	100.0
PRK14156	177	heat shock protein GrpE; Provisional	100.0
PRK14157	227	heat shock protein GrpE; Provisional	100.0
PRK14142	223	heat shock protein GrpE; Provisional	99.98
PRK14164	218	heat shock protein GrpE; Provisional	99.97
KOG3003|consensus	236		99.97
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	99.97
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	99.96
PF06156	107	DUF972: Protein of unknown function (DUF972); Inte	91.59
PRK13169	110	DNA replication intiation control protein YabA; Re	87.66
COG4467	114	Regulator of replication initiation timing [Replic	84.72
COG1579	239	Zn-ribbon protein, possibly nucleic acid-binding [	83.1

>PRK14153 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.6e-38  Score=269.66  Aligned_cols=134  Identities=20%  Similarity=0.193  Sum_probs=124.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCC
Q psy2067          74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSN  153 (225)
Q Consensus        74 ~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~  153 (225)
                      .++..+..+++.+++++.+++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+..      
T Consensus        33 ~~~~~~~~ei~~l~~e~~elkd~~lR~~AEfeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~~------  106 (194)
T PRK14153         33 PEDSTADSETEKCREEIESLKEQLFRLAAEFDNFRKRTAREMEENRKFVLEQVLLDLLEVTDNFERALESARTA------  106 (194)
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc------
Confidence            44677888999999999999999999999999999999999999999999999999999999999999987642      


Q ss_pred             hhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         154 PHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       154 ~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ....+|++||+||+++|.++|+++  ||++|+|    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus       107 ~~~~~l~~Gvemi~k~~~~vL~k~--Gv~~I~~----~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l  173 (194)
T PRK14153        107 EDMNSIVEGIEMVSKQFFSILEKY--GLERIEC----EGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGYAL  173 (194)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHC--CCeeeCC----CCCCCChhHhceeeeeCCCCCCcCEEEEEeeCCcEe
Confidence            346899999999999999999999  7799999    8999999999999       5789999999999974

>PRK14148 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.4e-37  Score=266.86  Aligned_cols=136  Identities=24%  Similarity=0.300  Sum_probs=126.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      ...+++.++.+++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+..    
T Consensus        38 ~~~e~~~l~~~l~~l~~e~~elkd~~lR~~Ae~eN~rKR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~----  113 (195)
T PRK14148         38 VEEQLERAKDTIKELEDSCDQFKDEALRAKAEMENIRKRAERDVSNARKFGIEKFAKELLPVIDSIEQALKHEVKL----  113 (195)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc----
Confidence            4567888999999999999999999999999999999999999999999999999999999999999999987642    


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                        ....+++.||+||+++|.++|+++  ||++|+|    .|.+|||+.|+||       +++|+|++|+|+||..
T Consensus       114 --~~~~~l~~Gv~mi~k~l~~vL~k~--Gv~~I~~----~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l  180 (195)
T PRK14148        114 --EEAIAMKEGIELTAKMLVDILKKN--GVEELDP----KGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYML  180 (195)
T ss_pred             --hhHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEe
Confidence              246789999999999999999999  7789998    8999999999999       5789999999999975

>PRK14161 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-37  Score=264.17  Aligned_cols=143  Identities=27%  Similarity=0.368  Sum_probs=128.6

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcc
Q psy2067          68 VDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKE  147 (225)
Q Consensus        68 ~~~~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~  147 (225)
                      +++-+.+.++.++++++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.+
T Consensus        13 ~~~~~~~~~~~~~~ei~~l~~e~~elkd~~lR~~AefeN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~   92 (178)
T PRK14161         13 INDIAEEIVETANPEITALKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLSRALAHKPAN   92 (178)
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcCccc
Confidence            34456667788899999999999999999999999999999999999999999999999999999999999999987653


Q ss_pred             cccCCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         148 EVKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       148 ~~~~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      .    +....++++||+||+++|.++|+++  ||++|+|.   +|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus        93 ~----~~~~~~~~~Gv~mi~k~l~~vL~~~--Gv~~I~~~---~G~~FDP~~HEAv~~~~~~~~~~gtVi~v~q~GY~l  162 (178)
T PRK14161         93 S----DVEVTNIIAGVQMTKDELDKVFHKH--HIEEIKPE---IGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKI  162 (178)
T ss_pred             c----chhHHHHHHHHHHHHHHHHHHHHHC--CCEEecCC---CCCCCChHHhhhheeeCCCCCCcCEEEEEeeCCcEe
Confidence            1    2335789999999999999999999  77899873   5999999999999       5689999999999974

>PRK14162 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.7e-37  Score=264.97  Aligned_cols=139  Identities=29%  Similarity=0.301  Sum_probs=126.8

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCccc
Q psy2067          69 DPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEE  148 (225)
Q Consensus        69 ~~~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~  148 (225)
                      +.....++..++.+++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.  
T Consensus        34 ~~~~~~e~~~l~~~l~~l~~e~~elkd~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~--  111 (194)
T PRK14162         34 DQEKQNPVEDLEKEIADLKAKNKDLEDKYLRSQAEIQNMQNRYAKERAQLIKYESQSLAKDVLPAMDNLERALAVKAD--  111 (194)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc--
Confidence            344456778899999999999999999999999999999999999999999999999999999999999999998754  


Q ss_pred             ccCCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc--------ccCCeeeeeecccchh
Q psy2067         149 VKDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI--------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       149 ~~~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi--------~~~n~VveV~QkGY~~  219 (225)
                          +....+|+.||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||        .++|+|++|+|+||..
T Consensus       112 ----~~~~~~l~~Gvemi~k~l~~vL~~~--GV~~I~~----~G~~FDP~~HEAv~~~~~~~~~~~gtVv~v~qkGY~l  180 (194)
T PRK14162        112 ----DEAAKQLKKGVQMTLDHLVKALKDH--GVTEIKA----DGEKFDPTLHQAVQTVAAENDDQKDHVVQVLQKGYQY  180 (194)
T ss_pred             ----chhHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhHhhhheeecCCCCCCcCEEEEEeeCCcEe
Confidence                3356899999999999999999999  7789998    8999999999999        2369999999999974

>PRK14151 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.9e-37  Score=261.33  Aligned_cols=134  Identities=22%  Similarity=0.284  Sum_probs=123.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCCh
Q psy2067          75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP  154 (225)
Q Consensus        75 ~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~  154 (225)
                      ....++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.+     +.
T Consensus        21 ~~~~l~~~i~~le~e~~el~d~~lR~~Ae~eN~rkR~~kE~e~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~-----~~   95 (176)
T PRK14151         21 AGDDLTARVQELEEQLAAAKDQSLRAAADLQNVRRRAEQDVEKAHKFALEKFAGDLLPVVDSLERGLELSSAD-----DE   95 (176)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-----ch
Confidence            5566788899999999999999999999999999999999999999999999999999999999999987543     34


Q ss_pred             hHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         155 HLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       155 ~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ..+++++||+||+++|.++|+++  ||++|+|    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus        96 ~~~~~~~Gv~mi~k~l~~~L~k~--Gv~~i~~----~G~~FDP~~HEAv~~~~~~~~~~gtI~~v~qkGY~l  161 (176)
T PRK14151         96 AIKPMREGVELTLKMFQDTLKRY--QLEAVDP----HGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLL  161 (176)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCHHHhhcceeeCCCCCCcCeEEEEeeCCcEE
Confidence            56899999999999999999999  7789998    8999999999999       5789999999999974

