Psyllid ID: psy269

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
MDPLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEccccccEEEEEccccccccEEEEEEEEEEccEEEEEEEEEEEcccccccccccccccccccccccEEEEccccccccccEEEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEEcccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccEEEccccccEEEcccccEEEEcccccccEEEEEccccccccEEEEEEEEEccccccEEEEEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccEEccccccEEEEEcccEEEEEEcccccEEEEEccccccccEEEEEEEEEcccccEEEEEEEEcccHHHcccccccccccccccccccEEEEccHcccccccEEEEEEccccEEEEEEccccccEEEccccccccEEEEEEEEccEEEEEEEccccccccccccccccccccccccccccccHccccccccccHccccccccccccccccccccccccccccccccccEEccccccEEEEEcccEEEEEEccccccEEEEEccccccccEEEEEEEEEccccccEEEEEEEcccHHHcccccccccccccc
Coil and Loop (DISEMBL)
mdplnfpstnrprffscvtaprtgsnsgtnnlpplyfhqvhgenvrvsrdGTVAKRYESFCkgvafssrpvkinEKVYVKLLEISTnwsgvirfgftandpahlkyalpryvcpdltnkpgYWAKALAERFADQETVLFYYVTAagdvhfgingeekgvfftgvetrgplwAMFDIYGNSTAIQLIDSRAQLNNArrvsthlspeelsspinnnsnidLMNRYIVNSMAamnvhpqstpaplpedtqvplraltspqdlvplpfhrtigrnvrlsndrtiasrrdtefsqgyvftgrpvqlgEKIVIQVLETESRYYGALALGltscnpaslkpSVFLLSSISGR
Flexible Loop (DISEMBL)
mdplnfpstnrprffsCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFckgvafssrpvkinEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSthlspeelsspinnnsnIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTspqdlvplpfhrtigrnvrlsndrtiasrrdtefsqgyvftgrpvqlgeKIVIQVLETESRYYGALALGltscnpaslkPSVFLLSSISGR
Low Complexity Region (SEG)
MDPLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR
Disordered region (IsUnstruct)
**************FSCV*************LPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR***************************IDLMNRYIVNS*******************************LVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLL******
Disordered Region (DISOPRED)
***********************************YFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRA*********************************IVNSMAAMNVHPQSTPAPL**************QDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLL******
Disordered Region (DISEMBL)
********TNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR
Disordered Region (DISPRO)
*******************A*********NNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR*********************************************************************LVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFL*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDPLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSISGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
Q24746	747	Protein neuralized OS=Dro	N/A	N/A	0.884	0.408	0.479	6e-91
P29503	754	Protein neuralized OS=Dro	yes	N/A	0.889	0.407	0.468	7e-91
Q0MW30	546	E3 ubiquitin-protein liga	yes	N/A	0.869	0.549	0.366	2e-48
A8MQ27	555	E3 ubiquitin-protein liga	yes	N/A	0.820	0.509	0.347	9e-48
Q923S6	574	Neuralized-like protein 1	no	N/A	0.913	0.548	0.327	4e-45
O76050	574	Neuralized-like protein 1	no	N/A	0.857	0.515	0.329	6e-44
Q96EH8	262	E3 ubiquitin-protein liga	no	N/A	0.452	0.595	0.354	6e-23
Q8CJC5	254	E3 ubiquitin-protein liga	no	N/A	0.539	0.732	0.336	8e-21
Q5M870	254	E3 ubiquitin-protein liga	no	N/A	0.530	0.720	0.336	2e-20
A1L0Y2	1477	Neuralized-like protein 4	no	N/A	0.713	0.166	0.25	3e-16

>sp|Q24746|NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=1

 Score =  334 bits (856), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 166/346 (47%), Positives = 230/346 (66%), Gaps = 41/346 (11%)

Query: 28  GTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTN 87
           G NNLPPL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS N
Sbjct: 91  GPNNLPPLQFHTVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNN 150

Query: 88  WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGD 147
           W+G IRFGFT+NDPA L+ ALP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGD
Sbjct: 151 WNGGIRFGFTSNDPASLEGALPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNNAGD 210

Query: 148 VHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQL--------------- 192
           V +GIN EEKGV  +G++TRG LW + DIYGN T I+ +D+R  +               
Sbjct: 211 VIYGINNEEKGVILSGIDTRGLLWTVIDIYGNCTGIEFLDARIYMYQQQQQQQQQQQQQL 270

Query: 193 ----------------NNARRVSTH--LSPEELSSPINNNSNIDL-MNRYIVNSMAAMNV 233
                              ++++ H  L     S P      +D  + R+++ S+ ++  
Sbjct: 271 QQQQLPQQQLPQQQQQLPQQQLTAHHPLQQSRRSLPGGTGVVVDHELERHVMPSLQSL-- 328

Query: 234 HPQSTPAPLPEDTQV----PLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFS 289
           H   T A + E        PLR   +   L+P+PFH T GRNVRLS+DR +ASR +++F 
Sbjct: 329 HLAGTAAGIIEHDLANGLPPLR-YNANGRLIPVPFHITKGRNVRLSHDRFVASRTESDFC 387

Query: 290 QGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPS 335
           QGYVFT RP+++GEK+++QVL+TE  Y GALALGLTSCNPA L+P+
Sbjct: 388 QGYVFTARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPALLQPN 433

Involved in neurogenesis. Interacts with other neurogenic proteins in the specification of the neuroblast versus epidermoblast cell fate.
Drosophila virilis (taxid: 7244)

>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2

 Score =  334 bits (856), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 161/344 (46%), Positives = 227/344 (65%), Gaps = 37/344 (10%)

Query: 28  GTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTN 87
           G NNLPPL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS N
Sbjct: 100 GPNNLPPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNN 159

Query: 88  WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGD 147
           W+G IRFGFT+NDP  L+  LP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGD
Sbjct: 160 WNGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGD 219

Query: 148 VHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQL--------------- 192
           V +GIN EEKGV  TG++TR  LW + DIYGN T I+ +DSR  +               
Sbjct: 220 VIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMATVPA 279

Query: 193 ----------NNARRVSTHLSPEE--LSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPA 240
                     N +  +++H   ++   S P +  +    + R+++ S+ ++++       
Sbjct: 280 QQQQMPQPAANASSALNSHHPHQQSRRSLPGHTAAIEHDLERHVMPSLQSLHLAGNGGSV 339

Query: 241 PLPEDTQV---------PLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQG 291
              E   +         PLR   +   L+P+PFH T GRNVRLS DR +ASR +++F QG
Sbjct: 340 ASVEQAAIAHDLANGLPPLR-YNANGRLIPVPFHNTKGRNVRLSQDRFVASRTESDFCQG 398

Query: 292 YVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPS 335
           YVFT RP+++GEK+++QVL+TE  Y GALALGLTSCNPA L+P+
Sbjct: 399 YVFTARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQPN 442

Involved in neurogenesis. Interacts with other neurogenic proteins in the specification of the neuroblast versus epidermoblast cell fate.

Drosophila melanogaster (taxid: 7227)

>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1 SV=1

 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 167/308 (54%), Gaps = 8/308 (2%)

Query: 34  PLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           P +  Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +R
Sbjct: 39  PRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALR 98

Query: 94  FGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
           FGFTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +
Sbjct: 99  FGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSV 158

Query: 153 NGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDS--RAQLNNARRVSTHLS--PEELS 208
           N  E  +F  GV   GPLWA+ D+YG +  +QL++S     L   R     LS  P   S
Sbjct: 159 NDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESTFADTLTPLRLGQARLSACPPPGS 218

Query: 209 SPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDL-VPLPFHRT 267
               N  N +L N  +V  +  + +      A +P   +   R  +SP  L   L FH T
Sbjct: 219 HDAANFDNNELENNQVVAKLGHLAL--GRPDAAVPCVARERPRPASSPALLDAELRFHAT 276

Query: 268 IGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSC 327
            G +V LS DR +A     +  +  VF+ RP++ GE + ++V         A+A G+TSC
Sbjct: 277 RGPDVSLSADRRLACAPRPDGGRTLVFSERPLRPGESLCVEVGRPGLAAPAAVAFGITSC 336

Query: 328 NPASLKPS 335
           +P +L+PS
Sbjct: 337 DPGALRPS 344

E3 ubiquitin-protein ligase.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1 SV=1

 Score =  191 bits (484), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/334 (34%), Positives = 169/334 (50%), Gaps = 51/334 (15%)

Query: 34  PLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           P +  Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +R
Sbjct: 39  PRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALR 98

Query: 94  FGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
           FGFTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +
Sbjct: 99  FGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSV 158

Query: 153 NGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR-------AQLNNARRVSTHLSPE 205
           N  E  +F  GV   GPLWA+ D+YG +  +QL++S        A+L+ A R S  L P 
Sbjct: 159 NDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESAFADTLTPARLSQA-RFSACLPPS 217

Query: 206 ELSSPINNNSNIDLMNRYIVNSMAAMNV------------------------HPQSTPAP 241
             S    N  N +L N  +V  +  + +                         P S+PA 
Sbjct: 218 --SHDAANFDNNELENNQVVAKLGHLALGRAPGPPPADAAAAAIPCGPRERPRPASSPAL 275

Query: 242 LPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQL 301
           L  D                L FH T G +V LS DR +A     +  +  VF+ RP++ 
Sbjct: 276 LEAD----------------LRFHATRGPDVSLSADRKVACAPRPDGGRTLVFSERPLRP 319

Query: 302 GEKIVIQVLETESRYYGALALGLTSCNPASLKPS 335
           GE + ++V        GALA G+TSC+P  L+P+
Sbjct: 320 GESLFVEVGRPGLAAPGALAFGITSCDPGVLRPN 353

E3 ubiquitin-protein ligase.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1

 Score =  182 bits (462), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 164/321 (51%), Gaps = 6/321 (1%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
            P T S  G    P L+     G  + +       KR  SFC  + FS+RPV I E+V +
Sbjct: 49  CPPTLSGGGLPATPLLFHPHTKGSQILMDLSHKAVKRQASFCNAITFSNRPVLIYEQVRL 108

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLK-YALPRYVCPDLTNKPGYWAKALAERFADQETVL 138
           K+ +    WSG +R GFT+ DP+ +   +LP+Y CPDL ++ G+WAKAL E FA++  ++
Sbjct: 109 KITKKQCCWSGALRLGFTSKDPSRIHPDSLPKYACPDLVSQSGFWAKALPEEFANEGNII 168

Query: 139 FYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRV 198
            ++V   G V + IN     +FF+GV T  PLWA+ D+YG +  +QL+DS   L +  R 
Sbjct: 169 AFWVDKKGRVFYRINESAAMLFFSGVRTVDPLWALVDVYGLTRGVQLLDSELVLPDCLRP 228

Query: 199 STHLS---PEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTS 255
            +  +   P           ++ L +  +  +       P   P P         RAL +
Sbjct: 229 RSFTALRRPSLRCEADEARLSVSLCDLNVPGADGDDGAPPAGCPIPQNSLNSQHSRALPA 288

Query: 256 PQDLVPLPFHRT-IGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETES 314
             D   L FH    G +VR+ +++T+A        +  VFT RPV++ E I I+V  +  
Sbjct: 289 QLD-GDLRFHALRAGAHVRILDEQTVARLEHGRDERALVFTSRPVRVAETIFIKVTRSGG 347

Query: 315 RYYGALALGLTSCNPASLKPS 335
              GAL+ G+T+C+P +L+P+
Sbjct: 348 GRAGALSFGVTTCDPGTLRPA 368

Can function as an E3 ubiquitin-protein ligase to activate monoubiquitination of JAG1 (in vitro).

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1

 Score =  178 bits (451), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 168/313 (53%), Gaps = 17/313 (5%)

Query: 34  PLYFH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVI 92
           PL FH    G  + +       KR  SFC  + FS+RPV I E+V +K+ +    WSG +
Sbjct: 62  PLLFHPHTKGSQILMDLSHKAVKRQASFCNAITFSNRPVLIYEQVRLKITKKQCCWSGAL 121

Query: 93  RFGFTANDPAHLK-YALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFG 151
           R GFT+ DP+ +   +LP+Y CPDL ++ G+WAKAL E FA++  ++ ++V   G V   
Sbjct: 122 RLGFTSKDPSRIHPDSLPKYACPDLVSQSGFWAKALPEEFANEGNIIAFWVDKKGRVFHR 181

Query: 152 INGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPI 211
           IN     +FF+GV T  PLWA+ D+YG +  +QL+DS   L +  R      P   ++  
Sbjct: 182 INDSAVMLFFSGVRTADPLWALVDVYGLTRGVQLLDSELVLPDCLR------PRSFTALR 235

Query: 212 NNNSNIDLMNRYIVNSMAAMNV----HPQSTPA---PLPEDTQVPLRALTSPQDL-VPLP 263
             +   +  +  +  S+  +NV      ++ PA   P+P+++     +   P  L   L 
Sbjct: 236 RPSLRREADDARLSVSLCDLNVPGADGDEAAPAAGCPIPQNSLNSQHSRALPAQLDGDLR 295

Query: 264 FHRT-IGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALAL 322
           FH    G +VR+ +++T+A        +  VFT RPV++ E I ++V  +     GAL+ 
Sbjct: 296 FHALRAGAHVRILDEQTVARVEHGRDERALVFTSRPVRVAETIFVKVTRSGGARPGALSF 355

Query: 323 GLTSCNPASLKPS 335
           G+T+C+P +L+P+
Sbjct: 356 GVTTCDPGTLRPA 368

May function as an E3 ubiquitin-protein ligase to activate monoubiquitination of JAG1.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q96EH8|NEUL3_HUMAN E3 ubiquitin-protein ligase NEURL3 OS=Homo sapiens GN=NEURL3 PE=2 SV=2

 Score =  108 bits (270), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 2/158 (1%)

Query: 35  LYFH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           L FH +  G  VR+   G +A R  +F  G+ FS RPV++ E+V +++L   + W G +R
Sbjct: 18  LRFHAEAKGAQVRLDTRGCIAHRRTTFHDGIVFSQRPVRLGERVALRVLREESGWCGGLR 77

Query: 94  FGFTANDPAHLKY-ALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
            GFT  DPA +   +LP ++CPDL  +   WA  L E  A    ++ ++V   G +   +
Sbjct: 78  VGFTRLDPACVSVPSLPPFLCPDLEEQSPTWAAVLPEGCALTGDLVRFWVDRRGCLFAKV 137

Query: 153 NGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRA 190
           N   + +   GV    PLWA+ D+YG + AI+L+D  A
Sbjct: 138 NAGCRLLLREGVPVGAPLWAVMDVYGTTKAIELLDPTA 175

E3 ubiquitin-protein ligase. Seems to utilize UBE2E1. In vitro, generates polyubiquitin chains via non-canonical lysine residues suggesting that it is not involved in tagging substrates for proteasomal degradation.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q8CJC5|NEUL3_MOUSE E3 ubiquitin-protein ligase NEURL3 OS=Mus musculus GN=Neurl3 PE=2 SV=1

 Score =  101 bits (251), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 97/193 (50%), Gaps = 7/193 (3%)

Query: 35  LYFH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           L FH    G  V +    + A+R  +F  G+ FS RPV   E+V +++L     W G +R
Sbjct: 18  LSFHGNATGAQVHLDDQRSTARRRSTFHDGIVFSQRPVWPGERVALRVLRHEEGWCGGLR 77

Query: 94  FGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
            GFT  DPA +  + LP +VCPDL  +   WA  L E F     V+ ++V   G +   +
Sbjct: 78  VGFTRLDPAQVAASCLPPFVCPDLEEQSPTWAALLPEGFVRAGNVVCFWVNRRGWLFAKV 137

Query: 153 NGEEKGVFFTGVETRG-PLWAMFDIYGNSTAIQLIDSRAQ--LNNARRV--STHLSPEEL 207
           N     +    V  +G PLWA+ D+YG + AI+L+D +A   + +   V  S  +S EE 
Sbjct: 138 NAGRPLLLRKDVLVQGAPLWAVMDVYGTTKAIELLDPKANAWIRSGEPVPESEVISGEEC 197

Query: 208 SSPINNNSNIDLM 220
               +N +N  LM
Sbjct: 198 VICFHNTANTRLM 210

E3 ubiquitin-protein ligase. Seems to utilize UBE2E1. In vitro, generates polyubiquitin chains via non-canonical lysine residues suggesting that it is not involved in tagging substrates for proteasomal degradation.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q5M870|NEUL3_RAT E3 ubiquitin-protein ligase NEURL3 OS=Rattus norvegicus GN=Neurl3 PE=2 SV=1

 Score =  100 bits (249), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 13/196 (6%)

Query: 35  LYFH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           L FH    G  V +    + A+R  +F  G+ FS RPV   E+V +++L     W G +R
Sbjct: 18  LSFHGDATGAQVHLDDQRSTARRRSTFHDGIVFSQRPVWPGERVALRVLRHEDGWCGGLR 77

Query: 94  FGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
            GFT  DPA +  + LP +VCPDL  +   WA  L E F     V+ ++V   G +   +
Sbjct: 78  VGFTRLDPAQVAASCLPPFVCPDLEEQSPTWAALLPEGFVRAGNVVCFWVNRRGWLFAKV 137

Query: 153 NGEEKGVFFTGVETRG-PLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSP------- 204
           N     +    V  +G PLWA+ D+YG + AI+L+D +A   NA   S    P       
Sbjct: 138 NAGRPLLLRKDVLVQGAPLWAVMDVYGTTKAIELLDPKA---NAWITSGEPMPESEVTSG 194

Query: 205 EELSSPINNNSNIDLM 220
           EE     +N +N  LM
Sbjct: 195 EECVICFHNTANTRLM 210

E3 ubiquitin-protein ligase. Seems to utilize UBE2E1. In vitro, generates polyubiquitin chains via non-canonical lysine residues suggesting that it is not involved in tagging substrates for proteasomal degradation.

