Diaphorina citri psyllid: psy2416

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
MGSHKPESLKAPPKPYGKIALSLSNCLLPEEKLNPTPSMLDGLDPEVETDLRIIGCELIQTAGILLKLPQVAMATGQVLFQRFYYSKSFVRHPMETTAMGCVCLASKIEEAPRRIRDVINVFHHIRQVMNQKSITPMLLTTQYMTLKTQVIKAERRVLKELGFCVHVKHPHKIIVTYLQVLGCEKNQKLMQLANYMNDSLRTDVFVRYDPETIASACIYLTARKLRIPLPRNPAWYSLFHVLESDIQDVCKRILRLYTRPKANTDELERQIEVIKKEYQLSKDRKVLVSGDNTPTSNASPNIKSPSRHNNHKRKSRSRSRTRSPVTSKSRSRSRSPQPPKHKKSKKYSSRARSRSKSPRSRSRTPDRKYKKSHKSHKDSKDYYTPPSPDRSPYSSHSRSHSRKSS
cccccccccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHHccccccccccccEEEcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
******************IALSLSNCLLPEEKLNP*******LDPEVETDLRIIGCELIQTAGILLKLPQVAMATGQVLFQRFYYSKSFVRHPMETTAMGCVCLASKIEEAPRRIRDVINVFHHIRQVMNQKSITPMLLTTQYMTLKTQVIKAERRVLKELGFCVHVKHPHKIIVTYLQVLGCEKNQKLMQLANYMNDSLRTDVFVRYDPETIASACIYLTARKLRIPLPRNPAWYSLFHVLESDIQDVCKRILRLYTRPKANTDELERQIEVIK**********************************************************************************************************************************
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MGSHKPESLKAPPKPYGKIALSLSNCLLPEEKLNPTPSMLDGLDPEVETDLRIIGCELIQTAGILLKLPQVAMATGQVLFQRFYYSKSFVRHPMETTAMGCVCLASKIEEAPRRIRDVINVFHHIRQVMNQKSITPMLLTTQYMTLKTQVIKAERRVLKELGFCVHVKHPHKIIVTYLQVLGCEKNQKLMQLANYMNDSLRTDVFVRYDPETIASACIYLTARKLRIPLPRNPAWYSLFHVLESDIQDVCKRILRLYTRPKANxxxxxxxxxxxxxxxxxxxxxKVLVSGDNTPTSNASPNIKSPSRHNNHKRKSRSRSRTRSPVTSKSRSRSRSPQPPKHKKSKKYSSRARSRSKSPRSRSRTPDRKYKKSHKSHKDSKDYYTPPSPDRSPYSSHSRSHSRKSS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cyclin-L2 Transcriptional regulator which participates in regulating the pre-mRNA splicing process. Also modulates the expression of critical apoptotic factor, leading to cell apoptosis.confidentQ5I0H5
Cyclin-L2 Transcriptional regulator which participates in regulating the pre-mRNA splicing process. Also modulates the expression of critical apoptotic factor, leading to cell apoptosis.confidentQ9JJA7
Cyclin-L2 Transcriptional regulator which participates in regulating the pre-mRNA splicing process. Also modulates the expression of critical apoptotic factor, leading to cell apoptosis.confidentQ96S94

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016607 [CC]nuclear speckprobableGO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422
GO:0006396 [BP]RNA processingprobableGO:0016070, GO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483
GO:0019901 [MF]protein kinase bindingprobableGO:0019900, GO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0000079 [BP]regulation of cyclin-dependent protein serine/threonine kinase activityprobableGO:0019220, GO:0080090, GO:0019222, GO:0031323, GO:0071900, GO:0050789, GO:0043549, GO:0051246, GO:0065007, GO:0031399, GO:0065009, GO:0045859, GO:0060255, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0042325, GO:0032268, GO:0051726, GO:0051338, GO:0001932

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PK2, chain A
Confidence level:very confident
Coverage over the Query: 22-262
View the alignment between query and template
View the model in PyMOL
Template: 2B9R, chain A
Confidence level:very confident
Coverage over the Query: 25-122,140-288
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3pgw, chain Sprobable Alignment | Template Structure