>PRK14158 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.4e-37  Score=263.08  Aligned_cols=137  Identities=21%  Similarity=0.228  Sum_probs=125.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCccccc
Q psy2067          71 KIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVK  150 (225)
Q Consensus        71 ~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~  150 (225)
                      ....++..++.+++.+++++.+++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.    
T Consensus        37 ~~~~~~~~le~~l~~le~e~~el~d~~lR~~AefeN~RkR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~----  112 (194)
T PRK14158         37 AAADRIKELEEALAAKEAEAAANWDKYLRERADLENYRKRVQKEKEELLKYGNESLILEILPAVDNMERALDHADE----  112 (194)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccCc----
Confidence            3445678899999999999999999999999999999999999999999999999999999999999999998653    


Q ss_pred             CCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         151 DSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       151 ~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                         ....++++||+||+++|.++|+++  ||++|+|.   +|.+|||+.|+||       .++|+|++|+|+||..
T Consensus       113 ---~~~~~i~~Gv~mi~k~l~~vLek~--Gv~~I~~~---~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l  180 (194)
T PRK14158        113 ---ESMSAIIEGIRMTLSMLLSTLKKF--GVTPVEAE---KGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLL  180 (194)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHC--CCEEecCC---CCCCCChHHhhhheeecCCCCCcCEEEEEeeCCcEe
Confidence               246789999999999999999999  77899863   6999999999999       5789999999999974

>PRK14146 heat shock protein GrpE; Provisional

Probab=100.00  E-value=4.2e-37  Score=267.51  Aligned_cols=132  Identities=15%  Similarity=0.183  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChh
Q psy2067          76 LEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPH  155 (225)
Q Consensus        76 i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~  155 (225)
                      +..|+.++..+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.      +..
T Consensus        56 ~~~l~~~l~~l~~e~~el~d~~lR~~AdfeN~rkR~~kE~e~~~~~a~e~~~~~lLpv~DnlerAl~~~~~------~~~  129 (215)
T PRK14146         56 ETSLQKELDNAKKEIESLKDSWARERAEFQNFKRRSAQEFVSIRKEAVKSLVSGFLNPIDNLERVGATQNQ------SEE  129 (215)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc------cch
Confidence            56678889999999999999999999999999999999999999999999999999999999999988653      235


Q ss_pred             HHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         156 LKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       156 ~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ..+|++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||       +++|+|++|+|+||..
T Consensus       130 ~~~l~~Gv~mi~k~l~~~L~k~--Gv~~i~~----~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l  194 (215)
T PRK14146        130 LKPFVEGVKMILKEFYSVLEKS--NVIRFDP----KGEPFDPMSMEALSSEEGDQYSEETVIDVYQAGYYY  194 (215)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHC--cCeeeCC----CCCCCChhHhceeeeecCCCCCcCEEEEEeeCCeEe
Confidence            6899999999999999999999  6789998    8999999999999       5789999999999964

>PRK14147 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.3e-37  Score=258.93  Aligned_cols=131  Identities=23%  Similarity=0.264  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCCh
Q psy2067          75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP  154 (225)
Q Consensus        75 ~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~  154 (225)
                      +.+.+..+++.+++++++++++|+|++|||+|||||++||++++++||.++|+++||||+|||+||+.+.+.        
T Consensus        19 ~~~~l~~~l~~l~~e~~elkd~~lR~~Ad~eN~rkR~~kE~e~~~~~a~~~~~~~lLpv~DnlerAl~~~~~--------   90 (172)
T PRK14147         19 ETDPLKAEVESLRSEIALVKADALRERADLENQRKRIARDVEQARKFANEKLLGELLPVFDSLDAGLTAAGT--------   90 (172)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccc--------
Confidence            444577889999999999999999999999999999999999999999999999999999999999987653        


Q ss_pred             hHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         155 HLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       155 ~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ...++++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||       .++|+|++|+|+||..
T Consensus        91 ~~~~l~~Gv~mi~k~l~~~L~~~--Gv~~i~~----~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l  156 (172)
T PRK14147         91 EPSPLRDGLELTYKQLLKVAADN--GLTLLDP----VGQPFNPEHHQAISQGEAEGVAPGHVVQVFQKGYLL  156 (172)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEe
Confidence            24689999999999999999999  7789998    8999999999999       5689999999999974

>PRK14155 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.2e-37  Score=264.81  Aligned_cols=137  Identities=26%  Similarity=0.375  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCCh
Q psy2067          75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP  154 (225)
Q Consensus        75 ~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~  154 (225)
                      +.+.+..+++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+...   .+.
T Consensus        14 ~~~~l~~~l~~le~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~~---~~~   90 (208)
T PRK14155         14 EADDAAQEIEALKAEVAALKDQALRYAAEAENTKRRAEREMNDARAYAIQKFARDLLGAADNLGRATAASPKDS---ADP   90 (208)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhHHHHHhcccccc---cch
Confidence            44677888999999999999999999999999999999999999999999999999999999999999976421   134


Q ss_pred             hHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         155 HLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       155 ~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      .++++++||+||+++|.++|+++  ||++|+|.   +|.+|||++|+||       +++|+|++|+|+||.+
T Consensus        91 ~~~~i~~Gvemi~k~~~~~L~k~--GV~~I~~~---~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l  157 (208)
T PRK14155         91 AVKNFIIGVEMTEKELLGAFERN--GLKKIDPA---KGDKFDPHLHQAMMEQPSTEVAAGGVLQVMQAGYEL  157 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHC--CCceecCC---CCCCCChhHhceeeeecCCCCCcCeEEEEeeCCeEe
Confidence            57899999999999999999999  66899874   6999999999999       5689999999999975

>PRK14140 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-36  Score=260.46  Aligned_cols=137  Identities=28%  Similarity=0.296  Sum_probs=125.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCccccc
Q psy2067          71 KIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVK  150 (225)
Q Consensus        71 ~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~  150 (225)
                      +....+..++++++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.    
T Consensus        34 ~~~~~~~~l~~~i~~l~~ei~elkd~~lR~~Ae~eN~rkR~~rE~~~~~~~a~~~~~~~LLpvlDnLerAl~~~~~----  109 (191)
T PRK14140         34 SEAELLDEEQAKIAELEAKLDELEERYLRLQADFENYKRRIQKENEAAEKYRAQSLASDLLPALDNFERALQIEAD----  109 (191)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc----
Confidence            3445778899999999999999999999999999999999999999999999999999999999999999998654    


Q ss_pred             CCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         151 DSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       151 ~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                        +...++++.||+||+++|.++|+++  ||++|++    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus       110 --~~~~~~i~~Gv~mi~k~l~~~L~k~--GV~~i~~----~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l  177 (191)
T PRK14140        110 --DEQTKSLLKGVEMVHRQLLEALKKE--GVEVIEA----VGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKL  177 (191)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHC--CCEeeCC----CCCCCChHHhccceeeCCCCCCcCeEEEEeeCCeEe
Confidence              3356899999999999999999999  6689988    8999999999999       5689999999999964

>PRK14141 heat shock protein GrpE; Provisional

Probab=100.00  E-value=6.9e-37  Score=265.00  Aligned_cols=137  Identities=25%  Similarity=0.378  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhH
Q psy2067          77 EDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHL  156 (225)
Q Consensus        77 ~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~  156 (225)
                      ..++.+++.+++++.+++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+++.+.....+..+
T Consensus        34 ~~~~~~i~~le~e~~elkd~~lR~~Ae~eN~RKR~~kE~e~~~~~a~~~~~~dLLpViDnLerAl~~~~~~~~~~~~~~~  113 (209)
T PRK14141         34 DPEPDPLEALKAENAELKDRMLRLAAEMENLRKRTQRDVADARAYGIAGFARDMLSVSDNLRRALDAIPAEARAAADAGL  113 (209)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhccccccccccchhH
Confidence            45778899999999999999999999999999999999999999999999999999999999999987643111113457