Rattus norvegicus (taxid: 10116)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|A1L0Y2|NEUL4_XENTR Neuralized-like protein 4 OS=Xenopus tropicalis GN=neurl4 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 124/320 (38%), Gaps = 74/320 (23%)

Query: 31  NLPPLYFHQVHGENVRVSRDGTVAKRYES---FCKGVAFSSRPVKINEKVYVKLLEISTN 87
           +L  L FH +HG N  ++  G    R  S   F   +  SSRP++  E   + + ++   
Sbjct: 642 SLSDLRFHHLHGANALITNGGRTVLRKNSRSEFNDAIVMSSRPLRDGEMFEIVIQKMVDR 701

Query: 88  WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGY--WAKALAERFADQETVLFYY---- 141
           WSG I  G TA  P  L++       P+      Y  W  +      D  T+   Y    
Sbjct: 702 WSGSIEAGVTAIRPEDLEF-------PNTMTDIDYDTWMLSGTAIMQDGNTLRNNYGCDL 754

Query: 142 ------------VTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR 189
                        T  GD+H+ INGE++GV  TG+     ++A+ D+YG    + L    
Sbjct: 755 DSLGAGSRIGMMKTIRGDLHYFINGEDQGVACTGLPMGRDIYAVIDLYGQCVQVSLTGGS 814

Query: 190 AQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVP 249
             ++                                NS++A +V  +S P+         
Sbjct: 815 GLVD--------------------------------NSLSASHVTDKSLPS--------- 833

Query: 250 LRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQV 309
                SP   V   FH   G+NV +  D T A  R    S G VF+ R +   E   I+V
Sbjct: 834 ----QSPVPSVSHRFHTVCGKNVSVLCDGTRA-ERGAGCSHGIVFSSRELLTNETFEIRV 888

Query: 310 LETESRYYGALALGLTSCNP 329
            + E  + G+  +G+TS +P
Sbjct: 889 EKIEPHWSGSCNIGVTSLSP 908

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
242021537	669	neuralized, putative [Pediculus humanus	0.895	0.461	0.592	1e-108
91078084	642	PREDICTED: similar to neuralized [Tribol	0.866	0.465	0.607	1e-107
383862507	717	PREDICTED: protein neuralized-like [Mega	0.884	0.425	0.596	1e-107
328778267	721	PREDICTED: protein neuralized [Apis mell	0.889	0.425	0.593	1e-107
332022138	764	Protein neuralized [Acromyrmex echinatio	0.927	0.418	0.575	1e-106
340726159	718	PREDICTED: protein neuralized-like [Bomb	0.884	0.424	0.587	1e-106
350405207	719	PREDICTED: protein neuralized-like [Bomb	0.884	0.424	0.587	1e-106
307214255	645	Protein neuralized [Harpegnathos saltato	0.875	0.468	0.593	1e-105
380024747	717	PREDICTED: LOW QUALITY PROTEIN: protein	0.889	0.428	0.586	1e-105
322785139	625	hypothetical protein SINV_14225 [Solenop	0.872	0.481	0.587	1e-103

>gi|242021537|ref|XP_002431201.1| neuralized, putative [Pediculus humanus corporis] gi|212516450|gb|EEB18463.1| neuralized, putative [Pediculus humanus corporis]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/334 (59%), Positives = 244/334 (73%), Gaps = 25/334 (7%)

Query: 17  CVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEK 76
           C+ A R+GS SGTNNLPPL FHQVHG+N+R+S D +VA+R ESFC+GVAFSSRPVK+NEK
Sbjct: 5   CLLASRSGS-SGTNNLPPLLFHQVHGDNIRLSGDNSVARRVESFCRGVAFSSRPVKVNEK 63

Query: 77  VYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQET 136
           V++K LE+S NWSGVIRFGFT+NDP++L+Y LP+Y CPDLT+KPGYWAKALAERFA+++T
Sbjct: 64  VFIKFLEVSNNWSGVIRFGFTSNDPSNLRYCLPKYACPDLTSKPGYWAKALAERFAERDT 123

Query: 137 VLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQ-LNNA 195
           VL+YYVTA GDV+FGINGEEKG+F +GVETRGP+WA+FD+YGNST I+L+D R   +NN+
Sbjct: 124 VLYYYVTAMGDVYFGINGEEKGIFLSGVETRGPVWALFDVYGNSTGIELVDQRGSPMNNS 183

Query: 196 RR-------------VSTHLSPEELSSPINN-NSNIDLMNRYIVNSMAAMNVHPQSTPAP 241
            R             V + L P   S  I N N  I  +    V     ++VH  S+   
Sbjct: 184 IRRNFSNGSGDVSPDVDSQLMPSLQSLSIQNANQRIIGLGLGGVGLGGGLDVHGNSSAL- 242

Query: 242 LPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQL 301
                    R   +  +L P PFHRT GRNVRLSNDR +A+R DTEF  GYVFT +P+ L
Sbjct: 243 --------TRYHQTGTELTPFPFHRTRGRNVRLSNDRCLATRTDTEFCLGYVFTSKPIML 294

Query: 302 GEKIVIQVLETESRYYGALALGLTSCNPASLKPS 335
           GEKIVIQ+L TE  Y GALA GLTSC+PA L+ S
Sbjct: 295 GEKIVIQILATEPMYAGALAFGLTSCDPAKLQIS 328

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078084|ref|XP_972157.1| PREDICTED: similar to neuralized [Tribolium castaneum] gi|270001399|gb|EEZ97846.1| hypothetical protein TcasGA2_TC000216 [Tribolium castaneum]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/316 (60%), Positives = 232/316 (73%), Gaps = 17/316 (5%)

Query: 20  APRTGSNSG-TNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVY 78
           A R+GSN G TNNLPPL FH VHGEN+R+SRDGT+A+R ESFCKG+AFSSRPVK+NEK+ 
Sbjct: 42  ASRSGSNGGGTNNLPPLLFHNVHGENIRISRDGTIARRVESFCKGIAFSSRPVKVNEKIC 101

Query: 79  VKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVL 138
           +K LEIS NWSGVIRFGFT NDP+ L+Y LP+Y CPDLTNKPGYWAKAL ERF  Q TVL
Sbjct: 102 IKFLEISNNWSGVIRFGFTFNDPSSLRYGLPKYACPDLTNKPGYWAKALPERFCSQNTVL 161

Query: 139 FYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRV 198
           FYYVT+ GDVHFGINGEEKG+FF+ VETRGPLWA+ D+YGNSTAI+ +D R QLNN+RR 
Sbjct: 162 FYYVTSTGDVHFGINGEEKGIFFSSVETRGPLWALIDVYGNSTAIEFVDIRHQLNNSRRN 221

Query: 199 STHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQ- 257
               S E      N   ++D     I+  M  +++  +       ED  +PL     PQ 
Sbjct: 222 IASNSCE------NPPEDVD----RIIYRMEQVHIQQRDN-----EDLSLPLLRYQPPQL 266

Query: 258 DLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYY 317
           +  P+  HRT GRNVR  + R  A R DTEF QGYVFT RP+QLGE++V+Q+L TE  + 
Sbjct: 267 NFNPMMLHRTRGRNVRFGSTRNNAYRTDTEFCQGYVFTARPLQLGERVVVQILATEPMFQ 326

Query: 318 GALALGLTSCNPASLK 333
           G L LGLTSC+PA+L+
Sbjct: 327 GCLGLGLTSCDPATLQ 342

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862507|ref|XP_003706725.1| PREDICTED: protein neuralized-like [Megachile rotundata]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/320 (59%), Positives = 242/320 (75%), Gaps = 15/320 (4%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ S++GTNNLPPL FHQVHGEN+R+   GT+A+RYESFC+G+ FS+RPV++ EKV V
Sbjct: 102 APRS-SSAGTNNLPPLTFHQVHGENIRLCNGGTIARRYESFCRGITFSARPVRVGEKVCV 160

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKA+AER A+++TVLF
Sbjct: 161 KFLEISNNWSGVIRFGFTSNDPINLRNGLPRYACPDLTNKPGYWAKAMAERLAERDTVLF 220

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRV 198
           YYVT+AGDVHFG+NGEEKGVFF+GVETRGPLWA+ D+YGNSTAI+ +D +R   NN RR 
Sbjct: 221 YYVTSAGDVHFGVNGEEKGVFFSGVETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRG 280

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVP-LRA 252
           + H + +       S +++ SN    + R IV SM +M++H +        D ++P LR 
Sbjct: 281 AEHSNEDNAQHSRHSAMDDASNASRDVERIIVPSMQSMSIHHE-------PDVELPGLRF 333

Query: 253 LTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             +     PLPFH T GRN+R SN + +A+R DTEF  GY FT RP+ LGE++V+Q+L T
Sbjct: 334 QPAGVIFTPLPFHPTRGRNIRFSNQQCVATRTDTEFCHGYAFTSRPLLLGERLVVQILAT 393

Query: 313 ESRYYGALALGLTSCNPASL 332
           E  Y GALALGLTSC+PA L
Sbjct: 394 EPMYVGALALGLTSCDPARL 413

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778267|ref|XP_001120035.2| PREDICTED: protein neuralized [Apis mellifera]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/322 (59%), Positives = 241/322 (74%), Gaps = 15/322 (4%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ S++GTNNLPPL FHQVHGEN+R+   GT+A+RYESFC+G+ FS+R V++ EKV V
Sbjct: 103 APRS-SSAGTNNLPPLTFHQVHGENIRLCNGGTIARRYESFCRGITFSARAVRVGEKVCV 161

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKA+AERFA+++TVLF
Sbjct: 162 KFLEISDNWSGVIRFGFTSNDPINLRNGLPRYACPDLTNKPGYWAKAMAERFAERDTVLF 221

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRV 198
           YYVT+AGDVHFGINGEEKGVFF+GVETRGPLWA+ D+YGNSTAI+ +D +R   NN RR 
Sbjct: 222 YYVTSAGDVHFGINGEEKGVFFSGVETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRG 281

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRAL 253
           + H + +       S +++ SN    + R IV SM  M++H +        D ++P    
Sbjct: 282 TEHSNEDNAQHSRHSAMDDASNASRDVERIIVPSMQGMSIHHE-------PDVELPGLRF 334

Query: 254 TSPQDL-VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             P  +  PLPFH T GRN+R SN + +A+R DTEF  GY FT +P+ LGE++V+Q+L T
Sbjct: 335 QPPGVIFTPLPFHSTRGRNIRFSNQQCVATRTDTEFCHGYAFTSQPLLLGERLVVQILAT 394

Query: 313 ESRYYGALALGLTSCNPASLKP 334
           E  Y GALALGLTSC+PA L P
Sbjct: 395 EPMYVGALALGLTSCDPARLTP 416

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022138|gb|EGI62460.1| Protein neuralized [Acromyrmex echinatior]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/337 (57%), Positives = 247/337 (73%), Gaps = 17/337 (5%)

Query: 3   PLNFPSTNRPRFFSCVTAPRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCK 62
           P+ F + N+    S  ++PR+ SN+GTNNLPPL FH VHG+N+R+   GT+A+R+ESFCK
Sbjct: 131 PVYFQTENKDAKLS--SSPRS-SNAGTNNLPPLTFHHVHGDNIRLCNGGTIARRHESFCK 187

Query: 63  GVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGY 122
           GV FS+RPV++ EKV VK LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGY
Sbjct: 188 GVTFSARPVRVGEKVCVKFLEISDNWSGVIRFGFTSNDPINLRSGLPRYACPDLTNKPGY 247

Query: 123 WAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTA 182
           WAKALAERFA+++TVLFYYVT+AGDVHFG+NGEEKG+FF+GVETRGPLWA+ D+YGNSTA
Sbjct: 248 WAKALAERFAERDTVLFYYVTSAGDVHFGVNGEEKGLFFSGVETRGPLWAIIDVYGNSTA 307

Query: 183 IQLID-SRAQLNNARRVSTHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQ 236
           I+ +D +R   NN RR + H + +       S +++ SN    + R IV SM  M++H +
Sbjct: 308 IEFVDPNRQHFNNIRRGAEHSNEDNAQHSRHSAMDDASNAGRDVERIIVPSMQNMSIHHE 367

Query: 237 STPAPLPEDTQVPLRALTSPQDL-VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFT 295
                   D ++P      P  L  PLPFH T GRN+  SN + +A+R DTEF  GY FT
Sbjct: 368 -------PDVELPGLRFQPPGVLFTPLPFHSTRGRNICFSNQQCVATRTDTEFCHGYAFT 420

Query: 296 GRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASL 332
            RP+ LGE++V+Q+L TE  Y GALALGLTSC+PA L
Sbjct: 421 SRPLLLGERLVVQILSTEPMYVGALALGLTSCDPARL 457

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726159|ref|XP_003401429.1| PREDICTED: protein neuralized-like [Bombus terrestris]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/320 (58%), Positives = 242/320 (75%), Gaps = 15/320 (4%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ S++GTNNLPPL FHQVHGEN+R+   GT+A+RYESFC+G+ FS+RPV++ EK+ V
Sbjct: 99  APRS-SSAGTNNLPPLTFHQVHGENIRLCNGGTIARRYESFCRGITFSARPVRVGEKICV 157

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKA+AERFA+++TVLF
Sbjct: 158 KFLEISDNWSGVIRFGFTSNDPINLRNGLPRYACPDLTNKPGYWAKAMAERFAERDTVLF 217

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRV 198
           YYVT+AGDVHFG+NGEEKGVFF+G+ETRGPLWA+ D+YGNSTAI+ +D +R   NN RR 
Sbjct: 218 YYVTSAGDVHFGVNGEEKGVFFSGIETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRG 277

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVP-LRA 252
           + H + +       S +++ SN    + R IV SM  +++H +        D ++P LR 
Sbjct: 278 TEHSNEDNAQHSRHSAMDDASNASRDVERIIVPSMQGISIHHE-------PDVELPGLRF 330

Query: 253 LTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             +     PLPFH T GRN+R SN + +A+R DTEF  GY FT +P+ LGE++V+Q+L T
Sbjct: 331 QPAGVIFTPLPFHLTRGRNIRFSNQQCVATRTDTEFCHGYAFTSQPLLLGERLVVQILAT 390

Query: 313 ESRYYGALALGLTSCNPASL 332
           E  Y GALALGLTSC+PA L
Sbjct: 391 EPMYVGALALGLTSCDPARL 410

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350405207|ref|XP_003487359.1| PREDICTED: protein neuralized-like [Bombus impatiens]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/320 (58%), Positives = 242/320 (75%), Gaps = 15/320 (4%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ S++GTNNLPPL FHQVHGEN+R+   GT+A+RYESFC+G+ FS+RPV++ EK+ V
Sbjct: 99  APRS-SSAGTNNLPPLTFHQVHGENIRLCNGGTIARRYESFCRGITFSARPVRVGEKICV 157

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKA+AERFA+++TVLF
Sbjct: 158 KFLEISDNWSGVIRFGFTSNDPINLRNGLPRYACPDLTNKPGYWAKAMAERFAERDTVLF 217

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRV 198
           YYVT+AGDVHFG+NGEEKGVFF+G+ETRGPLWA+ D+YGNSTAI+ +D +R   NN RR 
Sbjct: 218 YYVTSAGDVHFGVNGEEKGVFFSGIETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRG 277

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVP-LRA 252
           + H + +       S +++ SN    + R IV SM  +++H +        D ++P LR 
Sbjct: 278 TEHSNEDNAQHSRHSAMDDASNASRDVERIIVPSMQGISIHHE-------PDVELPGLRF 330

Query: 253 LTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             +     PLPFH T GRN+R SN + +A+R DTEF  GY FT +P+ LGE++V+Q+L T
Sbjct: 331 QPAGVIFTPLPFHLTRGRNIRFSNQQCVATRTDTEFCHGYAFTSQPLLLGERLVVQILAT 390

Query: 313 ESRYYGALALGLTSCNPASL 332
           E  Y GALALGLTSC+PA L
Sbjct: 391 EPMYVGALALGLTSCDPARL 410

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214255|gb|EFN89351.1| Protein neuralized [Harpegnathos saltator]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/317 (59%), Positives = 240/317 (75%), Gaps = 15/317 (4%)

Query: 21  PRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVK 80
           PR+ S++GTNNLPPL FH VHG+N+R+   GT+A+R+ESFCKGV FS+RPV++ EKV VK
Sbjct: 1   PRS-SSAGTNNLPPLTFHHVHGDNIRLCNGGTIARRHESFCKGVTFSARPVRVGEKVCVK 59

Query: 81  LLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFY 140
            LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKALAERFA+++TVLFY
Sbjct: 60  FLEISDNWSGVIRFGFTSNDPINLRSGLPRYACPDLTNKPGYWAKALAERFAERDTVLFY 119

Query: 141 YVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRVS 199
           YVT+AGDVHFG+NGEEKG+FF+GVETRGPLWA+ D+YGNSTAI+ +D +R   NN RR +
Sbjct: 120 YVTSAGDVHFGVNGEEKGLFFSGVETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRGA 179

Query: 200 THLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVP-LRAL 253
            H + +       S +++ SN    + R IV SM ++++H +        D ++P LR  
Sbjct: 180 EHSNEDNAQHSRHSAMDDASNAGRDVERIIVPSMQSLSIHHE-------PDVELPGLRFQ 232

Query: 254 TSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETE 313
            +     PLPFH T GRN+R SN + +A+R DTEF  GY FT RP+ LGE++V+Q+L TE
Sbjct: 233 PAGVIFTPLPFHSTRGRNIRFSNQQCVATRTDTEFCHGYAFTSRPLLLGERLVVQILSTE 292

Query: 314 SRYYGALALGLTSCNPA 330
             Y GALALGLTSC+PA
Sbjct: 293 PMYVGALALGLTSCDPA 309

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024747|ref|XP_003696153.1| PREDICTED: LOW QUALITY PROTEIN: protein neuralized-like [Apis florea]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/322 (58%), Positives = 239/322 (74%), Gaps = 15/322 (4%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ S++GTNNLPPL FHQVHGEN+R+   GT+A+RYESFC+G+ FS+R V++ EKV V
Sbjct: 99  APRS-SSAGTNNLPPLTFHQVHGENIRLCNGGTIARRYESFCRGITFSARAVRVGEKVCV 157

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVI FGFT+NDP +L+  LPRY CPDLTNKPGYWAKA+AERFA+++TVLF
Sbjct: 158 KFLEISDNWSGVIXFGFTSNDPINLRNGLPRYACPDLTNKPGYWAKAMAERFAERDTVLF 217

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLID-SRAQLNNARRV 198
           YYVT+AGDVHFGINGEEKGVFF+GVETRGPLWA+ D+YGNSTAI+ +D +R   NN RR 
Sbjct: 218 YYVTSAGDVHFGINGEEKGVFFSGVETRGPLWAIIDVYGNSTAIEFVDPNRQHFNNIRRG 277

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRAL 253
           + H + +       S +++ SN    + R IV SM  M++H +        D ++P    
Sbjct: 278 TEHSNEDNAQHSRHSAMDDASNASRDVERIIVPSMQGMSIHHE-------PDVELPGLRF 330

