Diaphorina citri psyllid: psy2378

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950------

MNMINSKYNKRKISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINLDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISASDRAHTIKVASSKKAKPSDIVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQANSRILTKGEIIIFINHKNKSLVNLIKNKTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLKNNYYKNYEISAYSKTGYESQHNLNYWKFGDYLGNSIAKSKKIEKKCLIFEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQIFLNN

cccccccccccccEEccccccccHHHHHHHHHHcccccEEEcccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHcccccccccccccccHcccccccEEccccccHHHHHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHccccEEEEEHHHHHHcccccccccccccccHHHHHHHHHcccccEEEEccccccHHHHHHHcccccEEEEcHHHcccccccHHHHHHHcccccccccccHHHHHHcccHHHHccccccccccccccccHHHHHHHHHHHHccccccHHHHHHccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccccccccEEECcccccccccHHHHcccccccEEEEEEcccccHHHHHHHHHccccccccccHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEHHHHHcccccEEEccEEEEEEEcccHHHHHHHHcccccHHHHHHHHHcHHHHHcccccHHHHHHHHHHHcccccccccEEEEEEHHHHcccccccccccEEEEcccccccccEEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccHHHHHHHHHHHHHHcccccccEEEEcccccccHHHcccHHHHccccEEEEEEccccHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHcccccccccCEEccHHHHHHHHHHHHHHHcc

************ISIAPMMNLTDRHCRMFHRQITRYSWLYTEMFTTQAILGNKKHCLDFNAEEHPIAFQVGDNEPKKLAKSAKIIQKWGYDEINLNCGCPSNRVQNGFFGAILMTKPLLVSDCIKAMRDSVEIDITVKHRIGIDDINSYDFVRDFVGTVSSAGCRTFIVHARNAFLKKLNPKQNRKIPILKYNFVYNLKKDFPELEIIINGGIKTKKEIDLHLNYIDGVMLGREAYKNPFLMSNFDLNYYSNLPQYKIPTRIDIINLDSENRENEGDIILSSDFVTPNAINFMSKYARGLICMTLTEKHCIQLKLDMMTKKNNSSFGTNFTVSIEAANGVTTGISAS******************IVQPGHIFPLQAKKGGVLIRGGHTEAGCDLTKLAGLTPSAVICEILNDDGTMARAQEKNILHISVPGALEIPLALKNIIQIKKFNVLIAIGVIIRGETYHFELIANETISNIMQISIKNNIPIINAILTTETIEQANSRILTKGEIIIFINHKNKSLVNLIKNKTPRHRAREFALQGIYQWLFNNMDVNLIETYIKEISNFYKVDKKYFYLILRGVINDINFLRYDLSLIIDRSINELSSIEYVVLLIGTYELKSHYKIPYKVIINEAIELVKSFGNIDEKKYLEALLIDVELSLPIILNRKIHTIFIGGGTPSLISDTGLDYLLKNIKKLLLFKKNISITLEANPSTFEIEKFHSYSIIGINRLSIGIQSFNNKYLNILGRTHDSKQAKYAIEIAKQYFNNFNLDLIYALPNQTLSELMLDLNYAIQYSPPHLSLYSLTIEPNTYFFKYPPLSMPSNDENAVMQDKITSLLKNNYYKNYEISAYSKTGYESQHNLNYWKFGDYLGNSIAKSKKIEKKCLIFEFMLNALRLKDGFSPNLFFERTGINIKIIESKLKNAEKLGLLKRNNKNIKPTSFGRYFLNDLQQIFLNN

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
tRNA-dihydrouridine synthase A	Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.	confident	Q8ZKH4
tRNA-dihydrouridine synthase A	Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.	confident	Q87L85
tRNA-dihydrouridine synthase A	Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.	confident	Q9I048

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003824 [MF]	catalytic activity	probable	GO:0003674
GO:0000287 [MF]	magnesium ion binding	probable	GO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0005739 [CC]	mitochondrion	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005634 [CC]	nucleus	probable	GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1G57, chain A
Confidence level:very confident
Coverage over the Query: 273-437
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Template: 3B0P, chain A
Confidence level:very confident
Coverage over the Query: 9-175,187-320
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View the model in PyMOL

Template: 1OLT, chain A
Confidence level:very confident
Coverage over the Query: 622-955
View the alignment between query and template
View the model in PyMOL

Template: 3D3B, chain A
Confidence level:very confident
Coverage over the Query: 529-659
View the alignment between query and template
View the model in PyMOL

Template: 1C41, chain A
Confidence level:very confident
Coverage over the Query: 414-530
View the alignment between query and template
View the model in PyMOL