Psyllid ID: psy2762

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRAM
Secondary Structure (PSIPRED)
cccccccHHccccccEEEEEEcccccEEEEccccccEEEEEcccccccccccccccEEEEEEEcccccEEEEEEEccccccEEEEEEccccEEEEEccccEEEEEEEEEcccccEEEEEEcccccccEEEEEEccccEEEEEEEcccccEEEEEEccccccEEEEEEccccccccccccccccccccccEEEEEcccccEEEEEcccccEEEEEccccccccEEEEEEcccccccccEEEEEEccccEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEEccccccEEEc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccccEEEEEEcccccEEEEcccccEEEEEEcccccEEEccccccccEEEEEEcccccEEEEEEcccccccEEEEEccccEEEEEEcccccEEEEEEEccccccEEEEEEcccccccEEEEcccccEEEEEEccccccccEEEEEccccccEEEEEEcccccEEEEccccEEEEcccccEEEEEccccEEEEEEcccccEEEEEEEccccccEEEEEEcccccccccEEEEcccccEEEEEEcccccEEEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccccEEcc
Coil and Loop (DISEMBL)
mvsqlnlvdtghedmihDAEMDYLGLYLATcssdhtvkvfnldrnlkkddshsqkGTLIAELkghsgpvwqvawahpqfgtllascsydRKVIIWrgdngnwfkyyeynnhdssvnsiawapKEFGLILacgssdgtiSFLTYMSDTNSWESRKIAAHTIGcnavswgpgigslseldlkgsklgGVAKRLVSGGCDNLIKIWKQEGDKWIEETklenhsdwvrdvawapswglskcmiascsqDRKVIIWTSndyvtwtpfimntFDDVVWNVSWSltgdiltvscgdnsvslwKENTDGAWQCITEMGktseqram
Flexible Loop (DISEMBL)
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDrnlkkddshsQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETklenhsdwvRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEmgktseqram
Low Complexity Region (SEG)
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRAM
Disordered region (IsUnstruct)
***********HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRN***********TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT***********
Disordered Region (DISOPRED)
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE*DL****LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT**G*******M
Disordered Region (DISEMBL)
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG********
Disordered Region (DISPRO)
*VSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQR**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRAM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	318	2.2.26 [Sep-21-2011]
P55735	322	Protein SEC13 homolog OS=	yes	N/A	0.946	0.934	0.606	1e-103
Q3ZCC9	322	Protein SEC13 homolog OS=	yes	N/A	0.946	0.934	0.593	1e-101
Q9D1M0	322	Protein SEC13 homolog OS=	yes	N/A	0.946	0.934	0.593	1e-101
Q5XFW8	322	Protein SEC13 homolog OS=	yes	N/A	0.946	0.934	0.593	1e-101
Q54DS8	301	Protein transport protein	yes	N/A	0.915	0.966	0.516	9e-86
Q4PCB8	364	Protein transport protein	N/A	N/A	0.921	0.804	0.450	2e-80
O94319	297	Protein transport protein	yes	N/A	0.915	0.979	0.498	4e-78
P53024	289	Protein transport protein	yes	N/A	0.874	0.961	0.487	1e-75
Q6CSZ5	302	Protein transport protein	yes	N/A	0.899	0.947	0.471	2e-72
Q6BZX5	298	Protein transport protein	yes	N/A	0.880	0.939	0.484	6e-72

>sp|P55735|SEC13_HUMAN Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3

 Score =  374 bits (959), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/315 (60%), Positives = 231/315 (73%), Gaps = 14/315 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN  +         LIA
Sbjct: 1   MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQ--------ILIA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIWR +NG W K +E+  HDSSVNS+ W
Sbjct: 52  DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +     KR  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct: 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           IASCSQD +V IWT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query: 297 ENTDGAWQCITEMGK 311
           E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305

Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.
Homo sapiens (taxid: 9606)

>sp|Q3ZCC9|SEC13_BOVIN Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/315 (59%), Positives = 231/315 (73%), Gaps = 14/315 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN  +         L+A
Sbjct: 1   MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQ--------ILVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+  HDSSVNS+ W
Sbjct: 52  DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP ++GLILACGSSDG IS LTY +    WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct: 112 APHDYGLILACGSSDGAISLLTY-TGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +     K+  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           IASCSQD +V +WT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query: 297 ENTDGAWQCITEMGK 311
           E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305

Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.

Bos taurus (taxid: 9913)

>sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/315 (59%), Positives = 231/315 (73%), Gaps = 14/315 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN  +         LIA
Sbjct: 1   MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQ--------ILIA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct: 52  DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +     K+  SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           IASCSQD +V IWT +D     W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query: 297 ENTDGAWQCITEMGK 311
           E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305

Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.

Mus musculus (taxid: 10090)

>sp|Q5XFW8|SEC13_RAT Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/315 (59%), Positives = 231/315 (73%), Gaps = 14/315 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN  +         LIA
Sbjct: 1   MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQ--------ILIA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct: 52  DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +     K+  SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct: 171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           IASCSQD +V IWT +D     W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query: 297 ENTDGAWQCITEMGK 311
           E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305

Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.

Rattus norvegicus (taxid: 10116)

>sp|Q54DS8|SEC13_DICDI Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1

 Score =  317 bits (811), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 157/304 (51%), Positives = 206/304 (67%), Gaps = 13/304 (4%)

Query: 8   VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
           VD+GHEDM+HDA+ DY G +LATCSSD  +K+F         D   +    + +L+GH G
Sbjct: 6   VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIF---------DVGGENPQHLVDLRGHEG 56

Query: 68  PVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           PVWQVAWAHP+FG +LAS SYDRKVI+W+   N +W   ++Y  H+ SVNSI+WAP EFG
Sbjct: 57  PVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFG 116

Query: 127 LILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
           L LAC SSDG+++   Y  + N WE+ +KI    IG N+VSW P     S ++   + + 
Sbjct: 117 LSLACASSDGSVTIHNY--NNNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIP 174

Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
              KR+V+G CDNLIKI+K   DKWI + +LE+H DWVRDVAWAP+ GL    IASCSQD
Sbjct: 175 APIKRIVTGSCDNLIKIFKNVEDKWILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQD 234

Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
           R VI+WT ++   W+   +  FDD+VW VSWS+ G+IL VSCGDN V+LWKE  D  W+ 
Sbjct: 235 RSVIVWTQDENGVWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKL 294

Query: 306 ITEM 309
           I+ +
Sbjct: 295 ISHV 298

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.

Dictyostelium discoideum (taxid: 44689)

>sp|Q4PCB8|SEC13_USTMA Protein transport protein SEC13 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SEC13 PE=3 SV=1

 Score =  299 bits (765), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 208/351 (59%), Gaps = 58/351 (16%)

Query: 8   VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
           ++T HEDM+HDA++D+ G  LATCSSD TVKVF++         +    T    L GH G
Sbjct: 21  IETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDI--------VNGTPSTTAETLHGHQG 72

Query: 68  PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN------------------------GNWF 103
           PVWQVAWAHP FG +LASCSYD KV+IW+ +                         G W 
Sbjct: 73  PVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWT 132

Query: 104 KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163
           K  E+  H +SVNSI+WAP E G ILAC SSDG +S LT+ +D  +W    +AAH +GCN
Sbjct: 133 KIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLTFNND-GTWAVDLVAAHPVGCN 191

Query: 164 AVSWGPGI--GSLSELDLKGSKLGGVA-------KRLVSGGCDNLIKIWK--QEGDKWIE 212
           AVSW P +  GSL      G+  G  +       KR  S GCDN +KIW+  QE ++++E
Sbjct: 192 AVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVE 251

Query: 213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMNT----- 266
              L+ HSDWVRDVA+AP+ GL +  +A+ SQDR V+IWT +     W+   +N      
Sbjct: 252 VEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASA 311

Query: 267 --------FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
                   F D VW VSWS++G++L VSCGD  ++LWKEN  GAW+C++EM
Sbjct: 312 AAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVSEM 362

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|O94319|SEC13_SCHPO Protein transport protein sec13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec13 PE=1 SV=1

 Score =  291 bits (745), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 198/309 (64%), Gaps = 18/309 (5%)

Query: 5   LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
           +  VDT H+DMIHDA +DY G  LATCSSD T+KVF+++ N         + TL+  L+G
Sbjct: 1   MTTVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENN---------QQTLLETLRG 51

Query: 65  HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
           HSGPVWQ+ WAHP+FGT+LAS SYD  VI+WR   G W +  ++  H +SVN+++WAP E
Sbjct: 52  HSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHE 111

Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
           +G +LAC SSDG +S L +  D  S ++R   AH  GCNAV W P   SLS   +  S  
Sbjct: 112 YGALLACASSDGKVSVLEFKDD-GSCDTRIFTAHEPGCNAVCWSP--PSLSGSVVGQSPA 168

Query: 185 GGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
            G  K+L + GCDNL+KIW  +   + WI E  L  H DW RDVAWAPS GL+K  +AS 
Sbjct: 169 AG-PKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASA 227

Query: 243 SQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           SQD+ V IWT      W  TP     F D+ W VSWSL+G+IL VSCGDN V L+KE+ +
Sbjct: 228 SQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKESQN 287

Query: 301 GAWQCITEM 309
             WQ + E+
Sbjct: 288 -KWQLLNEL 295

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution (By similarity). Involved in septum formation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53024|SEC13_PICPG Protein transport protein SEC13 OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=SEC13 PE=3 SV=3

 Score =  283 bits (724), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/308 (48%), Positives = 190/308 (61%), Gaps = 30/308 (9%)

Query: 8   VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
           +   H+D+IHDA +DY G  LATCSSD T+K+F +D          +   L+  L GH G
Sbjct: 4   IGNAHDDLIHDAVLDYYGRRLATCSSDKTIKIFEID---------GENQRLVETLIGHEG 54

Query: 68  PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
           PVWQVAWAHP+FG +LASCSYD KV+IW+ DNG W K  E++ H +SVNS++WAP E+G 
Sbjct: 55  PVWQVAWAHPKFGVILASCSYDGKVLIWKEDNGVWNKVAEHSVHQASVNSVSWAPHEYGP 114

Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV 187
           +L C SSDG IS + +  D  + E   I  H IG NA SW P              L   
Sbjct: 115 VLLCASSDGKISIVEF-KDGGALEPIVIQGHAIGVNAASWAP------------ISLPDN 161

Query: 188 AKRLVSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
            +R VSGGCDNL+KIW+ +     +IEE   + HSDWVRDVAW+PS  LSK  IA+ SQD
Sbjct: 162 TRRFVSGGCDNLVKIWRYDDAAKTFIEEEAFQGHSDWVRDVAWSPS-RLSKSYIATASQD 220

Query: 246 RKVIIWT----SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
           R V+IWT    SN +    P     F DV W  SWSL+G++L +S GDN V+LWKEN  G
Sbjct: 221 RTVLIWTKDGKSNKWEK-QPLTKEKFPDVCWRASWSLSGNVLAISGGDNKVTLWKENIQG 279

Query: 302 AWQCITEM 309
            W+   E+
Sbjct: 280 KWESAGEV 287

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.

Pichia pastoris (strain GS115 / ATCC 20864) (taxid: 644223)

>sp|Q6CSZ5|SEC13_KLULA Protein transport protein SEC13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC13 PE=3 SV=1

 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 143/303 (47%), Positives = 190/303 (62%), Gaps = 17/303 (5%)

Query: 8   VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
           ++  H ++IHDA +DY G  LATCSSDHTVK+F ++    K         L+  L+GH G
Sbjct: 4   INNAHSELIHDAVLDYYGKRLATCSSDHTVKIFEVEGETHK---------LVDTLQGHEG 54

Query: 68  PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL 127
           PVWQV WAHP+FG +LASCSYD KV+IW+  NG W +   +  H +SVNSI WAP E+G 
Sbjct: 55  PVWQVDWAHPKFGVILASCSYDGKVLIWKEVNGRWSQIAAHEVHSASVNSIQWAPHEYGP 114

Query: 128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG-IGSLSELDLKGSKLGG 186
           +L   SSDG +S + +  +  +     I AH+IG N   W P  +   S     GS    
Sbjct: 115 LLLAASSDGKVSVVEFKENGTT-SPIIIDAHSIGANTACWAPATLQQQSNQGTSGSASPQ 173

Query: 187 VAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
             +R V+GG DNL+KIWK   D   ++ E  LE HSDWVRDVAW+P+  LS+  +AS SQ
Sbjct: 174 QVRRFVTGGADNLVKIWKYNSDAATYLLEHTLEGHSDWVRDVAWSPT-VLSRSYLASVSQ 232

Query: 245 DRKVIIWTSNDYV-TWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
           DR  IIWT +    TW   ++  + F DV+W  SWSL+G+IL +SCGDN+V+LWKEN +G
Sbjct: 233 DRTCIIWTQDSKEDTWKKTLLKEDKFPDVLWRASWSLSGNILALSCGDNTVTLWKENLEG 292

Query: 302 AWQ 304
            W+
Sbjct: 293 KWE 295

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q6BZX5|SEC13_YARLI Protein transport protein SEC13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC13 PE=3 SV=1

 Score =  271 bits (692), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 144/297 (48%), Positives = 190/297 (63%), Gaps = 17/297 (5%)

Query: 12  HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
           H+D+IHDA +DY G  LATCSSD T+K+F +D      D+H     L+  L+GH GPVWQ
Sbjct: 8   HDDLIHDAVLDYYGKRLATCSSDKTIKIFEID-----GDNHK----LVETLRGHEGPVWQ 58

Query: 72  VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
           V+WAHP+FG+++AS SYD KV IWR +NG W    ++  H++SVNS+ WAP+E+G +L C
Sbjct: 59  VSWAHPKFGSIIASASYDGKVFIWREENGRWTNIAQH-QHNASVNSVVWAPQEYGPLLLC 117

Query: 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL 191
            SSDG +S + +    N  E+   AAH +G N+ SW P   S S +     K      R+
Sbjct: 118 ASSDGNVSVVEFKEGGNC-EATTFAAHDVGANSASWAPPAVSGSLIQPINGKASN-NIRI 175

Query: 192 VSGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
           V+GGCDNL+KIWK +     ++ E  L  H DWVRDVAW+ S  LSK  IAS SQD+ VI
Sbjct: 176 VTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSS-VLSKSYIASASQDKTVI 234

Query: 250 IWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
           +WT      W   ++    F DVVW VSWSL+G++L VS GDN V+LWKEN  G W+
Sbjct: 235 VWTQEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWE 291

Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
340713861	311	PREDICTED: protein SEC13 homolog [Bombus	0.955	0.977	0.664	1e-116
383859895	311	PREDICTED: protein SEC13 homolog [Megach	0.955	0.977	0.661	1e-116
307177449	313	Protein SEC13-like protein [Camponotus f	0.962	0.977	0.646	1e-115
110756630	311	PREDICTED: protein SEC13 homolog [Apis m	0.955	0.977	0.649	1e-115
307201502	313	Protein SEC13-like protein [Harpegnathos	0.959	0.974	0.647	1e-115
242017223	361	protein transport protein sec13, putativ	0.965	0.850	0.636	1e-115
156540469	311	PREDICTED: protein SEC13 homolog [Nasoni	0.955	0.977	0.655	1e-113
357630898	313	putative protein transport protein sec13	0.940	0.955	0.637	1e-110
332025688	310	Protein SEC13-like protein [Acromyrmex e	0.933	0.958	0.647	1e-110
91086141	308	PREDICTED: similar to protein transport	0.949	0.980	0.624	1e-110

>gi|340713861|ref|XP_003395453.1| PREDICTED: protein SEC13 homolog [Bombus terrestris] gi|350409642|ref|XP_003488802.1| PREDICTED: protein SEC13 homolog [Bombus impatiens]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/325 (66%), Positives = 252/325 (77%), Gaps = 21/325 (6%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD++VK+F+L     K+ S S    L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNSVKIFDL-----KNGSQS----LVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +LKGH GPVWQV WAHP+FG LLASCSYDRKVIIW+ + G W K YE+N HDSSVNS+AW
Sbjct: 52  DLKGHVGPVWQVTWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKIYEHNGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG++S L    DT  W+++KI  AHTIGCNAVSW P I      D 
Sbjct: 111 APHEFGLILACGSSDGSVSILINNGDT--WDTQKITNAHTIGCNAVSWCPAIEP--SFDA 166

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
            G++  G  KRL +GGCDNL+KIWK+EGD+WIEE KLE HSDW+RDVAWAP+ G SK  +
Sbjct: 167 SGTQKNGPIKRLATGGCDNLVKIWKEEGDRWIEEDKLEAHSDWIRDVAWAPAVGPSKAAL 226

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+VI+WTSNDY +WTP I+N FDDV+WNVSWSLTG IL VS GDN VSLW+ENT
Sbjct: 227 ASCSQDRRVIVWTSNDYTSWTPTILNVFDDVIWNVSWSLTGGILAVSGGDNKVSLWRENT 286

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E  K       +EQRA+
Sbjct: 287 EGQWTCISETNKGQGNLNNTEQRAL 311

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859895|ref|XP_003705427.1| PREDICTED: protein SEC13 homolog [Megachile rotundata]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/325 (66%), Positives = 249/325 (76%), Gaps = 21/325 (6%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD++VK+F+L    +         TL+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNSVKIFDLKNGSQ---------TLVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
            LK H GPVWQVAWAHP+FG LLASCSYDRKVIIW+ + G W K YE+  HDSSVNS+AW
Sbjct: 52  NLKEHVGPVWQVAWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKIYEHTGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG++S LT   DT  WE++KI  AHTIGCNAVSW P I      D 
Sbjct: 111 APHEFGLILACGSSDGSVSILTNNGDT--WETQKITNAHTIGCNAVSWCPAIEP--SFDA 166

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
            G++  G  KRL +GGCDNL+KIWK+EGD+WIEE KLE HSDWVRDVAWAP+ G SK  +
Sbjct: 167 SGTQRNGPVKRLATGGCDNLVKIWKEEGDRWIEEDKLEAHSDWVRDVAWAPAVGPSKAAL 226

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+VI+WTSNDY +WTP I+N FDDV+WNVSWSLTG IL VS GDN VSLW+ENT
Sbjct: 227 ASCSQDRRVIVWTSNDYTSWTPTILNVFDDVIWNVSWSLTGGILAVSGGDNKVSLWRENT 286

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E  K       ++QRA+
Sbjct: 287 EGQWICISETNKGQGNLNNTDQRAL 311

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307177449|gb|EFN66576.1| Protein SEC13-like protein [Camponotus floridanus]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/325 (64%), Positives = 249/325 (76%), Gaps = 19/325 (5%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD++VK+F+L    +         +L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNSVKIFDLKNGTQ---------SLVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
            LKGH GPVWQVAWAHP+FG LLASCSYDRKVIIW+ + G W K YE+  HDSSVNS+AW
Sbjct: 52  VLKGHIGPVWQVAWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKIYEHTGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG+IS LT   DT  W+++KI  AHTIGCNAVSW P I S  +   
Sbjct: 111 APHEFGLILACGSSDGSISILTNTGDT--WQTQKITNAHTIGCNAVSWCPAIDSAVDSAN 168

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
              +  G  KRL +GGCDNL+KIWK+EGD+WIEE KLE HSDWVRDVAWAP+ G S+  +
Sbjct: 169 TTQQRSGPVKRLATGGCDNLVKIWKEEGDRWIEENKLEAHSDWVRDVAWAPAVGPSRAAL 228

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+V++WTSNDY +WTP ++N FDDV+WNVSWSLTG IL VS GDN VSLW+EN+
Sbjct: 229 ASCSQDRRVVVWTSNDYTSWTPNVLNVFDDVIWNVSWSLTGGILAVSGGDNKVSLWRENS 288

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E+ K        +QRA+
Sbjct: 289 EGQWACISELNKDQGNPNNPDQRAL 313

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110756630|ref|XP_393516.3| PREDICTED: protein SEC13 homolog [Apis mellifera] gi|380024897|ref|XP_003696225.1| PREDICTED: protein SEC13 homolog [Apis florea]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/325 (64%), Positives = 250/325 (76%), Gaps = 21/325 (6%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD+++K+F+L    +         +L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNSIKIFDLKNGTQ---------SLVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +LKGH GPVWQV WAHP+FG LLASCSYDRKVIIW+ + G W K YE+N HDSSVNS+AW
Sbjct: 52  DLKGHVGPVWQVTWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKIYEHNGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG++S L    DT  W+++KI  AH+IGCNAVSW P I      D 
Sbjct: 111 APHEFGLILACGSSDGSVSILINNGDT--WDTQKITNAHSIGCNAVSWCPAIEP--SFDA 166

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
            G++  G  KRL +GGCDNL+KIWK+EGD+WIEE KLE HSDWVRDVAWAP+ G SK  +
Sbjct: 167 SGTQRNGPIKRLATGGCDNLVKIWKEEGDRWIEEDKLEAHSDWVRDVAWAPAVGPSKAAL 226

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+VI+WTSNDY +WTP I+N FDDV+WNVSWSLTG IL VS GDN VSLW+ENT
Sbjct: 227 ASCSQDRRVIVWTSNDYTSWTPTILNVFDDVIWNVSWSLTGGILAVSGGDNKVSLWRENT 286

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E  K       ++QRA+
Sbjct: 287 EGQWICISETNKGQGNLNNTDQRAL 311

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201502|gb|EFN81265.1| Protein SEC13-like protein [Harpegnathos saltator]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/326 (64%), Positives = 252/326 (77%), Gaps = 21/326 (6%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD++VK+F+L    +         +L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNSVKIFDLKNGNQ---------SLVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           ELKGH GPVWQVAWAHP+FG LLASCSYDRKVIIW+ + G W K YE+  HDSSVNS+AW
Sbjct: 52  ELKGHIGPVWQVAWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKVYEHTGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG+IS LT   D  +W ++KI  AHTIGCNAVSW P I S  + + 
Sbjct: 111 APHEFGLILACGSSDGSISILTNTGD--AWHTQKIPNAHTIGCNAVSWCPAIDSGFDANA 168

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
              + G V KRL +GGCDNL+KIWK+EGD+W+EE KLE HSDWVRDVAWAP+ G S+  +
Sbjct: 169 TQQRSGPV-KRLATGGCDNLVKIWKEEGDRWVEENKLEAHSDWVRDVAWAPAVGPSRAAL 227

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+V++WTSNDY +W P I+N FDDV+WNVSWSLTG IL VS GDN VSLW+EN+
Sbjct: 228 ASCSQDRRVVVWTSNDYASWIPNILNVFDDVIWNVSWSLTGGILAVSGGDNKVSLWRENS 287

Query: 300 DGAWQCITEMGK-------TSEQRAM 318
           +G W CI+E+ K       T++QRA+
Sbjct: 288 EGQWACISELNKGQGNLNSTADQRAL 313

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017223|ref|XP_002429091.1| protein transport protein sec13, putative [Pediculus humanus corporis] gi|212513955|gb|EEB16353.1| protein transport protein sec13, putative [Pediculus humanus corporis]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 207/325 (63%), Positives = 253/325 (77%), Gaps = 18/325 (5%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MV+ +N  DTGHEDMIHDAE+DY GL LATCSSDH+VK++++    +         TL+A
Sbjct: 48  MVTAINTFDTGHEDMIHDAELDYYGLRLATCSSDHSVKIYDVKNGAQ---------TLLA 98

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +LKGH GPVWQ++WAHP+FG LLASCSYDRKVIIW+ D G W K YEY  HDSSVNS+ W
Sbjct: 99  DLKGHYGPVWQISWAHPKFGNLLASCSYDRKVIIWK-DMGEWKKLYEYPGHDSSVNSVQW 157

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG+IS LT   D ++W+++KI  AHTIGCNAVSW P        D+
Sbjct: 158 APYEFGLILACGSSDGSISILTGSGDGSTWDAKKITNAHTIGCNAVSWCPATVVNPVFDV 217

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
             ++ G   KRLVSGGCDN +KIWK++GD+WIEE KLE HSDWVRDVAWAPS GL K +I
Sbjct: 218 N-ARAGPPVKRLVSGGCDNAVKIWKEDGDRWIEEAKLEVHSDWVRDVAWAPSLGLPKSLI 276

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+VIIW+S+D + WTP ++NTFDDVVWNVSWSLTG+IL+VS GDN VSLW+EN 
Sbjct: 277 ASCSQDRRVIIWSSDDNINWTPTVLNTFDDVVWNVSWSLTGNILSVSGGDNKVSLWRENN 336

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E+ K      +++QRA+
Sbjct: 337 EGQWMCISEVNKGQGTVSSNDQRAV 361

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156540469|ref|XP_001599879.1| PREDICTED: protein SEC13 homolog [Nasonia vitripennis]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 213/325 (65%), Positives = 251/325 (77%), Gaps = 21/325 (6%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSDH+VK+F+L     K+ S S    L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDHSVKIFDL-----KNGSPS----LVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           ELKGH GPVWQ+AWAHP++G LLASCSYDRKVIIW+ +   W K YE+  HDSSVNSIAW
Sbjct: 52  ELKGHQGPVWQIAWAHPKYGNLLASCSYDRKVIIWK-ELSEWTKIYEHTVHDSSVNSIAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP E GLILACGSSDG+IS L  +++ ++WE++KI  AHTIGCNAVSW P I  +  LD 
Sbjct: 111 APHEIGLILACGSSDGSISIL--INNGDNWETQKIPNAHTIGCNAVSWCPVIEPI--LDN 166

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
              +     KRL S GCDN++KIWK+EGDKWIEETKLE HSDWVRDVAWAP+ G  +  +
Sbjct: 167 ASQQQKAPVKRLASAGCDNIVKIWKEEGDKWIEETKLEAHSDWVRDVAWAPAVGPPRAAL 226

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+VI+WTS DY +WTP I+N FDDVVWNVSWSLTG IL VS GDN VSLW+ENT
Sbjct: 227 ASCSQDRRVIVWTSTDYASWTPNILNVFDDVVWNVSWSLTGGILAVSGGDNQVSLWRENT 286

Query: 300 DGAWQCITEMGK------TSEQRAM 318
           +G W CI+E+ K       ++QRA+
Sbjct: 287 EGQWICISELNKGQGNINNTDQRAL 311

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357630898|gb|EHJ78717.1| putative protein transport protein sec13 [Danaus plexippus]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/312 (63%), Positives = 247/312 (79%), Gaps = 13/312 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           M+S LN +DTGHEDMIHDAE+DY GL LATCSSD++VK++++          S   TL A
Sbjct: 1   MISVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDI---------KSGTQTLAA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +LKGH GPVWQVAWAHP+FG LLASCSYDRKVIIW+ ++G W K YEY+ H+SSVNS+AW
Sbjct: 52  DLKGHFGPVWQVAWAHPKFGNLLASCSYDRKVIIWK-ESGEWTKLYEYSGHESSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP+E+GLILAC SSDG+IS +TY  D  +W+ +KI  AH IG N++SW P I +   LD 
Sbjct: 111 APEEYGLILACCSSDGSISTITYNQDGGNWDVKKIPGAHAIGVNSISWCPAISADLHLDP 170

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
             +K     KR+VSGGCDNLIKIWK++GD+WIEE +LE H DWVRDVAWAPS GL + MI
Sbjct: 171 LTNK--DAPKRIVSGGCDNLIKIWKEQGDQWIEENRLEMHMDWVRDVAWAPSLGLQRSMI 228

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQD++V+IW+S+D V+W+P I+NTFDDV+W+VSWSLTG+IL VS GDN VSLW+EN 
Sbjct: 229 ASCSQDKRVVIWSSDDNVSWSPTILNTFDDVIWSVSWSLTGNILAVSGGDNKVSLWRENA 288

Query: 300 DGAWQCITEMGK 311
           DG W CI+E+ K
Sbjct: 289 DGQWLCISEVAK 300

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025688|gb|EGI65847.1| Protein SEC13-like protein [Acromyrmex echinatior]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 202/312 (64%), Positives = 241/312 (77%), Gaps = 15/312 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS LN VDTGHEDMIHDAEMDY GL LATCSSD+TVK+F+L     K+ S S    L+A
Sbjct: 1   MVSVLNTVDTGHEDMIHDAEMDYYGLRLATCSSDNTVKIFDL-----KNGSQS----LVA 51

Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
            LKGH GPVWQVAWAHP+FG LLASCSYDRKVIIW+ + G W K YE+  HDSSVNS+AW
Sbjct: 52  VLKGHIGPVWQVAWAHPKFGNLLASCSYDRKVIIWK-ELGEWTKIYEHTGHDSSVNSVAW 110

Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
           AP EFGLILACGSSDG++S L    DT  W+ +KI  AHTIGCNAV W P + S +  D 
Sbjct: 111 APHEFGLILACGSSDGSVSILANTGDT--WQMQKITNAHTIGCNAVCWSPAVDSGT--DS 166

Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI 239
              +     KRL +GGCDNL+KIWK++GD+WIEE KLE HSDWVRDVAWAP+ G S+  +
Sbjct: 167 NTQQRNDPVKRLATGGCDNLVKIWKEDGDRWIEENKLEAHSDWVRDVAWAPAVGPSRATL 226

Query: 240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
           ASCSQDR+++IWTSNDY +WTP ++N FDDV+WN+ WSLTG IL V  GDN VSLW+EN+
Sbjct: 227 ASCSQDRRIVIWTSNDYTSWTPKVLNVFDDVIWNIGWSLTGGILAVCGGDNKVSLWRENS 286

Query: 300 DGAWQCITEMGK 311
           +G W CI+E+ +
Sbjct: 287 EGQWACISELNQ 298

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086141|ref|XP_969127.1| PREDICTED: similar to protein transport protein sec13 [Tribolium castaneum] gi|270009887|gb|EFA06335.1| hypothetical protein TcasGA2_TC009207 [Tribolium castaneum]

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/317 (62%), Positives = 245/317 (77%), Gaps = 15/317 (4%)

Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGT-LI 59
           MVS LN +DTGHEDM+HDAE+DY GL LATCSSD++VKV+++             GT LI
Sbjct: 1   MVSILNSIDTGHEDMVHDAEVDYYGLRLATCSSDNSVKVYDI----------KNGGTALI 50

Query: 60  AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA 119
            +LKGH GPVWQ+AW+HP+FG LLASCSYDRKVIIW+  NG + KYYEY NHDSSVNS+ 
Sbjct: 51  DDLKGHFGPVWQIAWSHPKFGNLLASCSYDRKVIIWKEQNGKFTKYYEYANHDSSVNSVQ 110

Query: 120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELD 178
           +AP E+GL+LACGSSDG+IS L+Y+S+T++W+++KI  AH IGCNAVSW P I   S   
Sbjct: 111 FAPPEYGLVLACGSSDGSISILSYISETHNWDAKKIQNAHAIGCNAVSWAPAITPTSGEF 170

Query: 179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +KL    KRLVSGGCDNL+K+W++E D+W+EE KLE HSDWVRDVAWAPS GL +  
Sbjct: 171 RDAAKL---VKRLVSGGCDNLVKVWREEEDRWVEENKLEVHSDWVRDVAWAPSVGLHQHT 227

Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
           IASCSQDR+VIIWTS+D   W   ++ TFDDVVWNVSWSL G+IL VS GDN ++LWK+N
Sbjct: 228 IASCSQDRRVIIWTSDDGNNWNSTVLQTFDDVVWNVSWSLNGNILAVSGGDNKITLWKQN 287

Query: 299 TDGAWQCITEMGKTSEQ 315
             G WQC++++ K   Q
Sbjct: 288 LQGNWQCVSDVVKGQGQ 304

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
UNIPROTKB|E1BVC4	320	SEC13 "Uncharacterized protein	0.940	0.934	0.617	3.7e-103
UNIPROTKB|P55735	322	SEC13 "Protein SEC13 homolog"	0.946	0.934	0.609	1.1e-101
UNIPROTKB|F1PDM3	322	SEC13 "Uncharacterized protein	0.946	0.934	0.603	2.3e-101
UNIPROTKB|Q3ZCC9	322	SEC13 "Protein SEC13 homolog"	0.946	0.934	0.596	6.2e-101
ZFIN|ZDB-GENE-040426-2649	320	sec13 "SEC13 homolog (S. cerev	0.940	0.934	0.601	7.9e-101
MGI|MGI:99832	322	Sec13 "SEC13 homolog (S. cerev	0.946	0.934	0.596	1.7e-100
RGD|1359555	322	Sec13 "SEC13 homolog (S. cerev	0.946	0.934	0.596	1.7e-100
FB|FBgn0024509	386	Sec13 "Sec13 ortholog (S. cere	0.921	0.759	0.568	2.9e-96
DICTYBASE|DDB_G0292052	301	sec13 "putative transport prot	0.915	0.966	0.516	1e-84
POMBASE|SPBC215.15	297	sec13 "COPII-coated vesicle co	0.915	0.979	0.498	3e-78