Query: 254 TSPQDL-VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             P  +  PLPFH T GRN+  SN + +A+R DTEF  GY FT +P+ LGE++V+Q+L T
Sbjct: 331 QPPGVIFTPLPFHSTRGRNIXFSNQQCVATRTDTEFCHGYAFTSQPLLLGERLVVQILAT 390

Query: 313 ESRYYGALALGLTSCNPASLKP 334
           E  Y GALALGLTSC+PA L P
Sbjct: 391 EPMYVGALALGLTSCDPARLTP 412

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785139|gb|EFZ11863.1| hypothetical protein SINV_14225 [Solenopsis invicta]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/320 (58%), Positives = 237/320 (74%), Gaps = 19/320 (5%)

Query: 20  APRTGSNSGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYV 79
           APR+ SN+GTNNLPPL FH VHG+N+R+   GT+A+R+ESFCKGV FS+RPV++ EKV V
Sbjct: 1   APRS-SNTGTNNLPPLTFHHVHGDNIRLCNGGTIARRHESFCKGVTFSARPVRVGEKVCV 59

Query: 80  KLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLF 139
           K LEIS NWSGVIRFGFT+NDP +L+  LPRY CPDLTNKPGYWAKALAERFA+++TVLF
Sbjct: 60  KFLEISDNWSGVIRFGFTSNDPINLRSGLPRYACPDLTNKPGYWAKALAERFAERDTVLF 119

Query: 140 YYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDS-RAQLNNARRV 198
           YYVT+AGDVHFG+NGEEKG+FF+GVETRGPLWA+ D+YGNSTAI+ +D+ R   NN RR 
Sbjct: 120 YYVTSAGDVHFGVNGEEKGLFFSGVETRGPLWAIIDVYGNSTAIEFVDANRQHFNNIRRG 179

Query: 199 STHLSPEELS----SPINNNSNIDL-MNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRAL 253
           + H + +       S +++ SN    + R IV SM  M++H +        D ++P    
Sbjct: 180 AEHSNEDNAQHSRHSAMDDASNAGRDVERIIVPSMQNMSIHHE-------PDVELPGLRF 232

Query: 254 TSPQDLV-PLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLET 312
             P  +   LPFH     N+R SN + +A+R DTEF  GY FTGRP+ LGE++V+Q+L T
Sbjct: 233 QPPGVIFSSLPFH----SNIRFSNQQCVATRTDTEFCHGYAFTGRPLLLGERLVVQILST 288

Query: 313 ESRYYGALALGLTSCNPASL 332
           E  Y GALALGLTSC+PA L
Sbjct: 289 EPMYVGALALGLTSCDPARL 308

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
FB|FBgn0002932	754	neur "neuralized" [Drosophila	0.611	0.279	0.502	3.1e-87
WB|WBGene00017342	617	F10D7.5 [Caenorhabditis elegan	0.449	0.251	0.512	1.8e-62
UNIPROTKB|Q24746	747	neur "Protein neuralized" [Dro	0.637	0.294	0.490	2.7e-59
UNIPROTKB|F1NBK9	506	F1NBK9 "Uncharacterized protei	0.840	0.573	0.378	1.2e-51
UNIPROTKB|F1PDY4	555	NEURL1B "Uncharacterized prote	0.852	0.529	0.377	4.7e-48
UNIPROTKB|A8MQ27	555	NEURL1B "E3 ubiquitin-protein	0.852	0.529	0.377	9.8e-48
ZFIN|ZDB-GENE-050522-102	560	zgc:110426 "zgc:110426" [Danio	0.855	0.526	0.377	1.2e-47
UNIPROTKB|F1MPM5	522	NEURL1B "Uncharacterized prote	0.860	0.568	0.375	3.3e-47
RGD|1564984	546	Neurl1B "neuralized homolog 1B	0.857	0.542	0.374	5.4e-47
MGI|MGI:3643092	546	Neurl1b "neuralized homolog 1b	0.860	0.543	0.372	6.9e-47

FB|FBgn0002932 neur "neuralized" [Drosophila melanogaster (taxid:7227)]

 Score = 600 (216.3 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
 Identities = 111/221 (50%), Positives = 153/221 (69%)

Query:    28 GTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTN 87
             G NNLPPL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS N
Sbjct:   100 GPNNLPPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNN 159

Query:    88 WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGD 147
             W+G IRFGFT+NDP  L+  LP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGD
Sbjct:   160 WNGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGD 219

Query:   148 VHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEEL 207
             V +GIN EEKGV  TG++TR  LW + DIYGN T I+ +DSR  +   +  +  ++    
Sbjct:   220 VIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMA---- 275

Query:   208 SSPINNNSNIDLMNRYIVNSMAAMNVH-P-QSTPAPLPEDT 246
             + P         M +   N+ +A+N H P Q +   LP  T
Sbjct:   276 TVPAQQQQ----MPQPAANASSALNSHHPHQQSRRSLPGHT 312

GO:0007398 "ectoderm development" evidence=TAS

GO:0007498 "mesoderm development" evidence=IMP

GO:0007422 "peripheral nervous system development" evidence=IMP

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=NAS

GO:0030707 "ovarian follicle cell development" evidence=TAS

GO:0007399 "nervous system development" evidence=IMP;NAS

GO:0048749 "compound eye development" evidence=IMP;TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0016360 "sensory organ precursor cell fate determination" evidence=IMP

GO:0007423 "sensory organ development" evidence=IMP

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0045314 "regulation of compound eye photoreceptor development" evidence=IMP

GO:0046532 "regulation of photoreceptor cell differentiation" evidence=IMP

GO:0045747 "positive regulation of Notch signaling pathway" evidence=TAS

GO:0008356 "asymmetric cell division" evidence=TAS

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0008593 "regulation of Notch signaling pathway" evidence=IMP

GO:0008104 "protein localization" evidence=IMP

GO:0042048 "olfactory behavior" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0030718 "germ-line stem cell maintenance" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

WB|WBGene00017342 F10D7.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 476 (172.6 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
 Identities = 80/156 (51%), Positives = 116/156 (74%)

Query:    34 PLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
             PL FH +HG NV + ++G +AKR ESFCKG+AFS+RP++I+E V ++L E+ TNWSGV+R
Sbjct:    38 PLQFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVLR 97

Query:    94 FGFTANDPAHLK-YALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGI 152
             FG T +DP   +   +P + CPDLT K GYWAKAL ER++++  +L +YV A G++ +GI
Sbjct:    98 FGVTNDDPEMYRDIPVPTFACPDLTTKDGYWAKALPERYSNEGNILHFYVNAHGELFYGI 157

Query:   153 NGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDS 188
             NG +KG+F TG+    P+W + DIYGNS  +++ID+
Sbjct:   158 NGSQKGMFLTGINVHRPMWLILDIYGNSVGVEIIDA 193

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|Q24746 neur "Protein neuralized" [Drosophila virilis (taxid:7244)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 109/222 (49%), Positives = 152/222 (68%)

Query:    28 GTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTN 87
             G NNLPPL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS N
Sbjct:    91 GPNNLPPLQFHTVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNN 150

Query:    88 WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGD 147
             W+G IRFGFT+NDPA L+ ALP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGD
Sbjct:   151 WNGGIRFGFTSNDPASLEGALPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNNAGD 210

Query:   148 VHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEEL 207
             V +GIN EEKGV  +G++TRG LW + DIYGN T I+ +D+R  +   ++       ++L
Sbjct:   211 VIYGINNEEKGVILSGIDTRGLLWTVIDIYGNCTGIEFLDARIYMYQQQQQQQQQQQQQL 270

Query:   208 SSPINNNSNIDLMNRYIVNSMAAMNVHP-QSTPAPLPEDTQV 248
                      +    + +       + HP Q +   LP  T V
Sbjct:   271 QQQQLPQQQLPQQQQQLPQQQLTAH-HPLQQSRRSLPGGTGV 311

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007399 "nervous system development" evidence=ISS

GO:0007422 "peripheral nervous system development" evidence=ISS

GO:0007423 "sensory organ development" evidence=ISS

GO:0007498 "mesoderm development" evidence=ISS

GO:0016360 "sensory organ precursor cell fate determination" evidence=ISS

GO:0016567 "protein ubiquitination" evidence=ISS

UNIPROTKB|F1NBK9 F1NBK9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
 Identities = 117/309 (37%), Positives = 177/309 (57%)

Query:    34 PLYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVI 92
             PL FH    G+NVR+      A R  SFC G+ F++RP+ + EKV +KL+ +   WSG +
Sbjct:     1 PLRFHSHAKGKNVRLDTHSRRATRRNSFCNGITFTNRPIHLYEKVRLKLVAVHHGWSGAL 60

Query:    93 RFGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFG 151
             RFGFT +DP+ +    +P+Y CPDL  +PGYWAKAL ERFA ++ VL ++V   G V + 
Sbjct:    61 RFGFTTHDPSQMSSDDIPKYACPDLVTRPGYWAKALPERFAVRDNVLAFWVDRHGRVFYS 120

Query:   152 INGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPI 211
             IN EE  +F  G++  GPLWA+ D+YG +  +Q+      L N  R+ST L P+      
Sbjct:   121 INDEEPILFHCGIKVSGPLWALIDVYGITHEVQI------LGNTARLSTCL-PQSNHDSA 173

Query:   212 NNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQ-DLVP------LPF 264
             N N+N +L N  +V  +A +N+     P  + ++  +P      P+   VP      L F
Sbjct:   174 NFNNN-ELENNQVVAKIANLNL--SRVPGLVTDNHIIPCCPNRRPRVQGVPAFLDTDLRF 230

Query:   265 HRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGL 324
             H T G ++  S DR +A     E ++  VF+ RP+ +GE + ++V      YYGA + G+
Sbjct:   231 HPTHGPDITFSQDRMVAWTNWQESNRTLVFSDRPLHIGESLFVEVGHLGMPYYGAFSFGI 290

Query:   325 TSCNPASLK 333
             TSC+P++L+
Sbjct:   291 TSCDPSTLR 299

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PDY4 NEURL1B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 120/318 (37%), Positives = 173/318 (54%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +RFG
Sbjct:    41 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 100

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +N 
Sbjct:   101 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 160

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR-------AQLNNARRVSTHLSPEEL 207
              E  +F  GV   GPLWA+ D+YG +  +QL++S        A+L+ AR  S  L P   
Sbjct:   161 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESAFADTLTPARLSQAR-FSACLPPS-- 217

Query:   208 SSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQ---VPL------RALTSPQD 258
             S    N  N +L N  +V  +  + +     P P P D     +P       R  +SP  
Sbjct:   218 SHDAANFDNNELENNQVVAKLGHLALG--RAPGPPPADASAAAIPCGPRERPRPASSPAL 275

Query:   259 L-VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYY 317
             L   L FH T G +V LS DR +A     +  +  VF+ RP++ GE + ++V        
Sbjct:   276 LEADLRFHATRGPDVSLSADRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAP 335

Query:   318 GALALGLTSCNPASLKPS 335
             GALA G+TSC+P  L+P+
Sbjct:   336 GALAFGITSCDPGGLRPA 353

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A8MQ27 NEURL1B "E3 ubiquitin-protein ligase NEURL1B" [Homo sapiens (taxid:9606)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 120/318 (37%), Positives = 173/318 (54%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +RFG
Sbjct:    41 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 100

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +N 
Sbjct:   101 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 160

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR-------AQLNNARRVSTHLSPEEL 207
              E  +F  GV   GPLWA+ D+YG +  +QL++S        A+L+ AR  S  L P   
Sbjct:   161 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESAFADTLTPARLSQAR-FSACLPPS-- 217

Query:   208 SSPINNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQ---VPL------RALTSPQD 258
             S    N  N +L N  +V  +  + +     P P P D     +P       R  +SP  
Sbjct:   218 SHDAANFDNNELENNQVVAKLGHLALG--RAPGPPPADAAAAAIPCGPRERPRPASSPAL 275

Query:   259 L-VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYY 317
             L   L FH T G +V LS DR +A     +  +  VF+ RP++ GE + ++V        
Sbjct:   276 LEADLRFHATRGPDVSLSADRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAP 335

Query:   318 GALALGLTSCNPASLKPS 335
             GALA G+TSC+P  L+P+
Sbjct:   336 GALAFGITSCDPGVLRPN 353

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

ZFIN|ZDB-GENE-050522-102 zgc:110426 "zgc:110426" [Danio rerio (taxid:7955)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 117/310 (37%), Positives = 171/310 (55%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH    G+N+R+      A R  SFC G+ FS RPV++ EKV ++L  + T WSG +RFG
Sbjct:    48 FHPHAKGKNIRLDAHLRRATRKNSFCNGITFSQRPVRLYEKVRLRLSGVHTGWSGALRFG 107

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FT  DP  L    +P+Y CPDL  +PGYWAKAL ER A ++ VL ++    G V + IN 
Sbjct:   108 FTTLDPGELSLTDIPKYACPDLVTRPGYWAKALPERLAMRDNVLAFWADRHGRVFYSIND 167

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR-AQLNNARRVST-HLS---PEELSS 209
              E  +F  G+    P+WA+ DIYG +  + L++S  A+   A  +ST  LS   P+    
Sbjct:   168 GEPILFHCGLSVGCPVWAIIDIYGITQEVTLLESTFAESVGASCLSTARLSAYLPQSNHD 227

Query:   210 PINNNSNIDLMNRYIVNSMAAMNVH------PQSTPAPLPEDT-QVPLRALTSPQDLVPL 262
               N ++N    N+      A + +       P  + +  P  + Q P R+L+ P D V L
Sbjct:   228 SANYSNNQLETNQAAAAKFATLQLSNYNQLIPCCSTSSTPSSSVQRPARSLSLPLD-VDL 286

Query:   263 PFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALAL 322
              FH   G +V LSNDRT+A     + S+  +F+ RPV++GE + ++V      Y+GAL  
Sbjct:   287 HFHPVRGPDVVLSNDRTVACTHFLDSSRTLMFSDRPVRVGETLYLEVGHLGLPYFGALLF 346

Query:   323 GLTSCNPASL 332
             G+TSC+P +L
Sbjct:   347 GMTSCDPGTL 356

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1MPM5 NEURL1B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 117/312 (37%), Positives = 170/312 (54%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +RFG
Sbjct:     1 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 60

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +N 
Sbjct:    61 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 120

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRA-QLNNAR--RVSTHLSPEELSSPI 211
              E  +F  GV   GPLWA+ D+YG +  +QL+ S     ++ R  R S  L P   S   
Sbjct:   121 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLASPLLSPDDLRPARFSACLPPS--SHDA 178

Query:   212 NNNSNIDLMNRYIVNSMAAMNVHPQSTPAP-------LPEDTQVPLRALTSPQDL-VPLP 263
              N  N +L N  +V  +  + +     PAP       +P   +   R  +SP  L   L 
Sbjct:   179 ANFDNNELENNQVVAKLGHLALGRAPGPAPADHAAAAIPCGPRERQRPSSSPALLEADLR 238

Query:   264 FHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALG 323
             FH T G +V LS DR +A     +  +  VF+ RP++ GE + ++V        GALA G
Sbjct:   239 FHATRGPDVSLSLDRKVACAPRPDGGRTLVFSERPLRPGESLFVEVGRPGLAAPGALAFG 298

Query:   324 LTSCNPASLKPS 335
             +TSC+P  L+P+
Sbjct:   299 ITSCDPGGLRPA 310

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1564984 Neurl1B "neuralized homolog 1B (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 115/307 (37%), Positives = 168/307 (54%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +RFG
Sbjct:    41 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 100

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +N 
Sbjct:   101 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 160

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQ--LNNARRVSTHLS--PEELSSP 210
              E  +F  GV   GPLWA+ D+YG +  +QL++S     L   R     LS  P   S  
Sbjct:   161 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESTFADTLTPLRLGQARLSACPPPGSHD 220

Query:   211 INNNSNIDLMNRYIVNSMAAMNV-HPQSTPAPLPEDTQVPLRALTSPQDL-VPLPFHRTI 268
               N  N +L N  +V  +  + +  P    A +P   +   R  +SP  L   L FH T 
Sbjct:   221 AANFDNNELENNQVVAKLGHLALGRPD---AAVPCVARERARPASSPALLDAELRFHATR 277

Query:   269 GRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCN 328
             G +V LS DR +A     +  +  VF+ RP++ GE + ++V         A+A G+TSC+
Sbjct:   278 GPDVSLSADRRLACAPRPDGGRTLVFSERPLRPGESLCVEVGRPGLAAPAAVAFGITSCD 337

Query:   329 PASLKPS 335
             P +L+PS
Sbjct:   338 PGALRPS 344

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:3643092 Neurl1b "neuralized homolog 1b (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 114/306 (37%), Positives = 166/306 (54%)

Query:    37 FH-QVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFG 95
             FH Q  G+NVR+      A R  SFC GV F+ RP+++ E+V ++L+ +   WSG +RFG
Sbjct:    41 FHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQVRLRLVAVRPGWSGALRFG 100

Query:    96 FTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGING 154
             FTA+DP+ +    +P+Y CPDL  +PGYWAKAL E  A ++TVL Y+    G V + +N 
Sbjct:   101 FTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYWADRHGRVFYSVND 160

Query:   155 EEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQ--LNNARRVSTHLS--PEELSSP 210
              E  +F  GV   GPLWA+ D+YG +  +QL++S     L   R     LS  P   S  
Sbjct:   161 GEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESTFADTLTPLRLGQARLSACPPPGSHD 220

Query:   211 INNNSNIDLMNRYIVNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDL-VPLPFHRTIG 269
               N  N +L N  +V  +  + +       P     + P R  +SP  L   L FH T G
Sbjct:   221 AANFDNNELENNQVVAKLGHLALGRPDAAVPCVARER-P-RPASSPALLDAELRFHATRG 278

Query:   270 RNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNP 329
              +V LS DR +A     +  +  VF+ RP++ GE + ++V         A+A G+TSC+P
Sbjct:   279 PDVSLSADRRLACAPRPDGGRTLVFSERPLRPGESLCVEVGRPGLAAPAAVAFGITSCDP 338

Query:   330 ASLKPS 335
              +L+PS
Sbjct:   339 GALRPS 344

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	345
smart00588	123	smart00588, NEUZ, domain in neuralized proteins	5e-43
pfam07177	68	pfam07177, Neuralized, Neuralized	1e-29
cd12887	161	cd12887, SPRY_NHR_like, SPRY domain in neuralized	6e-25
smart00588	123	smart00588, NEUZ, domain in neuralized proteins	6e-24
pfam07177	68	pfam07177, Neuralized, Neuralized	2e-22
cd12887	161	cd12887, SPRY_NHR_like, SPRY domain in neuralized	4e-18