Q ss_pred             HhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         157 KSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       157 ~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ++|++||+||+++|.++|+++  ||++|+|    +|.+|||++|+||       +++|+|++|+|+||..
T Consensus       114 ~~l~eGv~mi~k~l~~vLek~--GV~~I~~----~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l  177 (209)
T PRK14141        114 KALIEGVEMTERAMLNALERH--GVKKLDP----EGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGYTI  177 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC--CCEEECC----CCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEe
Confidence            899999999999999999999  7789998    8999999999999       5689999999999974

>PRK14139 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-36  Score=259.26  Aligned_cols=133  Identities=27%  Similarity=0.336  Sum_probs=123.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCC
Q psy2067          73 KEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDS  152 (225)
Q Consensus        73 ~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~  152 (225)
                      ..++..++.+++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.      
T Consensus        31 ~~e~~~l~~~l~~le~e~~elkd~~lR~~AefeN~rKR~~kE~e~~~~~a~~~~~~~LLpv~DnLerAl~~~~~------  104 (185)
T PRK14139         31 EDAAPALEAELAEAEAKAAELQDSFLRAKAETENVRRRAQEDVAKAHKFAIESFAESLLPVKDSLEAALADESG------  104 (185)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc------
Confidence            34677788999999999999999999999999999999999999999999999999999999999999977532      


Q ss_pred             ChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc------ccCCeeeeeecccchh
Q psy2067         153 NPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       153 ~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi------~~~n~VveV~QkGY~~  219 (225)
                        ...++++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+|+      .++|+|++|+|+||..
T Consensus       105 --~~~~l~~Gv~mi~k~l~~vL~k~--Gv~~I~~----~G~~FDP~~HEAv~~~~~~~~~gtVi~V~qkGY~l  169 (185)
T PRK14139        105 --DLEKLREGVELTLKQLTSAFEKG--RVVEINP----VGEKFDPHQHQAISMVPAEQEPNTVVAVLQKGYTI  169 (185)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHHC--CCceeCC----CCCCCChHHhheeeeecCCCCcCEEEEEeeCCcEe
Confidence              35789999999999999999999  6789999    8999999999999      4689999999999974

>PRK14143 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.3e-36  Score=266.34  Aligned_cols=137  Identities=18%  Similarity=0.178  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      ...++..|+.+++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+++..    
T Consensus        65 ~~~~~~~l~~el~~l~~e~~elkd~~lR~~AdfeN~RKR~~kE~e~~~~~a~~~~~~~lLpV~DnLerAl~~~~~~----  140 (238)
T PRK14143         65 NAARLAQLEQELESLKQELEELNSQYMRIAADFDNFRKRTSREQEDLRLQLKCNTLSEILPVVDNFERARQQLKPE----  140 (238)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhccccc----
Confidence            5567888999999999999999999999999999999999999999999999999999999999999999987643    


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       +.....|+.||+||+++|+++|+++  ||++|++    +|.+|||++|+||       +++|+|++|+|+||.+
T Consensus       141 -~~~~~~l~~Gve~i~k~l~~~L~k~--GV~~i~~----~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l  208 (238)
T PRK14143        141 -GEEAQALHRSYQGLYKQLVDVLKRL--GVSPMRV----VGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHL  208 (238)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHC--CCeeeCC----CCCCCChHHhheeeeecCCCCCcCeEEEEeeCCcee
Confidence             2345789999999999999999999  7789998    8999999999999       5789999999999975

>PRK14154 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.2e-36  Score=263.30  Aligned_cols=136  Identities=24%  Similarity=0.302  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCC
Q psy2067          74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSN  153 (225)
Q Consensus        74 ~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~  153 (225)
                      ..+..|+++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+....     +
T Consensus        52 ~~~~~l~~el~~le~e~~elkd~~lRl~ADfeNyRKR~~kE~e~~~~~a~e~~~~~LLpVlDnLeRAL~~~~~~-----~  126 (208)
T PRK14154         52 PSREKLEGQLTRMERKVDEYKTQYLRAQAEMDNLRKRIEREKADIIKFGSKQLITDLLPVADSLIHGLESPASE-----D  126 (208)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-----c
Confidence            56777889999999999999999999999999999999999999999999999999999999999999876432     3


Q ss_pred             hhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         154 PHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       154 ~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      +.+++|++||+||+++|.++|+++  ||++|+|.   +|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus       127 ~~~~~l~eGvemi~k~l~~vL~k~--GVe~I~~~---~G~~FDP~~HEAv~~~~~~~~~~gtVveV~qkGY~l  194 (208)
T PRK14154        127 PQVKSMRDGMSLTLDLLHNTLAKH--GVQVINPN---PGDPFDPALHEAMSVQAVPDAKPDTIIQVLQKGYQL  194 (208)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHC--CCEEecCC---CCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEe
Confidence            456899999999999999999999  77899873   5999999999999       4689999999999974

>PRK14145 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.5e-36  Score=259.28  Aligned_cols=133  Identities=23%  Similarity=0.213  Sum_probs=123.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      ...++..|++++..+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+      
T Consensus        43 ~~~e~~~l~~~l~~le~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~e~~~~~LLpV~DnLerAl~~~~------  116 (196)
T PRK14145         43 TVDEIEELKQKLQQKEVEAQEYLDIAQRLKAEFENYRKRTEKEKSEMVEYGKEQVILELLPVMDNFERALASSG------  116 (196)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccc------
Confidence            45567889999999999999999999999999999999999999999999999999999999999999998732      


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                         ...++++||+||+++|.++|+++  ||++|+|    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus       117 ---~~~~l~~Gv~mi~k~l~~vL~k~--GVe~I~~----~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l  182 (196)
T PRK14145        117 ---DYNSLKEGIELIYRQFKKILDKF--GVKEIEA----EGQIFDPYKHHAVMQEEVEGKQPNEIIEVFQKGYYL  182 (196)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCchhhheeeeeCCCCCCcCEEEEEeeCCcEe
Confidence               24679999999999999999999  7789998    8999999999999       5689999999999974

>PRK14144 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3.8e-36  Score=258.58  Aligned_cols=133  Identities=23%  Similarity=0.269  Sum_probs=122.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCC
Q psy2067          74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSN  153 (225)
Q Consensus        74 ~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~  153 (225)
                      .++..+.++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+++..      
T Consensus        45 ~~~~~l~~~i~~le~e~~elkdk~lR~~AefeN~RKR~~kE~e~~~~~a~~~~~~~LLpV~DnLerAl~~~~~~------  118 (199)
T PRK14144         45 PSYTALEEQLTLAEQKAHENWEKSVRALAELENVRRRMEREVANAHKYGVEKLISALLPVVDSLEQALQLADKN------  118 (199)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHccccc------
Confidence            35567888999999999999999999999999999999999999999999999999999999999999987642      


Q ss_pred             hhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         154 PHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       154 ~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       ...+++.||+||+++|.++|+++  ||++|+|    +|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus       119 -~~~~i~~Gv~mi~k~l~~~L~k~--GV~~I~~----~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l  184 (199)
T PRK14144        119 -SDPSMHEGLELTMKLFLDALQKF--DVEQIDP----LGQTFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKL  184 (199)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEE
Confidence             12579999999999999999999  7789998    8999999999999       4689999999999974