UNIPROTKB|E1BVC4 SEC13 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
 Identities = 195/316 (61%), Positives = 234/316 (74%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   LIA
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K YEY  HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI--GSLSEL 177
             AP ++GLILACGSSDG IS L+Y  D   WE +KI+ AHTIGCNAVSW P +  GSL E 
Sbjct:   112 APHDYGLILACGSSDGAISLLSYTGD-GQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQ 170

Query:   178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
                G K   + KR  SGGCDNL+KIWK+E  +W EE KLE HSDWVRDVAWAPS GL   
Sbjct:   171 P-SGQKPNYI-KRFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 228

Query:   238 MIASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
              IASCSQD +V IWT +D    +W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LW
Sbjct:   229 TIASCSQDGRVFIWTCDDASGSSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 288

Query:   296 KENTDGAWQCITEMGK 311
             KE+ DG W CI+++ K
Sbjct:   289 KESVDGLWACISDVNK 304

GO:0000776 "kinetochore" evidence=IEA

GO:0005635 "nuclear envelope" evidence=IEA

UNIPROTKB|P55735 SEC13 "Protein SEC13 homolog" [Homo sapiens (taxid:9606)]

 Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
 Identities = 192/315 (60%), Positives = 231/315 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   LIA
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIWR +NG W K +E+  HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
             AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct:   112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170

Query:   180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
                +     KR  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct:   171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query:   239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             IASCSQD +V IWT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct:   231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query:   297 ENTDGAWQCITEMGK 311
             E+ DG W CI+++ K
Sbjct:   291 ESVDGQWVCISDVNK 305

GO:0051028 "mRNA transport" evidence=IEA

GO:0031080 "nuclear pore outer ring" evidence=NAS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005635 "nuclear envelope" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=NAS

GO:0000776 "kinetochore" evidence=IDA

GO:0000087 "M phase of mitotic cell cycle" evidence=TAS

GO:0000236 "mitotic prometaphase" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0002474 "antigen processing and presentation of peptide antigen via MHC class I" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=TAS

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0019886 "antigen processing and presentation of exogenous peptide antigen via MHC class II" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0048208 "COPII vesicle coating" evidence=TAS

UNIPROTKB|F1PDM3 SEC13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
 Identities = 190/315 (60%), Positives = 231/315 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   LIA
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+  HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
             AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct:   112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query:   180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
                +     K+  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct:   171 PSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query:   239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             IASCSQD +V IWT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct:   231 IASCSQDGRVFIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query:   297 ENTDGAWQCITEMGK 311
             E+ DG W CI+++ K
Sbjct:   291 ESVDGQWVCISDVNK 305

GO:0005635 "nuclear envelope" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

UNIPROTKB|Q3ZCC9 SEC13 "Protein SEC13 homolog" [Bos taurus (taxid:9913)]

 Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
 Identities = 188/315 (59%), Positives = 231/315 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   L+A
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILVA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E+  HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
             AP ++GLILACGSSDG IS LTY +    WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct:   112 APHDYGLILACGSSDGAISLLTY-TGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query:   180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
                +     K+  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct:   171 PSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query:   239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             IASCSQD +V +WT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct:   231 IASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query:   297 ENTDGAWQCITEMGK 311
             E+ DG W CI+++ K
Sbjct:   291 ESVDGQWVCISDVNK 305

GO:0031080 "nuclear pore outer ring" evidence=ISS

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

GO:0051028 "mRNA transport" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

ZFIN|ZDB-GENE-040426-2649 sec13 "SEC13 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 190/316 (60%), Positives = 230/316 (72%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++     K+        L+A
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-----KNGGQ----ILVA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +N  W K YEY  HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI--GSLSEL 177
              P +FGLILACGSSDG IS LT   D + W+ +KI  AHTIGCNAVSW P +  GSL E 
Sbjct:   112 GPYDFGLILACGSSDGAISVLTCSGDGH-WDIKKINNAHTIGCNAVSWAPAVVPGSLIEQ 170

Query:   178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
                G K   + KR VSGGCDNL+K+WK+E  +W E+ KLE HSDWVRDV WAPS GL   
Sbjct:   171 PT-GQKPNYI-KRFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTS 228

Query:   238 MIASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
              IASCSQD +V IWT +D    TWT  +++ F+DVVW+VSWS+TG+IL VS GDN V+LW
Sbjct:   229 TIASCSQDGRVFIWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLW 288

Query:   296 KENTDGAWQCITEMGK 311
             KE+ DG W CI+++ K
Sbjct:   289 KESVDGQWACISDVNK 304

GO:0003674 "molecular_function" evidence=ND

GO:0055123 "digestive system development" evidence=IMP

GO:0001889 "liver development" evidence=IMP

GO:0070971 "endoplasmic reticulum exit site" evidence=IDA

GO:0007029 "endoplasmic reticulum organization" evidence=IMP

GO:0051216 "cartilage development" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0070278 "extracellular matrix constituent secretion" evidence=IMP

GO:0005622 "intracellular" evidence=ISS

MGI|MGI:99832 Sec13 "SEC13 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
 Identities = 188/315 (59%), Positives = 231/315 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   LIA
Sbjct:     1 MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
             AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct:   112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query:   180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
                +     K+  SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct:   171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query:   239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             IASCSQD +V IWT +D     W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct:   231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query:   297 ENTDGAWQCITEMGK 311
             E+ DG W CI+++ K
Sbjct:   291 ESVDGQWVCISDVNK 305

GO:0005634 "nucleus" evidence=IEA

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005643 "nuclear pore" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0031080 "nuclear pore outer ring" evidence=ISO

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0051028 "mRNA transport" evidence=IEA

RGD|1359555 Sec13 "SEC13 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
 Identities = 188/315 (59%), Positives = 231/315 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN        Q   LIA
Sbjct:     1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RN------GGQ--ILIA 51

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
             +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIW+ +NG W K +E++ HDSSVNS+ W
Sbjct:    52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCW 111

Query:   121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDL 179
             AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct:   112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQ 170

Query:   180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
                +     K+  SGGCDNLIK+W++E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct:   171 PSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230

Query:   239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             IASCSQD +V IWT +D     W+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct:   231 IASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290

Query:   297 ENTDGAWQCITEMGK 311
             E+ DG W CI+++ K
Sbjct:   291 ESVDGQWVCISDVNK 305

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0031080 "nuclear pore outer ring" evidence=ISO;ISS

GO:0051028 "mRNA transport" evidence=IEA

GO:0000776 "kinetochore" evidence=ISO

FB|FBgn0024509 Sec13 "Sec13 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)]

 Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
 Identities = 174/306 (56%), Positives = 225/306 (73%)

Query:     1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
             MVS L  +DT HEDM+H A +D+ GL LATCSSD +V++F+  +N K           +A
Sbjct:    31 MVSLLQEIDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFHSRKNNKA----------LA 80

Query:    61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-NWFKYYEYNNHDSSVNSIA 119
             ELKGH GPVWQVAWAHP+FG +LASCSYDRKVI+W+     +W K YEY+NHDSSVNS+ 
Sbjct:    81 ELKGHQGPVWQVAWAHPKFGNILASCSYDRKVIVWKSTTPRDWTKLYEYSNHDSSVNSVD 140

Query:   120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELD 178
             +AP E+GL+LAC SSDG++S LT  ++   W+++KI  AHTIG NA+SW P        D
Sbjct:   141 FAPSEYGLVLACASSDGSVSVLTCNTEYGVWDAKKIPNAHTIGVNAISWCPAQAPDPAFD 200

Query:   179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              + +      KRLVSGGCDNL+KIW+++ D+W+EE +LE HSDWVRDVAWAPS GL +  
Sbjct:   201 QRVTSRSAAVKRLVSGGCDNLVKIWREDNDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQ 260

Query:   239 IASCSQDRKVIIWTSN-DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
             IA+ SQDR VI+W+SN D   WT  +++TFDD VW++SWS TG+IL V+ GDN+V+LWKE
Sbjct:   261 IATASQDRHVIVWSSNADLSEWTSTVLHTFDDAVWSISWSTTGNILAVTGGDNNVTLWKE 320

Query:   298 NTDGAW 303
             NT+G W
Sbjct:   321 NTEGQW 326

GO:0006900 "membrane budding" evidence=ISS

GO:0008363 "larval chitin-based cuticle development" evidence=IMP

GO:0035293 "chitin-based larval cuticle pattern formation" evidence=IMP

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0031080 "nuclear pore outer ring" evidence=ISS

GO:0007184 "SMAD protein import into nucleus" evidence=IMP

GO:0006607 "NLS-bearing substrate import into nucleus" evidence=IMP

DICTYBASE|DDB_G0292052 sec13 "putative transport protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
 Identities = 157/304 (51%), Positives = 209/304 (68%)

Query:     8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
             VD+GHEDM+HDA+ DY G +LATCSSD  +K+F++     ++  H      + +L+GH G
Sbjct:     6 VDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGG---ENPQH------LVDLRGHEG 56

Query:    68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
             PVWQVAWAHP+FG +LAS SYDRKVI+W+   N +W   ++Y  H+ SVNSI+WAP EFG
Sbjct:    57 PVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFG 116

Query:   127 LILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
             L LAC SSDG+++   Y  + N WE+ +KI    IG N+VSW P     S ++   + + 
Sbjct:   117 LSLACASSDGSVTIHNY--NNNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIP 174

Query:   186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
                KR+V+G CDNLIKI+K   DKWI + +LE+H DWVRDVAWAP+ GL    IASCSQD
Sbjct:   175 APIKRIVTGSCDNLIKIFKNVEDKWILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQD 234

Query:   246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
             R VI+WT ++   W+   +  FDD+VW VSWS+ G+IL VSCGDN V+LWKE  D  W+ 
Sbjct:   235 RSVIVWTQDENGVWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKL 294

Query:   306 ITEM 309
             I+ +
Sbjct:   295 ISHV 298

GO:0003674 "molecular_function" evidence=ND

GO:0030127 "COPII vesicle coat" evidence=ISS

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0005643 "nuclear pore" evidence=IEA;ISS

GO:0051028 "mRNA transport" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

POMBASE|SPBC215.15 sec13 "COPII-coated vesicle component Sec13" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
 Identities = 154/309 (49%), Positives = 198/309 (64%)

Query:     5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
             +  VDT H+DMIHDA +DY G  LATCSSD T+KVF+++ N +         TL+  L+G
Sbjct:     1 MTTVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQ---------TLLETLRG 51

Query:    65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
             HSGPVWQ+ WAHP+FGT+LAS SYD  VI+WR   G W +  ++  H +SVN+++WAP E
Sbjct:    52 HSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVSWAPHE 111

Query:   125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
             +G +LAC SSDG +S L +  D  S ++R   AH  GCNAV W P   SLS   +  S  
Sbjct:   112 YGALLACASSDGKVSVLEFKDD-GSCDTRIFTAHEPGCNAVCWSPP--SLSGSVVGQSPA 168

Query:   185 GGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
              G  K+L + GCDNL+KIW  +   + WI E  L  H DW RDVAWAPS GL+K  +AS 
Sbjct:   169 AG-PKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASA 227

Query:   243 SQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
             SQD+ V IWT      W  TP     F D+ W VSWSL+G+IL VSCGDN V L+KE+ +
Sbjct:   228 SQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKESQN 287

Query:   301 GAWQCITEM 309
               WQ + E+
Sbjct:   288 -KWQLLNEL 295

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005643 "nuclear pore" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=IC

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO

GO:0006999 "nuclear pore organization" evidence=ISO

GO:0030127 "COPII vesicle coat" evidence=ISO

GO:0051028 "mRNA transport" evidence=IEA

GO:0071937 "barrier septum assembly involved in cell cycle cytokinesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A2QHM1	SEC13_ASPNC	No assigned EC number	0.4736	0.9182	0.9480	yes	N/A
Q2UG43	SEC13_ASPOR	No assigned EC number	0.4627	0.8710	0.9421	yes	N/A
P0CS50	SEC13_CRYNJ	No assigned EC number	0.4528	0.9213	0.8643	yes	N/A
P53024	SEC13_PICPG	No assigned EC number	0.4870	0.8742	0.9619	yes	N/A
Q6FNV4	SC131_CANGA	No assigned EC number	0.4568	0.8993	0.9597	yes	N/A
Q75BS2	SEC13_ASHGO	No assigned EC number	0.4560	0.8962	0.9661	yes	N/A
Q6CSZ5	SEC13_KLULA	No assigned EC number	0.4719	0.8993	0.9470	yes	N/A
Q3ZCC9	SEC13_BOVIN	No assigned EC number	0.5936	0.9465	0.9347	yes	N/A
Q5XFW8	SEC13_RAT	No assigned EC number	0.5936	0.9465	0.9347	yes	N/A
Q9D1M0	SEC13_MOUSE	No assigned EC number	0.5936	0.9465	0.9347	yes	N/A
Q54DS8	SEC13_DICDI	No assigned EC number	0.5164	0.9150	0.9667	yes	N/A
Q6BIR1	SEC13_DEBHA	No assigned EC number	0.4610	0.9025	0.9663	yes	N/A
Q4WNK7	SEC13_ASPFU	No assigned EC number	0.4757	0.8773	0.9117	yes	N/A
P55735	SEC13_HUMAN	No assigned EC number	0.6063	0.9465	0.9347	yes	N/A
Q9N4A7	SEC13_CAEEL	No assigned EC number	0.3824	0.9276	0.9424	yes	N/A
Q5B563	SEC13_EMENI	No assigned EC number	0.4705	0.9213	0.9482	yes	N/A
Q04491	SEC13_YEAST	No assigned EC number	0.4466	0.9025	0.9663	yes	N/A
O94319	SEC13_SCHPO	No assigned EC number	0.4983	0.9150	0.9797	yes	N/A
A3LNW3	SEC13_PICST	No assigned EC number	0.4415	0.9150	0.9635	yes	N/A
Q6BZX5	SEC13_YARLI	No assigned EC number	0.4848	0.8805	0.9395	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	318
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-29
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-28
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-22
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-19
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-19
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-06
smart00320	40	smart00320, WD40, WD40 repeats	1e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
smart00320	40	smart00320, WD40, WD40 repeats	0.003

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  113 bits (285), Expect = 1e-29
 Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 53/276 (19%)

Query: 25  GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
           G YLA+ SSD T+++++L           + G  +  L GH+  V  VA+  P  G +L+
Sbjct: 63  GTYLASGSSDKTIRLWDL-----------ETGECVRTLTGHTSYVSSVAF-SPD-GRILS 109

Query: 85  SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
           S S D+ + +W  + G          H   VNS+A++P   G  +A  S DGTI     +
Sbjct: 110 SSSRDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSP--DGTFVASSSQDGTI----KL 161

Query: 145 SDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW 203
            D  + +    +  HT   N+V++ P                   ++L+S   D  IK+W
Sbjct: 162 WDLRTGKCVATLTGHTGEVNSVAFSPD-----------------GEKLLSSSSDGTIKLW 204

Query: 204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI 263
                K +    L  H + V  VA++P   L    +AS S+D  + +W   D  T     
Sbjct: 205 DLSTGKCLGT--LRGHENGVNSVAFSPDGYL----LASGSEDGTIRVW---DLRTGEC-- 253

Query: 264 MNTF---DDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           + T     + V +++WS  G  L     D ++ +W 
Sbjct: 254 VQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  109 bits (275), Expect = 5e-28
 Identities = 77/307 (25%), Positives = 120/307 (39%), Gaps = 61/307 (19%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
            GH   +        G  LAT S D T+KV++L+            G L+  LKGH+GPV
Sbjct: 6   KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLET-----------GELLRTLKGHTGPV 54

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
             VA +    GT LAS S D+ + +W  + G          H S V+S+A++P   G IL
Sbjct: 55  RDVAASA--DGTYLASGSSDKTIRLWDLETGE--CVRTLTGHTSYVSSVAFSPD--GRIL 108

Query: 130 ACGSSDGTISFLTYMSDTNSWESRK------IAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
           +  S D TI           W+         +  HT   N+V++ P              
Sbjct: 109 SSSSRDKTIKV---------WDVETGKCLTTLRGHTDWVNSVAFSPD------------- 146

Query: 184 LGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC 242
                   V+    D  IK+W  +         L  H+  V  VA++P        + S 
Sbjct: 147 -----GTFVASSSQDGTIKLW--DLRTGKCVATLTGHTGEVNSVAFSP----DGEKLLSS 195

Query: 243 SQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG 301
           S D  + +W   D  T      +   ++ V +V++S  G +L     D ++ +W   T  
Sbjct: 196 SSDGTIKLW---DLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE 252

Query: 302 AWQCITE 308
             Q ++ 
Sbjct: 253 CVQTLSG 259

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 93.6 bits (233), Expect = 4e-22
 Identities = 71/241 (29%), Positives = 102/241 (42%), Gaps = 40/241 (16%)

Query: 58  LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNS 117
           L   LKGH+G V  VA+  P  G LLA+ S D  + +W  + G   +  +   H   V  
Sbjct: 1   LRRTLKGHTGGVTCVAF-SPD-GKLLATGSGDGTIKVWDLETGELLRTLK--GHTGPVRD 56

Query: 118 IAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSEL 177
           +A +    G  LA GSSD TI      +       R +  HT   ++V++          
Sbjct: 57  VAASA--DGTYLASGSSDKTIRLWDLETGE---CVRTLTGHTSYVSSVAF---------- 101

Query: 178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC 237
               S  G +   L S   D  IK+W  E  K    T L  H+DWV  VA++P       
Sbjct: 102 ----SPDGRI---LSSSSRDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSP----DGT 148

Query: 238 MIASCSQDRKVIIWTSNDYVTWTPFIMNTF---DDVVWNVSWSLTGDILTVSCGDNSVSL 294
            +AS SQD  + +W   D  T     + T       V +V++S  G+ L  S  D ++ L
Sbjct: 149 FVASSSQDGTIKLW---DLRTGKC--VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKL 203

Query: 295 W 295
           W
Sbjct: 204 W 204

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 90.9 bits (224), Expect = 2e-20
 Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 42/292 (14%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP 68
            GH + +        G  LA+ SS D T+K+++L             G  ++ L GH+ P
Sbjct: 152 EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR-----------TGKPLSTLAGHTDP 200

Query: 69  VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLI 128
           V  +A+  P  G L+AS S D  + +W    G   +     + DS V+S +      G +
Sbjct: 201 VSSLAF-SPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP----DGSL 255

Query: 129 LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
           LA GSSDGTI        ++S   R ++ H+    +V++ P                   
Sbjct: 256 LASGSSDGTIRLWDL--RSSSSLLRTLSGHSSSVLSVAFSP-----------------DG 296

Query: 189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV 248
           K L SG  D  +++W  E  K +    L+ H   V  ++++P       +++  S D  +
Sbjct: 297 KLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPD---GSLLVSGGSDDGTI 353

Query: 249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
            +W   D  T  P         V +VS+S  G +++    D +V LW  +T 
Sbjct: 354 RLW---DLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTG 402

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 39/196 (19%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
            GH D ++       G ++A+ S D T+K+++L             G  +A L GH+G V
Sbjct: 132 RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR-----------TGKCVATLTGHTGEV 180

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
             VA+  P  G  L S S D  + +W    G          H++ VNS+A++P   G +L
Sbjct: 181 NSVAF-SPD-GEKLLSSSSDGTIKLWDLSTGKCLGTLRG--HENGVNSVAFSPD--GYLL 234

Query: 130 ACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA 188
           A GS DGTI     + D  + E  + ++ HT    +++W P                   
Sbjct: 235 ASGSEDGTI----RVWDLRTGECVQTLSGHTNSVTSLAWSPD-----------------G 273

Query: 189 KRLVSGGCDNLIKIWK 204
           KRL SG  D  I+IW 
Sbjct: 274 KRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 87.8 bits (216), Expect = 3e-19
 Identities = 75/330 (22%), Positives = 124/330 (37%), Gaps = 49/330 (14%)

Query: 6   NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
           +L+  GHED I        G  L + SSD T+K+++LD         + +  + +    H
Sbjct: 58  SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLD---------NGEKLIKSLEGLH 108

Query: 66  SGPVWQVAWAHPQFGTLLASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
              V ++A + P   ++L + S  D  V +W               H  SV S+A++P  
Sbjct: 109 DSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK-LIRTLEGHSESVTSLAFSPDG 167

Query: 125 FGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGP-------------- 169
             L+ +  S DGTI       D  + +    +A HT   +++++ P              
Sbjct: 168 -KLLASGSSLDGTIKLW----DLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGT 222

Query: 170 ------GIGSLSELDLKGSKLGGVA------KRLVSGGCDNLIKIWKQEGDKWIEETKLE 217
                   G L    L G     V+        L SG  D  I++W            L 
Sbjct: 223 IRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSS-SLLRTLS 281

Query: 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS 277
            HS  V  VA++P   L    +AS S D  V +W        +   +   +  V ++S+S
Sbjct: 282 GHSSSVLSVAFSPDGKL----LASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFS 337

Query: 278 LTGDILTVSCG-DNSVSLWKENTDGAWQCI 306
             G +L      D ++ LW   T    + +
Sbjct: 338 PDGSLLVSGGSDDGTIRLWDLRTGKPLKTL 367

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 66.3 bits (160), Expect = 4e-12
 Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 42/294 (14%)

Query: 19  AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ 78
           A     GL +A+ SSD T+++++L          S    L + L GHS     V+   P 
Sbjct: 205 AFSPDGGLLIASGSSDGTIRLWDL----------STGKLLRSTLSGHSD--SVVSSFSPD 252

Query: 79  FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI 138
            G+LLAS S D  + +W   + +       + H SSV S+A++P     +LA GSSDGT+
Sbjct: 253 -GSLLASGSSDGTIRLWDLRSSSS-LLRTLSGHSSSVLSVAFSPDGK--LLASGSSDGTV 308

Query: 139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN 198
                +       S  +  H    +++S+ P    L                +  G  D 
Sbjct: 309 RLWD-LETGKLLSSLTLKGHEGPVSSLSFSPDGSLL----------------VSGGSDDG 351

Query: 199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT 258
            I++W     +  +  K       V  V+++P       +++S S D  V +W  +    
Sbjct: 352 TIRLWD---LRTGKPLKTLEGHSNVLSVSFSPDGR----VVSSGSTDGTVRLW--DLSTG 402

Query: 259 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT 312
                ++     V ++ +S  G  L     DN++ LW   T       +  GK 
Sbjct: 403 SLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKV 456

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 15/137 (10%)

Query: 3   SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL 62
           S L    +GH   +        G  LA+ SSD TV++++L+                  L
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLS---------SLTL 324

Query: 63  KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP 122
           KGH GPV  +++  P    L++  S D  + +W    G   K  E     S+V S++++P
Sbjct: 325 KGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE---GHSNVLSVSFSP 380

Query: 123 KEFGLILACGSSDGTIS 139
                +++ GS+DGT+ 
Sbjct: 381 DGR--VVSSGSTDGTVR 395

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW 95
           G L+  LKGH+GPV  VA++    G  LAS S D  + +W
Sbjct: 1  SGELLKTLKGHTGPVTSVAFSP--DGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW 95
          G L+  LKGH+GPV  VA+  P  G LLAS S D  V +W
Sbjct: 1  GKLLRTLKGHTGPVTSVAF-SPD-GNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 214 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
             L+ H+  V  VA++P       ++AS S D  V +W
Sbjct: 5   RTLKGHTGPVTSVAFSPD----GNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.6 bits (80), Expect = 0.003
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
                  L+ H+  V  VA++P        +AS S D  + +W
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPD----GKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	318
KOG1332|consensus	299		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG2445|consensus	361		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0263|consensus	707		100.0
KOG0645|consensus	312		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0279|consensus	315		100.0
KOG0263|consensus	707		100.0
KOG0284|consensus	464		100.0
KOG0295|consensus	406		100.0
KOG0285|consensus	460		100.0
KOG0645|consensus	312		100.0
KOG0277|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0319|consensus	775		100.0
KOG0643|consensus	327		100.0
KOG0265|consensus	338		100.0
KOG0313|consensus	423		100.0
KOG0266|consensus	456		100.0
KOG0266|consensus	456		100.0
KOG0316|consensus	307		100.0
KOG0281|consensus	499		100.0
KOG0264|consensus	422		100.0
KOG0281|consensus	499		100.0
KOG0276|consensus	794		100.0
KOG0292|consensus	1202		100.0
KOG0273|consensus	524		100.0
KOG0284|consensus	464		100.0
KOG0276|consensus	794		100.0
KOG0286|consensus	343		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0318|consensus	603		100.0
KOG0278|consensus	334		100.0
KOG0291|consensus	893		100.0
KOG0283|consensus	712		100.0
KOG0292|consensus	1202		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0293|consensus	519		100.0
KOG0282|consensus	503		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0319|consensus	775		100.0
KOG0268|consensus	433		100.0
KOG0285|consensus	460		99.98
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.98
KOG0315|consensus	311		99.98
KOG0291|consensus	893		99.97
KOG0296|consensus	399		99.97
KOG0265|consensus	338		99.97
KOG0310|consensus	487		99.97
KOG1407|consensus	313		99.97
KOG0318|consensus	603		99.97
PTZ00420	568	coronin; Provisional	99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0316|consensus	307		99.97
KOG0313|consensus	423		99.97
KOG0640|consensus	430		99.97
KOG0275|consensus	508		99.97
KOG0277|consensus	311		99.97
KOG0973|consensus	942		99.97
KOG0274|consensus	537		99.97
KOG0301|consensus	745		99.97
KOG0274|consensus	537		99.97
KOG0305|consensus	484		99.97
KOG0300|consensus	481		99.96
KOG0294|consensus	362		99.96
KOG0296|consensus	399		99.96
KOG0308|consensus	735		99.96
KOG0288|consensus	459		99.96
KOG0306|consensus	888		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0289|consensus	506		99.96
KOG0301|consensus	745		99.96
KOG0299|consensus	479		99.96
KOG0289|consensus	506		99.96
KOG0264|consensus	422		99.96
KOG0641|consensus	350		99.95
KOG0269|consensus	839		99.95
KOG0302|consensus	440		99.95
KOG1332|consensus	299		99.95
KOG1446|consensus	311		99.95
KOG0299|consensus	479		99.95
KOG0278|consensus	334		99.95
KOG0308|consensus	735		99.95
KOG0647|consensus	347		99.95
KOG0306|consensus	888		99.94
KOG0288|consensus	459		99.94
KOG0293|consensus	519		99.94
KOG0300|consensus	481		99.94
KOG4283|consensus	397		99.94
KOG0772|consensus	641		99.94
KOG0310|consensus	487		99.94
KOG1407|consensus	313		99.94
KOG0640|consensus	430		99.94
KOG0282|consensus	503		99.94
KOG0302|consensus	440		99.94
KOG1274|consensus	933		99.94
KOG2096|consensus	420		99.93
KOG0267|consensus	825		99.93
KOG0270|consensus	463		99.93
KOG0275|consensus	508		99.93
KOG0647|consensus	347		99.92
KOG1538|consensus	1081		99.92
KOG0973|consensus	942		99.92
KOG0641|consensus	350		99.92
KOG0772|consensus	641		99.92
KOG1408|consensus	1080		99.92
KOG0305|consensus	484		99.92
KOG0269|consensus	839		99.92
KOG1063|consensus	764		99.91
KOG1036|consensus	323		99.91
KOG0283|consensus	712		99.91
KOG2445|consensus	361		99.91
KOG0646|consensus	476		99.91
KOG0267|consensus	825		99.9
KOG4283|consensus	397		99.9
KOG0268|consensus	433		99.9
KOG0307|consensus	1049		99.9
KOG1273|consensus	405		99.9
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG0639|consensus	705		99.89
KOG0270|consensus	463		99.89
KOG1446|consensus	311		99.89
KOG0321|consensus	720		99.89
KOG1063|consensus	764		99.89
KOG1036|consensus	323		99.89
KOG0643|consensus	327		99.88
KOG4328|consensus	498		99.88
KOG0639|consensus	705		99.88
KOG0650|consensus	733		99.87
KOG0290|consensus	364		99.87
KOG0294|consensus	362		99.87
KOG2048|consensus	691		99.87
KOG1034|consensus	385		99.87
KOG1539|consensus	910		99.87
KOG2096|consensus	420		99.86
KOG1523|consensus	361		99.86
KOG1188|consensus	376		99.86
KOG1445|consensus	1012		99.85
KOG1007|consensus	370		99.85
KOG2106|consensus	626		99.85
KOG0642|consensus	577		99.85
KOG4378|consensus	673		99.84
KOG1274|consensus	933		99.84
KOG1009|consensus	434		99.83
KOG4227|consensus	609		99.83
KOG4328|consensus	498		99.83
KOG1408|consensus	1080		99.83
KOG2055|consensus	514		99.83
COG2319	466	FOG: WD40 repeat [General function prediction only	99.83
KOG0646|consensus	476		99.83
KOG0307|consensus	1049		99.83
KOG0644|consensus	1113		99.83
KOG2919|consensus	406		99.83
KOG0303|consensus	472		99.82
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.82
KOG1587|consensus	555		99.81
KOG0321|consensus	720		99.81
KOG0303|consensus	472		99.81
KOG2106|consensus	626		99.8
KOG2048|consensus	691		99.8
KOG0649|consensus	325		99.8
KOG0642|consensus	577		99.8
KOG0290|consensus	364		99.79
KOG1007|consensus	370		99.79
KOG4378|consensus	673		99.78
KOG0322|consensus	323		99.78
KOG1524|consensus	737		99.77
KOG1034|consensus	385		99.77
COG2319	466	FOG: WD40 repeat [General function prediction only	99.77
PRK11028	330	6-phosphogluconolactonase; Provisional	99.77
KOG1539|consensus	910		99.77
KOG1538|consensus	1081		99.72
KOG2919|consensus	406		99.72
KOG1310|consensus	758		99.71
KOG1009|consensus	434		99.71
KOG1963|consensus	792		99.7
KOG2110|consensus	391		99.7
KOG0771|consensus	398		99.69
KOG1517|consensus	1387		99.69
KOG1445|consensus	1012		99.68
KOG1587|consensus	555		99.68
PRK11028	330	6-phosphogluconolactonase; Provisional	99.67
KOG1273|consensus	405		99.67
KOG2055|consensus	514		99.67
PRK01742	429	tolB translocation protein TolB; Provisional	99.67
PRK01742	429	tolB translocation protein TolB; Provisional	99.67
KOG1334|consensus	559		99.65
KOG1188|consensus	376		99.65
KOG1240|consensus	1431		99.64
KOG1523|consensus	361		99.63
KOG1517|consensus	1387		99.62
KOG1963|consensus	792		99.62
KOG0650|consensus	733		99.61
KOG0771|consensus	398		99.6
KOG0649|consensus	325		99.59
KOG2111|consensus	346		99.56
KOG1524|consensus	737		99.56
KOG0322|consensus	323		99.56
KOG0644|consensus	1113		99.55
KOG1310|consensus	758		99.54
KOG4227|consensus	609		99.54
KOG1354|consensus	433		99.52
KOG2394|consensus	636		99.51
KOG2110|consensus	391		99.5
KOG2394|consensus	636		99.5
KOG0974|consensus	967		99.49
KOG2111|consensus	346		99.47
KOG1272|consensus	545		99.47
PRK05137	435	tolB translocation protein TolB; Provisional	99.46
PRK03629	429	tolB translocation protein TolB; Provisional	99.45
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.43
PRK02889	427	tolB translocation protein TolB; Provisional	99.43
PRK03629	429	tolB translocation protein TolB; Provisional	99.43
PRK04922	433	tolB translocation protein TolB; Provisional	99.43
KOG2321|consensus	703		99.41
KOG4497|consensus	447		99.41
KOG2139|consensus	445		99.4
PRK02889	427	tolB translocation protein TolB; Provisional	99.38
PRK04922	433	tolB translocation protein TolB; Provisional	99.38
KOG3881|consensus	412		99.37
KOG1334|consensus	559		99.35
PRK05137	435	tolB translocation protein TolB; Provisional	99.35
KOG1240|consensus	1431		99.34
KOG3881|consensus	412		99.34
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.33
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.31
KOG1272|consensus	545		99.3
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.28
KOG0974|consensus	967		99.28
KOG0280|consensus	339		99.27
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.24
KOG2139|consensus	445		99.23
KOG0280|consensus	339		99.21
KOG1409|consensus	404		99.2
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.19
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.18
PRK04792	448	tolB translocation protein TolB; Provisional	99.13
PRK01029	428	tolB translocation protein TolB; Provisional	99.13
PRK00178	430	tolB translocation protein TolB; Provisional	99.12
KOG1409|consensus	404		99.11
KOG4547|consensus	541		99.11
KOG2041|consensus	1189		99.1
PRK04792	448	tolB translocation protein TolB; Provisional	99.07
PRK00178	430	tolB translocation protein TolB; Provisional	99.06
KOG1064|consensus	2439		99.06
PRK01029	428	tolB translocation protein TolB; Provisional	99.04
KOG1354|consensus	433		99.02
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.01
KOG4497|consensus	447		99.01
KOG1064|consensus	2439		98.99
KOG4547|consensus	541		98.97
KOG2321|consensus	703		98.96
KOG0309|consensus	1081		98.95
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.95
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.94
KOG4190|consensus	1034		98.93
KOG0309|consensus	1081		98.93
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.92
KOG3914|consensus	390		98.91
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.91
KOG4532|consensus	344		98.88
KOG2315|consensus	566		98.86
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.78
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	98.78
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.76
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.75
KOG0882|consensus	558		98.75
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.71
KOG3914|consensus	390		98.7
KOG0882|consensus	558		98.7
KOG4190|consensus	1034		98.69
KOG4714|consensus	319		98.67
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.64
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.59
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.58
KOG1912|consensus	1062		98.53
KOG2314|consensus	698		98.51
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.49
KOG4714|consensus	319		98.47
KOG2695|consensus	425		98.45
KOG4532|consensus	344		98.43
PRK04043	419	tolB translocation protein TolB; Provisional	98.41
KOG1645|consensus	463		98.41
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.32
KOG2314|consensus	698		98.3
KOG2114|consensus	933		98.27
COG4946	668	Uncharacterized protein related to the periplasmic	98.26
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.25
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.24
KOG2041|consensus	1189		98.23
KOG2066|consensus	846		98.22
KOG2066|consensus	846		98.2
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.2
COG4946	668	Uncharacterized protein related to the periplasmic	98.13
KOG2695|consensus	425		98.11
KOG1920|consensus	1265		98.1
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.09
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.07
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.03
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.99
KOG3617|consensus	1416		97.98
KOG1275|consensus	1118		97.98
PRK04043	419	tolB translocation protein TolB; Provisional	97.97
KOG4441|consensus	571		97.96
KOG2315|consensus	566		97.95
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.94
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.91
KOG1275|consensus	1118		97.91
KOG1008|consensus	783		97.85
KOG1912|consensus	1062		97.84
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.77
KOG1920|consensus	1265		97.62
KOG1832|consensus	1516		97.61
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.58
PHA02713	557	hypothetical protein; Provisional	97.56
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.53
KOG1008|consensus	783		97.49
KOG1832|consensus	1516		97.42
KOG3621|consensus	726		97.4
KOG1645|consensus	463		97.39
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.34
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.25
KOG2114|consensus	933		97.22
PHA02713	557	hypothetical protein; Provisional	97.21
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	97.2
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.04
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.03
KOG3621|consensus	726		97.03
KOG4640|consensus	665		96.97
KOG3617|consensus	1416		96.84
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.83
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.8
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	96.75
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.61
KOG4441|consensus	571		96.53
KOG4640|consensus	665		96.45
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.35
PHA03098	534	kelch-like protein; Provisional	96.25
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.24
PHA02790	480	Kelch-like protein; Provisional	96.21
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.19
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	96.14
KOG2444|consensus	238		96.09
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	96.09
PRK13616	591	lipoprotein LpqB; Provisional	96.09
PHA02790	480	Kelch-like protein; Provisional	96.07
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	95.96
PHA03098	534	kelch-like protein; Provisional	95.88
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	95.78
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.47
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	95.45
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	95.42
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	95.3
KOG2395|consensus	644		95.24
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	94.91
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	94.61
KOG2079|consensus	1206		94.43
PRK02888	635	nitrous-oxide reductase; Validated	94.26
KOG2444|consensus	238		94.14
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.02
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	93.98
KOG4649|consensus	354		93.96
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	93.84
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	93.71
KOG2079|consensus	1206		93.35
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	93.24
KOG2395|consensus	644		92.93
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	91.74
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	91.01
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	90.95
PRK02888	635	nitrous-oxide reductase; Validated	90.73
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	90.64
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	89.86
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	89.85
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	89.74
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	89.69
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	89.67
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	89.56
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	89.49
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	89.16
KOG4649|consensus	354		88.88
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	88.83
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	87.65
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	87.48
PF14727	418	PHTB1_N: PTHB1 N-terminus	87.19
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	87.1
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	87.03
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	86.8
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	86.46
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	85.93
PRK13616	591	lipoprotein LpqB; Provisional	85.67
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	85.63
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	85.23
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	85.17
KOG3630|consensus	1405		85.1
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	84.56
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	82.91
KOG2377|consensus	657		82.86
COG5167	776	VID27 Protein involved in vacuole import and degra	82.22
TIGR02608	55	delta_60_rpt delta-60 repeat domain. This domain o	81.68
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	81.15

