Diaphorina citri psyllid: psy2272


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINDTVTFVEEGYDEDIEFGDEISDDEEGNAVDNLYLQMHMSKFPWFSIHFKLSFLKKVGTVSSIQEARPSYTLQYQNSAEVSYLCKGALLKKVLNSKNIAGGINKRFFKNRFARGNYNCQGLIVPKEDRIGKNQPFQENKNLKRVIRHLLAPKLDSSDTLHLDNWISEEYQLLSYRPEGRQDRKKPAIPREQKFRLEEQSVE
cccccEEEEEEccccEEEEEEccccccEEEEEcccEEEEEccccccccEEEEEEccHHHHHHHHHcccccccCEEcccccccccccccccccccccccccccccccccEEEcccccccEEEEEEcHHHHHHcccccHHccccccCEEEEccccHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccCEEEcccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccc
MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINDTVTFVEEGYDEDIEFGDEISDDEEGNAVDNLYLQMHMSKFPWFSIHFKLSFLKKVGTVSSIQEARPSYTLQYQNSAEVSYLCKGALLKKVLNSKNIAGGINKRFFKNRFARGNYNCQGLIVPKEDRIG********KNLKRVIRHLLAPKLDSSDTLHLDNWISEEYQLLS****************************
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MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINDTVTFVEEGYDEDIEFGDEISDDEEGNAVDNLYLQMHMSKFPWFSIHFKLSFLKKVGTVSSIQEARPSYTLQYQNSAEVSYLCKGALLKKVLNSKNIAGGINKRFFKNRFARGNYNCQGLIVPKEDRIGKNQPFQENKNLKRVIRHLLAPKLDSSDTLHLDNWISEEYQLLSYRPEGRQDRKKPAIPREQKFRLEEQSVE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Eukaryotic translation initiation factor 1A, Y-chromosomal Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.confidentQ6GVM3
Eukaryotic translation initiation factor 1A, Y-chromosomal Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.confidentO14602
Eukaryotic translation initiation factor 1A, X-chromosomal Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.confidentQ8BMJ3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0033592 [MF]RNA strand annealing activityprobableGO:0097159, GO:0003727, GO:0003725, GO:0003674, GO:0003723, GO:0003676, GO:1901363, GO:0005488
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0000022 [BP]mitotic spindle elongationprobableGO:0006996, GO:0044699, GO:0007017, GO:0007010, GO:0000278, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0000226, GO:0008150, GO:0007051, GO:0007052, GO:0022402, GO:0007049, GO:0044763, GO:0051231, GO:0016043
GO:0005840 [CC]ribosomeprobableGO:0005737, GO:0032991, GO:0043232, GO:0044464, GO:0043229, GO:0005623, GO:0030529, GO:0005575, GO:0044444, GO:0043228, GO:0044424, GO:0005622, GO:0043226
GO:0007224 [BP]smoothened signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0050789, GO:0044699
GO:0003743 [MF]translation initiation factor activityprobableGO:0097159, GO:0008135, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0006911 [BP]phagocytosis, engulfmentprobableGO:0009987, GO:0006909, GO:0016192, GO:0016044, GO:0071840, GO:0006810, GO:0010324, GO:0008150, GO:0061024, GO:0044765, GO:0044763, GO:0016043, GO:0006897, GO:0051234, GO:0051179, GO:0044699
GO:0006413 [BP]translational initiationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0044763, GO:0034645, GO:1901576, GO:0008150, GO:0006412, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1D7Q, chain A
Confidence level:very confident
Coverage over the Query: 1-84
View the alignment between query and template
View the model in PyMOL