Diaphorina citri psyllid: psy2166

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-----
MVKATNSKGSATTSGTLKCLGQKDIYLETQHPMGAAGLEKVQEVEHALAGKYQRQPSGPEETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPSQTKLVYSLFEVPQPD
cEEEEcccCEEEEEEEEEEEcccccccccccccccccEEEEEEEEccccccCEECcccccccccccEEECcccccEEEcccccEEEEEEEEcccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEccCEEEEEEEEEEEcccccCCccccccccccccHHHHHHHHHccccccccccccccccEEEEcccccccccccccEEEEEEEECcccccCEEEEEEccEEccccccEEEEEEccEEEEEEccccccccEEEEEEEEEccCEEEEEEEEEEECccccccccCECccccCEEEEccccEEEEEEECcccccccEEEEEEccEEccccccEEEEEEccEEEEEEccccccccEEEEEEEEEcccEEEEEEEEEEEcccccccccccccccccccEEEEccccccCEEEEEccccccCEEEECccEEcccccEEEEEEEEECcccccEEEEEEEcccccccccEEEEECcccccccCECccccCEEEEcccEEEEEEEECcccccccEEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEccCEEEEEEEEEEEECccccccccccCEEEEEccEEccccccEEEEECccEEEEEEccccccccCEEEEEEEEccccCEEEEEEEEEEECccccccccccccccccccccccccccccCECcccccEEEEccccEEEEEEEECccccccEEEEEEccEEccccccEEEEEEccEEEEEEccccccccCEEEEEEEEccCEEEEEEEEEEECccccccccccccccccccc
MVKATNSKGSATTSGTLKCLGQKDIYLETQ********************************FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKE************************************DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQ****************QPVAQAAPVAEAPKFITQISDVTQL*****AHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLIL******************DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPSQTKLVYSL*E*****
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MVKATNSKGSATTSGTLKCLGQKDIYLETQHPMGAAGLEKVQEVEHALAGKYQRQPSGPEETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPSQTKLVYSLFEVPQPD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030017 [CC]sarcomereprobableGO:0005737, GO:0005575, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0030016, GO:0044424, GO:0044444, GO:0043228, GO:0043292, GO:0043226, GO:0044422, GO:0044449
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0000794 [CC]condensed nuclear chromosomeprobableGO:0031974, GO:0043229, GO:0043228, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0005694, GO:0000793, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DMK, chain A
Confidence level:very confident
Coverage over the Query: 35-162,204-250,261-399,496-663,691-787
View the alignment between query and template
View the model in PyMOL
Template: 3DMK, chain A
Confidence level:very confident
Coverage over the Query: 63-161,203-664,692-804
View the alignment between query and template
View the model in PyMOL
Template: 3B43, chain A
Confidence level:very confident
Coverage over the Query: 13-162,201-397,494-662
View the alignment between query and template
View the model in PyMOL
Template: 3RBS, chain A
Confidence level:very confident
Coverage over the Query: 68-165,179-295
View the alignment between query and template
View the model in PyMOL
Template: 1SY6, chain A
Confidence level:very confident
Coverage over the Query: 599-663,696-784
View the alignment between query and template
View the model in PyMOL