Diaphorina citri psyllid: psy2137


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
ALELDSSDESSEISSINNGTSTTDNGHPGGTSKELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPPQGSAATPGVVNNNKLSTSGVVVLEIERSFDDYKFGHAFSTRLAMPRDELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISRSVGKFQESDREFIVESSSLLR
ccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccEEccccHHHHHHHcccccccEEEcccccHHHccccccccccccccHHHcccccccHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHcccccccccEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccCCcccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEccccccc
***********************************************LFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKEPRSFVVSLPSTFARALDC*************AAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNY******************LSTSGVVVLEIERSFDDYKFGHAFSTRLAMPRDELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYL*************DFETLVWTPHHSLTDKQIDQFLVISRSVGKFQESDRE**V*******
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ALELDSSDESSEISSINNGTSTTDNGHPGGTSKELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAVEAESKLKQVYIPNYNKPPQGSAATPGVVNNNKLSTSGVVVLEIERSFDDYKFGHAFSTRLAMPRDELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISRSVGKFQESDREFIVESSSLLR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Metastasis-associated protein MTA3 Plays a role in maintenance of the normal epithelial architecture through the repression of SNAI1 transcription in a histone deacetylase-dependent manner, and thus the regulation of E-cadherin levels.confidentA6QL72
Metastasis-associated protein MTA3 Plays a role in maintenance of the normal epithelial architecture through the repression of SNAI1 transcription in a histone deacetylase-dependent manner, and thus the regulation of E-cadherin levels.confidentQ9BTC8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmconfidentGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0033363 [BP]secretory granule organizationprobableGO:0006996, GO:0071840, GO:0009987, GO:0016043, GO:0044763, GO:0016050, GO:0008150, GO:0044699
GO:0001103 [MF]RNA polymerase II repressing transcription factor bindingprobableGO:0001085, GO:0008134, GO:0003674, GO:0005488, GO:0005515, GO:0070491
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0008284 [BP]positive regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0007165 [BP]signal transductionprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0023052, GO:0007154, GO:0050789, GO:0044699
GO:0019899 [MF]enzyme bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0006911 [BP]phagocytosis, engulfmentprobableGO:0009987, GO:0006909, GO:0016192, GO:0016044, GO:0071840, GO:0006810, GO:0010324, GO:0008150, GO:0061024, GO:0044765, GO:0044763, GO:0016043, GO:0006897, GO:0051234, GO:0051179, GO:0044699
GO:0008278 [CC]cohesin complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0000793, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0010971 [BP]positive regulation of G2/M transition of mitotic cell cycleprobableGO:0045931, GO:0090068, GO:0007346, GO:0045787, GO:0051726, GO:0010564, GO:0050794, GO:0050789, GO:1901987, GO:0065007, GO:1901990, GO:1901992, GO:0048518, GO:0008150, GO:0048522, GO:0010389, GO:1901989
GO:0003682 [MF]chromatin bindingprobableGO:0003674, GO:0005488
GO:0016581 [CC]NuRD complexprobableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0070603, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0017053, GO:0000118, GO:0090545, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XAG, chain B
Confidence level:very confident
Coverage over the Query: 161-205
View the alignment between query and template
View the model in PyMOL
Template: 2XAG, chain B
Confidence level:very confident
Coverage over the Query: 323-333
View the alignment between query and template
View the model in PyMOL
Template: 3SWR, chain A
Confidence level:probable
Coverage over the Query: 41-93
View the alignment between query and template
View the model in PyMOL