Diaphorina citri psyllid: psy2640

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610---
YIISYKKDGPTDTKIKSCLDFIERHNHLYNVAEIEERRCYLVDIKVLMNDQIFNDQWKTFLQNLSNEPQHTINCLGLAMHHYIISVYVCGNTSTTSGLTVTLSREGGGDFALEAGALVLADQGVCCIDEFDKMSAQHQNGMLYTAKAMRGITSRQYTPAFITMSIHPVMGEKRHTMSAQHQALLEAMEQQSISIAKASVVCSLPARTSVIAAANPVGGHYNRAKTVAENLRMGQALLSRFDLVFILLDNPDEHLDTLLSEHVMASLSGFQSNRNPSHSTQSFTENPNSVQSDIPLSERLKPGPGEELPLIPAPLLHKYLAYARKYVSKPELSTEAALLLQEFYLNLRKHHHSVDATPVTTRQLESLVRLTQDIQAEPNLFKLLVNSLCPSIFGHEMVKAGLLLALFGGCHSTNGSRGDAHVLIVGDPGLGKSQMLHACCAAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSARAKCELREEASKQDAQDVIDIMKWSLIDTSLNGGGGIDFTRSQH
ccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccEEEEccccccccccEEEEEEcccccEEEEccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEcccEEEEcccHHHHHHccccccccccccccHHHHcccccccccccEEEEEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHccccccHHHHHHHHHHccccEEEEccccccEEccccHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccccccccc
YIISYK*DGPTDTKIKSCLDFIERHNHLYNVAEIEERRCYLVDIKVLMNDQIFNDQWKTFLQNLSNEPQHTINCLGLAMHHYIISVYVCGNTSTTSGLTVTLSREGGGDFALEAGALVLADQGVCCIDEFDKMSAQHQNGMLYTAKAMRGITSRQYTPAFITMSIHPVMGEKRHTMSAQHQALLEAMEQQSISIAKASVVCSLPARTSVIAAANPVGGHYNRAKTVAENLRMGQALLSRFDLVFILLDNPDEHLDTLLSEHVMASL*****************************************PLIPAPLLHKYLAYARKYVSKPELSTEAALLLQEFYLNLRKHHHSVDATPVTTRQLESLVRLTQDIQAEPNLFKLLVNSLCPSIFGHEMVKAGLLLALFGGCHSTNGSRGDAHVLIVGDPGLGKSQMLHACCAAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSARAKCELREEASKQDAQDVIDIMKWSLIDTSLNGGGGI*******
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YIISYKKDGPTDTKIKSCLDFIERHNHLYNVAEIEERRCYLVDIKVLMNDQIFNDQWKTFLQNLSNEPQHTINCLGLAMHHYIISVYVCGNTSTTSGLTVTLSREGGGDFALEAGALVLADQGVCCIDEFDKMSAQHQNGMLYTAKAMRGITSRQYTPAFITMSIHPVMGEKRHTMSAQHQALLEAMEQQSISIAKASVVCSLPARTSVIAAANPVGGHYNRAKTVAENLRMGQALLSRFDLVFILLDNPDEHLDTLLSEHVMASLSGFQSNRNPSHSTQSFTENPNSVQSDIPLSERLKPGPGEELPLIPAPLLHKYLAYARKYVSKPELSTEAALLLQEFYLNLRKHHHSVDATPVTTRQLESLVRLTQDIQAEPNLFKLLVNSLCPSIFGHEMVKAGLLLALFGGCHSTNGSRGDAHVLIVGDPGLGKSQMLHACCAAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSAKKFISVLQKKAEVQSRSVFTVTELKQLATSANISVDNFFTFLTSLNDQGFLLKKGKQLYQLMSARAKCELREEASKQDAQDVIDIMKWSLIDTSLNGGGGIDFTRSQH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0097362 [CC]MCM8-MCM9 complexprobableGO:0043234, GO:0005575, GO:0042555, GO:0032991
GO:0000724 [BP]double-strand break repair via homologous recombinationprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0051716, GO:0006302, GO:0000725, GO:0071704, GO:0044699, GO:0006281, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0006310, GO:0044238, GO:0044260, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3F9V, chain A
Confidence level:very confident
Coverage over the Query: 9-135,178-269,305-398
View the alignment between query and template
View the model in PyMOL
Template: 3F9V, chain A
Confidence level:very confident
Coverage over the Query: 355-597
View the alignment between query and template
View the model in PyMOL
Template: 1LTL, chain A
Confidence level:probable
Coverage over the Query: 12-106,126-180
View the alignment between query and template
View the model in PyMOL