>gnl|CDD|128856 smart00588, NEUZ, domain in neuralized proteins

 Score =  144 bits (366), Expect = 5e-43
 Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 34  PLYFHQVHGENVRVSRDGTVAKRYES-FCKGVAFSSRPVKINEKVYVKLLEISTNWSGVI 92
           PL FH  HG N+R+S  G VA+R  S FC  + FS+RP++INE   VK+ ++   WSG +
Sbjct: 2   PLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGAL 61

Query: 93  RFGFTANDPAHLKYA-LPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFG 151
           RFG T  DPA L+ A LP   CPDL +  G+WAKAL E  A+Q  +L   V A G+V   
Sbjct: 62  RFGVTTCDPATLRPASLPTNACPDLVDMSGFWAKALGEGLAEQGGILGLDVLAEGEVVGV 121

Query: 152 IN 153
           IN
Sbjct: 122 IN 123

Length = 123

>gnl|CDD|115807 pfam07177, Neuralized, Neuralized

 Score =  108 bits (271), Expect = 1e-29
 Identities = 40/68 (58%), Positives = 52/68 (76%)

Query: 34  PLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           PL FH  HG N+R+S DGT+A+R ESFC  + FS+RPV+I E+V VK+L+I  NWSG +R
Sbjct: 1   PLQFHPTHGSNIRLSDDGTLARRRESFCDAITFSARPVRIGERVCVKVLKIENNWSGGLR 60

Query: 94  FGFTANDP 101
            GFT+ DP
Sbjct: 61  LGFTSLDP 68

This family contains a conserved region approximately 60 residues long within eukaryotic neuralized and neuralized-like proteins. Neuralized belongs to a group of ubiquitin ligases and is required in a subset of Notch pathway-mediated cell fate decisions during development of the Drosophila nervous system. Some family members contain multiple copies of this region. Length = 68

>gnl|CDD|240467 cd12887, SPRY_NHR_like, SPRY domain in neuralized homology repeat

 Score = 98.7 bits (247), Expect = 6e-25
 Identities = 55/169 (32%), Positives = 83/169 (49%), Gaps = 26/169 (15%)

Query: 36  YFHQVHGENVRVSRDGTVAKR-YESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRF 94
            FH+ HG+NVR+S DG  A R  +SF  G+ FSSRP++  E   V++ ++   WSG +  
Sbjct: 1   RFHENHGKNVRLSNDGRTATRVKDSFNNGIVFSSRPLRPGELFEVRIDKLEDRWSGSLEI 60

Query: 95  GFTANDPAHLKYALPRYVCPDLTN-KPGYWAKALAERFADQETVLFYY------------ 141
           G T  DP  L   LP    P  T+ K G W  + +  F +   V   Y            
Sbjct: 61  GVTTLDPESLD--LP----PSATDLKSGTWILSGSSVFKNGNKVRENYGPDLDRLRVGDR 114

Query: 142 ----VTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLI 186
                T  G +HF INGE++GV  + +    P++A+ D+YG    + ++
Sbjct: 115 VGVMRTPDGSLHFYINGEDQGVAASNIPQ--PVYAVVDLYGQCEQVSIV 161

This family contains the neuralized homology repeat 1 (NHR1) domain similar to the SPRY domain (known to mediate specific protein-protein interactions) at the C-terminus of a conserved region within eukaryotic neuralized and neuralized-like proteins. In Drosophila, the neuralized protein (Neur) belongs to a group of ubiquitin ligases and is required in a subset of Notch pathway-mediated cell fate decisions during development of the nervous system. Neur binds to the Notch receptor ligand Delta through its first NHR1 domain and mediates its ubiquitination for endocytosis. Multiple copies of this region are found in some members of the family. Length = 161

>gnl|CDD|128856 smart00588, NEUZ, domain in neuralized proteins

 Score = 94.7 bits (236), Expect = 6e-24
 Identities = 27/76 (35%), Positives = 48/76 (63%)

Query: 260 VPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGA 319
            PL FH   G N+RLS+   +A R  ++F    VF+ RP+++ E   +++ +   ++ GA
Sbjct: 1   GPLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGA 60

Query: 320 LALGLTSCNPASLKPS 335
           L  G+T+C+PA+L+P+
Sbjct: 61  LRFGVTTCDPATLRPA 76

Length = 123

>gnl|CDD|115807 pfam07177, Neuralized, Neuralized

 Score = 88.6 bits (220), Expect = 2e-22
 Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 261 PLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGAL 320
           PL FH T G N+RLS+D T+A RR++ F     F+ RPV++GE++ ++VL+ E+ + G L
Sbjct: 1   PLQFHPTHGSNIRLSDDGTLARRRES-FCDAITFSARPVRIGERVCVKVLKIENNWSGGL 59

Query: 321 ALGLTSCNP 329
            LG TS +P
Sbjct: 60  RLGFTSLDP 68

This family contains a conserved region approximately 60 residues long within eukaryotic neuralized and neuralized-like proteins. Neuralized belongs to a group of ubiquitin ligases and is required in a subset of Notch pathway-mediated cell fate decisions during development of the Drosophila nervous system. Some family members contain multiple copies of this region. Length = 68

>gnl|CDD|240467 cd12887, SPRY_NHR_like, SPRY domain in neuralized homology repeat

 Score = 79.9 bits (198), Expect = 4e-18
 Identities = 29/70 (41%), Positives = 45/70 (64%)

Query: 264 FHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALG 323
           FH   G+NVRLSND   A+R    F+ G VF+ RP++ GE   +++ + E R+ G+L +G
Sbjct: 2   FHENHGKNVRLSNDGRTATRVKDSFNNGIVFSSRPLRPGELFEVRIDKLEDRWSGSLEIG 61

Query: 324 LTSCNPASLK 333
           +T+ +P SL 
Sbjct: 62  VTTLDPESLD 71

This family contains the neuralized homology repeat 1 (NHR1) domain similar to the SPRY domain (known to mediate specific protein-protein interactions) at the C-terminus of a conserved region within eukaryotic neuralized and neuralized-like proteins. In Drosophila, the neuralized protein (Neur) belongs to a group of ubiquitin ligases and is required in a subset of Notch pathway-mediated cell fate decisions during development of the nervous system. Neur binds to the Notch receptor ligand Delta through its first NHR1 domain and mediates its ubiquitination for endocytosis. Multiple copies of this region are found in some members of the family. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
KOG4625|consensus	595		100.0
smart00588	123	NEUZ domain in neuralized proteins.	100.0
KOG4625|consensus	595		99.96
PF07177	69	Neuralized: Neuralized; InterPro: IPR006573 NEUZ i	99.94
smart00588	123	NEUZ domain in neuralized proteins.	99.9
PF07177	69	Neuralized: Neuralized; InterPro: IPR006573 NEUZ i	99.9
PF00622	124	SPRY: SPRY domain; InterPro: IPR003877 The SPRY do	97.31
smart00449	122	SPRY Domain in SPla and the RYanodine Receptor. Do	97.26
KOG4030|consensus	197		95.96
KOG2626|consensus	544		93.0
KOG3953|consensus	242		84.53

>KOG4625|consensus

Probab=100.00  E-value=2.5e-57  Score=453.47  Aligned_cols=298  Identities=38%  Similarity=0.659  Sum_probs=252.8

Q ss_pred             CCCCCCCCCCCCCccccC------cCCCCCCC-CCCCCCCCcccccCCCCceEEecCCeeEEecccCCCeEEEcCCcCCC
Q psy269            1 MDPLNFPSTNRPRFFSCV------TAPRTGSN-SGTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKI   73 (345)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~l~FH~~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~   73 (345)
                      +||.-|+-+.+++.---+      ...++.++ ..+....+|+||++||+||+|++++++|+|.++||+|||||+|||++
T Consensus        61 s~~~P~~~~~~~~~~~~~~l~~~~~~~p~~~n~~~p~~~~pl~fH~iHGsNi~I~~~g~~A~RraSF~dAItFSnRPl~~  140 (595)
T KOG4625|consen   61 SDPGPFAENDPGRVYKVGHLYGKGEVLPSGSNQVTPLSRFPLQFHSIHGSNIRIDNSGTLAKRRASFCDAITFSNRPLRI  140 (595)
T ss_pred             CCCCCcccccCCccccceeccCCcccCCCccCCcCcCCCCCceeecccCcceEECCCcceeehhhhhcceeeeccCcCCC
Confidence            355566666665554333      12244444 55667889999999999999999999999999999999999999999


Q ss_pred             CCEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccccceeEecccccccCCCcEEEEEEcCCceEEEEEc
Q psy269           74 NEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGIN  153 (345)
Q Consensus        74 ~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~~~W~~~~~~~~~~~g~~l~~~~~~~G~l~~~VN  153 (345)
                      ||.|+|||+|++..|+|+||+|||..||+.+++..+.||||||+++.+||++++++.|+++|+++.||++..|+++|.||
T Consensus       141 ~E~f~v~ieki~~~WSG~irlGvT~~dPe~i~~~~~tfa~PDL~nl~G~Wa~al~e~~~n~~~i~~~~v~~~g~v~~~in  220 (595)
T KOG4625|consen  141 GELFLVEIEKIERGWSGHLRLGVTSLDPEDIRPSPETFACPDLVNLSGFWAKALPETYRNEGNILAFAVNPKGRVFYGIN  220 (595)
T ss_pred             CcEEEEEEEEeccCccceeEeecccCCHhhccCCCccccCcchhccCchhhhhcchhhcccccchhhhhcCCCcceeeec
Confidence            99999999999999999999999999999999733479999999999999999999999999999999999999999999


Q ss_pred             CCcceeeeecCCCCC---------ceEEEEeccCCceEEEEecCccccccccccccCCCCcccCCCCCCCCcccccchhh
Q psy269          154 GEEKGVFFTGVETRG---------PLWAMFDIYGNSTAIQLIDSRAQLNNARRVSTHLSPEELSSPINNNSNIDLMNRYI  224 (345)
Q Consensus       154 G~~~G~~~~~V~~~~---------pLwAvvDvYG~t~~V~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (345)
                      |..+++|+.||.+..         ..|+++|+|+++.++++.+........                            +
T Consensus       221 ~~~~~~fftgi~~~~~a~~~~s~~~~r~~~~l~~~~~~~sl~~a~~~~~~~----------------------------~  272 (595)
T KOG4625|consen  221 GSGKMHFFTGIRTQGHACSRPSLAQARHPVDLLVQCVPVSLHDAGLDAAAL----------------------------L  272 (595)
T ss_pred             CcceEEEeecccccchhhccCCchheeehhhhhccccchhhhhcccchhhc----------------------------c
Confidence            999999999997521         589999999999999887644321100                            0


Q ss_pred             hcccccccCCCCCCCCCCCCCCCCCCccCCCCCCCCCCccccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCe
Q psy269          225 VNSMAAMNVHPQSTPAPLPEDTQVPLRALTSPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEK  304 (345)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~FH~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~  304 (345)
                      .++-+.                .....+.+++....+++||.++|+||+|+.++++|.|....|++++||++|||+.+|+
T Consensus       273 ~~s~s~----------------~s~~~~~~~~~~~~~~rfH~~~G~nv~l~~d~tvA~r~~~~~s~glVFterPlr~~e~  336 (595)
T KOG4625|consen  273 APSNSR----------------NSQHSRLLPPGLDGPLRFHATKGANVRLSDDGTVARREHGAYSQGLVFTERPLRVGEK  336 (595)
T ss_pred             CCcccc----------------ccccccccCCCCCCccceeeeccccccccCCCcccccccccccceEEEEecccccCCE
Confidence            000000                0123345666668899999999999999999999999988899999999999999999


Q ss_pred             EEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcccc
Q psy269          305 IVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSI  342 (345)
Q Consensus       305 ~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~~~  342 (345)
                      |+|+|.+++..|.|+|+||+|+|||++|++.+||+++.
T Consensus       337 ~~Ikv~~v~~l~~G~L~lGvT~~dpg~l~p~~Lp~sp~  374 (595)
T KOG4625|consen  337 LEIKVTRVGRLYAGALSLGVTTCDPGTLRPADLPFSPE  374 (595)
T ss_pred             EEEEeeecchhhcchhhccceecCccccccCCCCCChh
Confidence            99999999999999999999999999999999999863

>smart00588 NEUZ domain in neuralized proteins

Probab=100.00  E-value=4e-37  Score=260.56  Aligned_cols=120  Identities=48%  Similarity=0.841  Sum_probs=117.2

Q ss_pred             CcccccCCCCceEEecCCeeEEeccc-CCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCc-CCCCC
Q psy269           34 PLYFHQVHGENVRVSRDGTVAKRYES-FCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKY-ALPRY  111 (345)
Q Consensus        34 ~l~FH~~~G~nV~Ls~~~~~A~R~~s-f~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~LP~~  111 (345)
                      +|+||..||+||+|++++++|+|..+ ||||||||+|||++||+|+|+|++.+.+|+|+|+||||+|||+.+++ +||.+
T Consensus         2 ~l~FH~~~G~ni~l~~~~~~A~R~~~~f~~givFS~rPl~~~E~~~v~i~~~~~~w~G~l~~G~Ts~dP~~l~~~~lp~~   81 (123)
T smart00588        2 PLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGALRFGVTTCDPATLRPASLPTN   81 (123)
T ss_pred             CcccccccCCCeEECCCCcEEEcccCCcCceEEecCCCCcCCCEEEEEEEEecCCccCceEEEEecCCcccccCccCccc
Confidence            69999999999999999999999876 99999999999999999999999999999999999999999999997 89999


Q ss_pred             CCCCcccccceeEecccccccCCCcEEEEEEcCCceEEEEEc
Q psy269          112 VCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGIN  153 (345)
Q Consensus       112 a~pdL~~~~~~W~~~~~~~~~~~g~~l~~~~~~~G~l~~~VN  153 (345)
                      ++|||.++++||++++.+.++..|+++.|+++.+|+|+|.||
T Consensus        82 ~~~dl~~~~g~wv~~~~~~~~~~g~~l~f~~~~~G~v~~~vn  123 (123)
T smart00588       82 ACPDLVDMSGFWAKALGEGLAEQGGILGLDVLAEGEVVGVIN  123 (123)
T ss_pred             CcccccccCCcceEECChhhccCCCEEEEEECCCceEEEEeC
Confidence            999999999999999999999999999999999999999998

>KOG4625|consensus

Probab=99.96  E-value=9.9e-30  Score=255.40  Aligned_cols=294  Identities=23%  Similarity=0.355  Sum_probs=217.7

Q ss_pred             CCCcccccCCCCceEEecCCeeEEecc-cCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCc-CCC
Q psy269           32 LPPLYFHQVHGENVRVSRDGTVAKRYE-SFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKY-ALP  109 (345)
Q Consensus        32 ~~~l~FH~~~G~nV~Ls~~~~~A~R~~-sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~LP  109 (345)
                      ..+++||.++|.||+|++++++|.|.. .|++|+||++|||+.+|+|+|+|+++...|.|+|.||+|+|||+++.. .||
T Consensus       291 ~~~~rfH~~~G~nv~l~~d~tvA~r~~~~~s~glVFterPlr~~e~~~Ikv~~v~~l~~G~L~lGvT~~dpg~l~p~~Lp  370 (595)
T KOG4625|consen  291 DGPLRFHATKGANVRLSDDGTVARREHGAYSQGLVFTERPLRVGEKLEIKVTRVGRLYAGALSLGVTTCDPGTLRPADLP  370 (595)
T ss_pred             CCccceeeeccccccccCCCcccccccccccceEEEEecccccCCEEEEEeeecchhhcchhhccceecCccccccCCCC
Confidence            348999999999999999999999975 499999999999999999999999999999999999999999999998 898


Q ss_pred             CCCCCCcccccceeEe-cccccccCCCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCceEEEEecC
Q psy269          110 RYVCPDLTNKPGYWAK-ALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDS  188 (345)
Q Consensus       110 ~~a~pdL~~~~~~W~~-~~~~~~~~~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~~V~ll~~  188 (345)
                      .+ ..+|+++++||++ +.-...+..|+++.|+++.+|||++.+||...|+.+ +||.+.+||+.+|+||...++.+++-
T Consensus       371 ~s-p~~l~~rpe~w~~s~~ia~~~~~~~~~~~~v~~~Gel~~~~~g~~a~~~l-~vD~sl~l~~~~~~~g~~as~~~~~~  448 (595)
T KOG4625|consen  371 FS-PEALVDRPEYWVVSCDIAGPPHVGDILQLVVNAYGELELSHNGAAAGVQL-CVDASLPLWMLFDVYGTIASIRILGV  448 (595)
T ss_pred             CC-hhhhccchhhhhheeecccCcccCceeeEEEcCCCcEEEeecCCceEEEE-EecCceeeeeeccccchhhhhhhccc
Confidence            87 4779999999973 222334678999999999999999999999999999 59999999999999998888888763


Q ss_pred             cccc---ccccccccCCCCcccCCCCCCCCcccccchhhhcccccccCCC-CCCCCCCCCCCCCCCccCCCCCCCCCCcc
Q psy269          189 RAQL---NNARRVSTHLSPEELSSPINNNSNIDLMNRYIVNSMAAMNVHP-QSTPAPLPEDTQVPLRALTSPQDLVPLPF  264 (345)
Q Consensus       189 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~F  264 (345)
                      -.-+   ...++.+...++     +  +..+++     ..+++..+.... +.......+.. +.. +.-.+.....++|
T Consensus       449 ~~v~~~y~~~~~vti~s~~-----~--s~~s~~-----tsp~~~~~~~g~~a~~~st~~~~~-~~~-~a~~~~~~s~~~v  514 (595)
T KOG4625|consen  449 LPVMDSYGPAERVTIPSSP-----S--SPASTP-----TSPSALSSDLGDTAPSDSTCSSGG-LGS-SAGGPSPPSTLSV  514 (595)
T ss_pred             cccccccCcccceeeccCC-----C--ccccCC-----CCCCccccCCCCCCCcccccccCC-CCc-CCCCCCCCCccch
Confidence            2211   001111000000     0  000000     001111111000 00000000000 000 1111222466788


Q ss_pred             ccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcccc
Q psy269          265 HRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLSSI  342 (345)
Q Consensus       265 H~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~~~  342 (345)
                      -..++.+..++.....+.|. ..++...+.+..|+-+.-.+..++.....+|..+...|+-++.|.+..+...+.++.
T Consensus       515 ~e~~~~~gl~~~~~~~~t~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~tss~~~~~~~~a~~~~n~~~~~~~~~  591 (595)
T KOG4625|consen  515 LESQSNNGLLSLVVNLPTRS-SSHDILGQLIAAPVTPQLVLAGACSSGRLQSTSSSQYIEQTIAPSTNNAPNSWCDSL  591 (595)
T ss_pred             hhccCCCccccccccCcccc-ccccccceEeccccchHHHhhhccccccccccccchhceeeeccccCCCCCchhhhh
Confidence            88899999998888888887 677888888888888888888899999999999999999999999999888777654

>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i

Probab=99.94  E-value=7.7e-27  Score=178.53  Aligned_cols=68  Identities=56%  Similarity=0.984  Sum_probs=53.0

Q ss_pred             Cccccc-CCCCceEEecCCeeEEecccCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDP  101 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP  101 (345)
                      ||+||+ +||+||+|++|+++|+|.++||||||||+|||+++|+|+|||++++..|+|+|+||||++||
T Consensus         1 pl~FH~~~~G~nV~L~~~~~~A~R~~sf~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~P   69 (69)
T PF07177_consen    1 PLRFHPNVHGKNVRLSNDGTVARRVSSFNNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCDP   69 (69)
T ss_dssp             S--EEC-EE-TTEEE-SSS-EEEEST-SSS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-C
T ss_pred             CccccCcccCCCEEEcCCCeEEEecccCCceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccCC
Confidence            689998 89999999999999999999999999999999999999999999999999999999999998

e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.