>KOG1332|consensus

Probab=100.00  E-value=1.8e-52  Score=335.84  Aligned_cols=292  Identities=61%  Similarity=1.092  Sum_probs=252.6

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+++++|++.|+++.++-+|++|||||.|++||||.+...        ..-+++.+|.||.++|+.++|.||+.|.+|||
T Consensus         4 q~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n--------~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAS   75 (299)
T KOG1332|consen    4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNN--------GQSKLLAELTGHSGPVWKVAWAHPKFGTILAS   75 (299)
T ss_pred             eehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCC--------CCceeeeEecCCCCCeeEEeecccccCcEeeE
Confidence            5688999999999999999999999999999999998632        11268899999999999999999999999999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccce
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNA  164 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~  164 (318)
                      +++||.|+||+-.++++.+.+....|.+.|++|+|.|.+.+.+|+|++.||.|.+.++... ..+...++ ..|+.+|++
T Consensus        76 csYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g~w~t~ki~~aH~~Gvns  154 (299)
T KOG1332|consen   76 CSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-GGWTTSKIVFAHEIGVNS  154 (299)
T ss_pred             eecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-CCccchhhhhccccccce
Confidence            9999999999999888877777778999999999999999999999999999999988655 23443444 489999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      ++|.|...+....+-..  . +.-+.|++|+.|+.|+||+.+.++++...+|++|.++|++|+|+|..++...+|||+|+
T Consensus       155 Vswapa~~~g~~~~~~~--~-~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~Sq  231 (299)
T KOG1332|consen  155 VSWAPASAPGSLVDQGP--A-AKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQ  231 (299)
T ss_pred             eeecCcCCCccccccCc--c-cccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecC
Confidence            99999644332221111  1 11257999999999999999988887777899999999999999998887889999999


Q ss_pred             CCeEEEEEcCCC-cceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeee
Q psy2762         245 DRKVIIWTSNDY-VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       245 D~~i~vw~~~~~-~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~  309 (318)
                      ||++.||..... ..|....+..+..++|+++||+.|+.|+.++.|+.|.+|.++..|+|+++.+.
T Consensus       232 Dg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gkw~~v~~~  297 (299)
T KOG1332|consen  232 DGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGKWEEVGEV  297 (299)
T ss_pred             CCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCcEEEcccc
Confidence            999999987654 35667777888999999999999999999999999999999999999998874

>KOG0271|consensus

Probab=100.00  E-value=9.8e-46  Score=313.62  Aligned_cols=257  Identities=28%  Similarity=0.406  Sum_probs=216.4

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..||.+.|.+++|+|+|++|+|||.|.|+|+||+..           ..++.+.++|..+|.|++|+|  ||+.||||+.
T Consensus       111 ~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~T-----------eTp~~t~KgH~~WVlcvawsP--Dgk~iASG~~  177 (480)
T KOG0271|consen  111 IAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDT-----------ETPLFTCKGHKNWVLCVAWSP--DGKKIASGSK  177 (480)
T ss_pred             cCCCCCcEEEEEecCCCceEEecCCCceEEeeccCC-----------CCcceeecCCccEEEEEEECC--Ccchhhcccc
Confidence            469999999999999999999999999999999973           356889999999999999974  5999999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC---CCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE---FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~---~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      ||+|++||+.+++.. -..+.+|...|++++|.|-+   ...++|+++.||.|+|||...+.   .+..+.+|+.+|+++
T Consensus       178 dg~I~lwdpktg~~~-g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~---~~~~lsgHT~~VTCv  253 (480)
T KOG0271|consen  178 DGSIRLWDPKTGQQI-GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT---CVRTLSGHTASVTCV  253 (480)
T ss_pred             CCeEEEecCCCCCcc-cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce---EEEEeccCccceEEE
Confidence            999999999887642 23578999999999999843   24589999999999999985443   455677999999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC------------
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG------------  233 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~------------  233 (318)
                      .|.-+                  .+|++||.|++||+|+...+.+  ..++.||..+|+.++.|.++-            
T Consensus       254 rwGG~------------------gliySgS~DrtIkvw~a~dG~~--~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~  313 (480)
T KOG0271|consen  254 RWGGE------------------GLIYSGSQDRTIKVWRALDGKL--CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRK  313 (480)
T ss_pred             EEcCC------------------ceEEecCCCceEEEEEccchhH--HHhhcccchheeeeeccchhhhhcccccccccc
Confidence            99864                  4899999999999999877754  456899999999998884310            


Q ss_pred             --------------------CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         234 --------------------LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       234 --------------------~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                                          ..+..|+|||+|.++.+|+..... .......+|++.|++|.||||++++||++.|++||
T Consensus       314 ~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVk  392 (480)
T KOG0271|consen  314 PKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGHQALVNHVSFSPDGRYIASASFDKSVK  392 (480)
T ss_pred             CCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhchhhheeeEEECCCccEEEEeeccccee
Confidence                                024469999999999999875533 12334568999999999999999999999999999


Q ss_pred             EEEECCCCce
Q psy2762         294 LWKENTDGAW  303 (318)
Q Consensus       294 iW~~~~~~~~  303 (318)
                      +|+..++...
T Consensus       393 LW~g~tGk~l  402 (480)
T KOG0271|consen  393 LWDGRTGKFL  402 (480)
T ss_pred             eeeCCCcchh
Confidence            9997775433

>KOG0272|consensus

Probab=100.00  E-value=1.3e-45  Score=316.23  Aligned_cols=245  Identities=26%  Similarity=0.413  Sum_probs=219.0

Q ss_pred             ecCCCcceeeeeeecCC--CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYL--GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.||.+.|.++.|+|.  +.-||||+.||++++|+++.           ..++..+++|...|-.++| || +|++|+|
T Consensus       212 ~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~-----------e~~l~~l~gH~~RVs~Vaf-HP-sG~~L~T  278 (459)
T KOG0272|consen  212 TLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQ-----------ETPLQDLEGHLARVSRVAF-HP-SGKFLGT  278 (459)
T ss_pred             EEeccccceeeEEEccCCCccceeeeccCCceeeeccCC-----------Ccchhhhhcchhhheeeee-cC-CCceeee
Confidence            45799999999999997  67899999999999999872           2578899999999999999 55 6999999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      +++|.+.++||+.+.....  -.+||...|.+|+|+||  +.++++|+.|..-+|||++.+.   .+..+.+|..+|..+
T Consensus       279 asfD~tWRlWD~~tk~ElL--~QEGHs~~v~~iaf~~D--GSL~~tGGlD~~~RvWDlRtgr---~im~L~gH~k~I~~V  351 (459)
T KOG0272|consen  279 ASFDSTWRLWDLETKSELL--LQEGHSKGVFSIAFQPD--GSLAATGGLDSLGRVWDLRTGR---CIMFLAGHIKEILSV  351 (459)
T ss_pred             cccccchhhcccccchhhH--hhcccccccceeEecCC--CceeeccCccchhheeecccCc---EEEEecccccceeeE
Confidence            9999999999999875333  34699999999999999  7899999999999999998776   456777999999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|+|+                 |+.|||||.|+++||||++...  +..++.+|..-|..|+|+|.   .|++|+|+|.|
T Consensus       352 ~fsPN-----------------Gy~lATgs~Dnt~kVWDLR~r~--~ly~ipAH~nlVS~Vk~~p~---~g~fL~TasyD  409 (459)
T KOG0272|consen  352 AFSPN-----------------GYHLATGSSDNTCKVWDLRMRS--ELYTIPAHSNLVSQVKYSPQ---EGYFLVTASYD  409 (459)
T ss_pred             eECCC-----------------ceEEeecCCCCcEEEeeecccc--cceecccccchhhheEeccc---CCeEEEEcccC
Confidence            99997                 6899999999999999998765  36778999999999999996   58999999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ++++||...+..  ....+.+|++.|.+|+.+|||++++|++.|+++++|.
T Consensus       410 ~t~kiWs~~~~~--~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  410 NTVKIWSTRTWS--PLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cceeeecCCCcc--cchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            999999887754  2456789999999999999999999999999999995

>KOG0272|consensus

Probab=100.00  E-value=8.7e-44  Score=305.07  Aligned_cols=254  Identities=23%  Similarity=0.381  Sum_probs=223.5

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC-CCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ-FGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~~~~las~s~   88 (318)
                      .|-+.+|..+.|+++++.|+|||.+|.++||++.           ....+.+|.+|++.|.++.| +|. ++..||||+.
T Consensus       172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~-----------~~~~~~~l~gH~~~v~~~~f-hP~~~~~~lat~s~  239 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVP-----------QCNLLQTLRGHTSRVGAAVF-HPVDSDLNLATASA  239 (459)
T ss_pred             ccCCCcceeeEeecCCCeEEEeecCCceeEeecC-----------CcceeEEEeccccceeeEEE-ccCCCccceeeecc
Confidence            4778899999999999999999999999999986           23678999999999999999 455 4779999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      ||+|++|+..+..  .+..+.+|...|..|+|+|+  +++|++++.|.+-++||+....   ++....+|..+|.+++|.
T Consensus       240 Dgtvklw~~~~e~--~l~~l~gH~~RVs~VafHPs--G~~L~TasfD~tWRlWD~~tk~---ElL~QEGHs~~v~~iaf~  312 (459)
T KOG0272|consen  240 DGTVKLWKLSQET--PLQDLEGHLARVSRVAFHPS--GKFLGTASFDSTWRLWDLETKS---ELLLQEGHSKGVFSIAFQ  312 (459)
T ss_pred             CCceeeeccCCCc--chhhhhcchhhheeeeecCC--Cceeeecccccchhhcccccch---hhHhhcccccccceeEec
Confidence            9999999998764  55678899999999999999  8899999999999999986553   344567999999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+                 |..++|||-|..-||||++++.+  +..+.+|...|.+|.|+|+    |.+|||||.|+++
T Consensus       313 ~D-----------------GSL~~tGGlD~~~RvWDlRtgr~--im~L~gH~k~I~~V~fsPN----Gy~lATgs~Dnt~  369 (459)
T KOG0272|consen  313 PD-----------------GSLAATGGLDSLGRVWDLRTGRC--IMFLAGHIKEILSVAFSPN----GYHLATGSSDNTC  369 (459)
T ss_pred             CC-----------------CceeeccCccchhheeecccCcE--EEEecccccceeeEeECCC----ceEEeecCCCCcE
Confidence            98                 56899999999999999999875  4567899999999999996    9999999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      +|||++....  ...++.|...|..|.|+| .|.+|+|++.|++++||.   +.-|.|++.|+
T Consensus       370 kVWDLR~r~~--ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs---~~~~~~~ksLa  427 (459)
T KOG0272|consen  370 KVWDLRMRSE--LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWS---TRTWSPLKSLA  427 (459)
T ss_pred             EEeeeccccc--ceecccccchhhheEecccCCeEEEEcccCcceeeec---CCCcccchhhc
Confidence            9999987543  456778999999999999 789999999999999997   33467776664

>KOG0271|consensus

Probab=100.00  E-value=4.6e-43  Score=297.41  Aligned_cols=248  Identities=23%  Similarity=0.406  Sum_probs=206.4

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC---CCCCcEEEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH---PQFGTLLAS   85 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~---~~~~~~las   85 (318)
                      -.||+..|.+++++|||+.||||+.||+|++||...+          ......|++|..+|++++|-+   ...+.+|||
T Consensus       153 ~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg----------~~~g~~l~gH~K~It~Lawep~hl~p~~r~las  222 (480)
T KOG0271|consen  153 CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG----------QQIGRALRGHKKWITALAWEPLHLVPPCRRLAS  222 (480)
T ss_pred             ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCC----------CcccccccCcccceeEEeecccccCCCccceec
Confidence            3799999999999999999999999999999997632          245678999999999999952   123679999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC-----------------
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN-----------------  148 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~-----------------  148 (318)
                      +|-||.|+|||...+.  +++.+.+|+.+|+||.|--+   -++.+||.|++|++|+...+.-                 
T Consensus       223 ~skDg~vrIWd~~~~~--~~~~lsgHT~~VTCvrwGG~---gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lals  297 (480)
T KOG0271|consen  223 SSKDGSVRIWDTKLGT--CVRTLSGHTASVTCVRWGGE---GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALS  297 (480)
T ss_pred             ccCCCCEEEEEccCce--EEEEeccCccceEEEEEcCC---ceEEecCCCceEEEEEccchhHHHhhcccchheeeeecc
Confidence            9999999999998775  55667899999999999864   3788999999999996532110                 


Q ss_pred             ---------------C-------------------------------------c-------ceeeecccccccceeeeCC
Q psy2762         149 ---------------S-------------------------------------W-------ESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus       149 ---------------~-------------------------------------~-------~~~~~~~h~~~v~~~~~~p  169 (318)
                                     .                                     |       .+.++.+|+.-|+.+.|||
T Consensus       298 Tdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP  377 (480)
T KOG0271|consen  298 TDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP  377 (480)
T ss_pred             chhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC
Confidence                           0                                     0       0012335666667777777


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +                 +.+||++|-|+.||+||.+++++  +.+|.||-+.|+.|+|+.+    .++|+|||.|.+++
T Consensus       378 d-----------------~r~IASaSFDkSVkLW~g~tGk~--lasfRGHv~~VYqvawsaD----sRLlVS~SkDsTLK  434 (480)
T KOG0271|consen  378 D-----------------GRYIASASFDKSVKLWDGRTGKF--LASFRGHVAAVYQVAWSAD----SRLLVSGSKDSTLK  434 (480)
T ss_pred             C-----------------ccEEEEeecccceeeeeCCCcch--hhhhhhccceeEEEEeccC----ccEEEEcCCCceEE
Confidence            6                 58999999999999999999975  5778999999999999996    88999999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      +|++.+..  ....+++|.+.|+.|+|+|||+.+++|+.|+.+|||.
T Consensus       435 vw~V~tkK--l~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  435 VWDVRTKK--LKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             EEEeeeee--ecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            99998743  2346788999999999999999999999999999995

>KOG2445|consensus

Probab=100.00  E-value=7.2e-39  Score=265.21  Aligned_cols=288  Identities=33%  Similarity=0.689  Sum_probs=233.8

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      ....+++||++-|+++.|++.|+++|+||.|++|+|||..+.       +.+..+....+.|.+.|+.+.|.||.-|+.+
T Consensus         4 s~~pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~-------s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvv   76 (361)
T KOG2445|consen    4 SMAPIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSD-------SGTWSCTSSWRAHDGSIWRVVWAHPEFGQVV   76 (361)
T ss_pred             cccccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCC-------CCceEEeeeEEecCCcEEEEEecCccccceE
Confidence            345578999999999999999999999999999999997532       3456788899999999999999999999999


Q ss_pred             EEEECCCeEEEEeCC-------CCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC--CCcceee
Q psy2762          84 ASCSYDRKVIIWRGD-------NGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT--NSWESRK  154 (318)
Q Consensus        84 as~s~Dg~v~vWd~~-------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~--~~~~~~~  154 (318)
                      |++++|++++||.-.       ..+++...++..-.+.|+.|.|.|...+..+|+++.||++|||+.....  ..|.++.
T Consensus        77 A~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~  156 (361)
T KOG2445|consen   77 ATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQH  156 (361)
T ss_pred             EEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhh
Confidence            999999999999642       1246666667667789999999999889999999999999999764332  2333221


Q ss_pred             -ec-------ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccC--CeEEEEEEcccC
Q psy2762         155 -IA-------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEG--DKWIEETKLENH  219 (318)
Q Consensus       155 -~~-------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~--~~~~~~~~~~~h  219 (318)
                       +.       .+..++.+++|+|.-.              ...+||.|+.+     +.++||....  +++....++.+|
T Consensus       157 Ei~~~~~pp~~~~~~~~CvsWn~sr~--------------~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~  222 (361)
T KOG2445|consen  157 EIQNVIDPPGKNKQPCFCVSWNPSRM--------------HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDH  222 (361)
T ss_pred             hhhhccCCcccccCcceEEeeccccc--------------cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCC
Confidence             11       3566788999997421              12568888777     4788886543  367778889999


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc---------------e---eeEEeeecCCcEEEEEEcCCCC
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT---------------W---TPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~---------------~---~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      +++|++|+|+|..+..-.+||+++.|| |+||.++..+.               .   ...++..|...||.|.|+-.|.
T Consensus       223 ~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGt  301 (361)
T KOG2445|consen  223 TDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGT  301 (361)
T ss_pred             CCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeee
Confidence            999999999999877778999999999 99999875220               0   1223456888999999999999


Q ss_pred             EEEEEeCCCeEEEEEECCCCceEEEeeecccc
Q psy2762         282 ILTVSCGDNSVSLWKENTDGAWQCITEMGKTS  313 (318)
Q Consensus       282 ~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~  313 (318)
                      .|+|+|.||.||+|+.+...+|.|..+|.-+.
T Consensus       302 iLsStGdDG~VRLWkany~n~~kC~sv~~~e~  333 (361)
T KOG2445|consen  302 ILSSTGDDGCVRLWKANYNNLWKCTSVLKAEG  333 (361)
T ss_pred             EEeecCCCceeeehhhhhhhhheeeeEEeccC
Confidence            99999999999999999999999999886543

>KOG0286|consensus

Probab=100.00  E-value=4.5e-38  Score=258.85  Aligned_cols=259  Identities=16%  Similarity=0.220  Sum_probs=217.7

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCC---------------------------------C
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDS---------------------------------H   52 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~---------------------------------~   52 (318)
                      .+++.||...|+++.|++|+++|+|+|+||.+.|||.-..++.+..                                 .
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls  127 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLS  127 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecc
Confidence            4688999999999999999999999999999999997543332210                                 0


Q ss_pred             ----CCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcE
Q psy2762          53 ----SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLI  128 (318)
Q Consensus        53 ----~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~  128 (318)
                          ...-.+.+.+.+|++.+.++.|. +  ...|+++|.|.+..+||+++++  ++..+.+|.+.|.+++++|.+ ...
T Consensus       128 ~~d~~g~~~v~r~l~gHtgylScC~f~-d--D~~ilT~SGD~TCalWDie~g~--~~~~f~GH~gDV~slsl~p~~-~nt  201 (343)
T KOG0286|consen  128 TRDAEGNVRVSRELAGHTGYLSCCRFL-D--DNHILTGSGDMTCALWDIETGQ--QTQVFHGHTGDVMSLSLSPSD-GNT  201 (343)
T ss_pred             cccccccceeeeeecCccceeEEEEEc-C--CCceEecCCCceEEEEEcccce--EEEEecCCcccEEEEecCCCC-CCe
Confidence                00113456799999999999995 2  5778999999999999999986  555678999999999999953 678


Q ss_pred             EEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC
Q psy2762         129 LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD  208 (318)
Q Consensus       129 lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~  208 (318)
                      +++|+.|++.++||.+.+.   ..+.+.+|...|+++.|.|+                 +.-|++||.|+++|+||++..
T Consensus       202 FvSg~cD~~aklWD~R~~~---c~qtF~ghesDINsv~ffP~-----------------G~afatGSDD~tcRlyDlRaD  261 (343)
T KOG0286|consen  202 FVSGGCDKSAKLWDVRSGQ---CVQTFEGHESDINSVRFFPS-----------------GDAFATGSDDATCRLYDLRAD  261 (343)
T ss_pred             EEecccccceeeeeccCcc---eeEeecccccccceEEEccC-----------------CCeeeecCCCceeEEEeecCC
Confidence            9999999999999987653   45667799999999999997                 567999999999999999876


Q ss_pred             eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       209 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      +.+....-+.-...|++|+||..    |++|..|..|.++.+||.-+..  ....+.+|+..|..+..+|||..|++|+.
T Consensus       262 ~~~a~ys~~~~~~gitSv~FS~S----GRlLfagy~d~~c~vWDtlk~e--~vg~L~GHeNRvScl~~s~DG~av~TgSW  335 (343)
T KOG0286|consen  262 QELAVYSHDSIICGITSVAFSKS----GRLLFAGYDDFTCNVWDTLKGE--RVGVLAGHENRVSCLGVSPDGMAVATGSW  335 (343)
T ss_pred             cEEeeeccCcccCCceeEEEccc----ccEEEeeecCCceeEeeccccc--eEEEeeccCCeeEEEEECCCCcEEEecch
Confidence            54444444556678999999985    9999999999999999976543  45678899999999999999999999999


Q ss_pred             CCeEEEEE
Q psy2762         289 DNSVSLWK  296 (318)
Q Consensus       289 D~~v~iW~  296 (318)
                      |.++|||.
T Consensus       336 Ds~lriW~  343 (343)
T KOG0286|consen  336 DSTLRIWA  343 (343)
T ss_pred             hHheeecC
Confidence            99999994

>KOG0315|consensus

Probab=100.00  E-value=2.1e-38  Score=255.51  Aligned_cols=259  Identities=20%  Similarity=0.371  Sum_probs=208.9

Q ss_pred             cceeecCCC-cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           4 QLNLVDTGH-EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         4 ~~~~~~~gH-~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      +.+...--| ...|+.+.+.|++++||.++ ...||+||+++.         ...++.++.+|+..|+++.|-  .+|+.
T Consensus        30 G~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~---------np~Pv~t~e~h~kNVtaVgF~--~dgrW   97 (311)
T KOG0315|consen   30 GICSRTIQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSN---------NPNPVATFEGHTKNVTAVGFQ--CDGRW   97 (311)
T ss_pred             CeEEEEEecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCC---------CCCceeEEeccCCceEEEEEe--ecCeE
Confidence            333333345 45799999999999999877 579999999854         345789999999999999994  47999


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      +++||+||++||||++...+..  .+ .|.++|++|..+|.  +.-|++|..+|.|++||+..+.-..  ..+..-..++
T Consensus        98 MyTgseDgt~kIWdlR~~~~qR--~~-~~~spVn~vvlhpn--QteLis~dqsg~irvWDl~~~~c~~--~liPe~~~~i  170 (311)
T KOG0315|consen   98 MYTGSEDGTVKIWDLRSLSCQR--NY-QHNSPVNTVVLHPN--QTELISGDQSGNIRVWDLGENSCTH--ELIPEDDTSI  170 (311)
T ss_pred             EEecCCCceEEEEeccCcccch--hc-cCCCCcceEEecCC--cceEEeecCCCcEEEEEccCCcccc--ccCCCCCcce
Confidence            9999999999999998743322  23 47799999999998  4567899999999999986543211  1112223456


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC----eEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD----KWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~----~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      .++...|+                 +..++.+...|++++|++.+.    ++++..+++.|+..+..+.+||+    +++
T Consensus       171 ~sl~v~~d-----------------gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd----~k~  229 (311)
T KOG0315|consen  171 QSLTVMPD-----------------GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPD----VKY  229 (311)
T ss_pred             eeEEEcCC-----------------CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCC----CcE
Confidence            77777776                 578999999999999997654    45667788999999999999996    899


Q ss_pred             EEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      ||++|.|++++||+.++... ....+.+|+.+||.++||.||++|++|+.|+++|+|++..+.+.
T Consensus       230 lat~ssdktv~iwn~~~~~k-le~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v  293 (311)
T KOG0315|consen  230 LATCSSDKTVKIWNTDDFFK-LELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEV  293 (311)
T ss_pred             EEeecCCceEEEEecCCcee-eEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCcee
Confidence            99999999999999988622 23456789999999999999999999999999999998887643

>KOG0263|consensus

Probab=100.00  E-value=7.4e-39  Score=293.45  Aligned_cols=253  Identities=25%  Similarity=0.392  Sum_probs=211.5

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCC----cCC------CC---------C-CCCcceEEEEecccccCeEEE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRN----LKK------DD---------S-HSQKGTLIAELKGHSGPVWQV   72 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~----~~~------~~---------~-~~~~~~~~~~~~~h~~~V~~v   72 (318)
                      ...|+|+.|++|+++||.|-.|..|++|.+...    .+.      .+         . .........++.||.++|+.+
T Consensus       378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~  457 (707)
T KOG0263|consen  378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC  457 (707)
T ss_pred             CCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence            347899999999999999999999999987610    000      00         0 011223456799999999999


Q ss_pred             EecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce
Q psy2762          73 AWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES  152 (318)
Q Consensus        73 ~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~  152 (318)
                      +|+|  +.++|+|+|.|++||+|.+.+-.  +...+.+|..+|.+|.|+|-  +.++|+++.|++-++|......   ..
T Consensus       458 sFsP--d~rfLlScSED~svRLWsl~t~s--~~V~y~GH~~PVwdV~F~P~--GyYFatas~D~tArLWs~d~~~---Pl  528 (707)
T KOG0263|consen  458 SFSP--DRRFLLSCSEDSSVRLWSLDTWS--CLVIYKGHLAPVWDVQFAPR--GYYFATASHDQTARLWSTDHNK---PL  528 (707)
T ss_pred             eecc--cccceeeccCCcceeeeecccce--eEEEecCCCcceeeEEecCC--ceEEEecCCCceeeeeecccCC---ch
Confidence            9974  48999999999999999988755  44456699999999999997  8999999999999999864322   34


Q ss_pred             eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCC
Q psy2762         153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW  232 (318)
Q Consensus       153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~  232 (318)
                      +-+.+|-..|.++.|+|+                 ..|+|+||.|.+||+||..++..++  .|.||.++|.+|+|||. 
T Consensus       529 RifaghlsDV~cv~FHPN-----------------s~Y~aTGSsD~tVRlWDv~~G~~VR--iF~GH~~~V~al~~Sp~-  588 (707)
T KOG0263|consen  529 RIFAGHLSDVDCVSFHPN-----------------SNYVATGSSDRTVRLWDVSTGNSVR--IFTGHKGPVTALAFSPC-  588 (707)
T ss_pred             hhhcccccccceEEECCc-----------------ccccccCCCCceEEEEEcCCCcEEE--EecCCCCceEEEEEcCC-
Confidence            455699999999999997                 5799999999999999999887554  46899999999999996 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                         |.+||||+.|+.|++||+....  ....+.+|++.|.+++||.||..||++|.|.+||+||+..
T Consensus       589 ---Gr~LaSg~ed~~I~iWDl~~~~--~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~  650 (707)
T KOG0263|consen  589 ---GRYLASGDEDGLIKIWDLANGS--LVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK  650 (707)
T ss_pred             ---CceEeecccCCcEEEEEcCCCc--chhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence               9999999999999999998754  2344568899999999999999999999999999999754

>KOG0645|consensus

Probab=100.00  E-value=1.7e-37  Score=253.04  Aligned_cols=250  Identities=28%  Similarity=0.524  Sum_probs=212.6