>PRK14160 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.1e-36  Score=262.24  Aligned_cols=134  Identities=22%  Similarity=0.225  Sum_probs=122.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccc
Q psy2067          70 PKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEV  149 (225)
Q Consensus        70 ~~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~  149 (225)
                      ..+..++..|++++..+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.   
T Consensus        57 ~~l~~e~~~l~~~l~~l~~e~~elkd~~lR~~AefeN~RKR~~kE~e~~~~~a~e~~~~~LLpVlDnLerAl~~~~~---  133 (211)
T PRK14160         57 EELKDENNKLKEENKKLENELEALKDRLLRTVAEYDNYRKRTAKEKEGIYSDACEDVLKELLPVLDNLERAAAVEGS---  133 (211)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc---
Confidence            34556778899999999999999999999999999999999999999999999999999999999999999987432   


Q ss_pred             cCCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         150 KDSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       150 ~~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                            ..+++.||+||+++|.++|+++  ||++|+|    .| +|||++|+||       +++|+|++|+|+||..
T Consensus       134 ------~~~l~~Gv~mi~kql~~vL~k~--GVe~I~~----~G-~FDP~~HEAv~~~~~~e~~~gtVveV~qkGY~l  197 (211)
T PRK14160        134 ------VEDLKKGIEMTVKQFKTSLEKL--GVEEIST----EG-EFDPNLHNAVMHVEDENYGENEIVEVFQKGYKR  197 (211)
T ss_pred             ------hhHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CC-CCChHHhceeeeeCCCCCCcCeEEEEeeCCcEe
Confidence                  3579999999999999999999  7789988    67 8999999999       5789999999999974

>PRK14159 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.3e-36  Score=255.89  Aligned_cols=127  Identities=24%  Similarity=0.226  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHhH
Q psy2067          80 KKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL  159 (225)
Q Consensus        80 ~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~l  159 (225)
                      ..+++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.+      ....++
T Consensus        29 ~~~i~~l~~e~~elkd~~lR~~AdfeN~rkR~~rE~e~~~~~a~~~~~~~LLpV~DnlerAl~~~~~~------~~~~~l  102 (176)
T PRK14159         29 DVEQNKLQKDYDELKDKYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECHD------EISLKI  102 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc------chHHHH
Confidence            45677889999999999999999999999999999999999999999999999999999999987642      245789


Q ss_pred             HHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         160 YEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       160 ~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ++||+||+++|.++|+++  ||++|++    .| +|||+.|+||       +++|+|++|+|+||..
T Consensus       103 ~~Gv~mi~k~l~~vL~k~--Gv~~I~~----~G-~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l  162 (176)
T PRK14159        103 KEGVQNTLDLFLKKLEKH--GVALIKE----EK-EFDPNLHEAMFHVDSENHQSGEVVQVLQKGYKI  162 (176)
T ss_pred             HHHHHHHHHHHHHHHHHC--cCEecCC----CC-CCChHHhhhhheeCCCCCCcCeEEEEeeCCcEe
Confidence            999999999999999999  7789988    67 6999999999       5789999999999975

>PRK14150 heat shock protein GrpE; Provisional

Probab=100.00  E-value=3.2e-36  Score=258.22  Aligned_cols=134  Identities=26%  Similarity=0.320  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      ...++..|++++..+++   +++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+...+    
T Consensus        39 ~~~~i~~l~~~l~~~~~---~~kd~~lR~~AefeN~rkR~~kE~~~~~~~a~~~~~~~lL~v~DnlerAl~~~~~~----  111 (193)
T PRK14150         39 ADARIAELEAQLAEAQA---EERDSVLRARAEVENIRRRAEQDVEKAHKFALEKFANELLPVIDNLERALQAADKE----  111 (193)
T ss_pred             hHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHhccccc----
Confidence            34456666666666555   68999999999999999999999999999999999999999999999999876532    


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       +...++|+.||+||+++|.++|+++  ||++|+|    +|.+|||++|+|+       .++|+|++|+|+||..
T Consensus       112 -~~~~~~~~~Gv~mi~~~l~~~L~~~--Gv~~i~~----~G~~FDP~~HeAv~~~~~~~~~~gtI~~v~q~GY~l  179 (193)
T PRK14150        112 -NEALKALIEGVELTLKSLLDTVAKF--GVEVVGP----VGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTL  179 (193)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHC--CCeeeCC----CCCCCCHhHcceeeeeCCCCCCcCEEEEEeeCCeEe
Confidence             3356899999999999999999999  7789998    8999999999999       5689999999999974

>PRK14163 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.2e-36  Score=259.20  Aligned_cols=129  Identities=16%  Similarity=0.120  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      .......|+.++..+++++.+++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.       
T Consensus        38 ~~~~~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~rkR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~-------  110 (214)
T PRK14163         38 DAAATAGLTAQLDQVRTALGERTADLQRLQAEYQNYRRRVERDRVTVKEIAVANLLSELLPVLDDVGRAREHG-------  110 (214)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhch-------
Confidence            3344678899999999999999999999999999999999999999999999999999999999999999762       


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                            .|+.||+||+++|+++|+++  ||++|+|    +|.+|||++|+||       .++|+|++|+|+||.+
T Consensus       111 ------~l~~Gv~mi~k~l~~~L~k~--Gv~~I~~----~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l  173 (214)
T PRK14163        111 ------ELVGGFKSVAESLETTVAKL--GLQQFGK----EGEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRI  173 (214)
T ss_pred             ------hHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhHhceeeeecCCCCCcCEEEEEeeCCcCc
Confidence                  48999999999999999999  7789998    8999999999999       5689999999999975

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.3e-36  Score=255.95  Aligned_cols=130  Identities=33%  Similarity=0.398  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHh
Q psy2067          79 LKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKS  158 (225)
Q Consensus        79 L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~  158 (225)
                      +..+++.|+.++++++++|+|++|||+|||||++|+++++++||+++|+++||||+|||+|||.+.+...    +.. ++
T Consensus        41 ~~~~i~~Le~q~~e~~~~~lr~~Ae~eN~rkR~~re~e~~~k~a~e~~~~dlLpviDnlerAl~~~~~~~----d~~-~~  115 (193)
T COG0576          41 EQQEIAELEAQLEELKDKYLRAQAEFENLRKRTEREREEAKKYAIEKFAKDLLPVIDNLERALEAAEDDK----DPE-KA  115 (193)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----chH-HH
Confidence            4478999999999999999999999999999999999999999999999999999999999999876542    222 78


Q ss_pred             HHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         159 LYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       159 l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      |+.||+||+++|.++|.++  ||+.|.|    .|+.|||++|+||       +++|+|++|+|+||..
T Consensus       116 l~~Gvem~~~~l~~~L~k~--Gv~~i~~----~Ge~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l  177 (193)
T COG0576         116 LLEGVEMTLDQLLDALEKL--GVEEIGP----EGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKL  177 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCHHHhhheeeecCCCCCCCeEEEEeecCeee
Confidence            9999999999999999999  7799998    8999999999999       6889999999999975

>PRK10325 heat shock protein GrpE; Provisional

Probab=100.00  E-value=7.5e-36  Score=256.65  Aligned_cols=131  Identities=21%  Similarity=0.270  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCCh
Q psy2067          75 ELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNP  154 (225)
Q Consensus        75 ~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~  154 (225)
                      .+..|+.++.+++.   +++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+..     +.
T Consensus        43 ~~~~l~~~~~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~lLpv~DnlerAl~~~~~~-----~~  114 (197)
T PRK10325         43 KIANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA-----NP  114 (197)
T ss_pred             HHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc-----ch
Confidence            44455544444432   25899999999999999999999999999999999999999999999999987532     23