>smart00588 NEUZ domain in neuralized proteins

Probab=99.90  E-value=6.2e-24  Score=180.00  Aligned_cols=81  Identities=33%  Similarity=0.729  Sum_probs=77.3

Q ss_pred             CCccccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCCcc
Q psy269          261 PLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFLLS  340 (345)
Q Consensus       261 ~l~FH~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp~~  340 (345)
                      +|+||..||+||+|++++++|+|...+|++|||||+|||+++|+|+|+|++.+.+|+|+|+||||+|||++|++++||..
T Consensus         2 ~l~FH~~~G~ni~l~~~~~~A~R~~~~f~~givFS~rPl~~~E~~~v~i~~~~~~w~G~l~~G~Ts~dP~~l~~~~lp~~   81 (123)
T smart00588        2 PLRFHHRHGSNIRLSDSGRVARRSASDFCNALVFSARPLRINELFEVKIEKVVRKWSGALRFGVTTCDPATLRPASLPTN   81 (123)
T ss_pred             CcccccccCCCeEECCCCcEEEcccCCcCceEEecCCCCcCCCEEEEEEEEecCCccCceEEEEecCCcccccCccCccc
Confidence            68999999999999999999999977799999999999999999999999999999999999999999999999999944


Q ss_pred             c
Q psy269          341 S  341 (345)
Q Consensus       341 ~  341 (345)
                      .
T Consensus        82 ~   82 (123)
T smart00588       82 A   82 (123)
T ss_pred             C
Confidence            3

>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i

Probab=99.90  E-value=5.8e-24  Score=162.66  Aligned_cols=68  Identities=49%  Similarity=0.916  Sum_probs=52.2

Q ss_pred             CCcccc-CCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCC
Q psy269          261 PLPFHR-TIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNP  329 (345)
Q Consensus       261 ~l~FH~-~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P  329 (345)
                      +|+||+ .||+||+|++++++|+|. .+|++|||||+|||+.+|+|+|||++.+..|+|+|+||||+|||
T Consensus         1 pl~FH~~~~G~nV~L~~~~~~A~R~-~sf~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~P   69 (69)
T PF07177_consen    1 PLRFHPNVHGKNVRLSNDGTVARRV-SSFNNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCDP   69 (69)
T ss_dssp             S--EEC-EE-TTEEE-SSS-EEEES-T-SSS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-C
T ss_pred             CccccCcccCCCEEEcCCCeEEEec-ccCCceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccCC
Confidence            589999 799999999999999994 89999999999999999999999999999999999999999998

e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.

>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function

Probab=97.31  E-value=0.0048  Score=50.58  Aligned_cols=97  Identities=21%  Similarity=0.281  Sum_probs=64.6

Q ss_pred             EEEEEEEeEcCCcceeeEEeeeecCCCC-cCcCCCCCCCCCcccccceeEeccc----------c----cccCCCcEEEE
Q psy269           76 KVYVKLLEISTNWSGVIRFGFTANDPAH-LKYALPRYVCPDLTNKPGYWAKALA----------E----RFADQETVLFY  140 (345)
Q Consensus        76 ~~~v~I~~~~~~wsG~l~~GvT~~dP~~-l~~~LP~~a~pdL~~~~~~W~~~~~----------~----~~~~~g~~l~~  140 (345)
                      .|||+|.....     +.|||++.+-.. ....+.       ......|.....          +    .+...+|+|++
T Consensus         5 YwEV~v~~~~~-----~~iGv~~~~~~~~~~~~~~-------g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dvIG~   72 (124)
T PF00622_consen    5 YWEVEVDSGGS-----ISIGVATSSASVSGDENLS-------GYDPFSWGFHGDGGKKYHGGTSEETGSPFQEPGDVIGC   72 (124)
T ss_dssp             EEEEEETGGCT-----EEEEEEETTSEESSSTS-T-------TSSTTEEEEETTTTTEEESTSSSECSCTSSTTTSEEEE
T ss_pred             EEEEEEecCcC-----EEEEEeECccccCCccccC-------CccccceeeeccccccceeecccccccccccCCcEEEE
Confidence            46888875444     999999877611 111111       112244543211          1    11224999999


Q ss_pred             EEc-CCceEEEEEcCCcce-eeeecCCCCCceEEEEeccCCceEEEE
Q psy269          141 YVT-AAGDVHFGINGEEKG-VFFTGVETRGPLWAMFDIYGNSTAIQL  185 (345)
Q Consensus       141 ~~~-~~G~l~~~VNG~~~G-~~~~~V~~~~pLwAvvDvYG~t~~V~l  185 (345)
                      .++ ..|.|.|++||+..+ ..+..++...+||.+|-+++ ..+|++
T Consensus        73 ~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~v~~~~-~~~~~~  118 (124)
T PF00622_consen   73 GLDLDNGELSFYKNGKFLGIYAFTDIDFSEPLYPAVSLGG-GQSVEL  118 (124)
T ss_dssp             EEETTTTEEEEEETTEEEEEEEEESCTTSSSBEEEEEEES-TSEEEE
T ss_pred             EEeecccEEEEEECCccceeEEEECCCCCCcEEEEEEecC-CCEEEE
Confidence            997 679999999999988 77877888789999999997 444554

Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....

>smart00449 SPRY Domain in SPla and the RYanodine Receptor

Probab=97.26  E-value=0.0082  Score=49.37  Aligned_cols=93  Identities=23%  Similarity=0.384  Sum_probs=62.2

Q ss_pred             EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccccceeEeccc--------------ccccCCCcEEEEE
Q psy269           76 KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALA--------------ERFADQETVLFYY  141 (345)
Q Consensus        76 ~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~~~W~~~~~--------------~~~~~~g~~l~~~  141 (345)
                      .+||+|.+     ++.++|||.+.+=..-....       +-.....|+....              ..+...+|+|++.
T Consensus         5 YwEV~v~~-----~~~~~vGv~~~~~~r~~~~~-------~G~~~~sw~~~~~~g~~~~~~~~~~~~~~~~~~gd~iGv~   72 (122)
T smart00449        5 YFEVEIFD-----GGHWRVGVATKSVPRGYFAL-------LGEDKGSWGYDGDGGKKYHNSTGPEYGLPLQEPGDVIGCF   72 (122)
T ss_pred             EEEEEEcC-----CCeEEEEEEcCccCCCcccc-------CCCCCCEEEEEcCCCcEEeCCCCCccCccccCCCCEEEEE
Confidence            46888875     67899999865422100101       1112234542211              1222349999999


Q ss_pred             Ec-CCceEEEEEcCCcc-eeeeecCCCCCceEEEEeccCCc
Q psy269          142 VT-AAGDVHFGINGEEK-GVFFTGVETRGPLWAMFDIYGNS  180 (345)
Q Consensus       142 ~~-~~G~l~~~VNG~~~-G~~~~~V~~~~pLwAvvDvYG~t  180 (345)
                      ++ +.|+|.|+.||+.. ++++..++-.++|+.+|-+++..
T Consensus        73 lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~P~~~~~~~~  113 (122)
T smart00449       73 LDLEAGTISFYKNGKYLHGLAFFDVKFSGPLYPAVSLGSGC  113 (122)
T ss_pred             EECCCCEEEEEECCCEeeeEEEeccCCCCcEeeEEEcCCCC
Confidence            97 67999999999998 78777787777999999999765

Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.

>KOG4030|consensus

Probab=95.96  E-value=0.3  Score=43.19  Aligned_cols=129  Identities=22%  Similarity=0.400  Sum_probs=83.4

Q ss_pred             CCCCCCCCccccc-CCCCceEEecCCeeEEecccCCCeEEEcCCcCCCC-CEEEEEEEeEcCCcceeeEEeeeecCCCCc
Q psy269           27 SGTNNLPPLYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKIN-EKVYVKLLEISTNWSGVIRFGFTANDPAHL  104 (345)
Q Consensus        27 ~~~~~~~~l~FH~-~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~-E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l  104 (345)
                      +-.+..+..+.-. .-|++|.|-.++...+-.     |=+...-||..+ ..|+++|... ..|    .||+-+..-. +
T Consensus        21 ~rl~e~P~V~LD~~hMG~dVvilk~g~RicGt-----GG~lAtaPlvQnKsYFevkiQ~t-G~W----giGlat~q~~-l   89 (197)
T KOG4030|consen   21 PRLNEVPTVRLDVGHMGKDVVILKEGERICGT-----GGALATAPLVQNKSYFEVKIQQT-GTW----GIGLATKQSP-L   89 (197)
T ss_pred             hhhhcCCcEEeehhccCCcEEEEecCcEEecc-----CceeeeeeeecccceEEEEEeec-cee----eeeeeeccCc-c
Confidence            4445556777776 559999999888776643     234455577554 6789999753 445    4666543211 2


Q ss_pred             CcCCCCCCCCCcccccceeEecc---------------cccccCCCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCc
Q psy269          105 KYALPRYVCPDLTNKPGYWAKAL---------------AERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGP  169 (345)
Q Consensus       105 ~~~LP~~a~pdL~~~~~~W~~~~---------------~~~~~~~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~p  169 (345)
                      . ..|-. |     ...+|...-               ...++.+||++++.-+ .=+|.|++||...-.-++||.  .+
T Consensus        90 ~-~~p~g-~-----d~~sw~~r~dga~~hnnee~~r~pa~~~p~EGDvVGvayD-HVELnfY~NGKn~e~p~~gvR--G~  159 (197)
T KOG4030|consen   90 D-KVPGG-C-----DEKSWGIRDDGAIAHNNEEVARMPATVFPEEGDVVGVAYD-HVELNFYVNGKNVEDPITGVR--GP  159 (197)
T ss_pred             c-cCCCC-C-----cceeEEEccCCchhcccHHHhcCccccCCccCcEEEEEee-eEEEEEEEcCceecccccccc--cc
Confidence            1 23322 2     125786431               1124678999998766 579999999999888888876  48


Q ss_pred             eEEEEec
Q psy269          170 LWAMFDI  176 (345)
Q Consensus       170 LwAvvDv  176 (345)
                      +|.||=|
T Consensus       160 vyPvvYV  166 (197)
T KOG4030|consen  160 VYPVVYV  166 (197)
T ss_pred             eeeEEEe
Confidence            9988744

>KOG2626|consensus

Probab=93.00  E-value=0.52  Score=48.89  Aligned_cols=129  Identities=23%  Similarity=0.400  Sum_probs=82.6

Q ss_pred             CCCceEEecCCeeEEecccCCCeEEEcCCcCCCC-CEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccc
Q psy269           41 HGENVRVSRDGTVAKRYESFCKGVAFSSRPVKIN-EKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNK  119 (345)
Q Consensus        41 ~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~-E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~  119 (345)
                      .-.++.|+.++.+|.-..+|+  .|=+++=+..| ..|+|+|++.  .-.+++|+|.... =..|.      | |-=.++
T Consensus       300 rA~ql~Is~drlt~tgeKGy~--MvRAshgv~~G~WYFEI~vd~~--pd~~a~RlGwsq~-~g~Lq------A-pvGYdk  367 (544)
T KOG2626|consen  300 RAEQLKISEDRLTATGEKGYR--MVRASHGVLEGAWYFEIKVDEM--PDDAAIRLGWSQL-YGNLQ------A-PVGYDK  367 (544)
T ss_pred             ccccccccccceeeeccccee--eeeecccccccceeEEEEeecC--CCccceeeecccc-ccccc------c-cccccc
Confidence            567889999999998877774  34455556555 6889999887  5568899996331 11121      1 111233


Q ss_pred             cce-eE--------eccccccc---CCCcEEEEEE---------------------------------------------
Q psy269          120 PGY-WA--------KALAERFA---DQETVLFYYV---------------------------------------------  142 (345)
Q Consensus       120 ~~~-W~--------~~~~~~~~---~~g~~l~~~~---------------------------------------------  142 (345)
                      .+| |-        .++.+.|.   .+||+|||++                                             
T Consensus       368 fsY~wRdk~GtKfh~s~gk~Y~~gf~qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~  447 (544)
T KOG2626|consen  368 FSYGWRDKKGTKFHESLGKHYSDGFGQGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKI  447 (544)
T ss_pred             ccccccccCCcchhhhhhhhhhhhccCCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEccchhhhhhhcccc
Confidence            333 52        22333333   2466666654                                             


Q ss_pred             cCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCce
Q psy269          143 TAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNST  181 (345)
Q Consensus       143 ~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~  181 (345)
                      .+.-+..|+.||..+|+++.+|-.-..-|--|-+|+.|+
T Consensus       448 ~pgS~I~f~KNG~~qG~Ay~ni~~~G~YyPaIS~yks~t  486 (544)
T KOG2626|consen  448 KPGSEIEFFKNGVSQGVAYENIYKAGAYYPAISIYKSCT  486 (544)
T ss_pred             CCCceEEEeecccchhhhhhhhhccccccceeeecccce
Confidence            445667789999999999988863235778899996543

>KOG3953|consensus

Probab=84.53  E-value=2.7  Score=39.52  Aligned_cols=50  Identities=20%  Similarity=0.484  Sum_probs=40.4

Q ss_pred             CcEEEEEEc-CCceEEEEEcCCcceeeeecCCCCCceEEEE-eccCCceEEEEe
Q psy269          135 ETVLFYYVT-AAGDVHFGINGEEKGVFFTGVETRGPLWAMF-DIYGNSTAIQLI  186 (345)
Q Consensus       135 g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvv-DvYG~t~~V~ll  186 (345)
                      ++.+.+.++ .+|.+.|.+||+--|+++.+++ ++.||++| .+||.|. |++.
T Consensus       144 p~ri~viLDm~egtl~F~~~~e~LGvAFRgL~-~~~LYP~Vsav~g~~E-vtm~  195 (242)
T KOG3953|consen  144 PDRILVILDMIEGTLSFAADGEYLGVAFRGLK-DKKLYPAVSAVWGHCE-VTMK  195 (242)
T ss_pred             CceEEEEEeeccceEEEEECCeEEeeeecCCC-CCcceeeeeehhccee-EEEE
Confidence            455555554 8899999999999999999999 78999555 6889885 7665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	345
2yue_A	168	Solution Structure Of The Neuz (Nhr) Domain In Neur		4e-60
2yue_A	168	Solution Structure Of The Neuz (Nhr) Domain In Neur		8e-09
2e63_A	170	Solution Structure Of The Neuz Domain In Kiaa1787 P		3e-08

>pdb|2YUE|A Chain A, Solution Structure Of The Neuz (Nhr) Domain In Neuralized From Drosophila Melanogaster Length = 168

Iteration: 1
 Score =  228 bits (580), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 95/159 (59%), Positives = 127/159 (79%)
Query: 34  PLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
           PL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS NW+G IR
Sbjct: 8   PLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNNWNGGIR 67
Query: 94  FGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGIN 153
           FGFT+NDP  L+  LP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGDV +GIN
Sbjct: 68  FGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGDVIYGIN 127
Query: 154 GEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSRAQL 192
            EEKGV  TG++TR  LW + DIYGN T I+ +DSR  +
Sbjct: 128 NEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYM 166

>pdb|2YUE|A Chain A, Solution Structure Of The Neuz (Nhr) Domain In Neuralized From Drosophila Melanogaster Length = 168

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 261 PLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGAL 320
           PL FH   G N+R+S D T+A RR   F +   F+ RPV++ E+I ++  E  + + G +
Sbjct: 8   PLQFHSVHGDNIRISRDGTLA-RRFESFCRAITFSARPVRINERICVKFAEISNNWNGGI 66
Query: 321 ALGLTSCNPASLKPSV 336
             G TS +P +L+ ++
Sbjct: 67  RFGFTSNDPVTLEGTL 82

>pdb|2E63|A Chain A, Solution Structure Of The Neuz Domain In Kiaa1787 Protein Length = 170

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 30/171 (17%)
Query: 37  FHQVHGENVRVSRDGTVAKRYE---SFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIR 93
            H   G  V +S  G  A+R +    F  G+  S  P++      V++     +WSG I 
Sbjct: 9   LHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIE 68
Query: 94  FGFTANDPAHLKYALPRYVCPDLTN--KPGYWAKALAERFADQETVLFYYV--------- 142
            G TA DP+ L +       P      K G W  +      D  +VL  Y          
Sbjct: 69  IGVTALDPSVLDF-------PSSATGLKGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEG 121
Query: 143 -------TAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLI 186
                  T AG++   +NG + GV  TG+  R  +WA+ D+YG  T I ++
Sbjct: 122 DRVGVERTVAGELRLWVNGRDCGVAATGLPPR--VWAVVDLYGKCTQITVL 170

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	345
2yue_A	168	Protein neuralized; structure genomics, NEUZ(NHR)	1e-73
2yue_A	168	Protein neuralized; structure genomics, NEUZ(NHR)	2e-22
2e63_A	170	KIAA1787 protein; structure genomics, neuralized d	8e-52
2e63_A	170	KIAA1787 protein; structure genomics, neuralized d	2e-19

>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster} Length = 168

 Score =  224 bits (572), Expect = 1e-73
 Identities = 95/162 (58%), Positives = 128/162 (79%)

Query: 28  GTNNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTN 87
            + +  PL FH VHG+N+R+SRDGT+A+R+ESFC+ + FS+RPV+INE++ VK  EIS N
Sbjct: 2   SSGSSGPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNN 61