Q ss_pred             ecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ...||++.|-.++++|- |..|||||.|++||||+...+        ....+...+ .+|+..|.+++|+|  .|++||+
T Consensus         9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~--------~s~~ck~vld~~hkrsVRsvAwsp--~g~~La~   78 (312)
T KOG0645|consen    9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG--------DSWTCKTVLDDGHKRSVRSVAWSP--HGRYLAS   78 (312)
T ss_pred             eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC--------CcEEEEEeccccchheeeeeeecC--CCcEEEE
Confidence            56799999999999998 999999999999999998621        234444444 38999999999974  5999999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccccccce
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNA  164 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~~  164 (318)
                      ||+|.++.||.-..+.+.++.++++|...|.||+|+++  +.+||+++.|+.|-||....+.. ++ ...+..|++.|.-
T Consensus        79 aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~s--G~~LATCSRDKSVWiWe~deddE-fec~aVL~~HtqDVK~  155 (312)
T KOG0645|consen   79 ASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSAS--GNYLATCSRDKSVWIWEIDEDDE-FECIAVLQEHTQDVKH  155 (312)
T ss_pred             eeccceEEEeecCCCceeEEeeeeccccceeEEEEcCC--CCEEEEeeCCCeEEEEEecCCCc-EEEEeeeccccccccE
Confidence            99999999998777788888999999999999999998  78999999999999998864432 33 3345589999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +.|+|..                 ..|+++|.|++||+|+.. ...+...+++.+|...|.+++|+|.    |..|++++
T Consensus       156 V~WHPt~-----------------dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~----G~rl~s~s  214 (312)
T KOG0645|consen  156 VIWHPTE-----------------DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI----GSRLVSCS  214 (312)
T ss_pred             EEEcCCc-----------------ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC----CceEEEec
Confidence            9999953                 479999999999999876 6778888999999999999999996    78899999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +|++++||.....      ....|..+++.++|. + -.|||+++|+.+|++....
T Consensus       215 dD~tv~Iw~~~~~------~~~~~sr~~Y~v~W~-~-~~IaS~ggD~~i~lf~~s~  262 (312)
T KOG0645|consen  215 DDGTVSIWRLYTD------LSGMHSRALYDVPWD-N-GVIASGGGDDAIRLFKESD  262 (312)
T ss_pred             CCcceEeeeeccC------cchhcccceEeeeec-c-cceEeccCCCEEEEEEecC
Confidence            9999999975421      122456789999998 4 4899999999999998763

>KOG0279|consensus

Probab=100.00  E-value=1.6e-37  Score=254.17  Aligned_cols=255  Identities=22%  Similarity=0.347  Sum_probs=210.7

Q ss_pred             eeecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      .-.+.||++.|+.++..+. ...|++++.|.++.+|++.+.      ....|++++.++||+..|..+..++  +|++++
T Consensus         8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d------d~~~G~~~r~~~GHsH~v~dv~~s~--dg~~al   79 (315)
T KOG0279|consen    8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD------DIKYGVPVRRLTGHSHFVSDVVLSS--DGNFAL   79 (315)
T ss_pred             eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC------ccccCceeeeeeccceEecceEEcc--CCceEE
Confidence            3467899999999999876 568899999999999999732      3346788999999999999999873  699999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccc
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGC  162 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v  162 (318)
                      |+|+|+++++||+.+++  .+..+.+|...|.+++|+|+  +..+++|+.|++|++|+..-.-    ...+.  .+..-|
T Consensus        80 S~swD~~lrlWDl~~g~--~t~~f~GH~~dVlsva~s~d--n~qivSGSrDkTiklwnt~g~c----k~t~~~~~~~~WV  151 (315)
T KOG0279|consen   80 SASWDGTLRLWDLATGE--STRRFVGHTKDVLSVAFSTD--NRQIVSGSRDKTIKLWNTLGVC----KYTIHEDSHREWV  151 (315)
T ss_pred             eccccceEEEEEecCCc--EEEEEEecCCceEEEEecCC--CceeecCCCcceeeeeeecccE----EEEEecCCCcCcE
Confidence            99999999999999885  55567899999999999999  6689999999999999874221    12222  235678


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      +++.|+|...               ..+|+++|.|++||+||+++.+.  .+.+.||+..|+.+.+|||    |..+++|
T Consensus       152 scvrfsP~~~---------------~p~Ivs~s~DktvKvWnl~~~~l--~~~~~gh~~~v~t~~vSpD----GslcasG  210 (315)
T KOG0279|consen  152 SCVRFSPNES---------------NPIIVSASWDKTVKVWNLRNCQL--RTTFIGHSGYVNTVTVSPD----GSLCASG  210 (315)
T ss_pred             EEEEEcCCCC---------------CcEEEEccCCceEEEEccCCcch--hhccccccccEEEEEECCC----CCEEecC
Confidence            9999999731               24799999999999999987643  4667899999999999996    8899999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.|+.+.+||+.....  .. ...+.+.|.+++|+|+...|+.+ .+..|+|||.+...
T Consensus       211 gkdg~~~LwdL~~~k~--ly-sl~a~~~v~sl~fspnrywL~~a-t~~sIkIwdl~~~~  265 (315)
T KOG0279|consen  211 GKDGEAMLWDLNEGKN--LY-SLEAFDIVNSLCFSPNRYWLCAA-TATSIKIWDLESKA  265 (315)
T ss_pred             CCCceEEEEEccCCce--eE-eccCCCeEeeEEecCCceeEeec-cCCceEEEeccchh
Confidence            9999999999987653  12 22466899999999999888644 56679999988863

>KOG0273|consensus

Probab=100.00  E-value=7.8e-38  Score=271.75  Aligned_cols=251  Identities=25%  Similarity=0.439  Sum_probs=215.2

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .-|++++|+.+|..||+|+.||.+|||+..            |.++.+|..|.++|.++.|+  ..|++|+|++.|+++.
T Consensus       236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~------------G~l~~tl~~HkgPI~slKWn--k~G~yilS~~vD~tti  301 (524)
T KOG0273|consen  236 KDVTSLDWNNDGTLLATGSEDGEARIWNKD------------GNLISTLGQHKGPIFSLKWN--KKGTYILSGGVDGTTI  301 (524)
T ss_pred             CCcceEEecCCCCeEEEeecCcEEEEEecC------------chhhhhhhccCCceEEEEEc--CCCCEEEeccCCccEE
Confidence            479999999999999999999999999975            56889999999999999997  4699999999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +||..++.+.+.  +..|..+...|.|-.+   .-+++++.|+.|.++.+..+.   ....+.+|..+|+.+.|.|.   
T Consensus       302 lwd~~~g~~~q~--f~~~s~~~lDVdW~~~---~~F~ts~td~~i~V~kv~~~~---P~~t~~GH~g~V~alk~n~t---  370 (524)
T KOG0273|consen  302 LWDAHTGTVKQQ--FEFHSAPALDVDWQSN---DEFATSSTDGCIHVCKVGEDR---PVKTFIGHHGEVNALKWNPT---  370 (524)
T ss_pred             EEeccCceEEEe--eeeccCCccceEEecC---ceEeecCCCceEEEEEecCCC---cceeeecccCceEEEEECCC---
Confidence            999988875554  4457777778899865   358999999999999874433   34566789999999999996   


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC-----CCccEEEEEeCCCeE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG-----LSKCMIASCSQDRKV  248 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-----~~~~~l~s~s~D~~i  248 (318)
                                    +..|+++|.|++++||.+.....  ...+.+|...|+.+.|+|++.     ..+..|++++.|.+|
T Consensus       371 --------------g~LLaS~SdD~TlkiWs~~~~~~--~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV  434 (524)
T KOG0273|consen  371 --------------GSLLASCSDDGTLKIWSMGQSNS--VHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTV  434 (524)
T ss_pred             --------------CceEEEecCCCeeEeeecCCCcc--hhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeE
Confidence                          57899999999999999765543  456789999999999999752     256789999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      ++||+....  .+..++.|+.+|++|+|||+|++||+|+.||.|.||+..++..++++.
T Consensus       435 ~lwdv~~gv--~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~  491 (524)
T KOG0273|consen  435 KLWDVESGV--PIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ  491 (524)
T ss_pred             EEEEccCCc--eeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec
Confidence            999998865  355678999999999999999999999999999999988876666554

>KOG0279|consensus

Probab=100.00  E-value=6.6e-37  Score=250.49  Aligned_cols=249  Identities=20%  Similarity=0.299  Sum_probs=202.3

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.+.||...|..++.++||++.+|+|.|+++|+||+.           .++..+.|.+|...|.+++|++  ++..++|
T Consensus        56 ~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~-----------~g~~t~~f~GH~~dVlsva~s~--dn~qivS  122 (315)
T KOG0279|consen   56 VRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLA-----------TGESTRRFVGHTKDVLSVAFST--DNRQIVS  122 (315)
T ss_pred             eeeeeccceEecceEEccCCceEEeccccceEEEEEec-----------CCcEEEEEEecCCceEEEEecC--CCceeec
Confidence            34667999999999999999999999999999999997           3567888999999999999974  5889999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      ||.|++|++||....   +.+++..  +..-|+||.|+|.+.+.++++++.|++|++||+..-.   ......+|+..++
T Consensus       123 GSrDkTiklwnt~g~---ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~---l~~~~~gh~~~v~  196 (315)
T KOG0279|consen  123 GSRDKTIKLWNTLGV---CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ---LRTTFIGHSGYVN  196 (315)
T ss_pred             CCCcceeeeeeeccc---EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc---hhhccccccccEE
Confidence            999999999998754   3334433  3678999999999878899999999999999984322   1223458999999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      .+++||+                 |..+++|+.||.+.+||+..++.  ... .+|...|++++|+|.     ++...+.
T Consensus       197 t~~vSpD-----------------GslcasGgkdg~~~LwdL~~~k~--lys-l~a~~~v~sl~fspn-----rywL~~a  251 (315)
T KOG0279|consen  197 TVTVSPD-----------------GSLCASGGKDGEAMLWDLNEGKN--LYS-LEAFDIVNSLCFSPN-----RYWLCAA  251 (315)
T ss_pred             EEEECCC-----------------CCEEecCCCCceEEEEEccCCce--eEe-ccCCCeEeeEEecCC-----ceeEeec
Confidence            9999998                 57899999999999999988754  233 468899999999994     5666677


Q ss_pred             CCCeEEEEEcCCCcce---eeEE----eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         244 QDRKVIIWTSNDYVTW---TPFI----MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~---~~~~----~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      .+..|+|||++....-   .+..    ...-...-.+++||+||+.|.++-.|+.||+|.+.
T Consensus       252 t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  252 TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             cCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            7888999998875421   1110    01112346789999999999999999999999864

>KOG0263|consensus

Probab=100.00  E-value=2.4e-37  Score=283.55  Aligned_cols=237  Identities=24%  Similarity=0.415  Sum_probs=198.1

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.+.||.++|+.+.|+|+.++|+|||.|++||+|.+.           +...+-.++||..+||.+.|+ | .|.+||||
T Consensus       445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~-----------t~s~~V~y~GH~~PVwdV~F~-P-~GyYFata  511 (707)
T KOG0263|consen  445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLD-----------TWSCLVIYKGHLAPVWDVQFA-P-RGYYFATA  511 (707)
T ss_pred             EEeecCCCceeeeeecccccceeeccCCcceeeeecc-----------cceeEEEecCCCcceeeEEec-C-CceEEEec
Confidence            4578999999999999999999999999999999997           346777889999999999997 4 49999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      |.|++.++|......  +...+.+|-+.|.|++|+|.  ..++++||.|.+|++||...+.   .++.+.||..+|.+++
T Consensus       512 s~D~tArLWs~d~~~--PlRifaghlsDV~cv~FHPN--s~Y~aTGSsD~tVRlWDv~~G~---~VRiF~GH~~~V~al~  584 (707)
T KOG0263|consen  512 SHDQTARLWSTDHNK--PLRIFAGHLSDVDCVSFHPN--SNYVATGSSDRTVRLWDVSTGN---SVRIFTGHKGPVTALA  584 (707)
T ss_pred             CCCceeeeeecccCC--chhhhcccccccceEEECCc--ccccccCCCCceEEEEEcCCCc---EEEEecCCCCceEEEE
Confidence            999999999876544  34456789999999999998  6799999999999999987665   3455569999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |||+                 |.+||+|++|+.|+|||+.++..  ...+.+|++.|++|+||.+    |..||++|.|.
T Consensus       585 ~Sp~-----------------Gr~LaSg~ed~~I~iWDl~~~~~--v~~l~~Ht~ti~SlsFS~d----g~vLasgg~Dn  641 (707)
T KOG0263|consen  585 FSPC-----------------GRYLASGDEDGLIKIWDLANGSL--VKQLKGHTGTIYSLSFSRD----GNVLASGGADN  641 (707)
T ss_pred             EcCC-----------------CceEeecccCCcEEEEEcCCCcc--hhhhhcccCceeEEEEecC----CCEEEecCCCC
Confidence            9997                 68999999999999999998764  4568899999999999996    88999999999


Q ss_pred             eEEEEEcCCCcce----------------------eeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         247 KVIIWTSNDYVTW----------------------TPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       247 ~i~vw~~~~~~~~----------------------~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      +|++||+......                      ......+-..+|..|.|..-.-.|+.|
T Consensus       642 sV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g  703 (707)
T KOG0263|consen  642 SVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG  703 (707)
T ss_pred             eEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence            9999998764321                      011222334678888887655444433

>KOG0284|consensus

Probab=100.00  E-value=1.1e-37  Score=266.67  Aligned_cols=254  Identities=19%  Similarity=0.346  Sum_probs=213.7

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~l   83 (318)
                      |..+...|...|+++.++++|.+++||..||.|++|+.+            .+.+..+.+|. ..|.+++|++ . ...|
T Consensus       130 FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn------------mnnVk~~~ahh~eaIRdlafSp-n-DskF  195 (464)
T KOG0284|consen  130 FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN------------MNNVKIIQAHHAEAIRDLAFSP-N-DSKF  195 (464)
T ss_pred             HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc------------hhhhHHhhHhhhhhhheeccCC-C-Ccee
Confidence            345677999999999999999999999999999999875            23455566555 8999999985 3 5779


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      +|+|.|++|+|||.....  ....+.+|.-.|.+++|+|.  .-++++|+.|..|++||.+.+.   .+..+..|...|.
T Consensus       196 ~t~SdDg~ikiWdf~~~k--ee~vL~GHgwdVksvdWHP~--kgLiasgskDnlVKlWDprSg~---cl~tlh~HKntVl  268 (464)
T KOG0284|consen  196 LTCSDDGTIKIWDFRMPK--EERVLRGHGWDVKSVDWHPT--KGLIASGSKDNLVKLWDPRSGS---CLATLHGHKNTVL  268 (464)
T ss_pred             EEecCCCeEEEEeccCCc--hhheeccCCCCcceeccCCc--cceeEEccCCceeEeecCCCcc---hhhhhhhccceEE
Confidence            999999999999987554  33346899999999999998  4589999999999999986654   3455668999999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      .+.|.|+                 +.+|+++|.|..++++|.+..+  +.+.+.+|...|+++.|+|-   ...+|++|+
T Consensus       269 ~~~f~~n-----------------~N~Llt~skD~~~kv~DiR~mk--El~~~r~Hkkdv~~~~WhP~---~~~lftsgg  326 (464)
T KOG0284|consen  269 AVKFNPN-----------------GNWLLTGSKDQSCKVFDIRTMK--ELFTYRGHKKDVTSLTWHPL---NESLFTSGG  326 (464)
T ss_pred             EEEEcCC-----------------CCeeEEccCCceEEEEehhHhH--HHHHhhcchhhheeeccccc---cccceeecc
Confidence            9999997                 4799999999999999988543  46778999999999999996   577999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .|+.|..|.+.... ..+...+.|+..||+++|+|=|..|++|+-|+++|+|..+..+.
T Consensus       327 ~Dgsvvh~~v~~~~-p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d  384 (464)
T KOG0284|consen  327 SDGSVVHWVVGLEE-PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD  384 (464)
T ss_pred             CCCceEEEeccccc-cccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence            99999999886322 12334568899999999999999999999999999998766543

>KOG0295|consensus

Probab=100.00  E-value=2.8e-36  Score=254.71  Aligned_cols=261  Identities=26%  Similarity=0.422  Sum_probs=220.7

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.+.||++.|.++.|+..|++|++||.|-.+++||.+.          ...+++++.+|.-.|.++.|-+  .|++++|+
T Consensus       144 ~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~----------~~~c~ks~~gh~h~vS~V~f~P--~gd~ilS~  211 (406)
T KOG0295|consen  144 RSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT----------FFRCIKSLIGHEHGVSSVFFLP--LGDHILSC  211 (406)
T ss_pred             hhhhccccceeEEEEecCccEEEecCCccchhheeHHH----------HHHHHHHhcCcccceeeEEEEe--cCCeeeec
Confidence            45579999999999999999999999999999999872          2456788899999999999964  38999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|.+|+.|++.++-  +++++.+|..-|..++.+.|  +.++|+++.|.++++|-+....   ....++.|+.++.+++
T Consensus       212 srD~tik~We~~tg~--cv~t~~~h~ewvr~v~v~~D--Gti~As~s~dqtl~vW~~~t~~---~k~~lR~hEh~vEci~  284 (406)
T KOG0295|consen  212 SRDNTIKAWECDTGY--CVKTFPGHSEWVRMVRVNQD--GTIIASCSNDQTLRVWVVATKQ---CKAELREHEHPVECIA  284 (406)
T ss_pred             ccccceeEEecccce--eEEeccCchHhEEEEEecCC--eeEEEecCCCceEEEEEeccch---hhhhhhccccceEEEE
Confidence            999999999999885  66678899999999999988  8999999999999999875442   1245678999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |-|....-.... +. ...+.++++.++|.|++||+||+.++.+  ..++.+|..+|++++|+|.    |+||+|+.+|+
T Consensus       285 wap~~~~~~i~~-at-~~~~~~~~l~s~SrDktIk~wdv~tg~c--L~tL~ghdnwVr~~af~p~----Gkyi~ScaDDk  356 (406)
T KOG0295|consen  285 WAPESSYPSISE-AT-GSTNGGQVLGSGSRDKTIKIWDVSTGMC--LFTLVGHDNWVRGVAFSPG----GKYILSCADDK  356 (406)
T ss_pred             ecccccCcchhh-cc-CCCCCccEEEeecccceEEEEeccCCeE--EEEEecccceeeeeEEcCC----CeEEEEEecCC
Confidence            998643211111 11 1112257999999999999999999854  6788999999999999995    99999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ++++||++...+  ...++.|+..|.+++|..+..+++||+-|.++++|.
T Consensus       357 tlrvwdl~~~~c--mk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  357 TLRVWDLKNLQC--MKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             cEEEEEecccee--eeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence            999999988654  344668889999999999999999999999999995

>KOG0285|consensus

Probab=100.00  E-value=4.3e-36  Score=253.16  Aligned_cols=253  Identities=23%  Similarity=0.355  Sum_probs=217.7

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      |.++..||-+.|.++++.|...+++|||.|++++|||++           ++++..++.||...|..++++..  ..+|+
T Consensus       143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDla-----------tg~LkltltGhi~~vr~vavS~r--HpYlF  209 (460)
T KOG0285|consen  143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLA-----------TGQLKLTLTGHIETVRGVAVSKR--HPYLF  209 (460)
T ss_pred             ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcc-----------cCeEEEeecchhheeeeeeeccc--CceEE
Confidence            567788999999999999999999999999999999997           56888999999999999999743  67999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      |++.|+.|+.||++..+.  +..+.+|-+.|+|++.+|.  -.++++|+.|.++++||.+...   .+..+.+|..+|.+
T Consensus       210 s~gedk~VKCwDLe~nkv--IR~YhGHlS~V~~L~lhPT--ldvl~t~grDst~RvWDiRtr~---~V~~l~GH~~~V~~  282 (460)
T KOG0285|consen  210 SAGEDKQVKCWDLEYNKV--IRHYHGHLSGVYCLDLHPT--LDVLVTGGRDSTIRVWDIRTRA---SVHVLSGHTNPVAS  282 (460)
T ss_pred             EecCCCeeEEEechhhhh--HHHhccccceeEEEecccc--ceeEEecCCcceEEEeeecccc---eEEEecCCCCccee
Confidence            999999999999987764  3356789999999999998  5789999999999999997665   45677899999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +.+.|..                 -++++||.|++||+||+..++  ...++..|+-.|++++.+|.    ...+||+|.
T Consensus       283 V~~~~~d-----------------pqvit~S~D~tvrlWDl~agk--t~~tlt~hkksvral~lhP~----e~~fASas~  339 (460)
T KOG0285|consen  283 VMCQPTD-----------------PQVITGSHDSTVRLWDLRAGK--TMITLTHHKKSVRALCLHPK----ENLFASASP  339 (460)
T ss_pred             EEeecCC-----------------CceEEecCCceEEEeeeccCc--eeEeeecccceeeEEecCCc----hhhhhccCC
Confidence            9988753                 369999999999999998875  35667889999999999996    678999998


Q ss_pred             CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      |. |+-|++......  ..+.+|.+.|++++..-|| .+++|++.|++.+||-..+-.++
T Consensus       340 dn-ik~w~~p~g~f~--~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ  395 (460)
T KOG0285|consen  340 DN-IKQWKLPEGEFL--QNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQ  395 (460)
T ss_pred             cc-ceeccCCccchh--hccccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccc
Confidence            87 899998765432  2367888999999999888 56689999999999977765444

>KOG0645|consensus

Probab=100.00  E-value=6.7e-35  Score=237.86  Aligned_cols=251  Identities=27%  Similarity=0.432  Sum_probs=205.4

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      -..++.||+..|++++|+|.|+||+++|.|.++.||.-.+.         ..+++.+++||..+|.+++|+.  +|++||
T Consensus        53 k~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~---------efecv~~lEGHEnEVK~Vaws~--sG~~LA  121 (312)
T KOG0645|consen   53 KTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDG---------EFECVATLEGHENEVKCVAWSA--SGNYLA  121 (312)
T ss_pred             EEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCC---------ceeEEeeeeccccceeEEEEcC--CCCEEE
Confidence            34477899999999999999999999999999999976532         4578999999999999999984  599999


Q ss_pred             EEECCCeEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeeccccccc
Q psy2762          85 SCSYDRKVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGC  162 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v  162 (318)
                      +++.|+.|=||.+..+ ++.+...++.|..-|..|.|+|.  ..+|++++.|.+|++|+... ...|. .+.+.+|...|
T Consensus       122 TCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt--~dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TV  198 (312)
T KOG0645|consen  122 TCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT--EDLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTV  198 (312)
T ss_pred             EeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC--cceeEEeccCCeEEEEeecC-CCCeeEEEEecCccceE
Confidence            9999999999987643 45566678899999999999998  56899999999999998754 33454 45667899999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      .+++|+|.                 +..|++++.|++|+||.....     . -.-|...++.|.|..      ..|+|+
T Consensus       199 W~~~F~~~-----------------G~rl~s~sdD~tv~Iw~~~~~-----~-~~~~sr~~Y~v~W~~------~~IaS~  249 (312)
T KOG0645|consen  199 WSLAFDNI-----------------GSRLVSCSDDGTVSIWRLYTD-----L-SGMHSRALYDVPWDN------GVIASG  249 (312)
T ss_pred             EEEEecCC-----------------CceEEEecCCcceEeeeeccC-----c-chhcccceEeeeecc------cceEec
Confidence            99999986                 568999999999999975422     0 123777899999972      369999


Q ss_pred             eCCCeEEEEEcCCCcc---ee--eEEeeecCCcEEEEEEcCC-CCEEEEEeCCCeEEEEEEC
Q psy2762         243 SQDRKVIIWTSNDYVT---WT--PFIMNTFDDVVWNVSWSLT-GDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~---~~--~~~~~~~~~~v~~v~~spd-g~~l~s~~~D~~v~iW~~~  298 (318)
                      +.|+.|+|+.-.....   +.  ......|...|++|.|.|. .+.|++++.||+|++|.+.
T Consensus       250 ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  250 GGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             cCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            9999999997554211   10  0122357788999999995 6889999999999999853

>KOG0277|consensus

Probab=100.00  E-value=3.6e-36  Score=243.27  Aligned_cols=246  Identities=24%  Similarity=0.392  Sum_probs=205.8

Q ss_pred             cceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      .+.+..++++++ .+.+++|+.||+++|||+..          +.+++..++.|..+|+++.|+ +...+.++++|+|++
T Consensus        60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~----------~s~Pi~~~kEH~~EV~Svdwn-~~~r~~~ltsSWD~T  128 (311)
T KOG0277|consen   60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTM----------PSKPIHKFKEHKREVYSVDWN-TVRRRIFLTSSWDGT  128 (311)
T ss_pred             ccceeEeeecCCCcceEEEEecCceEEEeccCC----------CCcchhHHHhhhhheEEeccc-cccceeEEeeccCCc
Confidence            567888999875 57888899999999999752          345789999999999999996 457888999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      ||+|+....+  .+.++.+|...|+..+|+|.. ..+++++|.|+++++||++...   +...+..|...+.++.|+...
T Consensus       129 iKLW~~~r~~--Sv~Tf~gh~~~Iy~a~~sp~~-~nlfas~Sgd~~l~lwdvr~~g---k~~~i~ah~~Eil~cdw~ky~  202 (311)
T KOG0277|consen  129 IKLWDPNRPN--SVQTFNGHNSCIYQAAFSPHI-PNLFASASGDGTLRLWDVRSPG---KFMSIEAHNSEILCCDWSKYN  202 (311)
T ss_pred             eEeecCCCCc--ceEeecCCccEEEEEecCCCC-CCeEEEccCCceEEEEEecCCC---ceeEEEeccceeEeecccccC
Confidence            9999977655  444578999999999999986 5689999999999999986553   233467898889999998753


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      .+.++||+.|+.||+||++.-+ .+..++.+|...|+.|+|||.   ....|||+|.|-++|||
T Consensus       203 ----------------~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph---~~~lLaSasYDmT~riw  262 (311)
T KOG0277|consen  203 ----------------HNVLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPH---HASLLASASYDMTVRIW  262 (311)
T ss_pred             ----------------CcEEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcc---hhhHhhhccccceEEec
Confidence                            3679999999999999987644 457788999999999999997   57799999999999999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~  296 (318)
                      +....... .+....|++.|..++||+ ++.++|+++.|..+.||+
T Consensus       263 ~~~~~ds~-~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~  307 (311)
T KOG0277|consen  263 DPERQDSA-IETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN  307 (311)
T ss_pred             ccccchhh-hhhhhccceEEeccccccccCceeeecccccceeeec
Confidence            98754321 223346788999999998 678999999999999997

>KOG0295|consensus

Probab=100.00  E-value=4.1e-36  Score=253.73  Aligned_cols=253  Identities=22%  Similarity=0.370  Sum_probs=216.5

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.||...|+.+-|.|+-.++++++.|.+|++||..           ++.+...++||++.|..++|..  .|++||+++
T Consensus       103 ~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~-----------tg~~e~~LrGHt~sv~di~~~a--~Gk~l~tcS  169 (406)
T KOG0295|consen  103 KLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTE-----------TGELERSLRGHTDSVFDISFDA--SGKYLATCS  169 (406)
T ss_pred             hhhccccceeeeeeccCceEEEEecCCceEEEEEcc-----------chhhhhhhhccccceeEEEEec--CccEEEecC
Confidence            346899999999999999999999999999999987           4677899999999999999974  599999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|=.+++||.++- ..++..+.+|...|.++.|-|.  +.++++++.|.+|+.|++..+   +.+..+.+|..-|..+..
T Consensus       170 sDl~~~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~--gd~ilS~srD~tik~We~~tg---~cv~t~~~h~ewvr~v~v  243 (406)
T KOG0295|consen  170 SDLSAKLWDFDTF-FRCIKSLIGHEHGVSSVFFLPL--GDHILSCSRDNTIKAWECDTG---YCVKTFPGHSEWVRMVRV  243 (406)
T ss_pred             CccchhheeHHHH-HHHHHHhcCcccceeeEEEEec--CCeeeecccccceeEEecccc---eeEEeccCchHhEEEEEe
Confidence            9999999998752 2233446689999999999998  678999999999999998554   456677788876666665


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC-----------Cc
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-----------SK  236 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-----------~~  236 (318)
                      +-+                 +..+|+++.|.+|++|-+.++++  ...+..|.-+|.+++|.|....           .+
T Consensus       244 ~~D-----------------Gti~As~s~dqtl~vW~~~t~~~--k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~  304 (406)
T KOG0295|consen  244 NQD-----------------GTIIASCSNDQTLRVWVVATKQC--KAELREHEHPVECIAWAPESSYPSISEATGSTNGG  304 (406)
T ss_pred             cCC-----------------eeEEEecCCCceEEEEEeccchh--hhhhhccccceEEEEecccccCcchhhccCCCCCc
Confidence            544                 57899999999999999887754  4567899999999999995321           34


Q ss_pred             cEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         237 CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       237 ~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .+++++|.|++||+||+....+  ...+.+|+.+|..++|+|.|++|+|..+|+++|+||++..
T Consensus       305 ~~l~s~SrDktIk~wdv~tg~c--L~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~  366 (406)
T KOG0295|consen  305 QVLGSGSRDKTIKIWDVSTGMC--LFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL  366 (406)
T ss_pred             cEEEeecccceEEEEeccCCeE--EEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc
Confidence            6999999999999999998764  4667899999999999999999999999999999998775

>KOG0319|consensus

Probab=100.00  E-value=8.9e-36  Score=271.07  Aligned_cols=252  Identities=24%  Similarity=0.348  Sum_probs=213.8

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..||++.|.+++...+|.+|+|||.|+++++|.++..      . ..-.++....+|+..|.+++++. ....+|+|+|
T Consensus       360 ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~------~-~~~~~~a~~~gH~~svgava~~~-~~asffvsvS  431 (775)
T KOG0319|consen  360 IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNN------C-SKSLCVAQANGHTNSVGAVAGSK-LGASFFVSVS  431 (775)
T ss_pred             EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCC------c-chhhhhhhhcccccccceeeecc-cCccEEEEec
Confidence            67899999999998788899999999999999988422      1 12234667789999999999964 3468999999


Q ss_pred             CCCeEEEEeCCCCc-------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc
Q psy2762          88 YDRKVIIWRGDNGN-------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      .|+++++|++...+       ..+.+....|...|+||+.+|.  ..++|+||.|++.+||++...   .....+.+|+.
T Consensus       432 ~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n--dkLiAT~SqDktaKiW~le~~---~l~~vLsGH~R  506 (775)
T KOG0319|consen  432 QDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN--DKLIATGSQDKTAKIWDLEQL---RLLGVLSGHTR  506 (775)
T ss_pred             CCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC--CceEEecccccceeeecccCc---eEEEEeeCCcc
Confidence            99999999986521       1122244569999999999998  679999999999999998522   23456779999


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ++.++.|+|.                 .+.+||+|.|++||||.+++..+  +.+|+||...|..+.|-.+    +.+|+
T Consensus       507 Gvw~V~Fs~~-----------------dq~laT~SgD~TvKIW~is~fSC--lkT~eGH~~aVlra~F~~~----~~qli  563 (775)
T KOG0319|consen  507 GVWCVSFSKN-----------------DQLLATCSGDKTVKIWSISTFSC--LKTFEGHTSAVLRASFIRN----GKQLI  563 (775)
T ss_pred             ceEEEEeccc-----------------cceeEeccCCceEEEEEecccee--eeeecCccceeEeeeeeeC----CcEEE
Confidence            9999999996                 47899999999999999988765  6788999999999999885    89999


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |++.||-|+||+.++..+  ...+..|.+.||+++-+|.+.++++|+.||.+-+|.-
T Consensus       564 S~~adGliKlWnikt~eC--~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD  618 (775)
T KOG0319|consen  564 SAGADGLIKLWNIKTNEC--EMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKD  618 (775)
T ss_pred             eccCCCcEEEEeccchhh--hhhhhhccceeEEEeecCccceeEecCCCeEEEEeec
Confidence            999999999999988664  3456789999999999999999999999999999973

>KOG0643|consensus

Probab=100.00  E-value=1.4e-33  Score=229.81  Aligned_cols=253  Identities=18%  Similarity=0.270  Sum_probs=203.9

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ++..||+.+++.++++.+|.+|+||+.|.++.||-..           +|..+.++.||++.||++..+  .+.++|++|
T Consensus         4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~-----------nGerlGty~GHtGavW~~Did--~~s~~liTG   70 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSL-----------NGERLGTYDGHTGAVWCCDID--WDSKHLITG   70 (327)
T ss_pred             cccccCccccceEEecCCCcEEEEecCCCCceEEEec-----------CCceeeeecCCCceEEEEEec--CCcceeeec
Confidence            4567999999999999999999999999999999764           478899999999999999875  458999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-----CeEEEEEeecCC----CCcceeeecc
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-----GTISFLTYMSDT----NSWESRKIAA  157 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-----~~i~i~~~~~~~----~~~~~~~~~~  157 (318)
                      +.|.+++|||..+++.+..++   .+.+|..+.|+++  +.+++..+.+     +.|.+++++...    ......++..
T Consensus        71 SAD~t~kLWDv~tGk~la~~k---~~~~Vk~~~F~~~--gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t  145 (327)
T KOG0643|consen   71 SADQTAKLWDVETGKQLATWK---TNSPVKRVDFSFG--GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPT  145 (327)
T ss_pred             cccceeEEEEcCCCcEEEEee---cCCeeEEEeeccC--CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecC
Confidence            999999999999998655544   4688999999998  5555554433     467788876433    1222455666


