Diaphorina citri psyllid: psy2184

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MEELQCVVFSVMGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASGTALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINPVMSYEFLVSGGGTRSVSDTDDMQEEK
cccEEEEccccccccHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccHHHcHHccccccccccHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccc
MEELQCVVFSVMGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASGTALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINPVMSYEFLVSGGGTRSV**********
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MEELQCVVFSVMGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASGTALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINPVMSYEFLVSGGGTRSVSDTDDMQEEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ankyrin repeat and sterile alpha motif domain-containing protein 1B Isoform 2 may participate in the regulation of nucleoplasmic coilin protein interactions in neuronal and transformed cells.confidentQ8BIZ1
Ankyrin repeat and sterile alpha motif domain-containing protein 1B Isoform 3 can regulate global protein synthesis by altering nucleolar numbers.confidentP0C6S7
Ankyrin repeat and sterile alpha motif domain-containing protein 1B confidentA5PMU4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0009966 [BP]regulation of signal transductionprobableGO:0048583, GO:0050794, GO:0065007, GO:0023051, GO:0008150, GO:0010646, GO:0050789
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0048523 [BP]negative regulation of cellular processprobableGO:0008150, GO:0048519, GO:0065007, GO:0050789, GO:0050794
GO:0048522 [BP]positive regulation of cellular processprobableGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425
GO:0046875 [MF]ephrin receptor bindingprobableGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0005856 [CC]cytoskeletonprobableGO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0043005 [CC]neuron projectionprobableGO:0005575, GO:0097458, GO:0042995, GO:0044464, GO:0005623
GO:0080090 [BP]regulation of primary metabolic processprobableGO:0008150, GO:0065007, GO:0050789, GO:0019222
GO:0060255 [BP]regulation of macromolecule metabolic processprobableGO:0008150, GO:0065007, GO:0050789, GO:0019222
GO:0042383 [CC]sarcolemmaprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886
GO:0031323 [BP]regulation of cellular metabolic processprobableGO:0008150, GO:0065007, GO:0050789, GO:0019222, GO:0050794

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N0R, chain A
Confidence level:very confident
Coverage over the Query: 65-157,192-227
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Template: 2Y1L, chain E
Confidence level:very confident
Coverage over the Query: 65-157,192-257
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Template: 2Y1L, chain E
Confidence level:very confident
Coverage over the Query: 13-36,56-157,192-224
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Template: 2JAB, chain A
Confidence level:very confident
Coverage over the Query: 200-326
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Template: 2L6B, chain A
Confidence level:very confident
Coverage over the Query: 267-304,345-410
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Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 15-36,56-432
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Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 67-422,435-453
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Template: 3TWU, chain A
Confidence level:probable
Coverage over the Query: 15-141
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