Diaphorina citri psyllid: psy2461

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
WIAWTSAPVVYLVIFQHLRPGHAKRTDQNLRQHYQEVESHLPPFLHRIKKVRGRRPFRKHARRLRSSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLKKNRVNFFLATRTVEKHSPHPNAHPKSPKPKKPIYKIKPIGGEKNGKERKVLIRKPKAYYPTKDKIKKVRGRRPFRKHARRLRSSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLVTGPFALNAMPLRRVHQNYVIATSTQLDISGVKVPEAANDHFFRRIKKHNKQPRKGDKRSLFAKRKKRAYKVSKARKVMQKDMDEQLLKVIKVHPEKKILLSYPPWGWINTRDFNQKKLSVSPLDTSANGKISPASSLPPSLMSRGGKLCSPDAKQGPGGPPGMMSINEQIESMISRSTPNMYEQQAWKLRRALQQKEEEAHRKQSSPGAGGRYYGDPVPISPLDYVKNRIAEVMRTSEEDKGSEGLE
cccccccccccEEEEEECccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEcccccEEEEcccEEEEEcccEECcccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEccEEcccEEEEEEEcccccEEEEccccccccccccccccEEEEcEEEEEcccccccccccHHHHHHHHHHccccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccccccccccc
*IAWTSAPVVYLVIFQHLRPGHAKRTDQNLRQHYQEVESHLPPFLHRI*K*R*************SSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLKKNRVNFFLATRTVEKHSPHP********************************RKPKAYYPT*********************SSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLVTGPFALNAMPLRRVHQNYVIATSTQLDISGVKVPEAANDHFFR************************************KDMDEQLLKVIKVHPEKKILLSYPPWGWINTRDFNQKKLSV***********************************************EQIESMISRSTPNMYEQQA***************************YGDPVPISPLDYVKNRIAE***************
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WIAWTSAPVVYLVIFQHLRPGHAKRTDQNLRQHYQEVESHLPPFLHRIKKVRGRRPFRKHARRLRSSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLKKNRVNFFLATRTVEKHSPHPNAHPKSPKPKKPIYKIKPIGGEKNGKERKVLIRKPKAYYPTKDKIKKVRGRRPFRKHARRLRSSLKPGTIVILVAGVHKGKRGVFLKQLESGLLLVTGPFALNAMPLRRVHQNYVIATSTQLDISGVKVPEAANDHFFRRIKKHNKQPRKGDKRSLFAKRKKRAYKVSKARKVMQKDMDEQLLKVIKVHPEKKILLSYPPWGWINTRDFNQKKLSVSPLDTSANGKISPASSLPPSLMSRGGKLCSPDAKQGPGGPPGMMSINEQIESMISRSTPNMYEQQAWKLRRALQQKEEEAHRKQSSPGAGGRYYGDPVPISPLDYVKNRIAEVMRTSEEDKGSEGLE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S ribosomal protein L6 confidentQ58DQ3
60S ribosomal protein L6 confidentQ2YGT9
60S ribosomal protein L6 confidentP21533

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022625 [CC]cytosolic large ribosomal subunitprobableGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0005840, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0043226, GO:0044424, GO:0015934, GO:0043228, GO:0030529, GO:0032991, GO:0044422
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0009987 [BP]cellular processprobableGO:0008150
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A18, chain E
Confidence level:very confident
Coverage over the Query: 151-334
View the alignment between query and template
View the model in PyMOL
Template: 3IZR, chain G
Confidence level:confident
Coverage over the Query: 157-315
View the alignment between query and template
View the model in PyMOL
Template: 4A18, chain E
Confidence level:confident
Coverage over the Query: 38-116
View the alignment between query and template
View the model in PyMOL