Q ss_pred             hHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         155 HLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       155 ~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      ..++|+.||+||+++|.++|+++  ||++|+|    +|.+|||+.|+|+       +++|+|++|+|+||..
T Consensus       115 ~~~~l~~Gv~m~~~~l~~~L~~~--Gv~~i~~----~G~~FDP~~HEAv~~~~~~~~~~~~Vv~v~qkGY~l  180 (197)
T PRK10325        115 DMSAMVEGIELTLKSMLDVVRKF--GVEVIAE----TNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL  180 (197)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHC--cCeeeCC----CCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEe
Confidence            57899999999999999999999  6689998    8999999999999       5789999999999964

>PRK14149 heat shock protein GrpE; Provisional

Probab=100.00  E-value=1.4e-35  Score=253.79  Aligned_cols=126  Identities=22%  Similarity=0.161  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHhHH
Q psy2067          81 KQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLY  160 (225)
Q Consensus        81 ~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~l~  160 (225)
                      +.++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+.+.+      ....+|+
T Consensus        43 ~~~~~l~~e~~elkd~~lR~~AefEN~rKR~~kE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~~------~~~~~l~  116 (191)
T PRK14149         43 EIKEDFELKYKEMHEKYLRVHADFENVKKRLERDKSMALEYAYEKIALDLLPVIDALLGALKSAAEV------DKESALT  116 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhccccc------cchHHHH
Confidence            4578889999999999999999999999999999999999999999999999999999999987642      3457899


Q ss_pred             HHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         161 EGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       161 ~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      +||+||+++|.++|+++  ||++|++    .| +|||+.|+||       .++|+|++|+|+||.+
T Consensus       117 ~Gv~mi~k~l~~vL~k~--GV~~I~~----~G-~FDP~~HEAv~~v~~~~~~~gtVv~V~QkGY~l  175 (191)
T PRK14149        117 KGLELTMEKLHEVLARH--GIEGIEC----LE-EFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKY  175 (191)
T ss_pred             HHHHHHHHHHHHHHHHC--CCEEeCC----CC-CCChHHhheeeeecCCCCCcCEEEEEeeCCcEe
Confidence            99999999999999999  6789987    57 5999999999       5689999999999975

>PRK14156 heat shock protein GrpE; Provisional

Probab=100.00  E-value=2.8e-34  Score=243.28  Aligned_cols=125  Identities=20%  Similarity=0.202  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHH
Q psy2067          78 DLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLK  157 (225)
Q Consensus        78 ~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~  157 (225)
                      .+.++++.+++++++++++|+|++|||+|||||+.||++++++||.++|+++||||+|||+||+.+...         ..
T Consensus        31 ~~~~~l~~l~~e~~elkd~~lR~~AEfeN~rKR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~---------~~  101 (177)
T PRK14156         31 PEKSELELANERADEFENKYLRAHAEMQNIQRRANEERQQLQRYRSQDLAKAILPSLDNLERALAVEGL---------TD  101 (177)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhCccc---------ch
Confidence            367888999999999999999999999999999999999999999999999999999999999987542         24


Q ss_pred             hHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc--------ccCCeeeeeecccchh
Q psy2067         158 SLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI--------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       158 ~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi--------~~~n~VveV~QkGY~~  219 (225)
                      +++.||+||+++|.++|+++  ||++|++    .  +|||+.|+|+        .++|+|++|+|+||..
T Consensus       102 ~l~~Gv~mi~k~l~~~L~~~--GV~~i~~----~--~FDP~~HEAv~~~~~~~~~~~gtVv~V~qkGY~l  163 (177)
T PRK14156        102 DVKKGLEMVQESLIQALKEE--GVEEVAV----D--SFDHNLHMAVQTLPADDEHPADSIAQVFQKGYKL  163 (177)
T ss_pred             hHHHHHHHHHHHHHHHHHHC--CCeecCC----C--CCChhHhhcceeecCCCCCCcCEEEEEeeCCcEe
Confidence            68999999999999999999  6688876    3  9999999999        3579999999999974

>PRK14157 heat shock protein GrpE; Provisional

Probab=100.00  E-value=5.3e-34  Score=249.22  Aligned_cols=123  Identities=14%  Similarity=0.088  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHH
Q psy2067          78 DLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLK  157 (225)
Q Consensus        78 ~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~  157 (225)
                      .+..++..+++++.+++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+..            
T Consensus        81 ~~~~~l~~le~e~~e~kd~llR~~AEfeNyRKR~~rE~e~~~~~a~~~~~~dLLpvlDnLeRAl~~~~------------  148 (227)
T PRK14157         81 DTLTPLGQAKKEAAEYLEALQRERAEFINYRNRTQKEQDRFRQHGIIDVLTALLPALDDIDRIREHSE------------  148 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhccc------------
Confidence            57788999999999999999999999999999999999999999999999999999999999998753            


Q ss_pred             hHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         158 SLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       158 ~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       +..||+||+++|.++|+++  ||++|+|    .|.+|||++|+||       .++|+|++|+|+||..
T Consensus       149 -~~~~~~~i~k~l~~vL~k~--GVe~I~~----~Ge~FDP~~HEAV~~~~~~~~~~gtVi~V~QkGY~l  210 (227)
T PRK14157        149 -MDDSFKAVAAKIDKAFEKF--GVEKFGE----KGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRI  210 (227)
T ss_pred             -cchHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhhhceeeeecCCCCCcCEEEEEeeCCcee
Confidence             3468999999999999999  7789998    8999999999999       4689999999999975

>PRK14142 heat shock protein GrpE; Provisional

Probab=99.98  E-value=3.2e-32  Score=237.21  Aligned_cols=119  Identities=16%  Similarity=0.059  Sum_probs=106.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHhHHHH
Q psy2067          83 IEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEG  162 (225)
Q Consensus        83 l~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~l~~G  162 (225)
                      .+.+.+++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+|||.+....      .      .+
T Consensus        42 ~~~~~~e~~elkdk~lR~~AEfEN~RKR~erE~e~~~~~A~e~~~kdLLpVlDnLERAL~~~~~~------~------~~  109 (223)
T PRK14142         42 AAHTEDKVAELTADLQRVQADFANYRKRALRDQQAAADRAKASVVSQLLGVLDDLERARKHGDLE------S------GP  109 (223)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHhHHHHHHhccccc------c------HH
Confidence            45567778899999999999999999999999999999999999999999999999999886532      0      35


Q ss_pred             HHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------c-cCCeeeeeecccchh
Q psy2067         163 LLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------F-LANFSVEWLQSPLAK  219 (225)
Q Consensus       163 vemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~-~~n~VveV~QkGY~~  219 (225)
                      |+||+++|+++|+++  ||++|++    +|++|||++|+||       . +.|+|++|+|+||.+
T Consensus       110 v~~I~kqL~~iLek~--GVe~I~~----~Ge~FDP~~HEAv~~ve~~e~~~~~tVveV~QkGYkL  168 (223)
T PRK14142        110 LKSVADKLDSALTGL--GLVAFGA----EGEDFDPVLHEAVQHEGDGGQGSKPVIGTVMRQGYQL  168 (223)
T ss_pred             HHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhhhceeeeecCCCCCCCCEEEEEecCCcEe
Confidence            899999999999999  7789988    8999999999999       1 247999999999975