Query: 88  WSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGD 147
           W+G IRFGFT+NDP  L+  LP+Y CPDLTN+PG+WAKAL E++ +++ +L+YYV  AGD
Sbjct: 62  WNGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGD 121

Query: 148 VHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR 189
           V +GIN EEKGV  TG++TR  LW + DIYGN T I+ +DSR
Sbjct: 122 VIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSR 163

>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster} Length = 168

 Score = 91.9 bits (228), Expect = 2e-22
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 255 SPQDLVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETES 314
           S     PL FH   G N+R+S D T+A R +  F +   F+ RPV++ E+I ++  E  +
Sbjct: 2   SSGSSGPLQFHSVHGDNIRISRDGTLARRFE-SFCRAITFSARPVRINERICVKFAEISN 60

Query: 315 RYYGALALGLTSCNPASLKPSV 336
            + G +  G TS +P +L+ ++
Sbjct: 61  NWNGGIRFGFTSNDPVTLEGTL 82

>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 170

 Score =  168 bits (427), Expect = 8e-52
 Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 26/172 (15%)

Query: 34  PLYFHQVHGENVRVSRDGTVAKRYE---SFCKGVAFSSRPVKINEKVYVKLLEISTNWSG 90
               H   G  V +S  G  A+R +    F  G+  S  P++      V++     +WSG
Sbjct: 6   SGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSG 65

Query: 91  VIRFGFTANDPAHLKYALPRYVCPDLTNKPGYWAKALAERFADQETVLFYY--------- 141
            I  G TA DP+ L +            K G W  +      D  +VL  Y         
Sbjct: 66  SIEIGVTALDPSVLDFP-----SSATGLKGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGE 120

Query: 142 -------VTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLI 186
                   T AG++   +NG + GV  TG+     +WA+ D+YG  T I ++
Sbjct: 121 GDRVGVERTVAGELRLWVNGRDCGVAATGLPP--RVWAVVDLYGKCTQITVL 170

>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 170

 Score = 83.5 bits (206), Expect = 2e-19
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 261 PLPFHRTIGRNVRLSNDRTIASRRD--TEFSQGYVFTGRPVQLGEKIVIQVLETESRYYG 318
               H   GR V LS     A R+    EF+ G V +  P++ G    +++    + + G
Sbjct: 6   SGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSG 65

Query: 319 ALALGLTSCNPASLK 333
           ++ +G+T+ +P+ L 
Sbjct: 66  SIEIGVTALDPSVLD 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
2yue_A	168	Protein neuralized; structure genomics, NEUZ(NHR)	100.0
2e63_A	170	KIAA1787 protein; structure genomics, neuralized d	100.0
2yue_A	168	Protein neuralized; structure genomics, NEUZ(NHR)	99.88
2e63_A	170	KIAA1787 protein; structure genomics, neuralized d	99.85
3toj_A	213	SET1/ASH2 histone methyltransferase complex subun;	97.92
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	97.86
3emw_A	217	SPRY domain-containing SOCS box protein 2; apoptos	97.58
2jk9_A	212	SPRY domain-containing SOCS box protein 1; transcr	97.14
2afj_A	226	Gene rich cluster, C9 gene; beta sandwich, gene re	96.71
2vok_A	188	52 kDa RO protein; polymorphism, immune system, me	95.08
3uv9_A	186	TRIM5alpha, tripartite motif-containing protein 5;	95.05
2fbe_A	201	Predicted: similar to RET finger protein-like 1; d	93.58
2wl1_A	191	Pyrin, marenostrin; amyloidosis, polymorphism, cyt	93.23

>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}

Probab=100.00  E-value=1.2e-54  Score=384.35  Aligned_cols=161  Identities=59%  Similarity=1.166  Sum_probs=155.2

Q ss_pred             CCCCCcccccCCCCceEEecCCeeEEecccCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCC
Q psy269           30 NNLPPLYFHQVHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALP  109 (345)
Q Consensus        30 ~~~~~l~FH~~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP  109 (345)
                      ...++|+||+.||+||+|++++++|+|.++||||||||+|||++||+|+|||++++.+|+|+|+||||+|||++++.+||
T Consensus         4 ~~~~~l~FH~~~G~nI~L~~~~~~A~R~~sf~~givFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~lP   83 (168)
T 2yue_A            4 GSSGPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFGFTSNDPVTLEGTLP   83 (168)
T ss_dssp             CCCSSCCEEEEECTTEEECCSSCCEEECSCSSCCEEEESSCCCSSCCEEEEEEECCSSSSSCCEEEEESSCGGGTTTCCC
T ss_pred             CCCCCcccccccCCCeEECCCCcEEEecccCCceEEEECCCCcCCCEEEEEEEeecCCcceeEEEeeeecCHHHcCCCCC
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999976789


Q ss_pred             CCCCCCcccccceeEecccccccCCCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCceEEEEeccCCceEEEEecCc
Q psy269          110 RYVCPDLTNKPGYWAKALAERFADQETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNSTAIQLIDSR  189 (345)
Q Consensus       110 ~~a~pdL~~~~~~W~~~~~~~~~~~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t~~V~ll~~~  189 (345)
                      ++|||||.++++||+++++++|+..|++|+||++++|+|||+|||+++|+++++||+++||||||||||+|+||+|++++
T Consensus        84 ~~a~~dL~~~~~~W~~~l~~~~~~~g~~l~f~v~~~G~l~~~iNg~~~g~~~~~V~~~~pLwavvDvyG~t~~V~il~~~  163 (168)
T 2yue_A           84 KYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSR  163 (168)
T ss_dssp             SSSSSHHHHSTTBCCEECCSTTCCSSCEEEEEECTTSEEEEEESSCEEEEEEECCCCSSCCEEEEECCSSCSEEEEECHH
T ss_pred             CcCchHHhcCCCEEEEEeccccccCCCEEEEEEcCCCEEEEEECCCccEEEEcCCCCCCceEEEEEccCCeEEEEEecce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             c
Q psy269          190 A  190 (345)
Q Consensus       190 ~  190 (345)
                      .
T Consensus       164 ~  164 (168)
T 2yue_A          164 I  164 (168)
T ss_dssp             H
T ss_pred             e
Confidence            3

>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=100.00  E-value=4.9e-47  Score=336.24  Aligned_cols=147  Identities=30%  Similarity=0.525  Sum_probs=136.8

Q ss_pred             CCcccccCCCCceEEecCCeeEEec---ccCCCeEEEcCCcCCCCCEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCC
Q psy269           33 PPLYFHQVHGENVRVSRDGTVAKRY---ESFCKGVAFSSRPVKINEKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALP  109 (345)
Q Consensus        33 ~~l~FH~~~G~nV~Ls~~~~~A~R~---~sf~~giVFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP  109 (345)
                      .+++||+.||+||+|++++++|+|.   ++||||||||+|||++||+|+|||++++.+|+|+|+||||+|||++++  ||
T Consensus         5 ~~l~FH~~hG~nI~L~~~~~~A~R~~~~~~f~~givFS~rPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~--lP   82 (170)
T 2e63_A            5 SSGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLD--FP   82 (170)
T ss_dssp             CSSCCCSCCCSSEEECSSSCEEEESCTTTCSCSCCEEEEEEECTTCEEEEEEEEECCSSCCCCEEEEESSCTTSCC--CC
T ss_pred             cccccccccCCCeEECCCCeEEEeCCCCcccCceEEEECCCCCCCCEEEEEEEeecCCcceeEEEEEEccChhhcc--CC
Confidence            4689999999999999999999998   699999999999999999999999999999999999999999999997  69


Q ss_pred             CCCCCCcccccceeEe----------cccccccC------CCcEEEEEEcCCceEEEEEcCCcceeeeecCCCCCceEEE
Q psy269          110 RYVCPDLTNKPGYWAK----------ALAERFAD------QETVLFYYVTAAGDVHFGINGEEKGVFFTGVETRGPLWAM  173 (345)
Q Consensus       110 ~~a~pdL~~~~~~W~~----------~~~~~~~~------~g~~l~~~~~~~G~l~~~VNG~~~G~~~~~V~~~~pLwAv  173 (345)
                      +++ ++|  +++||+.          .++|+|+.      .||+|+||++++|+|||+|||+++|+++++|+  +|||||
T Consensus        83 ~~~-~~L--~~~~Wv~~~~~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~~G~l~~~iNg~~~g~~~~~ip--~~Lwav  157 (170)
T 2e63_A           83 SSA-TGL--KGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLP--PRVWAV  157 (170)
T ss_dssp             SSG-GGC--CSSEEEESSSEEEESSCEEEESCSSCGGGCCSSCCEEEEECTTSCEEEEESSCEEEEEECCCC--SCEEEE
T ss_pred             CCh-hhC--CCCeEEEeccccccCCcccchhccccccccCCCCEEEEEEcCCcEEEEEECCccceeeEcCCC--CcEEEE
Confidence            986 788  4599983          45677874      89999999999999999999999999999887  699999


Q ss_pred             EeccCCceEEEEe
Q psy269          174 FDIYGNSTAIQLI  186 (345)
Q Consensus       174 vDvYG~t~~V~ll  186 (345)
                      |||||+|+||+|+
T Consensus       158 vDvyG~t~~V~iv  170 (170)
T 2e63_A          158 VDLYGKCTQITVL  170 (170)
T ss_dssp             EECCTTEEEEEEC
T ss_pred             EEccCCEEEEEEC
Confidence            9999999999986

>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}

Probab=99.88  E-value=4.2e-23  Score=182.39  Aligned_cols=81  Identities=32%  Similarity=0.601  Sum_probs=76.8

Q ss_pred             CCCCccccCCCCcEEEcCCCeeEEeccCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCCCC
Q psy269          259 LVPLPFHRTIGRNVRLSNDRTIASRRDTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSVFL  338 (345)
Q Consensus       259 ~~~l~FH~~~G~~V~Ls~~~~~A~R~~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~Lp  338 (345)
                      ..+|+||+.||+||+|++++++|+|. ++|++|||||+|||+++|+|+|||++.+.+|+|+|+||||+|||++|+. +||
T Consensus         6 ~~~l~FH~~~G~nI~L~~~~~~A~R~-~sf~~givFS~RPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~-~lP   83 (168)
T 2yue_A            6 SGPLQFHSVHGDNIRISRDGTLARRF-ESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFGFTSNDPVTLEG-TLP   83 (168)
T ss_dssp             CSSCCEEEEECTTEEECCSSCCEEEC-SCSSCCEEEESSCCCSSCCEEEEEEECCSSSSSCCEEEEESSCGGGTTT-CCC
T ss_pred             CCCcccccccCCCeEECCCCcEEEec-ccCCceEEEECCCCcCCCEEEEEEEeecCCcceeEEEeeeecCHHHcCC-CCC
Confidence            57899999999999999999999998 7999999999999999999999999999999999999999999999986 788


Q ss_pred             ccc
Q psy269          339 LSS  341 (345)
Q Consensus       339 ~~~  341 (345)
                      .+.
T Consensus        84 ~~a   86 (168)
T 2yue_A           84 KYA   86 (168)
T ss_dssp             SSS
T ss_pred             CcC
Confidence            743

>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=9.7e-22  Score=173.95  Aligned_cols=79  Identities=27%  Similarity=0.441  Sum_probs=74.2

Q ss_pred             CCCCccccCCCCcEEEcCCCeeEEec--cCCCCCeEEEeCCCCCCCCeEEEEEeeeCCCcccceEEeeeeeCCCCCCCCC
Q psy269          259 LVPLPFHRTIGRNVRLSNDRTIASRR--DTEFSQGYVFTGRPVQLGEKIVIQVLETESRYYGALALGLTSCNPASLKPSV  336 (345)
Q Consensus       259 ~~~l~FH~~~G~~V~Ls~~~~~A~R~--~~~f~~glVfS~RPL~~~E~~~vrI~~~~~~w~GsL~~GvT~~~P~~L~~~~  336 (345)
                      ...++||+.||+||+|++++++|+|.  ..+|++|||||+|||+++|+|+|||++.+..|+|+|+||||+|||++|+   
T Consensus         4 ~~~l~FH~~hG~nI~L~~~~~~A~R~~~~~~f~~givFS~rPl~~~E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~---   80 (170)
T 2e63_A            4 GSSGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLD---   80 (170)
T ss_dssp             CCSSCCCSCCCSSEEECSSSCEEEESCTTTCSCSCCEEEEEEECTTCEEEEEEEEECCSSCCCCEEEEESSCTTSCC---
T ss_pred             ccccccccccCCCeEECCCCeEEEeCCCCcccCceEEEECCCCCCCCEEEEEEEeecCCcceeEEEEEEccChhhcc---
Confidence            35689999999999999999999998  5899999999999999999999999999999999999999999999997   


Q ss_pred             CCcc
Q psy269          337 FLLS  340 (345)
Q Consensus       337 Lp~~  340 (345)
                      ||.+
T Consensus        81 lP~~   84 (170)
T 2e63_A           81 FPSS   84 (170)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            6654

>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}

Probab=97.92  E-value=0.00019  Score=64.92  Aligned_cols=137  Identities=14%  Similarity=0.255  Sum_probs=94.3

Q ss_pred             ccccc-CCCCceEEecCCeeEEecccCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCC
Q psy269           35 LYFHQ-VHGENVRVSRDGTVAKRYESFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYV  112 (345)
Q Consensus        35 l~FH~-~~G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a  112 (345)
                      +.+-+ .+..++.|++|+.++++...+  +-|.++.++..|- .|||+|.+..  -.|.++||+.+.+ ..+.. ++   
T Consensus        13 v~ld~~d~~~~l~ls~d~l~v~~~~~~--~~vra~~~v~~G~~YfEV~v~~~~--~~~~~~iG~a~~~-~~~~~-~~---   83 (213)
T 3toj_A           13 VLLALHDRAPQLKISDDRLTVVGEKGY--SMVRASHGVRKGAWYFEITVDEMP--PDTAARLGWSQPL-GNLQA-PL---   83 (213)
T ss_dssp             CCEEEEEECTTSEECTTSSEEECCSSC--EEEEESCCBSSEEEEEEEEEEECC--TTCEEEEEEECTT-SCTTS-CT---
T ss_pred             EEechhhCCCCEEEcCCCcEEEeCCce--eEEEeCCCccCCeEEEEEEEeecC--CCceEEEEeccCC-ccccc-CC---
Confidence            44444 578899999999999985443  6788999998764 4578877542  3578999998753 11211 11   


Q ss_pred             CCCcccccceeEe----------ccccccc---CCCcEEEEEEcCC---------ceEEEEEcCCcceeeeecCCCCCce
Q psy269          113 CPDLTNKPGYWAK----------ALAERFA---DQETVLFYYVTAA---------GDVHFGINGEEKGVFFTGVETRGPL  170 (345)
Q Consensus       113 ~pdL~~~~~~W~~----------~~~~~~~---~~g~~l~~~~~~~---------G~l~~~VNG~~~G~~~~~V~~~~pL  170 (345)
                          -.....|+.          ...+.|.   ..||+||+.++-+         |+|.|+.||+..|+++.++.. ++|
T Consensus        84 ----G~d~~S~gy~~~~G~~~h~~~~~~yg~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF~~~~~-~~l  158 (213)
T 3toj_A           84 ----GYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAYKDIFE-GVY  158 (213)
T ss_dssp             ----TSSTTEEEEETTTTCEEETTEEECCSCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEEESCCS-SCB
T ss_pred             ----CCCCCcEEEECCCCeEEeCCcCcccCCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeEEcCCC-CcE
Confidence                111234443          1122343   5789999999743         799999999999999998864 489


Q ss_pred             EEEEeccCCceEEEEe
Q psy269          171 WAMFDIYGNSTAIQLI  186 (345)
Q Consensus       171 wAvvDvYG~t~~V~ll  186 (345)
                      |..|-++.. .+|++-
T Consensus       159 yPavsl~~~-~~v~~N  173 (213)
T 3toj_A          159 FPAISLYKS-CTVSIN  173 (213)
T ss_dssp             EEEEEEESS-CEEEEE
T ss_pred             EEEEEcCCC-CEEEEE
Confidence            999998753 346654

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}

Probab=97.86  E-value=0.00051  Score=59.99  Aligned_cols=132  Identities=17%  Similarity=0.211  Sum_probs=89.4

Q ss_pred             CCceEEecCCeeEEecccCCCeEEEcCCcCCCC-CEEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCccccc
Q psy269           42 GENVRVSRDGTVAKRYESFCKGVAFSSRPVKIN-EKVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKP  120 (345)
Q Consensus        42 G~nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~-E~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~  120 (345)
                      ..+|.++++..+.... +..-+.|.++.|+..+ -.|||+|.+...  .|.++||+.+.+ ..+. .+|-.       ..
T Consensus         8 ~~~l~~~~d~l~~~~~-~~~~~~vra~~p~~~g~~YfEv~i~~~~~--~~~~~IG~a~~~-~~~~-~~~G~-------d~   75 (171)
T 2yyo_A            8 FKHILVDGDTLSYHGN-SGEVGCYVASRPLTKDSNYFEVSIVDSGV--RGTIAVGLVPQY-YSLD-HQPGW-------LP   75 (171)
T ss_dssp             EESEEEETTEEEECCC-SSCCEEEECSSCCCSSSCEEEEEEEEETT--TCCCEEEEECTT-CCTT-SCTTS-------ST
T ss_pred             cceEEEcCCEEEEeCC-CCceeEEEECCCCCCCCEEEEEEEEECCC--CcEEEEEecCCC-CCCc-cCCCc-------cC
Confidence            3467787775554432 3345889999999776 467898887643  689999998843 2222 12211       11


Q ss_pred             ceeEec-----------cccccc---CCCcEEEEEEcCC------ceEEEEEcCCcceeeeecCCCCCceEEEEeccCCc
Q psy269          121 GYWAKA-----------LAERFA---DQETVLFYYVTAA------GDVHFGINGEEKGVFFTGVETRGPLWAMFDIYGNS  180 (345)
Q Consensus       121 ~~W~~~-----------~~~~~~---~~g~~l~~~~~~~------G~l~~~VNG~~~G~~~~~V~~~~pLwAvvDvYG~t  180 (345)
                      ..|+..           ..+.|.   ..||+|++.++.+      ++|+|..||+..|+++.++.. .+||..|-++..-
T Consensus        76 ~S~gy~~~dG~~~~~~~~~~~yg~~f~~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~~~~-~~lyPaV~l~~~g  154 (171)
T 2yyo_A           76 DSVAYHADDGKLYNGRAKGRQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSP-DGLFPAVGMHSLG  154 (171)
T ss_dssp             TCEEEETTTCCEESSSSCCBCCSCCCCTTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEESSCS-SSCEEEEEECSTT
T ss_pred             CEEEEEcCCCeEEeCCCCCCcCCCCCCCCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecCCcC-CCEEEEEEEecCC
Confidence            234321           123343   4799999999864      999999999999999988864 5899999998633


