Diaphorina citri psyllid: psy2762


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRAM
cccccccHHccccccEEEEEEcccccEEEEccccccEEEEEcccccccccccccccEEEEEEEcccccEEEEEECccccccEEEEECccccEEEEEccccCEEEEEEECcccccEEEEEEcccccccEEEEECccccEEEEEEEcccccEEEEEEccccccEEEEEEccccccccccccccccccccccEEEEEcccccEEEEEcccccEEEEEccccccccEEEEEEcccccccccEEEEECccccEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEECccccEEEEEcccccEEEEEEEccccccEECc
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT**G********
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MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRAM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein SEC13 homolog Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.very confidentQ5XFW8
Protein SEC13 homolog Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.very confidentQ9D1M0
Protein transport protein SEC13 Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.very confidentQ54DS8

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolconfidentGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0000776 [CC]kinetochoreconfidentGO:0043234, GO:0005575, GO:0005622, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0000775, GO:0044422
GO:0070971 [CC]endoplasmic reticulum exit siteconfidentGO:0005737, GO:0005575, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044432, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005643 [CC]nuclear poreconfidentGO:0005635, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0031224, GO:0044446, GO:0046930, GO:0016021, GO:0016020, GO:0031967, GO:0012505, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044428, GO:0044424, GO:0044425, GO:0005634, GO:0044422
GO:0006888 [BP]ER to Golgi vesicle-mediated transportconfidentGO:0051234, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0009987, GO:0051641, GO:0051179, GO:0044699, GO:0016482
GO:0043547 [BP]positive regulation of GTPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0031323, GO:0043087, GO:0050789, GO:0043085, GO:0031329, GO:0051345, GO:0030811, GO:0065007, GO:0044093, GO:0065009, GO:0033121, GO:0033124, GO:0019219, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0006140
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0030127 [CC]COPII vesicle coatprobableGO:0043227, GO:0043226, GO:0043229, GO:0030117, GO:0030133, GO:0030135, GO:0030134, GO:0005737, GO:0005575, GO:0031982, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0048475, GO:0030658, GO:0030659, GO:0012505, GO:0012506, GO:0012507, GO:0030120, GO:0031090, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0051216 [BP]cartilage developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0009888, GO:0061448, GO:0001501, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0035859 [CC]Seh1-associated complexprobableGO:0043234, GO:0005575, GO:0032991
GO:0019886 [BP]antigen processing and presentation of exogenous peptide antigen via MHC class IIprobableGO:0002504, GO:0019882, GO:0019884, GO:0002478, GO:0002495, GO:0002376, GO:0008150, GO:0048002
GO:0000087 [BP]M phase of mitotic cell cycleprobableGO:0044699, GO:0000279, GO:0000278, GO:0009987, GO:0008150, GO:0044763, GO:0022403, GO:0022402, GO:0007049
GO:0010629 [BP]negative regulation of gene expressionprobableGO:0009892, GO:0019222, GO:0060255, GO:0050789, GO:0008150, GO:0065007, GO:0048519, GO:0010605, GO:0010468
GO:0005789 [CC]endoplasmic reticulum membraneprobableGO:0005737, GO:0005575, GO:0005783, GO:0044432, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0043231, GO:0044446, GO:0042175, GO:0044444, GO:0012505, GO:0044424, GO:0044425, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0007029 [BP]endoplasmic reticulum organizationprobableGO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:0000236 [BP]mitotic prometaphaseprobableGO:0006996, GO:0044699, GO:0000278, GO:0071840, GO:0009987, GO:0000280, GO:0016043, GO:0008150, GO:0022402, GO:0048285, GO:0044763, GO:0007067, GO:0007049, GO:0022403
GO:0031080 [CC]nuclear pore outer ringprobableGO:0016020, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0031224, GO:0044446, GO:0046930, GO:0016021, GO:0005635, GO:0031967, GO:0012505, GO:0043234, GO:0032991, GO:0043231, GO:0005643, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044428, GO:0044424, GO:0044425, GO:0005634, GO:0044422
GO:0043687 [BP]post-translational protein modificationprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0006464, GO:0043170, GO:0071704, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0001889 [BP]liver developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0061008, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0002474 [BP]antigen processing and presentation of peptide antigen via MHC class IprobableGO:0048002, GO:0002376, GO:0019882, GO:0008150