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      +...+....|+|-                 +++|++|.+||.|++||.+++.. .....+.|...|+++.++|+    .+
T Consensus       146 ~~skit~a~Wg~l-----------------~~~ii~Ghe~G~is~~da~~g~~-~v~s~~~h~~~Ind~q~s~d----~T  203 (327)
T KOG0643|consen  146 PDSKITSALWGPL-----------------GETIIAGHEDGSISIYDARTGKE-LVDSDEEHSSKINDLQFSRD----RT  203 (327)
T ss_pred             Cccceeeeeeccc-----------------CCEEEEecCCCcEEEEEcccCce-eeechhhhccccccccccCC----cc
Confidence            7778888899985                 57899999999999999998743 23344679899999999996    89


Q ss_pred             EEEEEeCCCeEEEEEcCCCcce-----------------------------------------------------eeEEe
Q psy2762         238 MIASCSQDRKVIIWTSNDYVTW-----------------------------------------------------TPFIM  264 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~~~~-----------------------------------------------------~~~~~  264 (318)
                      +++++|.|.+.++||..+....                                                     .....
T Consensus       204 ~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrv  283 (327)
T KOG0643|consen  204 YFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRV  283 (327)
T ss_pred             eEEecccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccc
Confidence            9999999999999997663100                                                     01123


Q ss_pred             eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       265 ~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .+|-++|++|+|+|||+..+||++||.|||...+.
T Consensus       284 kGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  284 KGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             cccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence            34558999999999999999999999999986544

>KOG0265|consensus

Probab=100.00  E-value=6.9e-34  Score=234.94  Aligned_cols=252  Identities=25%  Similarity=0.396  Sum_probs=202.3

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      +-+...||++.|+.+.|+|+|.+|||||.|..|-+|++...          -+...++++|+++|..+.|..  ++..++
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gd----------ceN~~~lkgHsgAVM~l~~~~--d~s~i~  106 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGD----------CENFWVLKGHSGAVMELHGMR--DGSHIL  106 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccc----------ccceeeeccccceeEeeeecc--CCCEEE
Confidence            44567899999999999999999999999999999997521          123567789999999999974  699999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCC-cEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG-LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      |+|.|++|+.||+++++  +++++++|...|+.+.  |...+ .++.+++.|+++++||.+....    .+.......+.
T Consensus       107 S~gtDk~v~~wD~~tG~--~~rk~k~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~----~~t~~~kyqlt  178 (338)
T KOG0265|consen  107 SCGTDKTVRGWDAETGK--RIRKHKGHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEA----IKTFENKYQLT  178 (338)
T ss_pred             EecCCceEEEEecccce--eeehhccccceeeecC--ccccCCeEEEecCCCceEEEEeecccch----hhccccceeEE
Confidence            99999999999999987  5667788999999887  54434 5788899999999999864321    11112233466


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      ++.|.-.                 +..+.+|+-|+.|++||++.++.  ...+.||.++|+.++.+|.    |.++.+-+
T Consensus       179 Av~f~d~-----------------s~qv~sggIdn~ikvWd~r~~d~--~~~lsGh~DtIt~lsls~~----gs~llsns  235 (338)
T KOG0265|consen  179 AVGFKDT-----------------SDQVISGGIDNDIKVWDLRKNDG--LYTLSGHADTITGLSLSRY----GSFLLSNS  235 (338)
T ss_pred             EEEeccc-----------------ccceeeccccCceeeeccccCcc--eEEeecccCceeeEEeccC----CCcccccc
Confidence            7777643                 45789999999999999987653  5678999999999999996    88899999


Q ss_pred             CCCeEEEEEcCCCccee--eEEeeec----CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         244 QDRKVIIWTSNDYVTWT--PFIMNTF----DDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~--~~~~~~~----~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|.++++||.......+  .....++    +.-...++|||+++.+.+++.|+-|.+||...
T Consensus       236 Md~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~  297 (338)
T KOG0265|consen  236 MDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTS  297 (338)
T ss_pred             ccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccc
Confidence            99999999998765322  1222232    34577899999999999999999999999554

>KOG0313|consensus

Probab=100.00  E-value=8.4e-34  Score=240.90  Aligned_cols=267  Identities=24%  Similarity=0.437  Sum_probs=207.0

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC-CCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ-FGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~~~~las~s~D   89 (318)
                      -|.+.|.++...  +++|+||++||++||||..            |+.+.++.||.++|.+++|..+. ....|+++|.|
T Consensus       103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~------------Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~D  168 (423)
T KOG0313|consen  103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK------------GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMD  168 (423)
T ss_pred             cchhhhhhhccc--CceEEEeecCCeeEEEecC------------CceEEEEecCCcceeeeEEEecCCccceEEEecCC
Confidence            489999999887  8899999999999999985            67889999999999999885431 12369999999


Q ss_pred             CeEEEEeCCCCcEEE--EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC-------------------
Q psy2762          90 RKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN-------------------  148 (318)
Q Consensus        90 g~v~vWd~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~-------------------  148 (318)
                      .++++|.++.++.+.  +..-.||...|.+|+..++  +..+++|+.|.+|.||+......                   
T Consensus       169 qtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~s--gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~  246 (423)
T KOG0313|consen  169 QTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSS--GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKE  246 (423)
T ss_pred             ceEEEEEecCchhhhhHHhHhcccccceeEEEecCC--CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhc
Confidence            999999887664322  2222389999999999998  78999999999999998321110                   


Q ss_pred             ---CcceeeecccccccceeeeCCCCCCC--------ccccccC---------C------CCCCccceEEEecCCCeEEE
Q psy2762         149 ---SWESRKIAAHTIGCNAVSWGPGIGSL--------SELDLKG---------S------KLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       149 ---~~~~~~~~~h~~~v~~~~~~p~~~~~--------~~~~~~~---------~------~~~~~~~~lasgs~d~~i~i  202 (318)
                         ...+..+.+|+.+|.++.|++...-.        ...|+..         +      ......+.||+|+.|..||+
T Consensus       247 ~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl  326 (423)
T KOG0313|consen  247 GGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRL  326 (423)
T ss_pred             ccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceee
Confidence               00122356899999999998842110        1111110         0      00112357999999999999


Q ss_pred             EEccCCe-EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762         203 WKQEGDK-WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       203 wd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      ||.+++. -+..++|.+|+.+|.+|.|+|.   +..+|+|+|.|+++++||++... .+...+.+|.+.|.++.|. ++.
T Consensus       327 ~DPR~~~gs~v~~s~~gH~nwVssvkwsp~---~~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~-~~~  401 (423)
T KOG0313|consen  327 WDPRTGDGSVVSQSLIGHKNWVSSVKWSPT---NEFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWN-EGG  401 (423)
T ss_pred             cCCCCCCCceeEEeeecchhhhhheecCCC---CceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEecc-CCc
Confidence            9987652 2456788999999999999997   67899999999999999998743 1356678899999999999 777


Q ss_pred             EEEEEeCCCeEEEEEEC
Q psy2762         282 ILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       282 ~l~s~~~D~~v~iW~~~  298 (318)
                      .|+|||.|.++||+...
T Consensus       402 ~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  402 LIVSGGADNKLRIFKGS  418 (423)
T ss_pred             eEEeccCcceEEEeccc
Confidence            99999999999999743

>KOG0266|consensus

Probab=100.00  E-value=4.5e-33  Score=258.62  Aligned_cols=254  Identities=25%  Similarity=0.403  Sum_probs=207.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .|...|.++.|+++|++|++++.|+.+++|+....         ......++.+|...|..++|++  ++.++++++.|+
T Consensus       157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~---------~~~~~~~l~~h~~~v~~~~fs~--d~~~l~s~s~D~  225 (456)
T KOG0266|consen  157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGI---------KSNLLRELSGHTRGVSDVAFSP--DGSYLLSGSDDK  225 (456)
T ss_pred             cccCceEEEEEcCCCCeEEEccCCCcEEEeecccc---------cchhhccccccccceeeeEECC--CCcEEEEecCCc
Confidence            34889999999999999999999999999998522         0025677789999999999974  589999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +++|||+.... .....+.+|...|++++|+|+  +.++++|+.|++|+|||.....   ....+.+|..+|+.++|+++
T Consensus       226 tiriwd~~~~~-~~~~~l~gH~~~v~~~~f~p~--g~~i~Sgs~D~tvriWd~~~~~---~~~~l~~hs~~is~~~f~~d  299 (456)
T KOG0266|consen  226 TLRIWDLKDDG-RNLKTLKGHSTYVTSVAFSPD--GNLLVSGSDDGTVRIWDVRTGE---CVRKLKGHSDGISGLAFSPD  299 (456)
T ss_pred             eEEEeeccCCC-eEEEEecCCCCceEEEEecCC--CCEEEEecCCCcEEEEeccCCe---EEEeeeccCCceEEEEECCC
Confidence            99999994331 245567899999999999999  5789999999999999986532   45677899999999999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                                       +.+|++++.|+.|+|||+.++.......+.++..  +++++.|+|+    +.+|++++.|+.+
T Consensus       300 -----------------~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~----~~~ll~~~~d~~~  358 (456)
T KOG0266|consen  300 -----------------GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPN----GKYLLSASLDRTL  358 (456)
T ss_pred             -----------------CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCC----CcEEEEecCCCeE
Confidence                             5789999999999999999876321234455544  4999999996    8999999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCC---cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDD---VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~---~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      ++|++.....  .....+|..   .+.+...++.|+++.+++.|+.|.+|+...+...+
T Consensus       359 ~~w~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~  415 (456)
T KOG0266|consen  359 KLWDLRSGKS--VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQ  415 (456)
T ss_pred             EEEEccCCcc--eeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhh
Confidence            9999987542  233334433   45666778899999999999999999988754443

>KOG0266|consensus

Probab=100.00  E-value=5.2e-33  Score=258.18  Aligned_cols=252  Identities=27%  Similarity=0.413  Sum_probs=206.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||...|++++|+|+|+++++|+.|++|+|||+..          .+..++++++|...|++++|++  ++++++||+
T Consensus       198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~----------~~~~~~~l~gH~~~v~~~~f~p--~g~~i~Sgs  265 (456)
T KOG0266|consen  198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKD----------DGRNLKTLKGHSTYVTSVAFSP--DGNLLVSGS  265 (456)
T ss_pred             cccccccceeeeEECCCCcEEEEecCCceEEEeeccC----------CCeEEEEecCCCCceEEEEecC--CCCEEEEec
Confidence            3479999999999999999999999999999999942          4578899999999999999964  479999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc--cccee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI--GCNAV  165 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~--~v~~~  165 (318)
                      .|++|+|||+.++.  +...+.+|...|.+++|+++  +.++++++.|+.|++||....... ....+..+..  +++.+
T Consensus       266 ~D~tvriWd~~~~~--~~~~l~~hs~~is~~~f~~d--~~~l~s~s~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~  340 (456)
T KOG0266|consen  266 DDGTVRIWDVRTGE--CVRKLKGHSDGISGLAFSPD--GNLLVSASYDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSV  340 (456)
T ss_pred             CCCcEEEEeccCCe--EEEeeeccCCceEEEEECCC--CCEEEEcCCCccEEEEECCCCcee-eeecccCCCCCCceeEE
Confidence            99999999999876  45567899999999999999  678999999999999998554311 1223334443  58999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      .|+|+                 +.+|++++.|+++++||+.....  ...+.+|...+++ -|++.....+.++++++.|
T Consensus       341 ~fsp~-----------------~~~ll~~~~d~~~~~w~l~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~i~sg~~d  400 (456)
T KOG0266|consen  341 QFSPN-----------------GKYLLSASLDRTLKLWDLRSGKS--VGTYTGHSNLVRC-IFSPTLSTGGKLIYSGSED  400 (456)
T ss_pred             EECCC-----------------CcEEEEecCCCeEEEEEccCCcc--eeeecccCCccee-EecccccCCCCeEEEEeCC
Confidence            99997                 57999999999999999987653  3455677765433 3444434468999999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEEe--CCCeEEEEEEC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVSC--GDNSVSLWKEN  298 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~  298 (318)
                      +.|.+|+.....  ....+.+| ...|..++|+|..+++++++  .|+.+++|..+
T Consensus       401 ~~v~~~~~~s~~--~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  401 GSVYVWDSSSGG--ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             ceEEEEeCCccc--hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            999999998743  23456677 78899999999999999998  79999999743

>KOG0316|consensus

Probab=100.00  E-value=5.3e-33  Score=222.75  Aligned_cols=248  Identities=17%  Similarity=0.275  Sum_probs=197.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..+|++.|++++|+.+|+|.++||.|++||+||..           .+.+++++.+|..+|..++.+  .|+..|+||+
T Consensus        12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~-----------rg~liktYsghG~EVlD~~~s--~Dnskf~s~G   78 (307)
T KOG0316|consen   12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPL-----------RGALIKTYSGHGHEVLDAALS--SDNSKFASCG   78 (307)
T ss_pred             eecccccceEEEEEccCCCEEEEcCCCceEEeeccc-----------ccceeeeecCCCceeeecccc--ccccccccCC
Confidence            345799999999999999999999999999999986           468999999999999999876  3588999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.|.+||..+++  ...++.+|.+.|+.|.|+.+  ..++++|+.|.++++||-+..... +++.+.....+|.++..
T Consensus        79 gDk~v~vwDV~TGk--v~Rr~rgH~aqVNtV~fNee--sSVv~SgsfD~s~r~wDCRS~s~e-PiQildea~D~V~Si~v  153 (307)
T KOG0316|consen   79 GDKAVQVWDVNTGK--VDRRFRGHLAQVNTVRFNEE--SSVVASGSFDSSVRLWDCRSRSFE-PIQILDEAKDGVSSIDV  153 (307)
T ss_pred             CCceEEEEEcccCe--eeeecccccceeeEEEecCc--ceEEEeccccceeEEEEcccCCCC-ccchhhhhcCceeEEEe
Confidence            99999999999997  44567899999999999987  678999999999999998665421 22233344556666654


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      .                   .+.|++||.||++|.||++.++.  ...+  ...+|++++|+++    +.....++.|.+
T Consensus       154 ~-------------------~heIvaGS~DGtvRtydiR~G~l--~sDy--~g~pit~vs~s~d----~nc~La~~l~st  206 (307)
T KOG0316|consen  154 A-------------------EHEIVAGSVDGTVRTYDIRKGTL--SSDY--FGHPITSVSFSKD----GNCSLASSLDST  206 (307)
T ss_pred             c-------------------ccEEEeeccCCcEEEEEeeccee--ehhh--cCCcceeEEecCC----CCEEEEeeccce
Confidence            4                   25799999999999999988753  2223  3457999999997    667778899999


Q ss_pred             EEEEEcCCCcceeeEEeeecCC--cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +|+-|-+++..  .....+|..  .-..+.++.....++++++||.|.+||+....+
T Consensus       207 lrLlDk~tGkl--L~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~  261 (307)
T KOG0316|consen  207 LRLLDKETGKL--LKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQ  261 (307)
T ss_pred             eeecccchhHH--HHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecccee
Confidence            99998776532  122234443  344567777778899999999999999876543

>KOG0281|consensus

Probab=100.00  E-value=4.5e-35  Score=246.34  Aligned_cols=236  Identities=17%  Similarity=0.293  Sum_probs=199.7

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      ....|+|+.+  |...++||..|+||+|||.++           ..+++.+.||+|.|.|+.|.    ...++|||.|.+
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~-----------~~c~~~L~GHtGSVLCLqyd----~rviisGSSDsT  258 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNS-----------LECLKILTGHTGSVLCLQYD----ERVIVSGSSDST  258 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEecccc-----------HHHHHhhhcCCCcEEeeecc----ceEEEecCCCce
Confidence            4678999987  566799999999999999873           35678899999999999984    579999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |+|||.++++...  ++-+|...|..+.|+.    -++++++.|.+|.+||..........+.+.+|...|+.+.|+.  
T Consensus       259 vrvWDv~tge~l~--tlihHceaVLhlrf~n----g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--  330 (499)
T KOG0281|consen  259 VRVWDVNTGEPLN--TLIHHCEAVLHLRFSN----GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--  330 (499)
T ss_pred             EEEEeccCCchhh--HHhhhcceeEEEEEeC----CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--
Confidence            9999999987544  4557999999999995    3799999999999999865543222334569999999998874  


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                       +||+++|.|.+||+|++.+.+++  .++.+|...|-|+.+      .+++++|||.|.+||+|
T Consensus       331 -----------------kyIVsASgDRTikvW~~st~efv--Rtl~gHkRGIAClQY------r~rlvVSGSSDntIRlw  385 (499)
T KOG0281|consen  331 -----------------KYIVSASGDRTIKVWSTSTCEFV--RTLNGHKRGIACLQY------RDRLVVSGSSDNTIRLW  385 (499)
T ss_pred             -----------------ceEEEecCCceEEEEeccceeee--hhhhcccccceehhc------cCeEEEecCCCceEEEE
Confidence                             69999999999999999988765  457899988888876      47899999999999999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |.+.+.+  ..++++|++-|..+-|  |.+.++||+.||+|++||+.+.-
T Consensus       386 di~~G~c--LRvLeGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aal  431 (499)
T KOG0281|consen  386 DIECGAC--LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAAL  431 (499)
T ss_pred             eccccHH--HHHHhchHHhhhheee--cCceeeeccccceEEEEeccccc
Confidence            9988764  4578899999999999  57789999999999999988743

>KOG0264|consensus

Probab=100.00  E-value=3e-33  Score=242.47  Aligned_cols=264  Identities=23%  Similarity=0.368  Sum_probs=210.9

Q ss_pred             CCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -|.+.|+.++.-|.. .++|+.+..+.|.|||..+........+ .-.+-.+|.+|.+.-++++|++ ...-+|+|++.|
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~-~~~Pdl~L~gH~~eg~glsWn~-~~~g~Lls~~~d  199 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASG-ECRPDLRLKGHEKEGYGLSWNR-QQEGTLLSGSDD  199 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccc-cCCCceEEEeeccccccccccc-ccceeEeeccCC
Confidence            589999999987754 6777789999999999874311111110 1123357899999999999975 457789999999


Q ss_pred             CeEEEEeCCCCc-----EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          90 RKVIIWRGDNGN-----WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        90 g~v~vWd~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      ++|++||+....     ..+...+.+|...|..|+|+|.+ ..++++++.|+.+.|||.+.. .........+|..++++
T Consensus       200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h-~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~vn~  277 (422)
T KOG0264|consen  200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH-EDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAEVNC  277 (422)
T ss_pred             CcEEEEeccccccCCccccceEEeecCCcceehhhccccc-hhhheeecCCCeEEEEEcCCC-CCCCcccccccCCceeE
Confidence            999999986432     23455678999999999999975 578999999999999999763 22233455689999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      ++|+|..                +..|||||.|++|++||+++-.. +..++++|...|.+|.|||+   ....|||+|.
T Consensus       278 ~~fnp~~----------------~~ilAT~S~D~tV~LwDlRnL~~-~lh~~e~H~dev~~V~WSPh---~etvLASSg~  337 (422)
T KOG0264|consen  278 VAFNPFN----------------EFILATGSADKTVALWDLRNLNK-PLHTFEGHEDEVFQVEWSPH---NETVLASSGT  337 (422)
T ss_pred             EEeCCCC----------------CceEEeccCCCcEEEeechhccc-CceeccCCCcceEEEEeCCC---CCceeEeccc
Confidence            9999974                46799999999999999987653 67889999999999999998   5789999999


Q ss_pred             CCeEEEEEcCCCcce---------ee---EEeeecCCcEEEEEEcCCCCE-EEEEeCCCeEEEEEEC
Q psy2762         245 DRKVIIWTSNDYVTW---------TP---FIMNTFDDVVWNVSWSLTGDI-LTVSCGDNSVSLWKEN  298 (318)
Q Consensus       245 D~~i~vw~~~~~~~~---------~~---~~~~~~~~~v~~v~~spdg~~-l~s~~~D~~v~iW~~~  298 (318)
                      |+.+.|||+......         ++   +...+|...|..++|+|+..+ |+|++.|+.++||+..
T Consensus       338 D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  338 DRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             CCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            999999998775422         12   233478889999999999876 7788999999999865

>KOG0281|consensus

Probab=100.00  E-value=1.8e-34  Score=242.71  Aligned_cols=239  Identities=21%  Similarity=0.326  Sum_probs=196.7

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ++.||++.|.|+.|  +.+.|+|||.|.||+|||++           ++.++.++-+|..+|..+.|+    +.+++|+|
T Consensus       232 ~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~-----------tge~l~tlihHceaVLhlrf~----ng~mvtcS  294 (499)
T KOG0281|consen  232 ILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVN-----------TGEPLNTLIHHCEAVLHLRFS----NGYMVTCS  294 (499)
T ss_pred             hhhcCCCcEEeeec--cceEEEecCCCceEEEEecc-----------CCchhhHHhhhcceeEEEEEe----CCEEEEec
Confidence            56899999999988  56699999999999999997           567899999999999999996    57899999


Q ss_pred             CCCeEEEEeCCCCcE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          88 YDRKVIIWRGDNGNW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      .|.++.|||+..... .....+.+|...|+.|.|..    +++++++.|.+|++|+.....   -++.+.+|..++.++.
T Consensus       295 kDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~----kyIVsASgDRTikvW~~st~e---fvRtl~gHkRGIAClQ  367 (499)
T KOG0281|consen  295 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD----KYIVSASGDRTIKVWSTSTCE---FVRTLNGHKRGIACLQ  367 (499)
T ss_pred             CCceeEEEeccCchHHHHHHHHhhhhhheeeecccc----ceEEEecCCceEEEEecccee---eehhhhcccccceehh
Confidence            999999999875431 11223568999999999984    489999999999999975443   2455678999988876


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      +.                   ++.+++||.|++||+||...+.+  ...++||.+-|+||.|..      ..|+||+.||
T Consensus       368 Yr-------------------~rlvVSGSSDntIRlwdi~~G~c--LRvLeGHEeLvRciRFd~------krIVSGaYDG  420 (499)
T KOG0281|consen  368 YR-------------------DRLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRFDN------KRIVSGAYDG  420 (499)
T ss_pred             cc-------------------CeEEEecCCCceEEEEeccccHH--HHHHhchHHhhhheeecC------ceeeeccccc
Confidence            64                   46899999999999999998865  456899999999999964      5799999999


Q ss_pred             eEEEEEcCCCccee-------eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         247 KVIIWTSNDYVTWT-------PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       247 ~i~vw~~~~~~~~~-------~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +|+|||+.......       ...+..|.+.|+.+.|  |..++++.+-|.++-|||...
T Consensus       421 kikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~  478 (499)
T KOG0281|consen  421 KIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLN  478 (499)
T ss_pred             eEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCC
Confidence            99999987653210       1123457789999999  567788888899999999654

>KOG0276|consensus

Probab=100.00  E-value=8.9e-33  Score=247.49  Aligned_cols=242  Identities=26%  Similarity=0.371  Sum_probs=204.6

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      -..+|++++|-+--+++++||.|..||||+.+           ++..+.++++|.+.|.+++. ||. -.++.|+|.|-+
T Consensus        54 ~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn-----------t~ekV~~FeAH~DyIR~iav-HPt-~P~vLtsSDDm~  120 (794)
T KOG0276|consen   54 SEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN-----------TGEKVKTFEAHSDYIRSIAV-HPT-LPYVLTSSDDMT  120 (794)
T ss_pred             cccchhhheeeeccceEEEecCCceEEEEecc-----------cceeeEEeeccccceeeeee-cCC-CCeEEecCCccE
Confidence            35689999998888999999999999999997           45678999999999999996 775 567889999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |++||-+. .+.+.+++++|...|++|+|+|.+. ..+|+++-|++|++|.+.....   ...+.+|..+|+++.|-|..
T Consensus       121 iKlW~we~-~wa~~qtfeGH~HyVMqv~fnPkD~-ntFaS~sLDrTVKVWslgs~~~---nfTl~gHekGVN~Vdyy~~g  195 (794)
T KOG0276|consen  121 IKLWDWEN-EWACEQTFEGHEHYVMQVAFNPKDP-NTFASASLDRTVKVWSLGSPHP---NFTLEGHEKGVNCVDYYTGG  195 (794)
T ss_pred             EEEeeccC-ceeeeeEEcCcceEEEEEEecCCCc-cceeeeeccccEEEEEcCCCCC---ceeeeccccCcceEEeccCC
Confidence            99999885 5788889999999999999999874 5699999999999999865543   34667999999999998742


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                      .               -.||+||+.|.+|+|||.+++.|  .++++||+..|..++|+|.    -..|+|||+||++|||
T Consensus       196 d---------------kpylIsgaDD~tiKvWDyQtk~C--V~TLeGHt~Nvs~v~fhp~----lpiiisgsEDGTvriW  254 (794)
T KOG0276|consen  196 D---------------KPYLISGADDLTIKVWDYQTKSC--VQTLEGHTNNVSFVFFHPE----LPIIISGSEDGTVRIW  254 (794)
T ss_pred             C---------------cceEEecCCCceEEEeecchHHH--HHHhhcccccceEEEecCC----CcEEEEecCCccEEEe
Confidence            1               24899999999999999999876  4678999999999999997    4589999999999999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ...+.+.  ...+.---++||.++-.+.+..++.|.+.|.+.+
T Consensus       255 hs~Ty~l--E~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  255 NSKTYKL--EKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             cCcceeh--hhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence            9877541  1222222468999999999889998888776654

>KOG0292|consensus

Probab=100.00  E-value=2.8e-32  Score=252.37  Aligned_cols=255  Identities=19%  Similarity=0.309  Sum_probs=207.3

Q ss_pred             cccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc
Q psy2762           2 VSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT   81 (318)
Q Consensus         2 ~~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~   81 (318)
                      .+.|++.+ .|.++|+.++|+|.+.+++|||.|-+|+||+..           ...++.+|.||.+.|..+.| |+ .-.
T Consensus        41 ~tli~rFd-eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk-----------~rrclftL~GHlDYVRt~~F-Hh-eyP  106 (1202)
T KOG0292|consen   41 GTLIDRFD-EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK-----------TRRCLFTLLGHLDYVRTVFF-HH-EYP  106 (1202)
T ss_pred             hhHHhhhh-ccCCccceeeecCCCCeEEecCCccEEEEEecc-----------cceehhhhccccceeEEeec-cC-CCc
Confidence            34455554 599999999999999999999999999999986           34789999999999999999 54 367


Q ss_pred             EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC----Cc-------
Q psy2762          82 LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN----SW-------  150 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~----~~-------  150 (318)
                      +++|+|.|.||+||+.+++.++.  .+.||...|+|..|+|.  ..+++++|-|.+||+||+.--.+    ..       
T Consensus       107 WIlSASDDQTIrIWNwqsr~~ia--vltGHnHYVMcAqFhpt--EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~  182 (1202)
T KOG0292|consen  107 WILSASDDQTIRIWNWQSRKCIA--VLTGHNHYVMCAQFHPT--EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMR  182 (1202)
T ss_pred             eEEEccCCCeEEEEeccCCceEE--EEecCceEEEeeccCCc--cceEEEecccceEEEEeecchhccCCCCCCchhhhh
Confidence            89999999999999999987555  56799999999999998  56899999999999999741110    00       


Q ss_pred             --------------ce-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEE
Q psy2762         151 --------------ES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEET  214 (318)
Q Consensus       151 --------------~~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~  214 (318)
                                    -+ .-+.+|..+|+.++|+|..                 ..|++|+.|+.|++|++..- -| +.-
T Consensus       183 ~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTl-----------------pliVSG~DDRqVKlWrmnetKaW-EvD  244 (1202)
T KOG0292|consen  183 GQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTL-----------------PLIVSGADDRQVKLWRMNETKAW-EVD  244 (1202)
T ss_pred             ccccchhhcCCcCeeeeeeecccccccceEEecCCc-----------------ceEEecCCcceeeEEEeccccce-eeh
Confidence                          01 1234899999999999963                 47999999999999997643 34 455


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ++.||...|.++-|+|.    ..+|+|.|+|++|||||..+...  ......-.+..|-++-+|..+++|+|. |+-+-+
T Consensus       245 tcrgH~nnVssvlfhp~----q~lIlSnsEDksirVwDm~kRt~--v~tfrrendRFW~laahP~lNLfAAgH-DsGm~V  317 (1202)
T KOG0292|consen  245 TCRGHYNNVSSVLFHPH----QDLILSNSEDKSIRVWDMTKRTS--VQTFRRENDRFWILAAHPELNLFAAGH-DSGMIV  317 (1202)
T ss_pred             hhhcccCCcceEEecCc----cceeEecCCCccEEEEecccccc--eeeeeccCCeEEEEEecCCcceeeeec-CCceEE
Confidence            68899999999999995    67999999999999999987532  222223357899999999999998655 666778


Q ss_pred             EEECC
Q psy2762         295 WKENT  299 (318)
Q Consensus       295 W~~~~  299 (318)
                      +.++.
T Consensus       318 FkleR  322 (1202)
T KOG0292|consen  318 FKLER  322 (1202)
T ss_pred             EEEcc
Confidence            88764

>KOG0273|consensus

Probab=100.00  E-value=7.1e-32  Score=234.73  Aligned_cols=253  Identities=23%  Similarity=0.366  Sum_probs=210.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.-|+++|.+++++.+|+||+|++.|+++.+||..           ++....-+.-|..+--.|.|.   +..-|++++
T Consensus       271 tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~-----------~g~~~q~f~~~s~~~lDVdW~---~~~~F~ts~  336 (524)
T KOG0273|consen  271 TLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAH-----------TGTVKQQFEFHSAPALDVDWQ---SNDEFATSS  336 (524)
T ss_pred             hhhccCCceEEEEEcCCCCEEEeccCCccEEEEecc-----------CceEEEeeeeccCCccceEEe---cCceEeecC
Confidence            446799999999999999999999999999999985           356666778899887788995   357899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.|.|+.+...+  ++.++.+|.++|+++.|+|.  +.+|+++|.|++++||......   ....+.+|...+..+.|
T Consensus       337 td~~i~V~kv~~~~--P~~t~~GH~g~V~alk~n~t--g~LLaS~SdD~TlkiWs~~~~~---~~~~l~~Hskei~t~~w  409 (524)
T KOG0273|consen  337 TDGCIHVCKVGEDR--PVKTFIGHHGEVNALKWNPT--GSLLASCSDDGTLKIWSMGQSN---SVHDLQAHSKEIYTIKW  409 (524)
T ss_pred             CCceEEEEEecCCC--cceeeecccCceEEEEECCC--CceEEEecCCCeeEeeecCCCc---chhhhhhhccceeeEee
Confidence            99999999987665  44456689999999999998  8899999999999999753322   34566789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|...-      ..++  ..+..|++++.|++|++||...+.  ++++|..|..+|++|+|+|+    |+++|+|+.||.
T Consensus       410 sp~g~v------~~n~--~~~~~l~sas~dstV~lwdv~~gv--~i~~f~kH~~pVysvafS~~----g~ylAsGs~dg~  475 (524)
T KOG0273|consen  410 SPTGPV------TSNP--NMNLMLASASFDSTVKLWDVESGV--PIHTLMKHQEPVYSVAFSPN----GRYLASGSLDGC  475 (524)
T ss_pred             cCCCCc------cCCC--cCCceEEEeecCCeEEEEEccCCc--eeEeeccCCCceEEEEecCC----CcEEEecCCCCe
Confidence            996421      1111  124579999999999999998874  57889999999999999996    999999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      |.+|+.+...   ......-+..|+.|.|+.+|.+|..+-.|+.+++-|++
T Consensus       476 V~iws~~~~~---l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  476 VHIWSTKTGK---LVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             eEeccccchh---eeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            9999987653   22233445679999999999999988899999998864

>KOG0284|consensus

Probab=100.00  E-value=5.9e-34  Score=243.77  Aligned_cols=240  Identities=22%  Similarity=0.359  Sum_probs=200.5

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      +..|..+.|.|+|+.|++|++.|...+|+...           -+...-+++|..+|.++.|++  ++.+++||+.||.|
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-----------fnFEtilQaHDs~Vr~m~ws~--~g~wmiSgD~gG~i  162 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-----------FNFETILQAHDSPVRTMKWSH--NGTWMISGDKGGMI  162 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCce-----------eeHHHHhhhhcccceeEEEcc--CCCEEEEcCCCceE
Confidence            45889999999999999999999999998641           122234678999999999986  59999999999999


