Diaphorina citri psyllid: psy2470


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------86
MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFPDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLEG
ccccEEEEEccccccccCEEEEEccHHcHHHHcccccccccccEEEEccHHHHHcccccccccEEccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccHHHHHHHHcccccccccEEEEEEcccccccccccccccccccccHccccccccHHHHHHHHHcccccccHHHHHHcccccccccHHHHccccccccccHHHcccccccccccccccEEEEcccEEEEHHHHHHHHHHcccccccEEccccCEEEEccccccccEEEEcccccHccccccccccccccccEECccccccHHHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHcccccccccEEECccccccccEEEcccccccHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHcccccccccccEEEEEEcccccccccccEEEEEcccccccccccccccccEEEEcccHHHHHHcccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccCEEccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEcccCEEEEccccccccccccEEEEEcc
MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFPDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLEG
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTEGILIENDDHDPSVEKYSVIMLDKVHERTIFTDILMECSRKFSRLYTEASFSQLNECTPPEMQRTELSSAVLQLKALGIHNILRFSFPSPPPAQNLRVALELLYSLGAMDVNGNLTKPVGETMAEMPLHPIHAKVLLSSGSVLDSAVEILLHRLRGLCDNVDSGPETFHDHEMCFSIRGNQTQPLLLRVRRALDFPDMPYQLRYIGQPEMGPLLLRVRRALDFPDMPYQLRYIGQPEMGVGDKARPTIVRSSIDVACSCTVVEFLTEMGCRMDFEYISRGYMFRKGRMKILVSKIFKMSQGKPSDSGVEPISQSYLVELSILAPGGQDVIGEDMKAFAEQLKPLKRTQLKLIISSATVDAEEICQFYNISASSNATILSVKGHLYPVSVYYSNDPVVNYVQGVVDTAIKIHESMPVGDILAFVIGLEQIEHIIGILKQYHNQREDLKLLILPMHGSLPNNEQIKVFRPTPRAMRKIVIATNIAETSITIPGIVYVIDPGFVKARWFNPNTLTNSLVVVPISKASAVQRAGRAGRVRSGHVYRKNFMYNRLFIHFCVSRNIPTIPNDPKDVKCDVMFHKVFFSFFQYLLEAGWCYDTKLIGITEPRRISVTSLANRVSEELRTTLGHTVGYTIRFDDCTTEDVTKIKYMTEGILMREMMTDPLLRKYSVIMLDEVHERTIFTDILMGLLKKILKDKERDFECSDEIASILSLLQVQDIFIKPSSGALSLKARVLRRNFEVEQGDLLTLLNIFKFYEKQENKKQFCHKYFFNYKVLKRAAELKNQMILLLKKSSIPLVTSPRNTNAVLKCLTNGFFSNAAYLHYSGVYRTVRGNEDLYIHPSSVLYTLQQPQCTHLEG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mediator of RNA polymerase II transcription subunit 18 Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.confidentQ7QGX9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016592 [CC]mediator complexprobableGO:0043234, GO:0044446, GO:0032991, GO:0005575, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XAU, chain A
Confidence level:very confident
Coverage over the Query: 206-577,593-668,693-858
View the alignment between query and template
View the model in PyMOL
Template: 2XAU, chain A
Confidence level:very confident
Coverage over the Query: 40-174
View the alignment between query and template
View the model in PyMOL
Template: 3LLM, chain A
Confidence level:very confident
Coverage over the Query: 625-695
View the alignment between query and template
View the model in PyMOL
Template: 2ZJ8, chain A
Confidence level:confident
Coverage over the Query: 206-668,693-818
View the alignment between query and template
View the model in PyMOL
Template: 2DB3, chain A
Confidence level:confident
Coverage over the Query: 162-183,204-509,520-546
View the alignment between query and template
View the model in PyMOL
Template: 3C0T, chain A
Confidence level:confident
Coverage over the Query: 137-202,225-348
View the alignment between query and template
View the model in PyMOL