Diaphorina citri psyllid: psy2268


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTVS
cccccHHHccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHccHHHccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccEEEEEEEEcEEccccccEEEEEEEEEcccccccccEEEEEEEEEEEcccccccccEEEcccccccccccccEEEEEEEcccccEEECcccEEEEEEEcccccccccccEEEEcccc
MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGYVPPYEYDRDTKRTFRNFFGTESPFADLLN**********************************QVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV*
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MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DnaJ homolog subfamily B member 4 Probable chaperone.confidentQ5R8J8
DnaJ homolog subfamily B member 4 Probable chaperone.confidentQ9UDY4
DnaJ homolog subfamily B member 4 Probable chaperone.confidentQ9D832

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0080090 [BP]regulation of primary metabolic processprobableGO:0008150, GO:0065007, GO:0050789, GO:0019222
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0031323 [BP]regulation of cellular metabolic processprobableGO:0008150, GO:0065007, GO:0050789, GO:0019222, GO:0050794

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LZ8, chain A
Confidence level:very confident
Coverage over the Query: 138-260
View the alignment between query and template
View the model in PyMOL