>PRK14164 heat shock protein GrpE; Provisional

Probab=99.97  E-value=8.2e-32  Score=234.62  Aligned_cols=120  Identities=16%  Similarity=0.084  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHhHH
Q psy2067          81 KQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLY  160 (225)
Q Consensus        81 ~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~l~  160 (225)
                      .++..+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+...             .
T Consensus        77 ~~~~~le~el~el~d~llR~~AE~eN~RkR~~rE~e~~~~~a~~~~~~~LLpVlDnLerAl~~~~~-------------~  143 (218)
T PRK14164         77 GEASTVEAQLAERTEDLQRVTAEYANYRRRTERERQAIIETAKAGVATDLLPILDDLDLAEQHGDL-------------N  143 (218)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHhcccc-------------c
Confidence            668888999999999999999999999999999999999999999999999999999999987542             2


Q ss_pred             HH-HHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-----ccCCeeeeeecccchh
Q psy2067         161 EG-LLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-----FLANFSVEWLQSPLAK  219 (225)
Q Consensus       161 ~G-vemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-----~~~n~VveV~QkGY~~  219 (225)
                      .| ++||+++|.++|+++  ||++|++    +|++|||++|+||     -+.++|++|+|+||..
T Consensus       144 ~g~l~~i~~~l~~vL~k~--Gve~I~~----~Ge~FDP~~HEAV~~~~~~~~~~V~~V~qkGY~l  202 (218)
T PRK14164        144 EGPLKAFSDKLTNVLAGL--KVEKFGE----EGDAFDPEIHEAVQDLSSGDEKVLGTVLRKGYRM  202 (218)
T ss_pred             ccHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCChhHhheeeeecCCCCCEeeEEeeCCcEE
Confidence            34 789999999999999  7789998    8999999999999     2368999999999964

>KOG3003|consensus

Probab=99.97  E-value=5.3e-31  Score=229.87  Aligned_cols=138  Identities=34%  Similarity=0.452  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcc-cccCC
Q psy2067          74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKE-EVKDS  152 (225)
Q Consensus        74 ~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~-~~~~~  152 (225)
                      .+++.|.+.+...+++ .+|+|+|+|+.||++|+|+|+.|.+++++.||+++|++|||.|.|||++|+++++.+ +...+
T Consensus        71 ae~~~l~~~~k~~~e~-~eLkdk~~rs~Ad~eNlr~R~~r~~edak~FaiQ~f~kdLleVaD~Le~a~~~v~ee~~~~d~  149 (236)
T KOG3003|consen   71 AEKALLEKVLKLEKEE-QELKDKYLRSLAECENLRDRTIRDVEDAKKFAIQSFCKDLLEVADNLEKATECVKEESEKEDQ  149 (236)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccc
Confidence            3566666666555555 999999999999999999999999999999999999999999999999999999876 22345


Q ss_pred             ChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccch
Q psy2067         153 NPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLA  218 (225)
Q Consensus       153 ~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~  218 (225)
                      +..++.+++|+.||+++|.++|.+|  |+++.+|    +|++||||+|+|+       .++|||..|.++||.
T Consensus       150 ~~~L~~l~eGl~mte~ql~~vf~Kh--GLekldP----igekFDPn~HEAvfq~p~~~k~pgtV~~v~k~Gy~  216 (236)
T KOG3003|consen  150 KKDLKDLFEGLSMTEAQLKEVFAKH--GLEKLDP----IGEKFDPNEHEAVFQVPDAAKEPGTVALVTKKGYK  216 (236)
T ss_pred             chHHHHHHhHHHHHHHHHHHHHHHc--CceecCC----CCCCCCcchhheeEeccccCCCCCeEEEEeccCcc
Confidence            7789999999999999999999999  6699999    9999999999999       578999999999996

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=99.97  E-value=5.3e-30  Score=207.80  Aligned_cols=117  Identities=35%  Similarity=0.357  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccCCChhHHhHHHHHHHHHHHH
Q psy2067          91 SDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNL  170 (225)
Q Consensus        91 ~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~~~~~~~~l~~Gvemi~kqL  170 (225)
                      ++++++++|++|||+|||+|+.++++++++||.++|+++||||+|||+||+.+...+      +....+.+|++||+++|
T Consensus         2 ~~~~~~~~r~~ae~~N~rkr~~~e~~~~~~~~~~~~~~~ll~v~D~le~a~~~~~~~------~~~~~~~~g~~~i~~~l   75 (137)
T cd00446           2 EELKDKLLRALAEFENYRKRTEREREEARKYAIEKFAKDLLPVLDNLERALEAAKKE------EELKNLVEGVEMTLKQL   75 (137)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------chHHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999999987642      35689999999999999


Q ss_pred             HHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         171 KKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       171 ~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      .++|.++  ||++|.|    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus        76 ~~~L~~~--Gv~~i~~----~g~~FDp~~Heav~~~~~~~~~~~~I~~v~~~GY~~  125 (137)
T cd00446          76 LDVLEKH--GVEKIEP----EGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKL  125 (137)
T ss_pred             HHHHHHC--CCEEECC----CCCCCCHHHheeeeeecCCCCCcCEEEEEeecCeEE
Confidence            9999999  7789998    7899999999999       5789999999999974

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.96  E-value=2.6e-29  Score=207.61  Aligned_cols=137  Identities=30%  Similarity=0.342  Sum_probs=117.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCccccc
Q psy2067          71 KIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVK  150 (225)
Q Consensus        71 ~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~  150 (225)
                      ....++..++.+++.++++++++++++.|+.|+|+|||+|+.++.+++++++.++|+++||||+|+|+||+.+.+.    
T Consensus         8 ~~~~~~~~~~~~l~~l~~~~~~l~~~~~r~~ae~en~~~r~~~e~~~~~~~~~~~~~~~ll~v~D~l~~a~~~~~~----   83 (165)
T PF01025_consen    8 EEDEEIEELEEELEELEKEIEELKERLLRLQAEFENYRKRLEKEKEEAKKYALEKFLKDLLPVLDNLERALEAAKS----   83 (165)
T ss_dssp             CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC-SH----
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----
Confidence            3445667777888889999999999999999999999999999999999999999999999999999999998752    


Q ss_pred             CCChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         151 DSNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       151 ~~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                        ++...++..||.||+++|.++|+++  ||++|.|    .|.+|||+.|+|+       .++|+|++|+|+||..
T Consensus        84 --~~~~~~~~~g~~~~~~~l~~~L~~~--Gv~~i~~----~G~~FDp~~heav~~~~~~~~~~~~I~~v~~~GY~~  151 (165)
T PF01025_consen   84 --NEEEESLLEGLEMILKQLEDILEKN--GVEEIEP----VGEPFDPNLHEAVETVPDPDKEPGTIVEVVRPGYRL  151 (165)
T ss_dssp             --HCTCHHHHHHHHHHHHHHHHHHHTT--TEEEE------TSSB--TTTEEEEEEECSSSS-CTBEEEECC-EEEE
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHC--CCEecCC----CCCCCCHHHheeheecCcCCCCcCeEEEEEecCEEE
Confidence              2245689999999999999999999  7799999    7999999999999       5689999999999963

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PF06156 DUF972: Protein of unknown function (DUF972); InterPro: IPR010377 FUNCTION: Involved in initiation control of chromosome replication

Probab=91.59  E-value=0.41  Score=37.85  Aligned_cols=45  Identities=22%  Similarity=0.445  Sum_probs=37.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLE  116 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e  116 (225)
                      ++..+..+-+++..|+.++.++-+...++.-|.+++|+|+.+...
T Consensus        13 le~~l~~l~~~~~~LK~~~~~l~EEN~~L~~EN~~Lr~~l~~~~~   57 (107)
T PF06156_consen   13 LEQQLGQLLEELEELKKQLQELLEENARLRIENEHLRERLEELEQ   57 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            455667777888888888888888888999999999999987665

SUBUNIT: Interacts with both DnaA and DnaN, acting as a bridge between these two proteins. SIMILARITY: Belongs to the YabA family.

