Diaphorina citri psyllid: psy2211


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
GYPDLYEKFVLFYSRYVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPSGEI
ccccccccHHHHHHHHHHcccccccccccccccccEEEEEEccccccccEEEEcccEEEEEEcccccccccccccccHHHHHHHHHHHHccccccccccc
GYPDLYEKFVLFYSRYVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALC******
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GYPDLYEKFVLFYSRYVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPSGEI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Serine palmitoyltransferase 3 Component of the serine palmitoyltransferase (SPT) that catalyzes the first committed step in sphingolipid biosynthesis, which is the condensation of an acyl-CoA species and L-serine. The catalytic core is composed of a heterodimer of sptl-1 and sptl-2 or sptl-1 and sptl-3 (By similarity). Required for the specification of abicobasal polarity and development of the gut lumen.confidentQ9XVI6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0046520 [BP]sphingoid biosynthetic processprobableGO:0030148, GO:1901576, GO:0006629, GO:0044238, GO:1901564, GO:0006643, GO:1901566, GO:0071704, GO:0009987, GO:0044710, GO:0044237, GO:0044249, GO:0009058, GO:0006807, GO:0008150, GO:0008152, GO:0046519, GO:0046467, GO:0044255, GO:0006665, GO:0008610
GO:0017059 [CC]serine C-palmitoyltransferase complexprobableGO:0005783, GO:0005789, GO:0042175, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0044432, GO:0031211, GO:0012505, GO:0002178, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1FC4, chain A
Confidence level:confident
Coverage over the Query: 9-41,55-92
View the alignment between query and template
View the model in PyMOL
Template: 1C4K, chain A
Confidence level:probable
Coverage over the Query: 1-55
View the alignment between query and template
View the model in PyMOL