Q ss_pred             EEEeCCCCcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |+|+...... .  .+. .|...|.+++|+|.  ...+++++.|++|+|||+...+   +...+.+|.-.|.++.|+|.+
T Consensus       163 KyWqpnmnnV-k--~~~ahh~eaIRdlafSpn--DskF~t~SdDg~ikiWdf~~~k---ee~vL~GHgwdVksvdWHP~k  234 (464)
T KOG0284|consen  163 KYWQPNMNNV-K--IIQAHHAEAIRDLAFSPN--DSKFLTCSDDGTIKIWDFRMPK---EERVLRGHGWDVKSVDWHPTK  234 (464)
T ss_pred             Eecccchhhh-H--HhhHhhhhhhheeccCCC--CceeEEecCCCeEEEEeccCCc---hhheeccCCCCcceeccCCcc
Confidence            9998765432 1  223 35589999999997  4468999999999999986654   234668999999999999975


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                       ..||+||.|+.|++||.+++++  +.++-+|+..|..+.|+|+    +.+|+|+|.|..++++
T Consensus       235 -----------------gLiasgskDnlVKlWDprSg~c--l~tlh~HKntVl~~~f~~n----~N~Llt~skD~~~kv~  291 (464)
T KOG0284|consen  235 -----------------GLIASGSKDNLVKLWDPRSGSC--LATLHGHKNTVLAVKFNPN----GNWLLTGSKDQSCKVF  291 (464)
T ss_pred             -----------------ceeEEccCCceeEeecCCCcch--hhhhhhccceEEEEEEcCC----CCeeEEccCCceEEEE
Confidence                             3799999999999999999875  5677899999999999997    6899999999999999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEEC
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~  298 (318)
                      |+....+  .....+|...|++++|+| ...+|++|+.||.|..|.+.
T Consensus       292 DiR~mkE--l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~  337 (464)
T KOG0284|consen  292 DIRTMKE--LFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVG  337 (464)
T ss_pred             ehhHhHH--HHHhhcchhhheeeccccccccceeeccCCCceEEEecc
Confidence            9874321  233457889999999999 56788899999999999976

>KOG0276|consensus

Probab=100.00  E-value=1.6e-32  Score=245.94  Aligned_cols=253  Identities=17%  Similarity=0.262  Sum_probs=217.9

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      |++-...|++.|-++.|+|....++++-..|.|.|||.+           +...++++.--.-+|.++.|...  -+.++
T Consensus         5 ~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnye-----------tqtmVksfeV~~~PvRa~kfiaR--knWiv   71 (794)
T KOG0276|consen    5 FKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYE-----------TQTMVKSFEVSEVPVRAAKFIAR--KNWIV   71 (794)
T ss_pred             hhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecc-----------cceeeeeeeecccchhhheeeec--cceEE
Confidence            455555699999999999999999999999999999987           34678888888899999999754  58999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccccccc
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCN  163 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~  163 (318)
                      +||.|..|+|++..+.+.  +..++.|...|.||+.+|.  ..+++++|.|-+|++|+....   |. .+...+|+--|+
T Consensus        72 ~GsDD~~IrVfnynt~ek--V~~FeAH~DyIR~iavHPt--~P~vLtsSDDm~iKlW~we~~---wa~~qtfeGH~HyVM  144 (794)
T KOG0276|consen   72 TGSDDMQIRVFNYNTGEK--VKTFEAHSDYIRSIAVHPT--LPYVLTSSDDMTIKLWDWENE---WACEQTFEGHEHYVM  144 (794)
T ss_pred             EecCCceEEEEeccccee--eEEeeccccceeeeeecCC--CCeEEecCCccEEEEeeccCc---eeeeeEEcCcceEEE
Confidence            999999999999988764  4467799999999999998  568999999999999997432   43 344569999999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +++|.|..                ...||+++-|++|+||.+...  .+..++++|...|+||+|-|.+  +.-+|+||+
T Consensus       145 qv~fnPkD----------------~ntFaS~sLDrTVKVWslgs~--~~nfTl~gHekGVN~Vdyy~~g--dkpylIsga  204 (794)
T KOG0276|consen  145 QVAFNPKD----------------PNTFASASLDRTVKVWSLGSP--HPNFTLEGHEKGVNCVDYYTGG--DKPYLISGA  204 (794)
T ss_pred             EEEecCCC----------------ccceeeeeccccEEEEEcCCC--CCceeeeccccCcceEEeccCC--CcceEEecC
Confidence            99999974                357999999999999998655  4578899999999999999852  345999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +|.+|+|||.++..+  ...+.+|..-|..+.|+|.=..++||++||+||||+..+
T Consensus       205 DD~tiKvWDyQtk~C--V~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T  258 (794)
T KOG0276|consen  205 DDLTIKVWDYQTKSC--VQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT  258 (794)
T ss_pred             CCceEEEeecchHHH--HHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcc
Confidence            999999999988654  456889999999999999999999999999999999655

>KOG0286|consensus

Probab=100.00  E-value=6.5e-32  Score=222.57  Aligned_cols=218  Identities=20%  Similarity=0.319  Sum_probs=187.2

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      -++|+||.+.|+++.|++  |.++|+|+|.||.++|||..+...+..  ++....-|+.++|+|.  +.++|+|+.|+.+
T Consensus        48 rr~LkGH~~Ki~~~~ws~--Dsr~ivSaSqDGklIvWDs~TtnK~ha--ipl~s~WVMtCA~sPS--g~~VAcGGLdN~C  121 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWST--DSRRIVSASQDGKLIVWDSFTTNKVHA--IPLPSSWVMTCAYSPS--GNFVACGGLDNKC  121 (343)
T ss_pred             EEEecccccceeeeEecC--CcCeEEeeccCCeEEEEEcccccceeE--EecCceeEEEEEECCC--CCeEEecCcCcee
Confidence            478999999999999974  589999999999999999877664443  3445788999999998  7899999999999


Q ss_pred             EEEEeecCCCC---cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762         139 SFLTYMSDTNS---WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK  215 (318)
Q Consensus       139 ~i~~~~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~  215 (318)
                      .||++..+++.   ...+.+.+|+.-+.++.|-++                  .+|+|+|.|.++-+||+++++  +...
T Consensus       122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD------------------~~ilT~SGD~TCalWDie~g~--~~~~  181 (343)
T KOG0286|consen  122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD------------------NHILTGSGDMTCALWDIETGQ--QTQV  181 (343)
T ss_pred             EEEecccccccccceeeeeecCccceeEEEEEcCC------------------CceEecCCCceEEEEEcccce--EEEE
Confidence            99998755322   123456799999999999875                  479999999999999999985  4677


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      |.||...|.+|+++|.   ++..++||+.|++.+|||.+....  .+.+++|+.-|++|.|.|+|.-+++|++|++.|++
T Consensus       182 f~GH~gDV~slsl~p~---~~ntFvSg~cD~~aklWD~R~~~c--~qtF~ghesDINsv~ffP~G~afatGSDD~tcRly  256 (343)
T KOG0286|consen  182 FHGHTGDVMSLSLSPS---DGNTFVSGGCDKSAKLWDVRSGQC--VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLY  256 (343)
T ss_pred             ecCCcccEEEEecCCC---CCCeEEecccccceeeeeccCcce--eEeecccccccceEEEccCCCeeeecCCCceeEEE
Confidence            8899999999999995   478999999999999999988754  35678999999999999999999999999999999


Q ss_pred             EECCCCceEEEe
Q psy2762         296 KENTDGAWQCIT  307 (318)
Q Consensus       296 ~~~~~~~~~~~~  307 (318)
                      |++.+-+.+.+.
T Consensus       257 DlRaD~~~a~ys  268 (343)
T KOG0286|consen  257 DLRADQELAVYS  268 (343)
T ss_pred             eecCCcEEeeec
Confidence            999986666554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=3e-31  Score=262.75  Aligned_cols=256  Identities=17%  Similarity=0.276  Sum_probs=197.7

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|...|.+++|+|+|++||+||.|++|+|||.........   .....+..+.+ ...|.+++|.+ .++.+||+++.|
T Consensus       480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~---~~~~~~~~~~~-~~~v~~l~~~~-~~~~~las~~~D  554 (793)
T PLN00181        480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGR---DIHYPVVELAS-RSKLSGICWNS-YIKSQVASSNFE  554 (793)
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccccc---ccccceEEecc-cCceeeEEecc-CCCCEEEEEeCC
Confidence            35899999999999999999999999999999752110000   00112233333 46799999964 357899999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |+|+|||+.+++  ....+.+|...|.+++|+|.+ +.+|++|+.|++|++||+....   ....+.. ...+.++.|.+
T Consensus       555 g~v~lWd~~~~~--~~~~~~~H~~~V~~l~~~p~~-~~~L~Sgs~Dg~v~iWd~~~~~---~~~~~~~-~~~v~~v~~~~  627 (793)
T PLN00181        555 GVVQVWDVARSQ--LVTEMKEHEKRVWSIDYSSAD-PTLLASGSDDGSVKLWSINQGV---SIGTIKT-KANICCVQFPS  627 (793)
T ss_pred             CeEEEEECCCCe--EEEEecCCCCCEEEEEEcCCC-CCEEEEEcCCCEEEEEECCCCc---EEEEEec-CCCeEEEEEeC
Confidence            999999998765  344567899999999999743 5789999999999999985433   2223333 34677888865


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      ..                +.+|++|+.|+.|++||+..... ....+.+|...|.++.|.+     +.+|+++|.|++|+
T Consensus       628 ~~----------------g~~latgs~dg~I~iwD~~~~~~-~~~~~~~h~~~V~~v~f~~-----~~~lvs~s~D~~ik  685 (793)
T PLN00181        628 ES----------------GRSLAFGSADHKVYYYDLRNPKL-PLCTMIGHSKTVSYVRFVD-----SSTLVSSSTDNTLK  685 (793)
T ss_pred             CC----------------CCEEEEEeCCCeEEEEECCCCCc-cceEecCCCCCEEEEEEeC-----CCEEEEEECCCEEE
Confidence            32                47899999999999999876531 2455679999999999974     56899999999999


Q ss_pred             EEEcCCCc----ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         250 IWTSNDYV----TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       250 vw~~~~~~----~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      |||+....    ......+.+|...+..++|+|++++|++|+.|++|+||+...
T Consensus       686 iWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~  739 (793)
T PLN00181        686 LWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAF  739 (793)
T ss_pred             EEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCC
Confidence            99986421    112334567888999999999999999999999999999654

>KOG0318|consensus

Probab=100.00  E-value=1.8e-31  Score=234.95  Aligned_cols=279  Identities=20%  Similarity=0.339  Sum_probs=208.4

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec---ccccCeEEEEecCCCCC
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQFG   80 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~~~~~~~   80 (318)
                      .|++...-|...|++++|+|||.+++|.|.||+|.|||=.           ++..+..+.   +|++.|++++|+|  |+
T Consensus       181 KFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGk-----------tge~vg~l~~~~aHkGsIfalsWsP--Ds  247 (603)
T KOG0318|consen  181 KFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGK-----------TGEKVGELEDSDAHKGSIFALSWSP--DS  247 (603)
T ss_pred             eeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCC-----------CccEEEEecCCCCccccEEEEEECC--CC
Confidence            3677778899999999999999999999999999999854           466777887   9999999999985  58


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEE-----------------------------------------EEEEecCCCcCeEEEE
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWF-----------------------------------------KYYEYNNHDSSVNSIA  119 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~-----------------------------------------~~~~~~~h~~~v~~v~  119 (318)
                      +.|+|+|.|+++||||+.+..+.                                         ....+.+|...|++++
T Consensus       248 ~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLt  327 (603)
T KOG0318|consen  248 TQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALT  327 (603)
T ss_pred             ceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEE
Confidence            99999999999999998542211                                         1123557889999999


Q ss_pred             eeCCCCCcEEEEeecCCeEEEEEeecCCCCc--------ceeeecccc-cccceeeeC----------------------
Q psy2762         120 WAPKEFGLILACGSSDGTISFLTYMSDTNSW--------ESRKIAAHT-IGCNAVSWG----------------------  168 (318)
Q Consensus       120 ~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~--------~~~~~~~h~-~~v~~~~~~----------------------  168 (318)
                      .+|+  +.++.+|+.||.|.-|+...+....        ++..+..+. ..+..+.|.                      
T Consensus       328 v~~d--~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg  405 (603)
T KOG0318|consen  328 VSPD--GKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLG  405 (603)
T ss_pred             EcCC--CCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecC
Confidence            9998  6899999999999999876543210        111111111 112222221                      


Q ss_pred             ---------CCCCCC-----------------ccccccCC----CCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762         169 ---------PGIGSL-----------------SELDLKGS----KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       169 ---------p~~~~~-----------------~~~~~~~~----~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~  218 (318)
                               ++....                 +.+++...    .....+..+|.|++|++|+||.+...+..+...+..
T Consensus       406 ~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~  485 (603)
T KOG0318|consen  406 SQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLE  485 (603)
T ss_pred             CCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeec
Confidence                     110000                 00000000    112235689999999999999998876666677889


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      |..+|++|+|||+    +.+||++...+.+-+|++..... ....-.-|.+.|+.++|+|+.++||+|+-|..|-||.++
T Consensus       486 h~a~iT~vaySpd----~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~  560 (603)
T KOG0318|consen  486 HRAAITDVAYSPD----GAYLAAGDASRKVVLYDVASREV-KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK  560 (603)
T ss_pred             ccCCceEEEECCC----CcEEEEeccCCcEEEEEcccCce-ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence            9999999999996    89999999999999999987542 111112378999999999999999999999999999987


Q ss_pred             CCCc
Q psy2762         299 TDGA  302 (318)
Q Consensus       299 ~~~~  302 (318)
                      ...+
T Consensus       561 kP~~  564 (603)
T KOG0318|consen  561 KPAK  564 (603)
T ss_pred             Chhh
Confidence            7543

>KOG0278|consensus

Probab=100.00  E-value=1.6e-33  Score=227.54  Aligned_cols=264  Identities=20%  Similarity=0.339  Sum_probs=199.9

Q ss_pred             ccceeecCCCcceeeeeeec---CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC
Q psy2762           3 SQLNLVDTGHEDMIHDAEMD---YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF   79 (318)
Q Consensus         3 ~~~~~~~~gH~~~v~~~~~~---~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~   79 (318)
                      -|..+.-.||+.+|-.++|+   |+|-+|+|++.|+.-.+=+=           ++|.-+.++.||.+.||+...+  .+
T Consensus         4 ~~~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g-----------~tgdwigtfeghkgavw~~~l~--~n   70 (334)
T KOG0278|consen    4 RQTPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNG-----------DTGDWIGTFEGHKGAVWSATLN--KN   70 (334)
T ss_pred             ccCceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccC-----------CCCCcEEeeeccCcceeeeecC--ch
Confidence            35566668999999999997   58999999999997655432           3567899999999999999985  35


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      ..+.||++.|-+.+|||.-++.....  + .|...|.+++|+.|  ..+|++|+.++.+++++....+  .++.++.+|+
T Consensus        71 a~~aasaaadftakvw~a~tgdelhs--f-~hkhivk~~af~~d--s~~lltgg~ekllrvfdln~p~--App~E~~ght  143 (334)
T KOG0278|consen   71 ATRAASAAADFTAKVWDAVTGDELHS--F-EHKHIVKAVAFSQD--SNYLLTGGQEKLLRVFDLNRPK--APPKEISGHT  143 (334)
T ss_pred             hhhhhhhcccchhhhhhhhhhhhhhh--h-hhhheeeeEEeccc--chhhhccchHHHhhhhhccCCC--CCchhhcCCC
Confidence            78899999999999999888864333  3 48888999999998  5689999999999999875443  3466788999


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC------
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG------  233 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~------  233 (318)
                      .+|..+.|.-.                 .+.|++++.|++||+||..++..++...++   .+|+++-.++++.      
T Consensus       144 g~Ir~v~wc~e-----------------D~~iLSSadd~tVRLWD~rTgt~v~sL~~~---s~VtSlEvs~dG~ilTia~  203 (334)
T KOG0278|consen  144 GGIRTVLWCHE-----------------DKCILSSADDKTVRLWDHRTGTEVQSLEFN---SPVTSLEVSQDGRILTIAY  203 (334)
T ss_pred             CcceeEEEecc-----------------CceEEeeccCCceEEEEeccCcEEEEEecC---CCCcceeeccCCCEEEEec
Confidence            99999999875                 367889999999999999888655444433   2366666665410      


Q ss_pred             ------------------------------CCccEEEEEeCCCeEEEEEcCCCcceeeEE-eeecCCcEEEEEEcCCCCE
Q psy2762         234 ------------------------------LSKCMIASCSQDRKVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDI  282 (318)
Q Consensus       234 ------------------------------~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~-~~~~~~~v~~v~~spdg~~  282 (318)
                                                    ++...++.|++|..++.||..+...  +.. -.+|-++|.+|.|+|||..
T Consensus       204 gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeE--i~~~nkgh~gpVhcVrFSPdGE~  281 (334)
T KOG0278|consen  204 GSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEE--IGSYNKGHFGPVHCVRFSPDGEL  281 (334)
T ss_pred             CceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCce--eeecccCCCCceEEEEECCCCce
Confidence                                          0123444455555555555444331  122 2467789999999999999


Q ss_pred             EEEEeCCCeEEEEEECCC---CceEEEee
Q psy2762         283 LTVSCGDNSVSLWKENTD---GAWQCITE  308 (318)
Q Consensus       283 l~s~~~D~~v~iW~~~~~---~~~~~~~~  308 (318)
                      .|+|++||+||||+++.+   +.|.|+..
T Consensus       282 yAsGSEDGTirlWQt~~~~~~~~~~~~~~  310 (334)
T KOG0278|consen  282 YASGSEDGTIRLWQTTPGKTYGLWKCVKP  310 (334)
T ss_pred             eeccCCCceEEEEEecCCCchhhccccCh
Confidence            999999999999998763   35666543

>KOG0291|consensus

Probab=100.00  E-value=8.9e-32  Score=245.56  Aligned_cols=248  Identities=21%  Similarity=0.298  Sum_probs=198.3

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .||...+++++++|||++||+|+.||+|+|||..           .+-++.++..|+..|+.+.|..  .++.|+|+|.|
T Consensus       347 QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~-----------SgfC~vTFteHts~Vt~v~f~~--~g~~llssSLD  413 (893)
T KOG0291|consen  347 QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQ-----------SGFCFVTFTEHTSGVTAVQFTA--RGNVLLSSSLD  413 (893)
T ss_pred             cccccceeeEEECCCCcEEEeccCCCcEEEEecc-----------CceEEEEeccCCCceEEEEEEe--cCCEEEEeecC
Confidence            5899999999999999999999999999999986           3578999999999999999973  59999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-eEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-TISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |+|+.||+...+...+++.+. +-...||+..|.  +.++++|+.|. .|.+|+...+.   .+-.+.+|.+||.+++|+
T Consensus       414 GtVRAwDlkRYrNfRTft~P~-p~QfscvavD~s--GelV~AG~~d~F~IfvWS~qTGq---llDiLsGHEgPVs~l~f~  487 (893)
T KOG0291|consen  414 GTVRAWDLKRYRNFRTFTSPE-PIQFSCVAVDPS--GELVCAGAQDSFEIFVWSVQTGQ---LLDILSGHEGPVSGLSFS  487 (893)
T ss_pred             CeEEeeeecccceeeeecCCC-ceeeeEEEEcCC--CCEEEeeccceEEEEEEEeecCe---eeehhcCCCCcceeeEEc
Confidence            999999998665445444322 234568888887  78888898886 78899875543   233456999999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      |.                 +..||++|.|++||+||+-.. ..++.  + .+...|..|+|.|+    |..|+++..||.
T Consensus       488 ~~-----------------~~~LaS~SWDkTVRiW~if~s~~~vEt--l-~i~sdvl~vsfrPd----G~elaVaTldgq  543 (893)
T KOG0291|consen  488 PD-----------------GSLLASGSWDKTVRIWDIFSSSGTVET--L-EIRSDVLAVSFRPD----GKELAVATLDGQ  543 (893)
T ss_pred             cc-----------------cCeEEeccccceEEEEEeeccCceeee--E-eeccceeEEEEcCC----CCeEEEEEecce
Confidence            97                 468999999999999996543 11222  2 35566999999996    889999999999


Q ss_pred             EEEEEcCCCcce---------------ee---EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         248 VIIWTSNDYVTW---------------TP---FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       248 i~vw~~~~~~~~---------------~~---~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      |.+||.+.....               ..   .........+.++.||+||.+|++||..+.+.|+++.++
T Consensus       544 Itf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~  614 (893)
T KOG0291|consen  544 ITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEG  614 (893)
T ss_pred             EEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchh
Confidence            999998764210               00   000112257999999999999999999999999997663

>KOG0283|consensus

Probab=100.00  E-value=3.1e-32  Score=251.81  Aligned_cols=256  Identities=21%  Similarity=0.381  Sum_probs=195.5

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCC----------------------------cC-C---CCC------
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRN----------------------------LK-K---DDS------   51 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~----------------------------~~-~---~~~------   51 (318)
                      .+|++.|.++.|++||+||||||.|+.||||.+-..                            .. .   ...      
T Consensus       264 ~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  264 NAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             cccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            389999999999999999999999999999987530                            00 0   000      


Q ss_pred             CCC-----------cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe
Q psy2762          52 HSQ-----------KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW  120 (318)
Q Consensus        52 ~~~-----------~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~  120 (318)
                      +..           ..+++..+.||.+.|..+.|+   ..++|+|+|.|+|||||++....+.+++   .|...|+||+|
T Consensus       344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS---Kn~fLLSSSMDKTVRLWh~~~~~CL~~F---~HndfVTcVaF  417 (712)
T KOG0283|consen  344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS---KNNFLLSSSMDKTVRLWHPGRKECLKVF---SHNDFVTCVAF  417 (712)
T ss_pred             CCccccCCCccccccccchhhhhccchhheecccc---cCCeeEeccccccEEeecCCCcceeeEE---ecCCeeEEEEe
Confidence            000           123477899999999999997   3789999999999999999877766655   39999999999


Q ss_pred             eCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeE
Q psy2762         121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLI  200 (318)
Q Consensus       121 ~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i  200 (318)
                      +|.+ ..++++|+-|+.|+||++...    ++.....-..-|+++.|.|+                 |++.+.|+.+|.+
T Consensus       418 nPvD-DryFiSGSLD~KvRiWsI~d~----~Vv~W~Dl~~lITAvcy~Pd-----------------Gk~avIGt~~G~C  475 (712)
T KOG0283|consen  418 NPVD-DRYFISGSLDGKVRLWSISDK----KVVDWNDLRDLITAVCYSPD-----------------GKGAVIGTFNGYC  475 (712)
T ss_pred             cccC-CCcEeecccccceEEeecCcC----eeEeehhhhhhheeEEeccC-----------------CceEEEEEeccEE
Confidence            9976 578999999999999997432    12222222356899999997                 5789999999999


Q ss_pred             EEEEccCCeEEEEEEcccC------CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC--CcEE
Q psy2762         201 KIWKQEGDKWIEETKLENH------SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD--DVVW  272 (318)
Q Consensus       201 ~iwd~~~~~~~~~~~~~~h------~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~--~~v~  272 (318)
                      ++|+....++.....+.-|      ...|+.+.|.|.   +...++..+.|..|||+|..+..  ....+.++.  ..-.
T Consensus       476 ~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~---~~~~vLVTSnDSrIRI~d~~~~~--lv~KfKG~~n~~SQ~  550 (712)
T KOG0283|consen  476 RFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPG---DPDEVLVTSNDSRIRIYDGRDKD--LVHKFKGFRNTSSQI  550 (712)
T ss_pred             EEEEccCCeEEEeeeEeeccCccccCceeeeeEecCC---CCCeEEEecCCCceEEEeccchh--hhhhhcccccCCcce
Confidence            9999887765444333222      127999999996   34467778899999999985432  111222222  2234


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         273 NVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       273 ~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ..+|+.||++|+++++|.-|.||+..
T Consensus       551 ~Asfs~Dgk~IVs~seDs~VYiW~~~  576 (712)
T KOG0283|consen  551 SASFSSDGKHIVSASEDSWVYIWKND  576 (712)
T ss_pred             eeeEccCCCEEEEeecCceEEEEeCC
Confidence            77999999999999999999999963

>KOG0292|consensus

Probab=100.00  E-value=3e-32  Score=252.20  Aligned_cols=255  Identities=20%  Similarity=0.333  Sum_probs=218.4

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .-+..|-.++|+|.-.+++++-..|.|++||..           -+.++..+..|.|+|..+.| || ...+|+|||.|-
T Consensus         7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYR-----------M~tli~rFdeHdGpVRgv~F-H~-~qplFVSGGDDy   73 (1202)
T KOG0292|consen    7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYR-----------MGTLIDRFDEHDGPVRGVDF-HP-TQPLFVSGGDDY   73 (1202)
T ss_pred             cccccccceecCCCCCEEEEeecCceeeeehhh-----------hhhHHhhhhccCCccceeee-cC-CCCeEEecCCcc
Confidence            346678899999999999999999999999974           36788899999999999999 66 478999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +|+||+..+.+  +++++.+|-..|..+.|++.  -..++++|.|.+|+||+.-+++   .+..+.+|.--|++..|+|.
T Consensus        74 kIkVWnYk~rr--clftL~GHlDYVRt~~FHhe--yPWIlSASDDQTIrIWNwqsr~---~iavltGHnHYVMcAqFhpt  146 (1202)
T KOG0292|consen   74 KIKVWNYKTRR--CLFTLLGHLDYVRTVFFHHE--YPWILSASDDQTIRIWNWQSRK---CIAVLTGHNHYVMCAQFHPT  146 (1202)
T ss_pred             EEEEEecccce--ehhhhccccceeEEeeccCC--CceEEEccCCCeEEEEeccCCc---eEEEEecCceEEEeeccCCc
Confidence            99999988765  78889999999999999997  5689999999999999975443   35566799999999999995


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccC--------C-------------------eEEEEEEcccCCCCe
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--------D-------------------KWIEETKLENHSDWV  223 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~--------~-------------------~~~~~~~~~~h~~~V  223 (318)
                                       ...++++|-|.+|||||...        +                   ..+-.+.++||...|
T Consensus       147 -----------------EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGV  209 (1202)
T KOG0292|consen  147 -----------------EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGV  209 (1202)
T ss_pred             -----------------cceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccccccc
Confidence                             25799999999999999653        1                   122345679999999


Q ss_pred             eEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      +-++|+|+    --+|+||++|+.|++|.-.....|......+|...|.+|-|+|..+.++|.|+|+++|+||++.....
T Consensus       210 NwaAfhpT----lpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v  285 (1202)
T KOG0292|consen  210 NWAAFHPT----LPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSV  285 (1202)
T ss_pred             ceEEecCC----cceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccce
Confidence            99999997    45899999999999998877666776677789999999999999999999999999999998765444


Q ss_pred             EEE
Q psy2762         304 QCI  306 (318)
Q Consensus       304 ~~~  306 (318)
                      +|.
T Consensus       286 ~tf  288 (1202)
T KOG0292|consen  286 QTF  288 (1202)
T ss_pred             eee
Confidence            433

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=7.4e-31  Score=260.02  Aligned_cols=246  Identities=18%  Similarity=0.281  Sum_probs=196.8

Q ss_pred             CcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          12 HEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        12 H~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +...|.+++|+| ++.+|++++.||+|+|||+.           .++.+..+.+|.+.|++++|++ .++.+|+||+.|+
T Consensus       531 ~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~-----------~~~~~~~~~~H~~~V~~l~~~p-~~~~~L~Sgs~Dg  598 (793)
T PLN00181        531 SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVA-----------RSQLVTEMKEHEKRVWSIDYSS-ADPTLLASGSDDG  598 (793)
T ss_pred             ccCceeeEEeccCCCCEEEEEeCCCeEEEEECC-----------CCeEEEEecCCCCCEEEEEEcC-CCCCEEEEEcCCC
Confidence            346788999986 47899999999999999986           3467888999999999999964 4688999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +|++||+.++....  .+.. ...|.++.|++.. +.++++|+.|+.|++||......  ....+.+|...|..+.|.+ 
T Consensus       599 ~v~iWd~~~~~~~~--~~~~-~~~v~~v~~~~~~-g~~latgs~dg~I~iwD~~~~~~--~~~~~~~h~~~V~~v~f~~-  671 (793)
T PLN00181        599 SVKLWSINQGVSIG--TIKT-KANICCVQFPSES-GRSLAFGSADHKVYYYDLRNPKL--PLCTMIGHSKTVSYVRFVD-  671 (793)
T ss_pred             EEEEEECCCCcEEE--EEec-CCCeEEEEEeCCC-CCEEEEEeCCCeEEEEECCCCCc--cceEecCCCCCEEEEEEeC-
Confidence            99999998776443  3333 4679999997643 67899999999999999854321  2345568999999999974 


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC----eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD----KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~----~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                                       +.+|++++.|++|+|||+...    .......+.+|...+.+++|+|+    +.+|++|+.|+
T Consensus       672 -----------------~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~----~~~lasgs~D~  730 (793)
T PLN00181        672 -----------------SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVS----DGYIATGSETN  730 (793)
T ss_pred             -----------------CCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCC----CCEEEEEeCCC
Confidence                             357999999999999998642    11235678899999999999996    77999999999


Q ss_pred             eEEEEEcCCCcceee-----------EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         247 KVIIWTSNDYVTWTP-----------FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~-----------~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +|++|+.........           .....+...|.+++|+|+++.|++|+.||+|+||++
T Consensus       731 ~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        731 EVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            999999754321000           011234467999999999999999999999999985

>KOG0293|consensus

Probab=100.00  E-value=4.6e-32  Score=232.53  Aligned_cols=268  Identities=23%  Similarity=0.355  Sum_probs=194.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +...|++.|-.+.||++|+||||+|.|.+..+|.+...        ..-++..++.+|..+|..+.|+|  |.++|++++
T Consensus       219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d--------~~~kl~~tlvgh~~~V~yi~wSP--DdryLlaCg  288 (519)
T KOG0293|consen  219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD--------VHFKLKKTLVGHSQPVSYIMWSP--DDRYLLACG  288 (519)
T ss_pred             hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecC--------cceeeeeeeecccCceEEEEECC--CCCeEEecC
Confidence            45789999999999999999999999999999998622        12356889999999999999985  478999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC-CCcceeeecccccccceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT-NSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~-~~~~~~~~~~h~~~v~~~~  166 (318)
                      .|..+++||+.++.....+. .+|...+.+++|.||  +..+++|+.|++|..|+..-+- ..|+-.    ....|.+++
T Consensus       289 ~~e~~~lwDv~tgd~~~~y~-~~~~~S~~sc~W~pD--g~~~V~Gs~dr~i~~wdlDgn~~~~W~gv----r~~~v~dla  361 (519)
T KOG0293|consen  289 FDEVLSLWDVDTGDLRHLYP-SGLGFSVSSCAWCPD--GFRFVTGSPDRTIIMWDLDGNILGNWEGV----RDPKVHDLA  361 (519)
T ss_pred             chHheeeccCCcchhhhhcc-cCcCCCcceeEEccC--CceeEecCCCCcEEEecCCcchhhccccc----ccceeEEEE
Confidence            99999999999987655443 236678999999999  7789999999999999874221 122211    123466777


Q ss_pred             eCCCCCCCcccccc-------------------CCCCCC----ccceEEE-ecCCCeEEEEEccCCeEEEEEEcccCCCC
Q psy2762         167 WGPGIGSLSELDLK-------------------GSKLGG----VAKRLVS-GGCDNLIKIWKQEGDKWIEETKLENHSDW  222 (318)
Q Consensus       167 ~~p~~~~~~~~~~~-------------------~~~~~~----~~~~las-gs~d~~i~iwd~~~~~~~~~~~~~~h~~~  222 (318)
                      ..+++..+.....+                   .+++..    ....+|. --.+..|++||++.+.  ....+.||+..
T Consensus       362 it~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~--lv~kY~Ghkq~  439 (519)
T KOG0293|consen  362 ITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK--LVRKYFGHKQG  439 (519)
T ss_pred             EcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh--HHHHhhccccc
Confidence            77764332111100                   000000    0112221 2244567788877443  34566788754


Q ss_pred             --eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC-CCEEEEEeCCCeEEEEEECC
Q psy2762         223 --VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT-GDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       223 --V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd-g~~l~s~~~D~~v~iW~~~~  299 (318)
                        +-.-||.-   .+..+++|||+|+.|+||+.....  ...++.+|...|+.|+|+|. -.++||||+||+||||....
T Consensus       440 ~fiIrSCFgg---~~~~fiaSGSED~kvyIWhr~sgk--ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  440 HFIIRSCFGG---GNDKFIASGSEDSKVYIWHRISGK--LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             ceEEEeccCC---CCcceEEecCCCceEEEEEccCCc--eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence              33335543   246799999999999999987754  46788999999999999995 46799999999999997543