>PRK13169 DNA replication intiation control protein YabA; Reviewed

Probab=87.66  E-value=1.5  Score=34.99  Aligned_cols=43  Identities=21%  Similarity=0.395  Sum_probs=37.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQ  114 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE  114 (225)
                      ++..+..+-.++..|+.++.++-+...++.-|-+++|+|+.+.
T Consensus        13 le~~l~~l~~el~~LK~~~~el~EEN~~L~iEN~~Lr~~l~~~   55 (110)
T PRK13169         13 LEQNLGVLLKELGALKKQLAELLEENTALRLENDKLRERLEEL   55 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4556677888888999999999999999999999999999974

>COG4467 Regulator of replication initiation timing [Replication, recombination, and repair]

Probab=84.72  E-value=1.6  Score=34.91  Aligned_cols=68  Identities=16%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhHHhhHHHHh
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQ---SFCKDLLDIADTLSLAN  141 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie---~f~kdLLpViDnLERAL  141 (225)
                      ++..+-.+-+++..+++.+.++-+...+++-|.+++|+|+..  ....+.+..   .-.++..+..|||.|--
T Consensus        13 le~~l~~l~~el~~lK~~l~~lvEEN~~L~lENe~LR~RL~~--~~~e~~~~~k~~~~~~~~~~~~dnL~~lY   83 (114)
T COG4467          13 LEEQLGVLLAELGGLKQHLGSLVEENTALRLENEKLRERLGE--PTLEKTAVKKEKPAVKKKGEGYDNLARLY   83 (114)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhHHHHHHHhCC--ccccchhhhcccccccccCCCchhHHHHH
Confidence            455667778888889999999999999999999999999976  222222222   23455788888888764

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]

Probab=83.10  E-value=20  Score=32.25  Aligned_cols=19  Identities=5%  Similarity=-0.067  Sum_probs=10.8

Q ss_pred             HHHHHHhccc-CCCceEecc
Q psy2067         168 GNLKKHAHPV-EYPSVVIIP  186 (225)
Q Consensus       168 kqL~~vLek~-Gvgv~~I~p  186 (225)
                      ..+..+.... |+||+++..
T Consensus       178 ~~yeri~~~~kg~gvvpl~g  197 (239)
T COG1579         178 SEYERIRKNKKGVGVVPLEG  197 (239)
T ss_pred             HHHHHHHhcCCCceEEeecC
Confidence            3344444444 778788753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	225
4ani_A	213	Structural Basis For The Intermolecular Communicati		2e-05

>pdb|4ANI|A Chain A, Structural Basis For The Intermolecular Communication Between Dnak And Grpe In The Dnak Chaperone System From Geobacillus Kaustophilus Hta426 Length = 213

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 74  EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDI 133
           EEL   K QI  L  K S++  +Y R  AD EN R+R  +++E ++ Y  QS   DLL +
Sbjct: 59  EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPV 118
Query: 134 ADTLSLANESVPKEEVKDSNPHLKSLYEGLLMT 166
            D    A       +++  N   KS+ +G+ M 
Sbjct: 119 LDNFERAL------KIETDNEQAKSILQGMEMV 145

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	6e-21
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	9e-20
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	3e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1 Length = 197

 Score = 85.5 bits (212), Expect = 6e-21
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 5/136 (3%)

Query: 37  SKAENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDK 96
           S  E K  E ++ ++                   ++    E +      L E  +   D 
Sbjct: 2   SSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDG 61

Query: 97  YKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHL 156
             R  A+ EN R+R    +E++  + ++ F  +LL + D+L  A E   K      NP +
Sbjct: 62  ILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA-----NPDM 116

Query: 157 KSLYEGLLMTDGNLKK 172
            ++ E + +T  ++  
Sbjct: 117 SAMVEDIELTLKSMLD 132

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus} Length = 213

 Score = 82.9 bits (205), Expect = 9e-20
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 40  ENKKEESESKKDDSDSTASSSSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKR 99
           E    + E +        +     +         EEL   K QI  L  K S++  +Y R
Sbjct: 25  EEAAPQPEEESGGVPLEEAGGEEAAEPAEKAPTAEELAAAKAQIAELEAKLSEMEHRYLR 84

Query: 100 ALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSL 159
             AD EN R+R  +++E ++ Y  QS   DLL + D    A +     E        KS+
Sbjct: 85  LYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETDNE------QAKSI 138

Query: 160 YEGLLMTDGNLKK 172
            +G+ M   +L  
Sbjct: 139 LQGMEMVYRSLVD 151

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus} Length = 177

 Score = 72.7 bits (179), Expect = 3e-16
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 60  SSTESTSNVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESK 119
           +   +       + +E + L+++++A  E+   L DKY R LAD +N R+R  ++L+  +
Sbjct: 5   NHENTLEKDLEAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKARE 64

Query: 120 LYGIQSFCKDLLDIADTLSLANESVPKEEVKDSNPHLKSLYEGLLMTDGNLKK 172
             G+    + LL + D L  A E              +S+ +G+        +
Sbjct: 65  REGVLKALRALLPVLDDLDRALEFAEASP--------ESIRQGVRAIRDGFFR 109

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 2e-06
 Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 41/193 (21%)

Query: 67  NVDPKIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRF--NKQLEESKL---- 120
           N    + E L+ L  QI+      SD     K  +   +   +R   +K  E   L    
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 121 ----YGIQSF---CKDLL-----DIADTLSLANESVPKEEVKDSNPHLKSLYE----GLL 164
                   +F   CK LL      + D LS A  +    +      H  +L       LL
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD-----HHSMTLTPDEVKSLL 307

Query: 165 MTDGNLKKHAHPVE----YPSVV-IIPDSIAVM-------ERISLEQSLSIFLANFSVEW 212
           +   + +    P E     P  + II +SI          + ++ ++  +I  +  S+  
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES--SLNV 365

Query: 213 LQSPLAKDIFENL 225
           L+    + +F+ L
Sbjct: 366 LEPAEYRKMFDRL 378

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	100.0
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	100.0
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	100.0
3swy_A	46	Cyclic nucleotide-gated cation channel alpha-3; co	90.95
3swf_A	74	CGMP-gated cation channel alpha-1; coiled-coil, as	89.45
2v66_B	111	Nuclear distribution protein NUDE-like 1; structur	84.39
3he5_A	49	Synzip1; heterodimeric coiled-coil, de novo protei	82.67

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=100.00  E-value=2.1e-37  Score=267.74  Aligned_cols=136  Identities=29%  Similarity=0.295  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      ..++++.|..+++.+++++++++++|+|++|||+|||||+.||++++++||+++|+++||||+|||+||+.+++.     
T Consensus        57 ~~~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~-----  131 (213)
T 4ani_A           57 TAEELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALKIETD-----  131 (213)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCCSC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc-----
Confidence            346788899999999999999999999999999999999999999999999999999999999999999998764     


