Diaphorina citri psyllid: psy2274

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----

MHLVCAQQIPNCNKTMQVKSCNIISQYSSGSSGQNGVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTLYRFLTRRTNSKFNKIILKRLFMSKINSISERELDVKPTNTLALLPVFPTVTRKLTSDLKAASLNGHEDEEPARDTR

cccccccccccccccccccccccccccccccccccCEEccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHHccccccccEEEEEcEECcccccEEcccEEEEEEcccHHHHHHHHHHccEEcccHHHHccccccEEEEEEcccccHHHHHHHHHHHcccccHHHHHHcccccccccEEEECcccccccccccccccccccccccccccccc

**LVCAQQIPNCNKTMQVKSCNIISQY********GVDIC*KYDRRVRRT**KSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTLYRFLTRRTNSKFNKIILKRLFMSKINSISERELDVKPTNTLALLPVFPTVTRKLTSDLKAAS**************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
60S ribosomal protein L18		confident	Q0PXY6
60S ribosomal protein L18		confident	Q9VS34
60S ribosomal protein L18		confident	P69091

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0022625 [CC]	cytosolic large ribosomal subunit	probable	GO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0005840, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0043226, GO:0044424, GO:0015934, GO:0043228, GO:0030529, GO:0032991, GO:0044422
GO:0005774 [CC]	vacuolar membrane	probable	GO:0005737, GO:0005575, GO:0031090, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0003674 [MF]	molecular_function	probable
GO:0005886 [CC]	plasma membrane	probable	GO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0009506 [CC]	plasmodesma	probable	GO:0055044, GO:0005575, GO:0030054, GO:0005911
GO:0009507 [CC]	chloroplast	probable	GO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006412 [BP]	translation	probable	GO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZKR, chain o
Confidence level:very confident
Coverage over the Query: 54-165
View the alignment between query and template
View the model in PyMOL

Template: 2ZKR, chain o
Confidence level:very confident
Coverage over the Query: 166-221
View the alignment between query and template
View the model in PyMOL