Diaphorina citri psyllid: psy2238

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQSVQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHACTCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQLNGDDYDDEDDDYDVGGGYSGFSYGGGGATNSRSHKFGRQQLNGDDYDDEDDDYDVGGGYSGFSYGGGGATN
cccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccEEcccccccccccccccccEEEcccccEEEEcccccCCcccHHHHHcccccccEEccccccccccccccccccccccccccCCcccccEEEEcccccccccccccHHHHHHHHHHccccccccccccccccccccHHHHcccHHHcccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*******************************AEFPCNANMECDKCKRKQKNRAFCYFCQSVQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHACTCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTK*****T*********************YDVGGGYSGFSYGGGGATNSR********************YDVGGGYSGFSY*******
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MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQSVQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHACTCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQLNGDDYDDEDDDYDVGGGYSGFSYGGGGATNSRSHKFGRQQLNGDDYDDEDDDYDVGGGYSGFSYGGGGATN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Zinc finger protein 330 very confidentQ922H9
Zinc finger protein 330 homolog very confidentQ9VAU9
Zinc finger protein 330 very confidentO70524

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000775 [CC]chromosome, centromeric regionconfidentGO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0043226, GO:0044422
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0030496 [CC]midbodyconfidentGO:0005575, GO:0044464, GO:0005623
GO:0008270 [MF]zinc ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I13, chain A
Confidence level:very confident
Coverage over the Query: 49-121,142-174,186-233
View the alignment between query and template
View the model in PyMOL