Diaphorina citri psyllid: psy269

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MDPLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR
ccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccEEEEEccccccccEEEEEEEEEEccCEEEEEEEEECcccccccccccccccccccccccEEEEccccccccccEEEEEEEccccEEEEEEcccccCEEECcccccccEEEEEEEcccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccEECccccccEEEcccccEEEEcccccccEEEEEccccccccEEEEEEEEEccccccEEEEEEECccccccccccccccccccc
*******************************LPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRA*********************************IVNSMAAMNVHPQSTPAPL**************QDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLL******
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MDPLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0004842 [MF]ubiquitin-protein ligase activityprobableGO:0019787, GO:0016879, GO:0016881, GO:0003824, GO:0003674, GO:0016874
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YUE, chain A
Confidence level:very confident
Coverage over the Query: 30-190
View the alignment between query and template
View the model in PyMOL
Template: 2YUE, chain A
Confidence level:very confident
Coverage over the Query: 259-341
View the alignment between query and template
View the model in PyMOL