Q ss_pred             eEEEEe
Q psy269          181 TAIQLI  186 (345)
Q Consensus       181 ~~V~ll  186 (345)
                      .+|++-
T Consensus       155 ~~v~vN  160 (171)
T 2yyo_A          155 EEVRLH  160 (171)
T ss_dssp             EEEEEE
T ss_pred             CEEEEE
Confidence            456554

>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A

Probab=97.58  E-value=0.0017  Score=58.71  Aligned_cols=143  Identities=15%  Similarity=0.182  Sum_probs=93.7

Q ss_pred             Cccccc-CCCCceEEecCCeeEEec---ccCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRY---ESFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYAL  108 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~---~sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~L  108 (345)
                      ++.+-+ ....++.|++|++++++.   +.|  ..|.+..++..|. .+||+|.+...  .+...|||...+-..-... 
T Consensus        43 ~~tlDp~ta~~~L~lSed~~~v~~~~~~~~~--~~Vl~~~~~~sGrhYWEV~v~~~~~--g~~~~vGv~~~~~~r~~~g-  117 (217)
T 3emw_A           43 RHGWNPKDCSENIEVKEGGLYFERRPVAQST--DGARGKRGYSRGLHAWEISWPLEQR--GTHAVVGVATALAPLQTDH-  117 (217)
T ss_dssp             HTSEEEEEECTTEEEEGGGTEEEECCBSSCE--EEEEESCCBSSSEEEEEEECCGGGC--TTCCEEEEECTTSCCEESS-
T ss_pred             ceEeCcccCCCCEEECCCCeEEEECccCCCC--CEEEeCCCccCccEEEEEEEcccCC--CCceeEEEEcCccccccCC-
Confidence            455555 578899999999999874   344  4788999998775 34776653211  1357899977543210000 


Q ss_pred             CCCCCCCcccccceeEecc--------c-----cccc--------CCCcEEEEEEc-CCceEEEEEcCCcceeeeecCCC
Q psy269          109 PRYVCPDLTNKPGYWAKAL--------A-----ERFA--------DQETVLFYYVT-AAGDVHFGINGEEKGVFFTGVET  166 (345)
Q Consensus       109 P~~a~pdL~~~~~~W~~~~--------~-----~~~~--------~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~  166 (345)
                        .. ..+-...++|....        .     ..|.        ..+++|++++| +.|.|.|++||+..|++++++. 
T Consensus       118 --~~-~~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~~~-  193 (217)
T 3emw_A          118 --YA-ALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLK-  193 (217)
T ss_dssp             --SC-CCTTSSTTEEEEETTTCBEESSCCSSCCCBSSSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCT-
T ss_pred             --cc-ccccCCCCEEEEEeCCCcEEeCCcccCCccccccccccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEECCC-
Confidence              00 01122235665321        0     1232        56789999998 7899999999999999999877 


Q ss_pred             CCceEEEEecc-CCceEEEEe
Q psy269          167 RGPLWAMFDIY-GNSTAIQLI  186 (345)
Q Consensus       167 ~~pLwAvvDvY-G~t~~V~ll  186 (345)
                      +++||..|-++ |.| +|+|+
T Consensus       194 ~~~LyP~~sl~~g~~-~v~l~  213 (217)
T 3emw_A          194 GRTLYPAVSAVWGQC-QVRIR  213 (217)
T ss_dssp             TCCBEEEEEECSTTC-EEEEE
T ss_pred             CCEEEEEEEeccCCc-EEEEE
Confidence            46899999875 544 46664

>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A

Probab=97.14  E-value=0.013  Score=52.36  Aligned_cols=145  Identities=14%  Similarity=0.187  Sum_probs=91.5

Q ss_pred             Cccccc-CCCCceEEecCCe-eEEecc-cCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCC
Q psy269           34 PLYFHQ-VHGENVRVSRDGT-VAKRYE-SFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALP  109 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~-~A~R~~-sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP  109 (345)
                      ++.+.+ ....++.|++|++ +.++.. ...-..|..+.++..|. .+||+|.....  ++..+|||....=..-..   
T Consensus        32 ~~tldp~ta~~~L~lsed~~~~~~~~~~~~~~~~Vlg~~~f~sGrhYWEV~v~~~~~--~~~w~vGV~~~~~~r~~~---  106 (212)
T 2jk9_A           32 LHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQR--GTHAVVGVATADAPLHSV---  106 (212)
T ss_dssp             HTSEEEEEECTTEEEETTEEEEEEECCBTTEEEEEEESCCBCSSEEEEEEECCGGGC--TTCCEEEEECTTSCCEEE---
T ss_pred             ccccChhhcCCceEEeCCCeEEEEECCCCCccceEEcCCCccCCeEEEEEEEecccC--CCcEEEEEEcCCcccccc---
Confidence            355665 5678999999986 444431 22235788999998775 45777753211  234469997644221000   


Q ss_pred             CCCCCCcccccceeEeccc--------c-----ccc---------CCCcEEEEEEc-CCceEEEEEcCCcceeeeecCCC
Q psy269          110 RYVCPDLTNKPGYWAKALA--------E-----RFA---------DQETVLFYYVT-AAGDVHFGINGEEKGVFFTGVET  166 (345)
Q Consensus       110 ~~a~pdL~~~~~~W~~~~~--------~-----~~~---------~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~  166 (345)
                      .+ ...+-...++|+....        .     .+.         ..+++||+.+| +.|+|.|++||+..|.+++++. 
T Consensus       107 g~-~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~~-  184 (212)
T 2jk9_A          107 GY-TTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLK-  184 (212)
T ss_dssp             SS-CCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCT-
T ss_pred             Cc-ccccccCCCcEeeECCCCcEEECCcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccCC-
Confidence            00 0111223456754320        0     121         35799999998 7899999999999999999876 


Q ss_pred             CCceEEEEec-cCCceEEEEe
Q psy269          167 RGPLWAMFDI-YGNSTAIQLI  186 (345)
Q Consensus       167 ~~pLwAvvDv-YG~t~~V~ll  186 (345)
                      +++||..|-+ +|.+ .|+|.
T Consensus       185 ~~~l~P~f~l~~g~~-~v~l~  204 (212)
T 2jk9_A          185 GKKLYPVVSAVWGHC-EIRMR  204 (212)
T ss_dssp             TCCBEEEEEECCTTC-EEEEE
T ss_pred             CCEEeeEEEEEcCCc-EEEEE
Confidence            5699999998 4755 36664

>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22

Probab=96.71  E-value=0.007  Score=54.82  Aligned_cols=143  Identities=14%  Similarity=0.149  Sum_probs=92.2

Q ss_pred             Cccccc-CCCCceEEecCCeeEEec---ccCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRY---ESFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYAL  108 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~---~sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~L  108 (345)
                      ++.+.+ ....++.|++|++++++.   +.|.  .|.++.++..|. .+||+|....  -++...|||....-..-+.  
T Consensus        40 ~~tLDp~ta~~~L~lSed~~~v~~~~~~~~~~--~Vlg~~~f~sGrhYWEV~V~~~~--~~~~w~vGV~~~s~~~~r~--  113 (226)
T 2afj_A           40 HHGWNPKDCSENIDVKEGGLCFERRPVAQSTD--GVRGKRGYSRGLHAWEISWPLEQ--RGTHAVVGVATALAPLQAD--  113 (226)
T ss_dssp             HHSSCCSSSCCSSEEETTTTEEECSSCTTTSS--SEEECCCCCCSEEEEEEECCCCS--SSCCCEEEEEESSCCCSSC--
T ss_pred             ccEEccccCCCCEEEeCCCEEEEECCCCCCcC--eEEECCCccCCEEEEEEEEeccC--CCCCEEEEecCCccccccc--
Confidence            355555 678899999999988863   3443  788999998885 4577765421  1345679997754320000  


Q ss_pred             CCCCCCCcccccceeEeccc-------------ccc--------cCCCcEEEEEEc-CCceEEEEEcCCcceeeeecCCC
Q psy269          109 PRYVCPDLTNKPGYWAKALA-------------ERF--------ADQETVLFYYVT-AAGDVHFGINGEEKGVFFTGVET  166 (345)
Q Consensus       109 P~~a~pdL~~~~~~W~~~~~-------------~~~--------~~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~  166 (345)
                       ... ..+-....+|+....             ..|        -..+++||+.++ +.|+|.|+.||...|.+++++. 
T Consensus       114 -~~~-~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~~~-  190 (226)
T 2afj_A          114 -HYA-ALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLK-  190 (226)
T ss_dssp             -SSS-CCCCCSCEEEEEEGGGTSTTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHHHH-
T ss_pred             -ccc-ccccCCCCcEEEEcCCCeEEECccccCcccccccccCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEcCC-
Confidence             000 011223456765421             012        135889999998 7899999999999988888765 


Q ss_pred             CCceEEEEecc-CCceEEEEe
Q psy269          167 RGPLWAMFDIY-GNSTAIQLI  186 (345)
Q Consensus       167 ~~pLwAvvDvY-G~t~~V~ll  186 (345)
                      +++||..|-+. |.+ .|+|.
T Consensus       191 ~~~L~P~f~l~~g~~-~v~l~  210 (226)
T 2afj_A          191 GRTLYPSVSAVWGQC-QVRIR  210 (226)
T ss_dssp             HHCCEEEEEECCTTS-CCEEE
T ss_pred             CCEEEEEEEcccCCC-EEEEE
Confidence            45899999974 654 24443

>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*

Probab=95.08  E-value=1.4  Score=38.69  Aligned_cols=132  Identities=16%  Similarity=0.258  Sum_probs=82.0

Q ss_pred             Cccccc-CCCCceEEecCCeeEEecc----------cCCC-eEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRYE----------SFCK-GVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTAND  100 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~~----------sf~~-giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~d  100 (345)
                      ++.+.+ +...++.|++|++.+++..          .|.. ..|+..+.+..|. .+||++..     ++.-.|||+...
T Consensus        10 ~vtLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~-----~~~w~vGV~~~s   84 (188)
T 2vok_A           10 HITLDRNTANSWLIISKDRRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVTQ-----KEAWDLGVCRDS   84 (188)
T ss_dssp             CCCBCGGGSCTTEEECTTSCEEEECSSCCCCCCCTTSCCSSSEEEBSCCBSSSEEEEEEECTT-----CSCEEEEEEETT
T ss_pred             ceEECCccCCCCeEECCCCCEEEECCccCCCCCCccceeeeccccccCcccCCCeEEEEEecC-----CceEEEEEeeCC
Confidence            455665 5667999999999998732          3543 4788999998886 45887743     223578987643


Q ss_pred             CCCcCcCCCCCCCCCcccccceeEecccc-cc------------cCCCcEEEEEEc-CCceEEEEEcCCcc-eeeee--c
Q psy269          101 PAHLKYALPRYVCPDLTNKPGYWAKALAE-RF------------ADQETVLFYYVT-AAGDVHFGINGEEK-GVFFT--G  163 (345)
Q Consensus       101 P~~l~~~LP~~a~pdL~~~~~~W~~~~~~-~~------------~~~g~~l~~~~~-~~G~l~~~VNG~~~-G~~~~--~  163 (345)
                      -.. ....      .|....++|+..+.. .|            .....+||+.+| +.|.|-|+ |-.++ -.+.+  .
T Consensus        85 i~R-kg~~------~~~~~~~~W~l~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~G~lSFY-~v~~~~~~I~tF~~  156 (188)
T 2vok_A           85 VQR-KGQF------SLSPENGFWTIWLWQDSYEAGTSPQTTLHIQVPPCQIGIFVDYEAGVVSFY-NITDHGSLIYTFSE  156 (188)
T ss_dssp             CCC-SSCC------CCSTTTTEEEEEEETTEEEECSSSCEEECCSSCCSEEEEEEETTTTEEEEE-ETTTTTEEEEEECS
T ss_pred             cCC-CCcc------ccCCCCCEEEEEEECCEEEEEeCCccCEecCCCCCEEEEEEEcCCCEEEEE-ECCCCCeeeEEecC
Confidence            211 1111      133445778655421 11            124578999998 77999887 33444 33332  2


Q ss_pred             CCCCCceEEEEeccC
Q psy269          164 VETRGPLWAMFDIYG  178 (345)
Q Consensus       164 V~~~~pLwAvvDvYG  178 (345)
                      +.-++||+.+|-++.
T Consensus       157 ~~Fs~pL~P~F~~~~  171 (188)
T 2vok_A          157 CVFAGPLRPFFNVGF  171 (188)
T ss_dssp             CCCCSCEEEEEECCC
T ss_pred             CCCCCCEEeEEEecc
Confidence            234689999998874

>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}

Probab=95.05  E-value=0.29  Score=42.96  Aligned_cols=133  Identities=15%  Similarity=0.212  Sum_probs=78.8

Q ss_pred             ceEEecCCeeEEecccCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCCCCcccccce
Q psy269           44 NVRVSRDGTVAKRYESFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVCPDLTNKPGY  122 (345)
Q Consensus        44 nV~Ls~~~~~A~R~~sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~pdL~~~~~~  122 (345)
                      ++.||+|++.++.....   -|....-+..|. .+||+|..     ++.-.+||.......-.......  -.+....+|
T Consensus        23 ~l~lSed~r~Vr~~~~~---~VLG~~~ftsGrHYWEVeV~~-----~~~W~vGV~~~~~~r~~~~~~~~--~~~~~~~g~   92 (186)
T 3uv9_A           23 HAVIAEDKRQVSSRAGT---GVLGSQSITSGKHYWEVDVSK-----KSAWILGVCAGFQSDAMYNIEQN--ENYQPKYGY   92 (186)
T ss_dssp             CCEECTTSSCEECCCSS---CEECSSCBCSSEEEEEEECTT-----CSCEEEEEESCSTTTTTTTHHHH--TCCCGGGTE
T ss_pred             CceECCCCCEEeecCCC---cCcCCCCCCCCCEEEEEEEcC-----CCcEEEEEEEEEecccccccCCC--cccCCCCCE
Confidence            57899999988543332   388888888776 44887743     22345788543222110000000  113345578


Q ss_pred             eEeccccc--c---------------------cCCCcEEEEEEc-CCceEEEEEcCCccee-eee--cCCCCCceEEEEe
Q psy269          123 WAKALAER--F---------------------ADQETVLFYYVT-AAGDVHFGINGEEKGV-FFT--GVETRGPLWAMFD  175 (345)
Q Consensus       123 W~~~~~~~--~---------------------~~~g~~l~~~~~-~~G~l~~~VNG~~~G~-~~~--~V~~~~pLwAvvD  175 (345)
                      |+..+.+.  |                     ...-.+||+.+| +.|.|-|+ |-.+++. +.+  ...=++|||.+|.
T Consensus        93 W~l~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~p~rVGVfLDye~G~lSFY-nv~d~~~lI~tF~~~~Fs~pL~P~F~  171 (186)
T 3uv9_A           93 WVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVIICPDRVGVFVDYEACTVSFF-NITNHGFLIYKFSQCSFSKPVFPYLN  171 (186)
T ss_dssp             EEEEEETTTEEEEEECCCTTSTTSCEEEECCCSSCCSEEEEEEETTTTEEEEE-ETTTTTEEEEEECSCCCSSCBEEEEE
T ss_pred             EEEEECCCCEEEEEeCCCccccCCCccCcccccccCCEEEEEeecCCCEEEEE-eCCCCceEEEEeCCcCCCCCEEeEEE
Confidence            87643221  1                     122467899998 77999887 6566653 333  3344689999999


Q ss_pred             ccCCceEEEEec
Q psy269          176 IYGNSTAIQLID  187 (345)
Q Consensus       176 vYG~t~~V~ll~  187 (345)
                      +......++|..
T Consensus       172 ~~~~~~plticp  183 (186)
T 3uv9_A          172 PRKCTVPMTLCS  183 (186)
T ss_dssp             CTTCCSCCEECC
T ss_pred             CCCCCceEEEeC
Confidence            976555666654

>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22

Probab=93.58  E-value=3.7  Score=36.32  Aligned_cols=141  Identities=12%  Similarity=0.123  Sum_probs=86.4

Q ss_pred             Cccccc-CCCCceEEecCCeeEEecc----------cCCC-eEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRYE----------SFCK-GVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTAND  100 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~~----------sf~~-giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~d  100 (345)
                      .+.|.+ +...++.|++|++.+++..          .|.. ..|+..+-+..|. .+||++..     ++.-.|||....
T Consensus        11 ~~tLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsSGrHYWEVev~~-----~~~w~vGV~~~s   85 (201)
T 2fbe_A           11 DMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGT-----SQVWDVGVCKES   85 (201)
T ss_dssp             CCCEETTTCCTTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTT-----CSEEEEEEEETT
T ss_pred             eEEECcccCCCceEECCCCcEEEECCccCCCCCCccceeeccceecCccccCCceEEEEEeCC-----CCEEEEEEeeCc
Confidence            456665 5678999999999998732          3443 4788998888776 45787643     133578997643


Q ss_pred             CCCcCcCCCCCCCCCcccccceeEecccc--cc------------cCCCcEEEEEEc-CCceEEEEEcCCcceeeeec--
Q psy269          101 PAHLKYALPRYVCPDLTNKPGYWAKALAE--RF------------ADQETVLFYYVT-AAGDVHFGINGEEKGVFFTG--  163 (345)
Q Consensus       101 P~~l~~~LP~~a~pdL~~~~~~W~~~~~~--~~------------~~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~--  163 (345)
                      -..- ...      .+....+||+..+..  .|            .....+||+.+| +.|.|-|+- -.++-.+.+-  
T Consensus        86 i~Rk-g~~------~~~~~~g~W~l~~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~G~lSFY~-v~~~~~i~tF~~  157 (201)
T 2fbe_A           86 VNRQ-GKI------ELSSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYN-VSDGCHIYTFIE  157 (201)
T ss_dssp             SCCS-SCC------CCCTTTTEEEEEEETTTEEEECSSSCEEECCCTTCCEEEEEEETTTTEEEEEE-TTTTEEEEEECS
T ss_pred             cCCC-Ccc------cccCCCCEEEEEEeCCCEEEEEcCCcccCccCCCCCEEEEEEEcCCCEEEEEe-CCCCceeEEEcC
Confidence            2111 111      123345788765421  11            123568999998 779998873 3444444432  