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0018279 [BP]protein N-linked glycosylation via asparagineprobableGO:0044249, GO:0044237, GO:0034645, GO:0009100, GO:0009101, GO:0044267, GO:0044260, GO:0006487, GO:0018196, GO:0018193, GO:0071704, GO:1901576, GO:0009987, GO:0070085, GO:0006464, GO:0043412, GO:0036211, GO:0008150, GO:0008152, GO:0044723, GO:0044238, GO:0005975, GO:0006486, GO:1901137, GO:1901135, GO:0009058, GO:0009059, GO:0043170, GO:0019538, GO:0043413
GO:0048208 [BP]COPII vesicle coatingprobableGO:0022607, GO:0070271, GO:0043933, GO:0006901, GO:0006900, GO:0006903, GO:0048207, GO:0061024, GO:0051656, GO:0051650, GO:0044699, GO:0006888, GO:0071822, GO:0016044, GO:0016043, GO:0065003, GO:0071840, GO:0051641, GO:0006810, GO:0048193, GO:0006461, GO:0048199, GO:0044765, GO:0044763, GO:0051648, GO:0051649, GO:0051234, GO:0051179, GO:0051640, GO:0016482, GO:0006996, GO:0090114, GO:0016192, GO:0046907, GO:0016050, GO:0044085, GO:0008150, GO:0009987
GO:0045893 [BP]positive regulation of transcription, DNA-dependentprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0009891, GO:2000112, GO:0019219, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0010556, GO:0048522
GO:0051028 [BP]mRNA transportprobableGO:0015931, GO:0050658, GO:0051234, GO:0033036, GO:0050657, GO:0071705, GO:0008150, GO:0006810, GO:0071702, GO:0051236, GO:0006403, GO:0051179
GO:0070278 [BP]extracellular matrix constituent secretionprobableGO:0046903, GO:0009987, GO:0051649, GO:0044765, GO:0016043, GO:0032940, GO:0030198, GO:0044763, GO:0071840, GO:0006810, GO:0043062, GO:0008150, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0055123 [BP]digestive system developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0010171 [BP]body morphogenesisprobableGO:0032502, GO:0048856, GO:0044767, GO:0008150, GO:0009653, GO:0044699
GO:0040011 [BP]locomotionprobableGO:0008150
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0007184 [BP]SMAD protein import into nucleusprobableGO:0034504, GO:0051169, GO:0008104, GO:0023052, GO:0007165, GO:0007166, GO:0007167, GO:0050789, GO:0044699, GO:0051716, GO:0051234, GO:0070727, GO:0006886, GO:0051641, GO:0065007, GO:0006810, GO:0071702, GO:0007178, GO:0017038, GO:0034613, GO:0006606, GO:0006913, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0051170, GO:0051649, GO:0044744, GO:0050794, GO:0051179, GO:0016482, GO:0044700, GO:0033036, GO:0046907, GO:0050896, GO:0044763, GO:0007154, GO:0033365, GO:0008150, GO:0009987
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0044351 [BP]macropinocytosisprobableGO:0006897, GO:0016192, GO:0006907, GO:0006810, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0071937 []barrier septum assembly involved in cell cycle cytokinesisprobable
GO:0035293 [BP]chitin-based larval cuticle pattern formationprobableGO:0032502, GO:0042337, GO:0042335, GO:0044707, GO:0007389, GO:0032501, GO:0048856, GO:0007591, GO:0007275, GO:0008363, GO:0002165, GO:0002164, GO:0044767, GO:0003002, GO:0035017, GO:0008150, GO:0009791, GO:0042303, GO:0040003, GO:0044699, GO:0002168
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0000003 [BP]reproductionprobableGO:0008150
GO:0031081 [BP]nuclear pore distributionprobableGO:0006996, GO:0006997, GO:0008104, GO:0070727, GO:0034613, GO:0031503, GO:0016043, GO:0008150, GO:0051664, GO:0071840, GO:0051668, GO:0044763, GO:0009987, GO:0033036, GO:0034629, GO:0051179, GO:0044699, GO:0051641
GO:0006999 [BP]nuclear pore organizationprobableGO:0006996, GO:0006997, GO:0071822, GO:0043933, GO:0009987, GO:0016043, GO:0044763, GO:0071840, GO:0008150, GO:0044699
GO:0000329 [CC]fungal-type vacuole membraneprobableGO:0005737, GO:0005575, GO:0000324, GO:0000323, GO:0000322, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005774, GO:0044446, GO:0044444, GO:0044437, GO:0043231, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0000910 [BP]cytokinesisprobableGO:0009987, GO:0008150, GO:0044763, GO:0007049, GO:0051301, GO:0022402, GO:0044699
GO:0006898 [BP]receptor-mediated endocytosisprobableGO:0006897, GO:0016192, GO:0006810, GO:0008150, GO:0051234, GO:0051179
GO:0030433 [BP]ER-associated protein catabolic processprobableGO:0044248, GO:0043632, GO:0044267, GO:1901575, GO:0044265, GO:0044260, GO:0043161, GO:0071704, GO:0006508, GO:0044238, GO:0009987, GO:0019941, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0009056, GO:0009057, GO:0051603, GO:0019538, GO:0010498, GO:0044237, GO:0043170, GO:0006511
GO:0006607 [BP]NLS-bearing substrate import into nucleusprobableGO:0034504, GO:0051169, GO:0008104, GO:0044699, GO:0070727, GO:0006886, GO:0006810, GO:0071702, GO:0051641, GO:0017038, GO:0034613, GO:0006606, GO:0006913, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0051170, GO:0051649, GO:0044744, GO:0051234, GO:0051179, GO:0016482, GO:0033036, GO:0046907, GO:0044763, GO:0033365, GO:0008150, GO:0009987
GO:0040007 [BP]growthprobableGO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BG1, chain A
Confidence level:very confident
Coverage over the Query: 14-310
View the alignment between query and template
View the model in PyMOL