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       +....+|++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||       .++|+|++|+|+||..
T Consensus       132 -~~~~~~l~eGvemi~k~l~~~L~k~--Gv~~I~~----~Ge~FDP~~HeAv~~v~~~~~~~gtVv~V~qkGY~l  199 (213)
T 4ani_A          132 -NEQAKSILQGMEMVYRSLVDALKKE--GVEAIEA----VGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKL  199 (213)
T ss_dssp             -CSTHHHHHHHHHHHHHHHHHHHHHT--TEECCCC----SSSCCCTTTEEEEEEECCSSSCSSSEEEEEECCCEE
T ss_pred             -cccHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCHHHceeeeeecCCCCCCCcEEEEEeCCeEE
Confidence             3357899999999999999999999  7799998    8999999999999       5689999999999963

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=100.00  E-value=2.1e-36  Score=258.71  Aligned_cols=134  Identities=20%  Similarity=0.250  Sum_probs=114.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      +..+++.|++++++++.   +++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.+    
T Consensus        40 ~~~~~~~l~~~l~e~~~---~~~d~~lR~~Ae~eN~rkR~~ke~~~~~~~a~~~~~~~LLpv~DnlerAl~~~~~~----  112 (197)
T 1dkg_A           40 RDEKVANLEAQLAEAQT---RERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKA----  112 (197)
T ss_dssp             HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGHHHHSHHHHHHHHHHHHCC-------
T ss_pred             hHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhccc----
Confidence            34455555555555544   36789999999999999999999999999999999999999999999999987532    


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                       +..+++|++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||       +++|||++|+|+||..
T Consensus       113 -~~~~~~l~~Gv~~~~~~l~~~L~~~--Gv~~i~~----~G~~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l  180 (197)
T 1dkg_A          113 -NPDMSAMVEDIELTLKSMLDVVRKF--GVEVIAE----TNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL  180 (197)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHTTT--TEEEECC----CSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEE
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCHHHhheeeeecCCCCCcCeEEEEeeCCeee
Confidence             3356789999999999999999999  7799998    8999999999999       5789999999999964

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=100.00  E-value=6.6e-37  Score=258.12  Aligned_cols=134  Identities=20%  Similarity=0.199  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhHHHHhhcCCcccccC
Q psy2067          72 IKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGIQSFCKDLLDIADTLSLANESVPKEEVKD  151 (225)
Q Consensus        72 ~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~aie~f~kdLLpViDnLERAL~~~~~~~~~~  151 (225)
                      +..++..++++++.+++++++++++|+|++|||+|||||++||++++++||+++|+++||||+|||+||+.+.+.     
T Consensus        17 ~~~e~~~l~~~~~~l~~e~~e~~d~~lR~~Ae~eN~rkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~~~~~-----   91 (177)
T 3a6m_A           17 VGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAREREGVLKALRALLPVLDDLDRALEFAEA-----   91 (177)
T ss_dssp             THHHHSSTTTSTTGGGGTSSSHHHHHHTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGG-----
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhc-----
Confidence            445666677778888999999999999999999999999999999999999999999999999999999988642     


Q ss_pred             CChhHHhHHHHHHHHHHHHHHHhcccCCCceEeccCCCCCCCCCCccchhhc----ccCCeeeeeecccchh
Q psy2067         152 SNPHLKSLYEGLLMTDGNLKKHAHPVEYPSVVIIPDSIAVMERISLEQSLSI----FLANFSVEWLQSPLAK  219 (225)
Q Consensus       152 ~~~~~~~l~~Gvemi~kqL~~vLek~Gvgv~~I~p~~~~~g~~FDP~~heAi----~~~n~VveV~QkGY~~  219 (225)
                       +  .+++++||+||+++|.++|+++  ||++|+|    +|.+|||+.|+||    .++|||++|+|+||..
T Consensus        92 -~--~~~l~~Gv~m~~~~l~~~L~k~--Gv~~i~~----~Ge~FDP~~HeAv~~~~~~~gtVv~v~qkGY~l  154 (177)
T 3a6m_A           92 -S--PESIRQGVRAIRDGFFRILAGL--GVEEVPG----EGEAFDPRYHEAVGLLPGEPGKVAKVFQRGFRM  154 (177)
T ss_dssp             -C--HHHHHHHHHHHHHHHHHHHHHT--TCEECCC----TTSBCCTTTEEEEEEEESSTTBEEEEEECCEEE
T ss_pred             -c--HHHHHHHHHHHHHHHHHHHHHC--CCEEeCC----CCCCCCHHHhhhhhcccCCcCeEEEEeecCeee
Confidence             2  6789999999999999999999  7799998    8999999999999    2689999999999974

>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}

Probab=90.95  E-value=1.5  Score=28.86  Aligned_cols=42  Identities=19%  Similarity=0.394  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2067          78 DLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESK  119 (225)
Q Consensus        78 ~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~ak  119 (225)
                      .+++++..++.-++-+..++.|+.|||+....++.+-+...-
T Consensus         2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE   43 (46)
T 3swy_A            2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE   43 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            367788889999999999999999999999999888776543

>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}

Probab=89.45  E-value=3.2  Score=29.95  Aligned_cols=46  Identities=17%  Similarity=0.333  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2067          78 DLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKLYGI  123 (225)
Q Consensus        78 ~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk~ai  123 (225)
                      .++.++..++.-++-|+.++.|++|||+....++++-+.+.-.+-.
T Consensus         4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~   49 (74)
T 3swf_A            4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLK   49 (74)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3678888899999999999999999999999999888777665433

>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}

Probab=84.39  E-value=12  Score=28.75  Aligned_cols=71  Identities=15%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhHHhhHHHHhhcC
Q psy2067          74 EELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFNKQLEESKL--YGIQSFCKDLLDIADTLSLANESV  144 (225)
Q Consensus        74 ~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~KE~e~akk--~aie~f~kdLLpViDnLERAL~~~  144 (225)
                      .....|+.+...|.-+++.|+.+|.....+--+-.-.+++++...+.  -....-+++|=-.=|+|+|+-.+.
T Consensus         3 k~~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t   75 (111)
T 2v66_B            3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRAT   75 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence            35678999999999999999999999999988888888998887654  455666777777889999996664

>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}

Probab=82.67  E-value=4.2  Score=26.31  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=28.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2067          71 KIKEELEDLKKQIEALNEKNSDLLDKYKRALADGENARQRFN  112 (225)
Q Consensus        71 ~~~~~i~~L~~el~~leee~~elkdk~lR~~AEfEN~RkR~~  112 (225)
                      +++.++..|+.+-+.++++.-.-+|-..++..|+.|+|++.+
T Consensus         7 qlenevaslenenetlkkknlhkkdliaylekeianlrkkie   48 (49)
T 3he5_A            7 QLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE   48 (49)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence            344555666666666666655566777788889999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	98.68

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=98.68  E-value=2.7e-09  Score=73.19  Aligned_cols=35  Identities=11%  Similarity=-0.006  Sum_probs=30.8

Q ss_pred             ceEeccCCCCCCCCCCccchhhc-------ccCCeeeeeecccchh
Q psy2067         181 SVVIIPDSIAVMERISLEQSLSI-------FLANFSVEWLQSPLAK  219 (225)
Q Consensus       181 v~~I~p~~~~~g~~FDP~~heAi-------~~~n~VveV~QkGY~~  219 (225)
                      |+.|.+    .|++|||+.|+|+       .++|+|++|+|+||..
T Consensus         1 ve~i~~----~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~   42 (59)
T d1dkga1           1 VEVIAE----TNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTL   42 (59)
T ss_dssp             EEEECC----CSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEE
T ss_pred             CceeCC----CCCCCCHHHceEeeEecCCCCCCCEEEEEEeCCcEE
Confidence            356777    8999999999999       5789999999999974