Q ss_pred             CCCCCceEEEEecc---C-CceEEEEec
Q psy269          164 VETRGPLWAMFDIY---G-NSTAIQLID  187 (345)
Q Consensus       164 V~~~~pLwAvvDvY---G-~t~~V~ll~  187 (345)
                      +.-++||+.+|-+.   | ....++|..
T Consensus       158 ~~Fs~pL~P~F~~~~~~~~~~~~l~ic~  185 (201)
T 2fbe_A          158 IPVCEPWRPFFAHKRGSQDDQSILSICS  185 (201)
T ss_dssp             CCCSSCEEEEEEEECSSSSCCCCEEECC
T ss_pred             CCCCCCEEeEEEecccCCCCCCCEEEeC
Confidence            23468999999875   2 223466654

>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}

Probab=93.23  E-value=3.9  Score=35.77  Aligned_cols=131  Identities=16%  Similarity=0.232  Sum_probs=81.9

Q ss_pred             Cccccc-CCCCceEEecCCeeEEecc----------cCCC-eEEEcCCcCCCCCE-EEEEEEeEcCCcceeeEEeeeecC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRYE----------SFCK-GVAFSSRPVKINEK-VYVKLLEISTNWSGVIRFGFTAND  100 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~~----------sf~~-giVFS~RPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~d  100 (345)
                      .+.|.+ +...++.|++|++.+++..          .|.. ..|+..+.+..|.- +||++..     ++.-.|||....
T Consensus        14 ~~tLDp~TA~~~L~lSed~~~v~~~~~~q~~p~~p~RF~~~~~VLg~~~fssGrHYWEVev~~-----~~~w~vGV~~~s   88 (191)
T 2wl1_A           14 NVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEVEVGD-----KTAWILGACKTS   88 (191)
T ss_dssp             CCEECTTTSCTTEEECTTSCEEEECCTTCCCCCCTTSCSSSCCEEEECCBCSSEEEEEEECTT-----CSCEEEEEEETT
T ss_pred             eeEECCccCCCceEECCCCcEEEECCcCCCCCCCcccccccccccCcccccCCCEEEEEEeCC-----CCEEEEEEeeCC
Confidence            466665 5677999999999988732          2433 46888888877764 5777642     234578997643


Q ss_pred             CCCcCcCCCCCCCCCcccccceeEeccc--ccc------------cCCCcEEEEEEc-CCceEEEEEcCCcceeeee--c
Q psy269          101 PAHLKYALPRYVCPDLTNKPGYWAKALA--ERF------------ADQETVLFYYVT-AAGDVHFGINGEEKGVFFT--G  163 (345)
Q Consensus       101 P~~l~~~LP~~a~pdL~~~~~~W~~~~~--~~~------------~~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~--~  163 (345)
                      -.. ....      .+....+||+..+.  ..|            .....+||+.+| +.|.|-|+ |-.+...+.+  .
T Consensus        89 ~~R-kg~~------~~~~~~~~W~l~~~~~~~y~~~~~~~~~l~~~~~~~rVGVfLDye~G~lSFY-~v~~~~~i~tF~~  160 (191)
T 2wl1_A           89 ISR-KGNM------TLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKRVGIFVDYRVGSISFY-NVTARSHIYTFAS  160 (191)
T ss_dssp             CCS-SSCC------CCCGGGTEEEEEEEETTEEEECCSSCEECCCSSCCSEEEEEEETTTTEEEEE-ETTTTEEEEEECC
T ss_pred             cCC-CCcc------ccCCCCCEEEEEEeCCCEEEEEcCCCccCccccCCcEEEEEEEcCCCEEEEE-ECCCCcceEEeCC
Confidence            211 1111      13344578876532  111            123578999998 77999887 3344444443  2


Q ss_pred             CCCCCceEEEEecc
Q psy269          164 VETRGPLWAMFDIY  177 (345)
Q Consensus       164 V~~~~pLwAvvDvY  177 (345)
                      +.-++||+.+|-+.
T Consensus       161 ~~Fs~pl~P~F~~~  174 (191)
T 2wl1_A          161 CSFSGPLQPIFSPG  174 (191)
T ss_dssp             CCCCSCEEEEEECC
T ss_pred             CCCCCCEEeEEEcc
Confidence            23478999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	345
d2afja1	213	SPRY domain-containing SOCS box protein 2 {Mouse (	98.51
d2fnja1	217	LD34464p {Fruit fly (Drosophila melanogaster) [Tax	98.47
d2fbea1	188	Similar to Ret finger protein-like 1 {Human (Homo	93.79
d2iwgb1	179	52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96	91.93

>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: SPRY domain-containing SOCS box protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=3e-07  Score=80.83  Aligned_cols=142  Identities=14%  Similarity=0.192  Sum_probs=93.7

Q ss_pred             ccc-CCCCceEEecCCeeEEec-ccCCCeEEEcCCcCCCCCE-EEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCCCC
Q psy269           37 FHQ-VHGENVRVSRDGTVAKRY-ESFCKGVAFSSRPVKINEK-VYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRYVC  113 (345)
Q Consensus        37 FH~-~~G~nV~Ls~~~~~A~R~-~sf~~giVFS~RPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~a~  113 (345)
                      |.+ .++.+|.|++++.++.+. ...+...|.+.+++..|.- |||+|.+  ..+.+.+.|||.+.+-. +..  ..+ .
T Consensus        37 wnp~~~~~~i~ls~g~l~~~~~~~~~~~~~v~gt~~~ssGk~YwEv~i~~--~~~~~~~~iGv~~~~~~-~~~--~~~-~  110 (213)
T d2afja1          37 WNPKDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPL--EQRGTHAVVGVATALAP-LQA--DHY-A  110 (213)
T ss_dssp             SCCSSSCCSSEEETTTTEEECSSCTTTSSSEEECCCCCCSEEEEEEECCC--CSSSCCCEEEEEESSCC-CSS--CSS-S
T ss_pred             CChhhcCCCeEEeCCCeEEEeCCccCccccEEECccccCCcEEEEEEEec--cCCcceEEEeEeecccC-ccc--cCc-c
Confidence            555 589999999999887764 3344467999999999976 5787754  34456688999765433 211  111 0


Q ss_pred             CCcccccceeEeccc------------------ccc---cCCCcEEEEEEc-CCceEEEEEcCCcceeeeecCCCCCceE
Q psy269          114 PDLTNKPGYWAKALA------------------ERF---ADQETVLFYYVT-AAGDVHFGINGEEKGVFFTGVETRGPLW  171 (345)
Q Consensus       114 pdL~~~~~~W~~~~~------------------~~~---~~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~~~pLw  171 (345)
                      .-+-.....|.....                  ..|   -..||+|++.+| .+|.|+|++||..+|+++++++. ++||
T Consensus       111 ~~~G~~~~s~g~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGvaLD~d~g~i~F~kNG~~lG~af~~l~~-~~ly  189 (213)
T d2afja1         111 ALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLKG-RTLY  189 (213)
T ss_dssp             CCCCCSCEEEEEEGGGTSTTSSSSCCSCSSSSCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHHHHH-HCCE
T ss_pred             cccccccCCcccccccceEeecccccccCCcCcCccCcccCCCCEEEEEEeCCCCEEEEEECCEEeeeeEECCCC-CeEE
Confidence            001111122332110                  011   136899999998 66999999999999999999873 5799


Q ss_pred             -EEEeccCCceEEEEe
Q psy269          172 -AMFDIYGNSTAIQLI  186 (345)
Q Consensus       172 -AvvDvYG~t~~V~ll  186 (345)
                       ||-++||.|. |+|+
T Consensus       190 P~vs~~~g~~~-~~~~  204 (213)
T d2afja1         190 PSVSAVWGQCQ-VRIR  204 (213)
T ss_dssp             EEEEECCTTSC-CEEE
T ss_pred             EEEEEecCCcE-EEEE
Confidence             5557899876 4443

>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.47  E-value=1.1e-06  Score=77.49  Aligned_cols=143  Identities=11%  Similarity=0.126  Sum_probs=95.0

Q ss_pred             cccc-CCCCceEEecCCeeEEecc--cCCCeEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCCCCcCcCCCCC
Q psy269           36 YFHQ-VHGENVRVSRDGTVAKRYE--SFCKGVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDPAHLKYALPRY  111 (345)
Q Consensus        36 ~FH~-~~G~nV~Ls~~~~~A~R~~--sf~~giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~LP~~  111 (345)
                      ++.+ .+..||.|++++..+...+  +...+-|++..++..|. .+||+|...  .....+.|||.+.+-..-..   .+
T Consensus        25 ~wn~~~~~~~~~ls~~~~~~~~~~~~~~~~~~vrgt~g~ssGk~YWEV~v~~~--~~~~~~~IGV~~~~~~~~~~---~~   99 (217)
T d2fnja1          25 SWNSEDRSLNIFVKEDDKLTFHRHPVAQSTDCIRGKVGLTKGLHIWEIYWPTR--QRGTHAVVGVCTADAPLHSV---GY   99 (217)
T ss_dssp             SEEEEEECTTEEEETTEEEEEEECCCTTEEEEEEESCCBCSSEEEEEEECCGG--GCTTCCEEEEECTTSCSEEE---SS
T ss_pred             cCChhcCCCCEEEeCCCceEEEeCCccccCCeEEEcccccCCcEEEEEEEecC--CCCCeeEEEEEecccCcccC---Cc
Confidence            3444 5899999999987765433  33345799999999997 578888643  33345679998765322111   11


Q ss_pred             CCCCcccccceeEecccc-------------------ccc---CCCcEEEEEEc-CCceEEEEEcCCcceeeeecCCCCC
Q psy269          112 VCPDLTNKPGYWAKALAE-------------------RFA---DQETVLFYYVT-AAGDVHFGINGEEKGVFFTGVETRG  168 (345)
Q Consensus       112 a~pdL~~~~~~W~~~~~~-------------------~~~---~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~~V~~~~  168 (345)
                       +.-+-.....|......                   .+.   ..||+|++.+| .+|.|.|++||+..|+++++++. +
T Consensus       100 -~~~~G~~~~s~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~gDvIGV~LD~d~gtLsF~kNG~~lGvAf~~l~~-~  177 (217)
T d2fnja1         100 -QSLVGSTEQSWGWDLGRNKLYHDSKNCAGVTYPAILKNDEAFLVPDKFLVALDMDEGTLSFIVDQQYLGIAFRGLRG-K  177 (217)
T ss_dssp             -CCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTCCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCTT-C
T ss_pred             -cccccCCCCcceEecCCCEEEecCCCccccccCcccccCCccCCCCEEEEEEeCCCCEEEEEECCEEeeEEEeCCCC-C
Confidence             11122223445432110                   111   35899999998 78999999999999999999864 5


Q ss_pred             ceE-EEEeccCCceEEEEe
Q psy269          169 PLW-AMFDIYGNSTAIQLI  186 (345)
Q Consensus       169 pLw-AvvDvYG~t~~V~ll  186 (345)
                      +|| ||-.+||.| +|+|.
T Consensus       178 ~lyP~vs~~~~~~-~v~~~  195 (217)
T d2fnja1         178 KLYPIVSAVWGHC-EITMR  195 (217)
T ss_dssp             CBEEEEEECCTTC-EEEEE
T ss_pred             eEEEEEEeccCCc-EEEEE
Confidence            899 555689987 46665

>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: Similar to Ret finger protein-like 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=1  Score=37.24  Aligned_cols=131  Identities=14%  Similarity=0.147  Sum_probs=84.9

Q ss_pred             Cccccc-CCCCceEEecCCeeEEec----------ccCCCe-EEEcCCcCCCCCE-EEEEEEeEcCCcceeeEEeeeecC
Q psy269           34 PLYFHQ-VHGENVRVSRDGTVAKRY----------ESFCKG-VAFSSRPVKINEK-VYVKLLEISTNWSGVIRFGFTAND  100 (345)
Q Consensus        34 ~l~FH~-~~G~nV~Ls~~~~~A~R~----------~sf~~g-iVFS~RPl~~~E~-~~v~I~~~~~~wsG~l~~GvT~~d  100 (345)
                      ++.|-+ +.-.++.||+|+++++..          +.|... .|+.+..+..|.- +||+|.+     +..-.|||+..+
T Consensus        11 dvtLDp~TAh~~L~lS~d~~~V~~~~~~~~~p~~p~rF~~~~~VLg~~~fssGrHYWEV~V~~-----~~~w~vGV~~~s   85 (188)
T d2fbea1          11 DMTFDVDTANNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGT-----SQVWDVGVCKES   85 (188)
T ss_dssp             CCCEETTTCCTTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSEEEEEEECTT-----CSEEEEEEEETT
T ss_pred             eeEcCCCCCCCCEEEccCCcEEEECCcCCCCCCCcccccceeeccccccccCCCEEEEEEeee-----CCeEEEEEEeCC
Confidence            455775 677899999999888752          235444 5999999988864 6887743     224568998754


Q ss_pred             CCCcCcCCCCCCCCCcccccceeEeccccc--------------ccCCCcEEEEEEc-CCceEEEEEcCCcceeeee--c
Q psy269          101 PAHLKYALPRYVCPDLTNKPGYWAKALAER--------------FADQETVLFYYVT-AAGDVHFGINGEEKGVFFT--G  163 (345)
Q Consensus       101 P~~l~~~LP~~a~pdL~~~~~~W~~~~~~~--------------~~~~g~~l~~~~~-~~G~l~~~VNG~~~G~~~~--~  163 (345)
                      =..-. .+.      +....++|...+...              ....-.+||+.+| +.|.|-|+ |-+++..+.+  .
T Consensus        86 v~Rk~-~~~------~~~~~~~w~l~~~~~~~~~~~~~~~~~l~~~~~~~rVGV~LDye~G~lSFy-n~~~~~~L~tF~~  157 (188)
T d2fbea1          86 VNRQG-KIE------LSSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFY-NVSDGCHIYTFIE  157 (188)
T ss_dssp             SCCSS-CCC------CCTTTTEEEEEEETTTEEEECSSSCEEECCCTTCCEEEEEEETTTTEEEEE-ETTTTEEEEEECS
T ss_pred             cCcCc-ccc------cCCCCCCEEEEecCCcEEEecCCCceeeccCCCCCEEEEEEEcCCCEEEEE-eCCCCcEEEEECC
Confidence            22111 121      233456886532211              1223568999998 77888875 6666666654  3


Q ss_pred             CCCCCceEEEEecc
Q psy269          164 VETRGPLWAMFDIY  177 (345)
Q Consensus       164 V~~~~pLwAvvDvY  177 (345)
                      +.-++||+.+|-+.
T Consensus       158 ~~F~~pl~P~F~~~  171 (188)
T d2fbea1         158 IPVCEPWRPFFAHK  171 (188)
T ss_dssp             CCCSSCEEEEEEEE
T ss_pred             CCCCCCEeCeEECc
Confidence            45578999999885

>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: 52 kDa Ro protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.93  E-value=2.6  Score=34.30  Aligned_cols=130  Identities=15%  Similarity=0.229  Sum_probs=80.2

Q ss_pred             ccccc-CCCCceEEecCCeeEEecc----------cCCC-eEEEcCCcCCCCC-EEEEEEEeEcCCcceeeEEeeeecCC
Q psy269           35 LYFHQ-VHGENVRVSRDGTVAKRYE----------SFCK-GVAFSSRPVKINE-KVYVKLLEISTNWSGVIRFGFTANDP  101 (345)
Q Consensus        35 l~FH~-~~G~nV~Ls~~~~~A~R~~----------sf~~-giVFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP  101 (345)
                      +.|-+ +.-.++.|++|++.+++..          .|.. ..|+....+..|. .+||+|..     +..-.|||+...-
T Consensus         3 lTLDp~TAh~~L~lS~d~~~V~~~~~~~~~p~~p~RF~~~~~VLg~~~f~sG~HYWEVeV~~-----~~~w~vGV~~~s~   77 (179)
T d2iwgb1           3 ITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTG-----KEAWDLGVCRDSV   77 (179)
T ss_dssp             CCBCTTTCCTTEEECTTSCEEEECSSCCCCCCCTTSCCSSSCEEBSCCBSSSEEEEEEECTT-----CSCEEEEEEETTC
T ss_pred             eEECCCcCCCCEEEcCCCCEEEECCcCcCCCCCcccccccccccccccccCCCEEEEEEEee-----CCeEEEEEEcCcc
Confidence            45554 5678899999999998731          2543 4689999998886 45787632     2234678876543


Q ss_pred             CCcCcCCCCCCCCCcccccceeEeccccc--------------ccCCCcEEEEEEc-CCceEEEEEcCCcce-eeee--c
Q psy269          102 AHLKYALPRYVCPDLTNKPGYWAKALAER--------------FADQETVLFYYVT-AAGDVHFGINGEEKG-VFFT--G  163 (345)
Q Consensus       102 ~~l~~~LP~~a~pdL~~~~~~W~~~~~~~--------------~~~~g~~l~~~~~-~~G~l~~~VNG~~~G-~~~~--~  163 (345)
                      ..-. .+      .|....++|+..+.+.              ....-.+||+++| +.|.|.|+ |-.+++ .+.+  .
T Consensus        78 ~Rk~-~~------~~~~~~~~W~l~~~~~~~~~~~~~~~~~l~~~~~~~riGV~LD~e~G~lsFy-~v~~~~~li~tf~~  149 (179)
T d2iwgb1          78 RRKG-HF------LLSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFY-NITDHGSLIYSFSE  149 (179)
T ss_dssp             CCSS-CC------CCCTTTTEEEEEEETTTEEEECCSSCEEECCSSCCSEEEEEEETTTTEEEEE-ETTTTTEEEEEECC
T ss_pred             CcCc-cc------ccCCCCCEEEEEEeCCceEEEecCCCEeEccccCccEEEEEEecCCCEEEEE-eCCCCCeEEEEeCC
Confidence            3211 11      1334557887543211              1122357999998 77888887 534443 3332  2


Q ss_pred             CCCCCceEEEEecc
Q psy269          164 VETRGPLWAMFDIY  177 (345)
Q Consensus       164 V~~~~pLwAvvDvY  177 (345)
                      ..=++|||.+|.++
T Consensus       150 ~~F~~pl~P~F~~~  163 (179)
T d2iwgb1         150 CAFTGPLRPFFSPG  163 (179)
T ss_dssp             CCCCSCEEEEEECC
T ss_pred             cCCCCCeECeEECc
Confidence            33468999999986