Diaphorina citri psyllid: psy2145


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------81
SGDVWSPPNPQDSSPYLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDIVSESLQPDAWKKIQLKEAEMNKPDAWKKIQLKEAEMNKVPEMFIDTRPQQAPVFTTHLENQHQLQEAQHVHLEA
cccccccccccccccEEEEEccccCEEECccccccccHHcccccccccccccccccccEEEEcccccEEEEEEEECccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEccEEEEEEEEEEEECcccccccccccccccHHHHcccccccccccccccccccccEEECccccEEEEccccEEEEEEEccccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEcccCEEEEEEEEEECcccccccccccccHHHHHHHHccccccccccccccccccEEEcccccEEEEccccEEEEEEEccccccccEEEEEEccEEccccccEEEEEEccEEEEEEccccccccCEEEEEEEEccCEEEEEEEEEEEccccccccccHHHHHccccccccccccccccCEEEEEEcccCEEEECcccEEEEccccEEEEcccccccccEEEEEccccccccccccccccccccCEECccccccEEEccccEEEEEEEECccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccEEEEEEEEEccEEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccEEECccccEEEcccccEEEEEEEccccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEccCEEEEEEEEEEECcccccccccccccccEEEEEEEEccccccccEEEEEEEccccccEEEEccccccccCEEEEEEccccccccccEEEEc
**DVWSP**************************************KNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGI*****************************ETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKS*****************************DTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVES**************************************************************TQ*********************************TKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTK*************************************IFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKS***************************************************PQQAPVFTTHLENQHQLQEAQHVHLEA
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SGDVWSPPNPQDSSPYLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKAxxxxxxxxxxxxxxxxxxxxxxxxxxxxEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDIVSESLQPDAWKKIQLKEAEMNKPDAWKKIQLKEAEMNKVPEMFIDTRPQQAPVFTTHLENQHQLQEAQHVHLEA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Titin Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.confidentQ9I7U4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030017 [CC]sarcomereprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0000794 [CC]condensed nuclear chromosomeprobableGO:0031974, GO:0043229, GO:0043228, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0005694, GO:0000793, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KLD, chain A
Confidence level:very confident
Coverage over the Query: 181-279,316-413,500-599,636-729
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Template: 3KLD, chain A
Confidence level:very confident
Coverage over the Query: 49-147,185-280,311-411,505-597
View the alignment between query and template
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Template: 3V2A, chain R
Confidence level:very confident
Coverage over the Query: 55-144,181-280
View the alignment between query and template
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Template: 1E07, chain A
Confidence level:very confident
Coverage over the Query: 13-145,183-230,242-279,314-419,432-601,637-682,694-731
View the alignment between query and template
View the model in PyMOL
Template: 2Y23, chain A
Confidence level:very confident
Coverage over the Query: 57-150,176-282,296-408
View the alignment between query and template
View the model in PyMOL
Template: 2Y23, chain A
Confidence level:very confident
Coverage over the Query: 324-414,428-431,500-615,629-729
View the alignment between query and template
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Template: 3QS9, chain E
Confidence level:very confident
Coverage over the Query: 192-276,320-354,372-412,506-605,636-762
View the alignment between query and template
View the model in PyMOL
Template: 1SY6, chain A
Confidence level:very confident
Coverage over the Query: 58-144,188-275
View the alignment between query and template
View the model in PyMOL