>KOG0282|consensus

Probab=100.00  E-value=1.9e-32  Score=238.99  Aligned_cols=250  Identities=21%  Similarity=0.352  Sum_probs=201.1

Q ss_pred             ceeecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      +-..++||+..|+++.|-| .+.+|+|||.|+.|+||++-+          .+.+++++.+|..+|..++|+.  +|..|
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~----------~~~~lrtf~gH~k~Vrd~~~s~--~g~~f  273 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD----------DRRCLRTFKGHRKPVRDASFNN--CGTSF  273 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEec----------Ccceehhhhcchhhhhhhhccc--cCCee
Confidence            3457899999999999998 899999999999999999952          3678999999999999999973  69999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      .|+|+|+++++||.++|++...+..   ...++|+.|+|++ ..++++|+.|+.|+.||.+.++   -++....|-+.+.
T Consensus       274 LS~sfD~~lKlwDtETG~~~~~f~~---~~~~~cvkf~pd~-~n~fl~G~sd~ki~~wDiRs~k---vvqeYd~hLg~i~  346 (503)
T KOG0282|consen  274 LSASFDRFLKLWDTETGQVLSRFHL---DKVPTCVKFHPDN-QNIFLVGGSDKKIRQWDIRSGK---VVQEYDRHLGAIL  346 (503)
T ss_pred             eeeecceeeeeeccccceEEEEEec---CCCceeeecCCCC-CcEEEEecCCCcEEEEeccchH---HHHHHHhhhhhee
Confidence            9999999999999999986554432   3568899999996 4788999999999999987654   2344557888899


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-----------------------EE---------
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-----------------------WI---------  211 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-----------------------~~---------  211 (318)
                      .+.|-|+                 +.++++.+.|+++|||+.+..-                       +.         
T Consensus       347 ~i~F~~~-----------------g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i  409 (503)
T KOG0282|consen  347 DITFVDE-----------------GRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYI  409 (503)
T ss_pred             eeEEccC-----------------CceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceE
Confidence            9999886                 4678888888888888754210                       00         


Q ss_pred             ------------EEEEcccCCCC--eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc
Q psy2762         212 ------------EETKLENHSDW--VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS  277 (318)
Q Consensus       212 ------------~~~~~~~h~~~--V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s  277 (318)
                                  ....++||...  -..|.|||+    |.+|+||..||.+.+||-.+-.  ....+..|++++..+.|+
T Consensus       410 ~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD----G~~l~SGdsdG~v~~wdwkt~k--l~~~lkah~~~ci~v~wH  483 (503)
T KOG0282|consen  410 AIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD----GRTLCSGDSDGKVNFWDWKTTK--LVSKLKAHDQPCIGVDWH  483 (503)
T ss_pred             EEEecccccccCHhhhhcceeccCceeeEEEcCC----CCeEEeecCCccEEEeechhhh--hhhccccCCcceEEEEec
Confidence                        00124667543  456899996    8999999999999999976633  234566789999999999


Q ss_pred             CCC-CEEEEEeCCCeEEEEE
Q psy2762         278 LTG-DILTVSCGDNSVSLWK  296 (318)
Q Consensus       278 pdg-~~l~s~~~D~~v~iW~  296 (318)
                      |.. ..+|+++.||.|++|+
T Consensus       484 P~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  484 PVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             CCCcceeEecccCceeEecC
Confidence            974 5688999999999995

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=2.6e-30  Score=223.30  Aligned_cols=248  Identities=30%  Similarity=0.439  Sum_probs=203.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|++.|++++|+|++++|++++.||.|++|++..           +.....+..|...+..+.|.+  ++++|++++.|
T Consensus         6 ~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~-----------~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~   72 (289)
T cd00200           6 KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLET-----------GELLRTLKGHTGPVRDVAASA--DGTYLASGSSD   72 (289)
T ss_pred             cccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeC-----------CCcEEEEecCCcceeEEEECC--CCCEEEEEcCC
Confidence            48999999999999999999999999999999863           335677889999999999974  46899999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      +.|++|++..++.  ...+..|...+.++.|+|+  +.++++++.|+.|.+|++....   ....+..|...+..+.|+|
T Consensus        73 ~~i~i~~~~~~~~--~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~~~~~  145 (289)
T cd00200          73 KTIRLWDLETGEC--VRTLTGHTSYVSSVAFSPD--GRILSSSSRDKTIKVWDVETGK---CLTTLRGHTDWVNSVAFSP  145 (289)
T ss_pred             CeEEEEEcCcccc--eEEEeccCCcEEEEEEcCC--CCEEEEecCCCeEEEEECCCcE---EEEEeccCCCcEEEEEEcC
Confidence            9999999987543  3345578889999999997  5688888889999999975332   2334457888899999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +                 +.++++++.|+.|++||+..++.  ...+..|...|.++.|+|+    +..|++++.|+.|+
T Consensus       146 ~-----------------~~~l~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~----~~~l~~~~~~~~i~  202 (289)
T cd00200         146 D-----------------GTFVASSSQDGTIKLWDLRTGKC--VATLTGHTGEVNSVAFSPD----GEKLLSSSSDGTIK  202 (289)
T ss_pred             c-----------------CCEEEEEcCCCcEEEEEcccccc--ceeEecCccccceEEECCC----cCEEEEecCCCcEE
Confidence            6                 35788888899999999986643  3445688889999999996    67888899999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +|+.....  ....+..+...+.++.|+|++.++++++.|+.+++|+...+..
T Consensus       203 i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~  253 (289)
T cd00200         203 LWDLSTGK--CLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGEC  253 (289)
T ss_pred             EEECCCCc--eecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCcee
Confidence            99997633  1223336777999999999999998888899999999876543

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=5.9e-30  Score=237.68  Aligned_cols=275  Identities=14%  Similarity=0.220  Sum_probs=199.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE---EEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL---IAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      |-..|+...+++++..+++++.+.....|+..... .-....+.|+.   ...+.+|.+.|++++|++ .++++|+||+.
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~-~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP-~d~~~LaSgS~   96 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGST-AVLKHTDYGKLASNPPILLGQEGPIIDVAFNP-FDPQKLFTASE   96 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCce-EEeeccccccCCCCCceEeCCCCCEEEEEEcC-CCCCEEEEEeC
Confidence            55677777788898888889999999999865221 00000011111   124789999999999974 45789999999


Q ss_pred             CCeEEEEeCCCCcE-----EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          89 DRKVIIWRGDNGNW-----FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        89 Dg~v~vWd~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      |++|+|||+..+..     .+...+.+|...|.+|+|+|+. ..+|++++.|++|+|||+....   ....+.+|...|.
T Consensus        97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~-~~iLaSgs~DgtVrIWDl~tg~---~~~~l~~h~~~V~  172 (493)
T PTZ00421         97 DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSA-MNVLASAGADMVVNVWDVERGK---AVEVIKCHSDQIT  172 (493)
T ss_pred             CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCC-CCEEEEEeCCCEEEEEECCCCe---EEEEEcCCCCceE
Confidence            99999999875421     1344677899999999999974 3589999999999999985442   2445668999999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCC-eeEEEEccCCCCCccEEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW-VRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~~~l~s~  242 (318)
                      +++|+|+                 +.+|++++.|++|+|||+++++.  ..++.+|... +..+.|.|+    +..|+++
T Consensus       173 sla~spd-----------------G~lLatgs~Dg~IrIwD~rsg~~--v~tl~~H~~~~~~~~~w~~~----~~~ivt~  229 (493)
T PTZ00421        173 SLEWNLD-----------------GSLLCTTSKDKKLNIIDPRDGTI--VSSVEAHASAKSQRCLWAKR----KDLIITL  229 (493)
T ss_pred             EEEEECC-----------------CCEEEEecCCCEEEEEECCCCcE--EEEEecCCCCcceEEEEcCC----CCeEEEE
Confidence            9999997                 46899999999999999988764  3456788765 346789886    4455555


Q ss_pred             e----CCCeEEEEEcCCCcceeeEEee-ecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEEEeeeccccccc
Q psy2762         243 S----QDRKVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITEMGKTSEQR  316 (318)
Q Consensus       243 s----~D~~i~vw~~~~~~~~~~~~~~-~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~~~~~~~~~~~~  316 (318)
                      +    .|+.|+|||+...... ..... .....+....|+||+++|++++ .|+.||+|++..+....+ .++...+.++
T Consensus       230 G~s~s~Dr~VklWDlr~~~~p-~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~-~~~~s~~~~~  307 (493)
T PTZ00421        230 GCSKSQQRQIMLWDTRKMASP-YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFC-SSYSSVEPHK  307 (493)
T ss_pred             ecCCCCCCeEEEEeCCCCCCc-eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEE-eeccCCCCCc
Confidence            4    5899999998764321 11111 1224577788999999999888 599999999987543333 4455544455


Q ss_pred             c
Q psy2762         317 A  317 (318)
Q Consensus       317 ~  317 (318)
                      +
T Consensus       308 g  308 (493)
T PTZ00421        308 G  308 (493)
T ss_pred             c
Confidence            4

>KOG0319|consensus

Probab=100.00  E-value=4.8e-31  Score=240.35  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=208.2

Q ss_pred             CCCcceeeeeee-cCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEM-DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~-~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      -|-.+.|.+++| .|..++||.++..+.+|+|++..+            --.-+.||+..|.++...  .+|.+|+|||-
T Consensus       320 vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~------------~c~ii~GH~e~vlSL~~~--~~g~llat~sK  385 (775)
T KOG0319|consen  320 VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTS------------YCQIIPGHTEAVLSLDVW--SSGDLLATGSK  385 (775)
T ss_pred             cCCchhheeeeecCCccceEEEEeCCCceEEEecCCC------------ceEEEeCchhheeeeeec--ccCcEEEEecC
Confidence            477889999997 788899999999999999988632            123688999999999832  24789999999


Q ss_pred             CCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee------eccccc
Q psy2762          89 DRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK------IAAHTI  160 (318)
Q Consensus        89 Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~------~~~h~~  160 (318)
                      |.+|++|.++++.  ..++....+|+..|.+|+++... ...|+++|.|.++++|++...+....+..      ...|..
T Consensus       386 D~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~-asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdK  464 (775)
T KOG0319|consen  386 DKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG-ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDK  464 (775)
T ss_pred             CceEEEEEecCCcchhhhhhhhcccccccceeeecccC-ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcc
Confidence            9999999884432  23455567899999999997654 56899999999999999854221111111      237999


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .|++++.+|+                 ...|||||+|++.+||++....  ...++.||+..|.||.|+|.    ...++
T Consensus       465 dIN~Vaia~n-----------------dkLiAT~SqDktaKiW~le~~~--l~~vLsGH~RGvw~V~Fs~~----dq~la  521 (775)
T KOG0319|consen  465 DINCVAIAPN-----------------DKLIATGSQDKTAKIWDLEQLR--LLGVLSGHTRGVWCVSFSKN----DQLLA  521 (775)
T ss_pred             cccceEecCC-----------------CceEEecccccceeeecccCce--EEEEeeCCccceEEEEeccc----cceeE
Confidence            9999999997                 4789999999999999998554  46889999999999999995    78999


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      |+|.|++|+||.+.+..+  ...+.+|+..|..++|-.+|++|+|++.||-++||++++
T Consensus       522 T~SgD~TvKIW~is~fSC--lkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt  578 (775)
T KOG0319|consen  522 TCSGDKTVKIWSISTFSC--LKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT  578 (775)
T ss_pred             eccCCceEEEEEecccee--eeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc
Confidence            999999999999988654  456789999999999999999999999999999999876

>KOG0268|consensus

Probab=100.00  E-value=2.4e-32  Score=230.89  Aligned_cols=248  Identities=23%  Similarity=0.328  Sum_probs=194.2

Q ss_pred             CCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .||.+.|++++=+|.. ..++||+.||.|+|||+.           ..+++.++++|.|.|..+++..    ..++++|.
T Consensus        63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnls-----------qR~~~~~f~AH~G~V~Gi~v~~----~~~~tvgd  127 (433)
T KOG0268|consen   63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLS-----------QRECIRTFKAHEGLVRGICVTQ----TSFFTVGD  127 (433)
T ss_pred             cccccccchhhcCcchhhhhhccccCceEEEEehh-----------hhhhhheeecccCceeeEEecc----cceEEecC
Confidence            6999999999999987 789999999999999997           2467899999999999999852    67899999


Q ss_pred             CCeEEEEeCCC---------------------------CcEEEEE---------EecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762          89 DRKVIIWRGDN---------------------------GNWFKYY---------EYNNHDSSVNSIAWAPKEFGLILACG  132 (318)
Q Consensus        89 Dg~v~vWd~~~---------------------------~~~~~~~---------~~~~h~~~v~~v~~~p~~~~~~lasg  132 (318)
                      |++|+.|.+..                           |+.+.++         ++.--...|.++.|+|.+ ..+|+++
T Consensus       128 DKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvE-TsILas~  206 (433)
T KOG0268|consen  128 DKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVE-TSILASC  206 (433)
T ss_pred             CcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCc-chheeee
Confidence            99999997421                           1111222         222234568899999986 5678888


Q ss_pred             ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762         133 SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       133 s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~  212 (318)
                      ..|+.|.++|.+....   ++++ .-...-+.++|+|+                 +.-|++|++|..++.||++.-+ .+
T Consensus       207 ~sDrsIvLyD~R~~~P---l~KV-i~~mRTN~IswnPe-----------------afnF~~a~ED~nlY~~DmR~l~-~p  264 (433)
T KOG0268|consen  207 ASDRSIVLYDLRQASP---LKKV-ILTMRTNTICWNPE-----------------AFNFVAANEDHNLYTYDMRNLS-RP  264 (433)
T ss_pred             ccCCceEEEecccCCc---ccee-eeeccccceecCcc-----------------ccceeeccccccceehhhhhhc-cc
Confidence            8999999999865542   1221 12234578899995                 3568999999999999987643 24


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV  292 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v  292 (318)
                      .....+|.+.|.+|.|||.    |+.|+|||.|++||||...........- ..--+.|.+|.||.|.+++.|||+|+.|
T Consensus       265 ~~v~~dhvsAV~dVdfspt----G~EfvsgsyDksIRIf~~~~~~SRdiYh-tkRMq~V~~Vk~S~Dskyi~SGSdd~nv  339 (433)
T KOG0268|consen  265 LNVHKDHVSAVMDVDFSPT----GQEFVSGSYDKSIRIFPVNHGHSRDIYH-TKRMQHVFCVKYSMDSKYIISGSDDGNV  339 (433)
T ss_pred             chhhcccceeEEEeccCCC----cchhccccccceEEEeecCCCcchhhhh-HhhhheeeEEEEeccccEEEecCCCcce
Confidence            5677899999999999997    8889999999999999887754321110 1112569999999999999999999999


Q ss_pred             EEEEECCC
Q psy2762         293 SLWKENTD  300 (318)
Q Consensus       293 ~iW~~~~~  300 (318)
                      |+|+.+..
T Consensus       340 RlWka~As  347 (433)
T KOG0268|consen  340 RLWKAKAS  347 (433)
T ss_pred             eeeecchh
Confidence            99996654

>KOG0285|consensus

Probab=99.98  E-value=5.2e-31  Score=222.56  Aligned_cols=250  Identities=19%  Similarity=0.344  Sum_probs=210.8

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      +|++.++||...|+.++||+--.||++|+.|+.|+.||++.           .++++.+.||...|+|++. +|. -+.|
T Consensus       184 ~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~-----------nkvIR~YhGHlS~V~~L~l-hPT-ldvl  250 (460)
T KOG0285|consen  184 QLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEY-----------NKVIRHYHGHLSGVYCLDL-HPT-LDVL  250 (460)
T ss_pred             eEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechh-----------hhhHHHhccccceeEEEec-ccc-ceeE
Confidence            57888899999999999999999999999999999999973           4688999999999999997 664 6889


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      ++|+.|.++||||+++..  ++..+.+|..+|..|.+.|.+  ..+++||.|++|++||+..++   ....+..|...+.
T Consensus       251 ~t~grDst~RvWDiRtr~--~V~~l~GH~~~V~~V~~~~~d--pqvit~S~D~tvrlWDl~agk---t~~tlt~hkksvr  323 (460)
T KOG0285|consen  251 VTGGRDSTIRVWDIRTRA--SVHVLSGHTNPVASVMCQPTD--PQVITGSHDSTVRLWDLRAGK---TMITLTHHKKSVR  323 (460)
T ss_pred             EecCCcceEEEeeecccc--eEEEecCCCCcceeEEeecCC--CceEEecCCceEEEeeeccCc---eeEeeecccceee
Confidence            999999999999999865  566788999999999999874  468899999999999997665   2445667888999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +++.+|.                 ...||+++.| .|+-|++-.+++.  +.+.+|+.-|++++-+.+     .++++|+
T Consensus       324 al~lhP~-----------------e~~fASas~d-nik~w~~p~g~f~--~nlsgh~~iintl~~nsD-----~v~~~G~  378 (460)
T KOG0285|consen  324 ALCLHPK-----------------ENLFASASPD-NIKQWKLPEGEFL--QNLSGHNAIINTLSVNSD-----GVLVSGG  378 (460)
T ss_pred             EEecCCc-----------------hhhhhccCCc-cceeccCCccchh--hccccccceeeeeeeccC-----ceEEEcC
Confidence            9999996                 2468998887 5899998877653  458899999999998874     4889999


Q ss_pred             CCCeEEEEEcCCCcceee-------EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         244 QDRKVIIWTSNDYVTWTP-------FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~-------~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +.|.+.+||-+.+...+.       ..+. -+..|...+|...|..|+++..|++|++|+.+.
T Consensus       379 dng~~~fwdwksg~nyQ~~~t~vqpGSl~-sEagI~as~fDktg~rlit~eadKtIk~~keDe  440 (460)
T KOG0285|consen  379 DNGSIMFWDWKSGHNYQRGQTIVQPGSLE-SEAGIFASCFDKTGSRLITGEADKTIKMYKEDE  440 (460)
T ss_pred             CceEEEEEecCcCcccccccccccCCccc-cccceeEEeecccCceEEeccCCcceEEEeccc
Confidence            999999999877542221       1111 135689999999999999999999999998655

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.98  E-value=2.1e-29  Score=217.63  Aligned_cols=244  Identities=28%  Similarity=0.503  Sum_probs=201.5

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...+..+.|+|++++|++++.|+.|++||+..           +..+..+..|...|.++.|.+  ++.++++++
T Consensus        46 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~-----------~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~  112 (289)
T cd00200          46 TLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET-----------GECVRTLTGHTSYVSSVAFSP--DGRILSSSS  112 (289)
T ss_pred             EEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc-----------ccceEEEeccCCcEEEEEEcC--CCCEEEEec
Confidence            4467999999999999999999999999999999962           245677889999999999964  378888888


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.|++||+.+.+  ....+..|...+.+++|+|+  +.++++++.|+.|.+|+.....   ....+..|...+..+.|
T Consensus       113 ~~~~i~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~  185 (289)
T cd00200         113 RDKTIKVWDVETGK--CLTTLRGHTDWVNSVAFSPD--GTFVASSSQDGTIKLWDLRTGK---CVATLTGHTGEVNSVAF  185 (289)
T ss_pred             CCCeEEEEECCCcE--EEEEeccCCCcEEEEEEcCc--CCEEEEEcCCCcEEEEEccccc---cceeEecCccccceEEE
Confidence            89999999998655  33445578889999999998  6678888889999999985332   23344577778999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+                 +..|++++.|+.|++||+..++.  ...+..|...|.++.|+|+    +.++++++.|+.
T Consensus       186 ~~~-----------------~~~l~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~  242 (289)
T cd00200         186 SPD-----------------GEKLLSSSSDGTIKLWDLSTGKC--LGTLRGHENGVNSVAFSPD----GYLLASGSEDGT  242 (289)
T ss_pred             CCC-----------------cCEEEEecCCCcEEEEECCCCce--ecchhhcCCceEEEEEcCC----CcEEEEEcCCCc
Confidence            996                 35788899999999999987643  3456688889999999996    778888888999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      |++|+.....  ....+..|...|.+++|+|+++.|++++.|+.+++|+
T Consensus       243 i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         243 IRVWDLRTGE--CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEEEEcCCce--eEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            9999987643  2334556778899999999999999999999999995

>KOG0315|consensus

Probab=99.98  E-value=4.4e-30  Score=207.53  Aligned_cols=234  Identities=17%  Similarity=0.269  Sum_probs=194.0

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFK  104 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~  104 (318)
                      ..+|+|+|+|.|||+|...           +|.+.++++-..+.|+.+...+  +++.||.|+ -..||+||+.+....+
T Consensus        10 ~viLvsA~YDhTIRfWqa~-----------tG~C~rTiqh~dsqVNrLeiTp--dk~~LAaa~-~qhvRlyD~~S~np~P   75 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQAL-----------TGICSRTIQHPDSQVNRLEITP--DKKDLAAAG-NQHVRLYDLNSNNPNP   75 (311)
T ss_pred             ceEEEeccCcceeeeeehh-----------cCeEEEEEecCccceeeEEEcC--Ccchhhhcc-CCeeEEEEccCCCCCc
Confidence            4689999999999999886           5789999997788899999864  467777776 4689999999887667


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      +.++++|...|.+|.|..+  ++.+.+|+.||+++|||.+..    ..++...|..+|+++..+|+.             
T Consensus        76 v~t~e~h~kNVtaVgF~~d--grWMyTgseDgt~kIWdlR~~----~~qR~~~~~spVn~vvlhpnQ-------------  136 (311)
T KOG0315|consen   76 VATFEGHTKNVTAVGFQCD--GRWMYTGSEDGTVKIWDLRSL----SCQRNYQHNSPVNTVVLHPNQ-------------  136 (311)
T ss_pred             eeEEeccCCceEEEEEeec--CeEEEecCCCceEEEEeccCc----ccchhccCCCCcceEEecCCc-------------
Confidence            7788999999999999998  889999999999999998653    234555677999999999973             


Q ss_pred             CCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce----e
Q psy2762         185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW----T  260 (318)
Q Consensus       185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~----~  260 (318)
                          ..|++|.++|.|||||+....+.... ++....+|.++...|+    |++++.+-.-|++.+|++-+...-    +
T Consensus       137 ----teLis~dqsg~irvWDl~~~~c~~~l-iPe~~~~i~sl~v~~d----gsml~a~nnkG~cyvW~l~~~~~~s~l~P  207 (311)
T KOG0315|consen  137 ----TELISGDQSGNIRVWDLGENSCTHEL-IPEDDTSIQSLTVMPD----GSMLAAANNKGNCYVWRLLNHQTASELEP  207 (311)
T ss_pred             ----ceEEeecCCCcEEEEEccCCcccccc-CCCCCcceeeEEEcCC----CcEEEEecCCccEEEEEccCCCccccceE
Confidence                46999999999999999876543322 2344567999999996    899999999999999998664321    1


Q ss_pred             eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       261 ~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ...+..|+..+..+-+|||+++||++|.|.+|+||+.+..
T Consensus       208 ~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~  247 (311)
T KOG0315|consen  208 VHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF  247 (311)
T ss_pred             hhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence            1234567889999999999999999999999999997664

>KOG0291|consensus

Probab=99.97  E-value=1.4e-29  Score=231.36  Aligned_cols=247  Identities=21%  Similarity=0.330  Sum_probs=193.6

Q ss_pred             cceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      +.+|..+.|+..|..||-|+. =|-+-||+...           ..-+...++|...++++++++  ||+++|+|+.||.
T Consensus       307 ~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-----------EsYVlKQQgH~~~i~~l~YSp--Dgq~iaTG~eDgK  373 (893)
T KOG0291|consen  307 DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-----------ESYVLKQQGHSDRITSLAYSP--DGQLIATGAEDGK  373 (893)
T ss_pred             cceeeEEEecccCCEEEEcCCccceEEEEEeec-----------cceeeeccccccceeeEEECC--CCcEEEeccCCCc
Confidence            457888999999999999764 47899999852           134556789999999999974  6999999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc-ccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH-TIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~  170 (318)
                      |||||..++-  |..++..|++.|+.+.|+..  +..+++.+.||+|+.||+..-.+   .+.+... +..-.+++-.|.
T Consensus       374 VKvWn~~Sgf--C~vTFteHts~Vt~v~f~~~--g~~llssSLDGtVRAwDlkRYrN---fRTft~P~p~QfscvavD~s  446 (893)
T KOG0291|consen  374 VKVWNTQSGF--CFVTFTEHTSGVTAVQFTAR--GNVLLSSSLDGTVRAWDLKRYRN---FRTFTSPEPIQFSCVAVDPS  446 (893)
T ss_pred             EEEEeccCce--EEEEeccCCCceEEEEEEec--CCEEEEeecCCeEEeeeecccce---eeeecCCCceeeeEEEEcCC
Confidence            9999998875  55567899999999999988  77899999999999999742221   1122111 111234555553


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                                       +..+..|+.|. .|.||++++++.  .-.+.||.++|.+++|+|.    +..|+|+|.|++||
T Consensus       447 -----------------GelV~AG~~d~F~IfvWS~qTGql--lDiLsGHEgPVs~l~f~~~----~~~LaS~SWDkTVR  503 (893)
T KOG0291|consen  447 -----------------GELVCAGAQDSFEIFVWSVQTGQL--LDILSGHEGPVSGLSFSPD----GSLLASGSWDKTVR  503 (893)
T ss_pred             -----------------CCEEEeeccceEEEEEEEeecCee--eehhcCCCCcceeeEEccc----cCeEEeccccceEE
Confidence                             45677777776 499999999975  3457899999999999996    88999999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      +|+.-....  ..+.-.+...|..|+|.|||+.||++.-||.+.+||.+...+.-
T Consensus       504 iW~if~s~~--~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~  556 (893)
T KOG0291|consen  504 IWDIFSSSG--TVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVG  556 (893)
T ss_pred             EEEeeccCc--eeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeec
Confidence            999755321  12222345679999999999999999999999999988766553

>KOG0296|consensus

Probab=99.97  E-value=6.5e-30  Score=216.36  Aligned_cols=251  Identities=22%  Similarity=0.372  Sum_probs=197.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|++.|.+++.+|+.++++|||.|..-.||+..           ++.....+.+|++.|+++.|++  +|.+||||+.+
T Consensus        61 ~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~-----------~ge~~~eltgHKDSVt~~~Fsh--dgtlLATGdms  127 (399)
T KOG0296|consen   61 DKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDIS-----------TGEFAGELTGHKDSVTCCSFSH--DGTLLATGDMS  127 (399)
T ss_pred             hhcCCceEEEEeCCCCceEEecCCCceEEEEEcc-----------CCcceeEecCCCCceEEEEEcc--CceEEEecCCC
Confidence            4899999999999999999999999999999996           3457889999999999999986  59999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |.|+||+..++...  +++...-..+.-+.|+|.  ..+|++|+.||.+-+|.+.+.   ...+.+.+|..+|++-.|.|
T Consensus       128 G~v~v~~~stg~~~--~~~~~e~~dieWl~WHp~--a~illAG~~DGsvWmw~ip~~---~~~kv~~Gh~~~ct~G~f~p  200 (399)
T KOG0296|consen  128 GKVLVFKVSTGGEQ--WKLDQEVEDIEWLKWHPR--AHILLAGSTDGSVWMWQIPSQ---ALCKVMSGHNSPCTCGEFIP  200 (399)
T ss_pred             ccEEEEEcccCceE--EEeecccCceEEEEeccc--ccEEEeecCCCcEEEEECCCc---ceeeEecCCCCCcccccccC
Confidence            99999999887533  334334466888999996  789999999999999987432   23445669999999999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE------c---------------------------
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK------L---------------------------  216 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~------~---------------------------  216 (318)
                      +                 |+.++++..||+|++||..++++....+      +                           
T Consensus       201 d-----------------GKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~  263 (399)
T KOG0296|consen  201 D-----------------GKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNG  263 (399)
T ss_pred             C-----------------CceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccc
Confidence            7                 5789999999999999988764322111      0                           


Q ss_pred             --------c--------cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762         217 --------E--------NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       217 --------~--------~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg  280 (318)
                              .        .+...+.||.|.|... .=.+.|+|+.||+|.|||+....   ++..-.|+..|..+.|-+ .
T Consensus       264 sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss-~lpL~A~G~vdG~i~iyD~a~~~---~R~~c~he~~V~~l~w~~-t  338 (399)
T KOG0296|consen  264 SGKVVNCNNGTVPELKPSQEELDESVESIPSSS-KLPLAACGSVDGTIAIYDLAAST---LRHICEHEDGVTKLKWLN-T  338 (399)
T ss_pred             cceEEEecCCCCccccccchhhhhhhhhccccc-ccchhhcccccceEEEEecccch---hheeccCCCceEEEEEcC-c
Confidence                    0        1111222333333211 12357899999999999987643   444556888999999999 6


Q ss_pred             CEEEEEeCCCeEEEEEECCCCc
Q psy2762         281 DILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .+|++++.||.||+||.+++-.
T Consensus       339 ~~l~t~c~~g~v~~wDaRtG~l  360 (399)
T KOG0296|consen  339 DYLLTACANGKVRQWDARTGQL  360 (399)
T ss_pred             chheeeccCceEEeeeccccce
Confidence            7899999999999999888643

>KOG0265|consensus

Probab=99.97  E-value=3.9e-30  Score=212.78  Aligned_cols=244  Identities=18%  Similarity=0.261  Sum_probs=198.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||++.|..+.|.+|++.|+|||.|++|+.||++           +|+.++.+++|.+-|+.+.- ......++.|++
T Consensus        85 ~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~-----------tG~~~rk~k~h~~~vNs~~p-~rrg~~lv~Sgs  152 (338)
T KOG0265|consen   85 VLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE-----------TGKRIRKHKGHTSFVNSLDP-SRRGPQLVCSGS  152 (338)
T ss_pred             eeccccceeEeeeeccCCCEEEEecCCceEEEEecc-----------cceeeehhccccceeeecCc-cccCCeEEEecC
Confidence            346999999999999999999999999999999997           57889999999999999873 233457899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++++|||+++...++++   .-+..+.++.|+.+  ...+.+|+.|+.|++||++.+.   -...+.+|..+|..++.
T Consensus       153 dD~t~kl~D~R~k~~~~t~---~~kyqltAv~f~d~--s~qv~sggIdn~ikvWd~r~~d---~~~~lsGh~DtIt~lsl  224 (338)
T KOG0265|consen  153 DDGTLKLWDIRKKEAIKTF---ENKYQLTAVGFKDT--SDQVISGGIDNDIKVWDLRKND---GLYTLSGHADTITGLSL  224 (338)
T ss_pred             CCceEEEEeecccchhhcc---ccceeEEEEEeccc--ccceeeccccCceeeeccccCc---ceEEeecccCceeeEEe
Confidence            9999999999876543332   12456889999977  4568899999999999986554   24566799999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEccc--CCCC--eeEEEEccCCCCCccEEEE
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLEN--HSDW--VRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~--h~~~--V~~v~~sp~~~~~~~~l~s  241 (318)
                      +|+                 +.++.+-+.|+++++||++.-.  ......+++  |+..  ...++|+|+    ++.+..
T Consensus       225 s~~-----------------gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~----~~~i~a  283 (338)
T KOG0265|consen  225 SRY-----------------GSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPN----GTKITA  283 (338)
T ss_pred             ccC-----------------CCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCC----CCcccc
Confidence            997                 4689999999999999976321  011233444  3333  356799996    788999


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ++.|+.+.+||.....  ....+++|...|+.++|+|....|.+++.|+++.+
T Consensus       284 gs~dr~vyvwd~~~r~--~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  284 GSADRFVYVWDTTSRR--ILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL  334 (338)
T ss_pred             ccccceEEEeeccccc--EEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence            9999999999987644  34567899999999999999999999999998865

