Diaphorina citri psyllid: psy2181

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
MKVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNSVNGPPTSTGT
cccccHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
MKVSSINRVLRN******************VYDKLRMFNGQPGWAWY*****************************************************************SFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR********************YDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN*****VYDKLRMFNG**********************************************VWF****************************************************************************************************************************************************
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MKVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNSVNGPPTSTGT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003705 [MF]RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityprobableGO:0003700, GO:0003674, GO:0001071, GO:0000981
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2CUE, chain A
Confidence level:very confident
Coverage over the Query: 105-170
View the alignment between query and template
View the model in PyMOL
Template: 2CUE, chain A
Confidence level:very confident
Coverage over the Query: 212-275
View the alignment between query and template
View the model in PyMOL
Template: 2NZZ, chain A
Confidence level:probable
Coverage over the Query: 338-357
View the alignment between query and template
View the model in PyMOL
Template: 4H0Y, chain A
Confidence level:probable
Coverage over the Query: 269-335
View the alignment between query and template
View the model in PyMOL