>KOG0310|consensus

Probab=99.97  E-value=4.8e-30  Score=224.32  Aligned_cols=243  Identities=23%  Similarity=0.289  Sum_probs=201.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      -.++.|+++.|-.||++|+.|...|.|+|||+.           +...++.+.+|+.+|..+.|. |.++..|++|+.|+
T Consensus        66 rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k-----------~r~iLR~~~ah~apv~~~~f~-~~d~t~l~s~sDd~  133 (487)
T KOG0310|consen   66 RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK-----------SRVILRQLYAHQAPVHVTKFS-PQDNTMLVSGSDDK  133 (487)
T ss_pred             hhccceeEEEeecCCeEEEccCCcCcEEEeccc-----------cHHHHHHHhhccCceeEEEec-ccCCeEEEecCCCc
Confidence            457889999999999999999999999999965           235678899999999999995 56899999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .+++||+.++. + ...+.+|+..|.|.+|+|.. ..++++|+.||.|++||.+...   .......|..||..+.+-|.
T Consensus       134 v~k~~d~s~a~-v-~~~l~~htDYVR~g~~~~~~-~hivvtGsYDg~vrl~DtR~~~---~~v~elnhg~pVe~vl~lps  207 (487)
T KOG0310|consen  134 VVKYWDLSTAY-V-QAELSGHTDYVRCGDISPAN-DHIVVTGSYDGKVRLWDTRSLT---SRVVELNHGCPVESVLALPS  207 (487)
T ss_pred             eEEEEEcCCcE-E-EEEecCCcceeEeeccccCC-CeEEEecCCCceEEEEEeccCC---ceeEEecCCCceeeEEEcCC
Confidence            99999998765 3 55788999999999999974 5789999999999999986543   12233478889999888875


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +..||+++. +.|||||+.++.. ....+..|...|+|+++..+    ++.|+|+|.|+.+++
T Consensus       208 -----------------gs~iasAgG-n~vkVWDl~~G~q-ll~~~~~H~KtVTcL~l~s~----~~rLlS~sLD~~VKV  264 (487)
T KOG0310|consen  208 -----------------GSLIASAGG-NSVKVWDLTTGGQ-LLTSMFNHNKTVTCLRLASD----STRLLSGSLDRHVKV  264 (487)
T ss_pred             -----------------CCEEEEcCC-CeEEEEEecCCce-ehhhhhcccceEEEEEeecC----CceEeecccccceEE
Confidence                             457888876 4799999986543 34455669999999999985    789999999999999


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |+..+.   .......+.++|.+++.+||++.++.|..||.+-+=+.
T Consensus       265 fd~t~~---Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  265 FDTTNY---KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             EEccce---EEEEeeecccceeeEEecCCCceEEEecccceeeeehh
Confidence            997653   22233457789999999999999999999998877643

>KOG1407|consensus

Probab=99.97  E-value=7.6e-30  Score=207.40  Aligned_cols=250  Identities=22%  Similarity=0.343  Sum_probs=193.4

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.+.+|...|.+++|+-+|.+|++|+.|++++||+++..         ....-..+++|.+.|-.+.|.+ ..+.+|+++
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~---------r~~~~~~~~gh~~svdql~w~~-~~~d~~ata   83 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD---------RFRKELVYRGHTDSVDQLCWDP-KHPDLFATA   83 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch---------hhhhhhcccCCCcchhhheeCC-CCCcceEEe
Confidence            456789999999999999999999999999999999732         1112245689999999999965 578999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|++|++||+..+++....  ....+.+ -+.|+|+  +.+++.++.|..|.+.|.+...    ..........++.+.
T Consensus        84 s~dk~ir~wd~r~~k~~~~i--~~~~eni-~i~wsp~--g~~~~~~~kdD~it~id~r~~~----~~~~~~~~~e~ne~~  154 (313)
T KOG1407|consen   84 SGDKTIRIWDIRSGKCTARI--ETKGENI-NITWSPD--GEYIAVGNKDDRITFIDARTYK----IVNEEQFKFEVNEIS  154 (313)
T ss_pred             cCCceEEEEEeccCcEEEEe--eccCcce-EEEEcCC--CCEEEEecCcccEEEEEecccc----eeehhcccceeeeee
Confidence            99999999999988754443  3333444 4889998  7789999999999988864322    111112233456777


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+..                 ...|..-...|+|.|...-.  +.+...+++|.....||.|+|+    |++||+||.|.
T Consensus       155 w~~~-----------------nd~Fflt~GlG~v~ILsyps--Lkpv~si~AH~snCicI~f~p~----GryfA~GsADA  211 (313)
T KOG1407|consen  155 WNNS-----------------NDLFFLTNGLGCVEILSYPS--LKPVQSIKAHPSNCICIEFDPD----GRYFATGSADA  211 (313)
T ss_pred             ecCC-----------------CCEEEEecCCceEEEEeccc--cccccccccCCcceEEEEECCC----CceEeeccccc
Confidence            7632                 13444445558999976543  3456778999999999999996    99999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .+.+||+++..+  .+.+..++=+|..++||.||++||||++|.-|-|=++.+|
T Consensus       212 lvSLWD~~ELiC--~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG  263 (313)
T KOG1407|consen  212 LVSLWDVDELIC--ERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG  263 (313)
T ss_pred             eeeccChhHhhh--heeeccccCceEEEEeccCcceeeccCccceEEeEecccC
Confidence            999999988654  3456677889999999999999999999998877555554

>KOG0318|consensus

Probab=99.97  E-value=3.5e-29  Score=220.62  Aligned_cols=253  Identities=19%  Similarity=0.411  Sum_probs=204.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +.+.|...|+-++|+|.|-|||||...|+|||||....         ...+-.+++.-.++|..++|+.  ++++++..+
T Consensus        54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~---------~hiLKnef~v~aG~I~Di~Wd~--ds~RI~avG  122 (603)
T KOG0318|consen   54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQK---------EHILKNEFQVLAGPIKDISWDF--DSKRIAAVG  122 (603)
T ss_pred             eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCc---------ceeeeeeeeecccccccceeCC--CCcEEEEEe
Confidence            56899999999999999999999999999999997521         2234456777889999999974  588888887


Q ss_pred             CC----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-eeccccccc
Q psy2762          88 YD----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-KIAAHTIGC  162 (318)
Q Consensus        88 ~D----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~~~~h~~~v  162 (318)
                      +.    |.+.+||..+    ....+.+|...|++++|.|.. ..++++|+.|++|.+++-   . .++.+ ....|..-|
T Consensus       123 EGrerfg~~F~~DSG~----SvGei~GhSr~ins~~~KpsR-PfRi~T~sdDn~v~ffeG---P-PFKFk~s~r~HskFV  193 (603)
T KOG0318|consen  123 EGRERFGHVFLWDSGN----SVGEITGHSRRINSVDFKPSR-PFRIATGSDDNTVAFFEG---P-PFKFKSSFREHSKFV  193 (603)
T ss_pred             cCccceeEEEEecCCC----ccceeeccceeEeeeeccCCC-ceEEEeccCCCeEEEeeC---C-Ceeeeecccccccce
Confidence            75    4678888543    344678999999999999974 678999999999999852   1 12221 233688889


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE-cccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-LENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      +++.|+|+                 +..||+.+.||+|.|||-.+++.+-... -.+|.+.|+.|+|+|+    +++|+|
T Consensus       194 ~~VRysPD-----------------G~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPD----s~~~~T  252 (603)
T KOG0318|consen  194 NCVRYSPD-----------------GSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPD----STQFLT  252 (603)
T ss_pred             eeEEECCC-----------------CCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCC----CceEEE
Confidence            99999998                 5789999999999999988886532222 3489999999999996    889999


Q ss_pred             EeCCCeEEEEEcCCCcc------------------e-----------------------eeEEeeecCCcEEEEEEcCCC
Q psy2762         242 CSQDRKVIIWTSNDYVT------------------W-----------------------TPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~------------------~-----------------------~~~~~~~~~~~v~~v~~spdg  280 (318)
                      +|.|+++||||+.....                  |                       .+..+.+|...|.+++.+|||
T Consensus       253 ~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~  332 (603)
T KOG0318|consen  253 VSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG  332 (603)
T ss_pred             ecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC
Confidence            99999999999876420                  1                       122456788899999999999


Q ss_pred             CEEEEEeCCCeEEEEEECCCC
Q psy2762         281 DILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ++|.||+.||.|.-|+...+.
T Consensus       333 ~~i~SgsyDG~I~~W~~~~g~  353 (603)
T KOG0318|consen  333 KTIYSGSYDGHINSWDSGSGT  353 (603)
T ss_pred             CEEEeeccCceEEEEecCCcc
Confidence            999999999999999987643

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=2e-28  Score=228.87  Aligned_cols=244  Identities=15%  Similarity=0.234  Sum_probs=178.7

Q ss_pred             eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE------EE
Q psy2762          31 CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW------FK  104 (318)
Q Consensus        31 ~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~------~~  104 (318)
                      ||.++.|++|+...           ...+..+.+|.+.|.+++|+ |.++.+||||+.|++|+|||+.++..      .+
T Consensus        50 GG~~gvI~L~~~~r-----------~~~v~~L~gH~~~V~~lafs-P~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p  117 (568)
T PTZ00420         50 GGLIGAIRLENQMR-----------KPPVIKLKGHTSSILDLQFN-PCFSEILASGSEDLTIRVWEIPHNDESVKEIKDP  117 (568)
T ss_pred             CCceeEEEeeecCC-----------CceEEEEcCCCCCEEEEEEc-CCCCCEEEEEeCCCeEEEEECCCCCccccccccc
Confidence            66788889998752           24578899999999999996 44578999999999999999875321      12


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      ...+.+|...|.+|+|+|+. ..++++++.|++|+|||+....   ....+ .|...+.+++|+|+              
T Consensus       118 ~~~L~gH~~~V~sVaf~P~g-~~iLaSgS~DgtIrIWDl~tg~---~~~~i-~~~~~V~Slswspd--------------  178 (568)
T PTZ00420        118 QCILKGHKKKISIIDWNPMN-YYIMCSSGFDSFVNIWDIENEK---RAFQI-NMPKKLSSLKWNIK--------------  178 (568)
T ss_pred             eEEeecCCCcEEEEEECCCC-CeEEEEEeCCCeEEEEECCCCc---EEEEE-ecCCcEEEEEECCC--------------
Confidence            33567899999999999984 3467899999999999986543   12222 35567999999997              


Q ss_pred             CCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE-----EEccCCCCCccEEEEEeCCC----eEEEEEcCC
Q psy2762         185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV-----AWAPSWGLSKCMIASCSQDR----KVIIWTSND  255 (318)
Q Consensus       185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v-----~~sp~~~~~~~~l~s~s~D~----~i~vw~~~~  255 (318)
                         +..|++++.|++|+|||+++++.  ..++.+|.+.+...     .|+++    +.+|+|+|.|+    +|+|||+..
T Consensus       179 ---G~lLat~s~D~~IrIwD~Rsg~~--i~tl~gH~g~~~s~~v~~~~fs~d----~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        179 ---GNLLSGTCVGKHMHIIDPRKQEI--ASSFHIHDGGKNTKNIWIDGLGGD----DNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             ---CCEEEEEecCCEEEEEECCCCcE--EEEEecccCCceeEEEEeeeEcCC----CCEEEEEEcCCCCccEEEEEECCC
Confidence               56899999999999999988764  35678898765443     34454    67888888774    799999886


Q ss_pred             CcceeeEEeeecC---CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecccccccc
Q psy2762         256 YVTWTPFIMNTFD---DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTSEQRA  317 (318)
Q Consensus       256 ~~~~~~~~~~~~~---~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~  317 (318)
                      ...  +.....++   ..+......++|.++++|+.|++||+|++..+ ....+.++....-+++
T Consensus       250 ~~~--pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~-~~~~l~~~~s~~p~~g  311 (568)
T PTZ00420        250 TTS--ALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLG-SIRKVNEYKSCSPFRS  311 (568)
T ss_pred             CCC--ceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCC-cEEeecccccCCCccc
Confidence            331  11222222   33334444556999999999999999998764 5556666665554444

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=2.1e-28  Score=227.28  Aligned_cols=256  Identities=15%  Similarity=0.144  Sum_probs=182.9

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +..||.+.|++++|+| ++++|+|||.|++|+|||+.....    .......+..+.+|...|.+++|+ |..+++|+||
T Consensus        70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~----~~~~~~~l~~L~gH~~~V~~l~f~-P~~~~iLaSg  144 (493)
T PTZ00421         70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGL----TQNISDPIVHLQGHTKKVGIVSFH-PSAMNVLASA  144 (493)
T ss_pred             eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcc----ccccCcceEEecCCCCcEEEEEeC-cCCCCEEEEE
Confidence            3569999999999999 889999999999999999863210    000123567899999999999996 4445799999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc-ccee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG-CNAV  165 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~-v~~~  165 (318)
                      +.|++|+|||+.++.  ....+.+|...|.+++|+|+  +.++++++.|++|++||++.+.   ....+.+|... ...+
T Consensus       145 s~DgtVrIWDl~tg~--~~~~l~~h~~~V~sla~spd--G~lLatgs~Dg~IrIwD~rsg~---~v~tl~~H~~~~~~~~  217 (493)
T PTZ00421        145 GADMVVNVWDVERGK--AVEVIKCHSDQITSLEWNLD--GSLLCTTSKDKKLNIIDPRDGT---IVSSVEAHASAKSQRC  217 (493)
T ss_pred             eCCCEEEEEECCCCe--EEEEEcCCCCceEEEEEECC--CCEEEEecCCCEEEEEECCCCc---EEEEEecCCCCcceEE
Confidence            999999999998775  34456789999999999998  7789999999999999986543   23455677654 3467


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEe----cCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSG----GCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasg----s~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .|.|+.                 ..|+++    +.|+.|+|||+++... +...... +...+....|+|+    +.+|+
T Consensus       218 ~w~~~~-----------------~~ivt~G~s~s~Dr~VklWDlr~~~~-p~~~~~~d~~~~~~~~~~d~d----~~~L~  275 (493)
T PTZ00421        218 LWAKRK-----------------DLIITLGCSKSQQRQIMLWDTRKMAS-PYSTVDLDQSSALFIPFFDED----TNLLY  275 (493)
T ss_pred             EEcCCC-----------------CeEEEEecCCCCCCeEEEEeCCCCCC-ceeEeccCCCCceEEEEEcCC----CCEEE
Confidence            788752                 344443    3589999999875431 1222222 3344566678885    67888


Q ss_pred             EEe-CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         241 SCS-QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       241 s~s-~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +++ .|++|++|++.+.... .........++..++|.|.-..=+.-  --..|++++...
T Consensus       276 lggkgDg~Iriwdl~~~~~~-~~~~~~s~~~~~g~~~~pk~~~dv~~--~Ei~r~~~l~~~  333 (493)
T PTZ00421        276 IGSKGEGNIRCFELMNERLT-FCSSYSSVEPHKGLCMMPKWSLDTRK--CEIARFYALTYH  333 (493)
T ss_pred             EEEeCCCeEEEEEeeCCceE-EEeeccCCCCCcceEecccccccccc--eeeeEEEEecCC
Confidence            887 4999999999875411 11112345678888999864322222  235688887543

>KOG0316|consensus

Probab=99.97  E-value=4e-29  Score=200.54  Aligned_cols=242  Identities=21%  Similarity=0.286  Sum_probs=198.0

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +...||...|..++.+.|...+++||.|+.|.+||++           +|++++.+++|.+.|+.++|+.  +...++||
T Consensus        53 ktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~-----------TGkv~Rr~rgH~aqVNtV~fNe--esSVv~Sg  119 (307)
T KOG0316|consen   53 KTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN-----------TGKVDRRFRGHLAQVNTVRFNE--ESSVVASG  119 (307)
T ss_pred             eeecCCCceeeeccccccccccccCCCCceEEEEEcc-----------cCeeeeecccccceeeEEEecC--cceEEEec
Confidence            4678999999999999999999999999999999997           5789999999999999999963  58999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      |.|.++++||-++....+++.+......|.+|..+.    +.+++|+.||+++.||++.+.-     ...-...||++++
T Consensus       120 sfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~----heIvaGS~DGtvRtydiR~G~l-----~sDy~g~pit~vs  190 (307)
T KOG0316|consen  120 SFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE----HEIVAGSVDGTVRTYDIRKGTL-----SSDYFGHPITSVS  190 (307)
T ss_pred             cccceeEEEEcccCCCCccchhhhhcCceeEEEecc----cEEEeeccCCcEEEEEeeccee-----ehhhcCCcceeEE
Confidence            999999999988877777778888889999999885    4689999999999999876531     1112344799999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeE--EEEccCCCCCccEEEEEeC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRD--VAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~--v~~sp~~~~~~~~l~s~s~  244 (318)
                      |+|+                 ++..+.++-|++||+.|.+++++  +..++||...-+.  ++++.    +..++++||+
T Consensus       191 ~s~d-----------------~nc~La~~l~stlrLlDk~tGkl--L~sYkGhkn~eykldc~l~q----sdthV~sgSE  247 (307)
T KOG0316|consen  191 FSKD-----------------GNCSLASSLDSTLRLLDKETGKL--LKSYKGHKNMEYKLDCCLNQ----SDTHVFSGSE  247 (307)
T ss_pred             ecCC-----------------CCEEEEeeccceeeecccchhHH--HHHhcccccceeeeeeeecc----cceeEEeccC
Confidence            9997                 46788899999999999999874  5678899766544  45554    3789999999


Q ss_pred             CCeEEEEEcCCCcceeeEEeeecCCc-EEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMNTFDDV-VWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~~~~~~-v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ||.|.+||+.+..  ....+..+..+ |.+++++|.-..|.++.. +...+|.
T Consensus       248 DG~Vy~wdLvd~~--~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~  297 (307)
T KOG0316|consen  248 DGKVYFWDLVDET--QISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY  297 (307)
T ss_pred             CceEEEEEeccce--eeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence            9999999998754  22334445555 899999999877777764 4556665

>KOG0313|consensus

Probab=99.97  E-value=2e-29  Score=214.40  Aligned_cols=215  Identities=27%  Similarity=0.473  Sum_probs=177.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCC--------------CCCCCcceEEEEecccccCeEEEEec
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKD--------------DSHSQKGTLIAELKGHSGPVWQVAWA   75 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~--------------~~~~~~~~~~~~~~~h~~~V~~v~~~   75 (318)
                      .||+..|.++..+++|.+++|||.|.+|+||+.+......              +.+...+.++.++.||+++|.++.|+
T Consensus       190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~  269 (423)
T KOG0313|consen  190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWS  269 (423)
T ss_pred             cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEc
Confidence            3999999999999999999999999999999943111110              11223455688999999999999996


Q ss_pred             CCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          76 HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        76 ~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      .   ...++|+|+|.+|+.||+.++..+....   .+...+||+.+|.  ..++++|+.|..|++||++.+......+.+
T Consensus       270 d---~~v~yS~SwDHTIk~WDletg~~~~~~~---~~ksl~~i~~~~~--~~Ll~~gssdr~irl~DPR~~~gs~v~~s~  341 (423)
T KOG0313|consen  270 D---ATVIYSVSWDHTIKVWDLETGGLKSTLT---TNKSLNCISYSPL--SKLLASGSSDRHIRLWDPRTGDGSVVSQSL  341 (423)
T ss_pred             C---CCceEeecccceEEEEEeecccceeeee---cCcceeEeecccc--cceeeecCCCCceeecCCCCCCCceeEEee
Confidence            3   6789999999999999999887544332   3567899999997  679999999999999999877655555667


Q ss_pred             cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      .+|..-|..+.|+|..                -..|++|+.|+++++||.+.-. .++..+.+|.+.|.++.|+.     
T Consensus       342 ~gH~nwVssvkwsp~~----------------~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~~-----  399 (423)
T KOG0313|consen  342 IGHKNWVSSVKWSPTN----------------EFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWNE-----  399 (423)
T ss_pred             ecchhhhhheecCCCC----------------ceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEeccC-----
Confidence            7999999999999964                3579999999999999988643 35677889999999999986     


Q ss_pred             ccEEEEEeCCCeEEEEEcC
Q psy2762         236 KCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~  254 (318)
                      +..|+|||.|.+|+|+...
T Consensus       400 ~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  400 GGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             CceEEeccCcceEEEeccc
Confidence            6789999999999999643

>KOG0640|consensus

Probab=99.97  E-value=1e-29  Score=211.27  Aligned_cols=264  Identities=20%  Similarity=0.275  Sum_probs=202.4

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCC------CCCC-cceEEEEecccccCeEEEEecCCCCCc
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD------SHSQ-KGTLIAELKGHSGPVWQVAWAHPQFGT   81 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~------~~~~-~~~~~~~~~~h~~~V~~v~~~~~~~~~   81 (318)
                      .+.|+.++++.+|+|||.++|+||.|-.|+|.|++++..+..      ..++ ...++++|..|.++|+++.| ||. ..
T Consensus       108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F-HPr-e~  185 (430)
T KOG0640|consen  108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF-HPR-ET  185 (430)
T ss_pred             EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee-cch-hh
Confidence            467999999999999999999999999999999985433321      1122 23579999999999999999 664 79


Q ss_pred             EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          82 LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      .|+||+.|++|+++|+.....+..++.-.-..+|.+++|+|.  +.+++.|..--++++||+..-..-.....-..|...
T Consensus       186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPs--GefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~a  263 (430)
T KOG0640|consen  186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPS--GEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGA  263 (430)
T ss_pred             eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCC--CceEEEecCCCceeEEeccceeEeeecCcccccccc
Confidence            999999999999999875432222222223567999999998  788999998899999997432110001122368889


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC-CCeeEEEEccCCCCCccEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS-DWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~~~l~  240 (318)
                      |+++.+++.                 +...++||.||.|||||--.+.++.... +.|. ..|.+..|..+    +++|.
T Consensus       264 i~~V~Ys~t-----------------~~lYvTaSkDG~IklwDGVS~rCv~t~~-~AH~gsevcSa~Ftkn----~kyiL  321 (430)
T KOG0640|consen  264 ITQVRYSST-----------------GSLYVTASKDGAIKLWDGVSNRCVRTIG-NAHGGSEVCSAVFTKN----GKYIL  321 (430)
T ss_pred             eeEEEecCC-----------------ccEEEEeccCCcEEeeccccHHHHHHHH-hhcCCceeeeEEEccC----CeEEe
Confidence            999999986                 5788999999999999977776654433 4564 45888889874    89999


Q ss_pred             EEeCCCeEEEEEcCCCccee----------------------------------------e-------EEeeecCCcEEE
Q psy2762         241 SCSQDRKVIIWTSNDYVTWT----------------------------------------P-------FIMNTFDDVVWN  273 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~----------------------------------------~-------~~~~~~~~~v~~  273 (318)
                      |.|.|..+++|.+.+.+...                                        .       ....+|.+.+.-
T Consensus       322 sSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~  401 (430)
T KOG0640|consen  322 SSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRW  401 (430)
T ss_pred             ecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceE
Confidence            99999999999987753110                                        0       011256678889


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +.-||.+.-+.+++.|..+|+|...
T Consensus       402 i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  402 IVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             EEeCCCCCceeeecccceeeeeeec
Confidence            9999999999999999999999855

>KOG0275|consensus

Probab=99.97  E-value=2.1e-29  Score=210.68  Aligned_cols=267  Identities=17%  Similarity=0.222  Sum_probs=206.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -|.+.-+.|..|+|||+||+|||.||-|.|||.-.+-...+-..+.   -..+--|.++|.|+.|+.  |...||||+.|
T Consensus       210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQA---qd~fMMmd~aVlci~FSR--DsEMlAsGsqD  284 (508)
T KOG0275|consen  210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQA---QDNFMMMDDAVLCISFSR--DSEMLASGSQD  284 (508)
T ss_pred             cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhh---hcceeecccceEEEeecc--cHHHhhccCcC
Confidence            4667789999999999999999999999999975321111111111   112334789999999985  58999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |.|+||.+.++.+...+. ..|...|+|+.|+.|  +..+.+++.|.++++--...++   .++++++|..-|+...|.+
T Consensus       285 GkIKvWri~tG~ClRrFd-rAHtkGvt~l~FSrD--~SqiLS~sfD~tvRiHGlKSGK---~LKEfrGHsSyvn~a~ft~  358 (508)
T KOG0275|consen  285 GKIKVWRIETGQCLRRFD-RAHTKGVTCLSFSRD--NSQILSASFDQTVRIHGLKSGK---CLKEFRGHSSYVNEATFTD  358 (508)
T ss_pred             CcEEEEEEecchHHHHhh-hhhccCeeEEEEccC--cchhhcccccceEEEeccccch---hHHHhcCccccccceEEcC
Confidence            999999999998554432 369999999999998  5568899999999997654443   3567789999999999998


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +                 |.+++++|.||+|++|+.++.++..+....+...+|++|-.-|.   +..+++.|-...+|.
T Consensus       359 d-----------------G~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PK---npeh~iVCNrsntv~  418 (508)
T KOG0275|consen  359 D-----------------GHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPK---NPEHFIVCNRSNTVY  418 (508)
T ss_pred             C-----------------CCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCC---CCceEEEEcCCCeEE
Confidence            7                 67999999999999999998887766666667778999999997   467899999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      |-+..+..-..-..-....+..-.+..||.|.++.+.++|+.+..+..-.++.=+++.
T Consensus       419 imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~  476 (508)
T KOG0275|consen  419 IMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP  476 (508)
T ss_pred             EEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee
Confidence            9988763211000001122345578999999999999999999999987776544443

>KOG0277|consensus

Probab=99.97  E-value=7.5e-30  Score=206.71  Aligned_cols=208  Identities=21%  Similarity=0.367  Sum_probs=175.6

Q ss_pred             cCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           9 DTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +.-|+..|.++.+++ ....++++|.|++|++|+.+.           ++-+.++.||..-|+...|+ |..+++|+|+|
T Consensus       100 ~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r-----------~~Sv~Tf~gh~~~Iy~a~~s-p~~~nlfas~S  167 (311)
T KOG0277|consen  100 FKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNR-----------PNSVQTFNGHNSCIYQAAFS-PHIPNLFASAS  167 (311)
T ss_pred             HHhhhhheEEeccccccceeEEeeccCCceEeecCCC-----------CcceEeecCCccEEEEEecC-CCCCCeEEEcc
Confidence            457999999999987 556788889999999999874           35688999999999999996 56899999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+++++||++...  ....++.|...|.|+.|+.-+ ..++++|+.|+.|+.||+++-+  ..+..+.+|...|..+.|
T Consensus       168 gd~~l~lwdvr~~g--k~~~i~ah~~Eil~cdw~ky~-~~vl~Tg~vd~~vr~wDir~~r--~pl~eL~gh~~AVRkvk~  242 (311)
T KOG0277|consen  168 GDGTLRLWDVRSPG--KFMSIEAHNSEILCCDWSKYN-HNVLATGGVDNLVRGWDIRNLR--TPLFELNGHGLAVRKVKF  242 (311)
T ss_pred             CCceEEEEEecCCC--ceeEEEeccceeEeecccccC-CcEEEecCCCceEEEEehhhcc--ccceeecCCceEEEEEec
Confidence            99999999987654  223367899999999999875 5689999999999999997554  235567799999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      ||.-                ...||++|.|-++||||...+. ....+.+.|++.|..+.||+-   ++.++|+++.|..
T Consensus       243 Sph~----------------~~lLaSasYDmT~riw~~~~~d-s~~e~~~~HtEFv~g~Dws~~---~~~~vAs~gWDe~  302 (311)
T KOG0277|consen  243 SPHH----------------ASLLASASYDMTVRIWDPERQD-SAIETVDHHTEFVCGLDWSLF---DPGQVASTGWDEL  302 (311)
T ss_pred             Ccch----------------hhHhhhccccceEEecccccch-hhhhhhhccceEEeccccccc---cCceeeecccccc
Confidence            9963                3579999999999999977443 234456789999999999996   6889999999999


Q ss_pred             EEEEEc
Q psy2762         248 VIIWTS  253 (318)
Q Consensus       248 i~vw~~  253 (318)
                      +.||+.
T Consensus       303 l~Vw~p  308 (311)
T KOG0277|consen  303 LYVWNP  308 (311)
T ss_pred             eeeecc
Confidence            999974

>KOG0973|consensus

Probab=99.97  E-value=1.1e-28  Score=233.74  Aligned_cols=264  Identities=25%  Similarity=0.388  Sum_probs=206.0

Q ss_pred             CCC-cceeeeeeecCCCCEEEEee--CCCcEEEEEcCCCcCCC-CCCCC-cceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762          10 TGH-EDMIHDAEMDYLGLYLATCS--SDHTVKVFNLDRNLKKD-DSHSQ-KGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus        10 ~gH-~~~v~~~~~~~~g~~l~s~s--~D~~v~vwd~~~~~~~~-~~~~~-~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      -+| +..|.+++.+|||..++|||  .|+.++||+.+ +..+. ..... -.+.+.+...|.+.|.|+.|++  ||++||
T Consensus         9 v~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~-~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~--dG~~lA   85 (942)
T KOG0973|consen    9 VNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQD-PVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP--DGSYLA   85 (942)
T ss_pred             cccCCeeEEEEEecCCceeEecCCccccccceeeccc-cccchhhhhhcccchhheeeccccCceeEEEECC--CCCeEe
Confidence            345 66789999999999999999  99999999976 22111 11111 2346788899999999999984  699999


Q ss_pred             EEECCCeEEEEeCCC----------------CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC
Q psy2762          85 SCSYDRKVIIWRGDN----------------GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN  148 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~  148 (318)
                      |||+|+.|.||....                ..+.+...+.+|.+.|..|.|+|+  +.++++++.|++|.||+..... 
T Consensus        86 sGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~--~~~lvS~s~DnsViiwn~~tF~-  162 (942)
T KOG0973|consen   86 SGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD--DSLLVSVSLDNSVIIWNAKTFE-  162 (942)
T ss_pred             eccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC--ccEEEEecccceEEEEccccce-
Confidence            999999999998651                124566778899999999999998  7799999999999999864432 


Q ss_pred             CcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---------------------
Q psy2762         149 SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---------------------  207 (318)
Q Consensus       149 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---------------------  207 (318)
                        ....+.+|...|..+.|.|-                 |+|||+-+.|++|+||+..+                     
T Consensus       163 --~~~vl~~H~s~VKGvs~DP~-----------------Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~  223 (942)
T KOG0973|consen  163 --LLKVLRGHQSLVKGVSWDPI-----------------GKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFL  223 (942)
T ss_pred             --eeeeeecccccccceEECCc-----------------cCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceee
Confidence              34567799999999999995                 68999999999999998432                     


Q ss_pred             -----------------------------CeEEEEEEcccCCCCeeEEEEccCCC---C------Cc----cEEEEEeCC
Q psy2762         208 -----------------------------DKWIEETKLENHSDWVRDVAWAPSWG---L------SK----CMIASCSQD  245 (318)
Q Consensus       208 -----------------------------~~~~~~~~~~~h~~~V~~v~~sp~~~---~------~~----~~l~s~s~D  245 (318)
                                                   +.|.....|-||..++.++.|+|..-   +      ..    +.+|+||.|
T Consensus       224 RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD  303 (942)
T KOG0973|consen  224 RLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD  303 (942)
T ss_pred             ecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCC
Confidence                                         01222344578999999999999420   0      01    378999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++|-||.....+.. ....+-+...|.+++|+|||-.|..+|.||+|.+.+.+.
T Consensus       304 rSlSVW~T~~~RPl-~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee  356 (942)
T KOG0973|consen  304 RSLSVWNTALPRPL-FVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE  356 (942)
T ss_pred             ccEEEEecCCCCch-hhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence            99999998654421 011123457899999999999999999999999998655

>KOG0274|consensus

Probab=99.97  E-value=1.4e-28  Score=229.06  Aligned_cols=242  Identities=23%  Similarity=0.323  Sum_probs=201.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      +.||.+.|.+++|..-+.+|++|+.|.+++|||..           +|.++.++.+|...|.++...    +.++++||.
T Consensus       245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~-----------sg~C~~~l~gh~stv~~~~~~----~~~~~sgs~  309 (537)
T KOG0274|consen  245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCS-----------TGECTHSLQGHTSSVRCLTID----PFLLVSGSR  309 (537)
T ss_pred             ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecC-----------CCcEEEEecCCCceEEEEEcc----CceEeeccC
Confidence            67999999999998778999999999999999986           578999999999999999852    578999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |.+|++|++.++....  .+.+|.++|+++..+    +.++++|+.|++|++|++...+   .+..+.+|...|.++.+.
T Consensus       310 D~tVkVW~v~n~~~l~--l~~~h~~~V~~v~~~----~~~lvsgs~d~~v~VW~~~~~~---cl~sl~gH~~~V~sl~~~  380 (537)
T KOG0274|consen  310 DNTVKVWDVTNGACLN--LLRGHTGPVNCVQLD----EPLLVSGSYDGTVKVWDPRTGK---CLKSLSGHTGRVYSLIVD  380 (537)
T ss_pred             CceEEEEeccCcceEE--EeccccccEEEEEec----CCEEEEEecCceEEEEEhhhce---eeeeecCCcceEEEEEec
Confidence            9999999999887544  345699999999988    3479999999999999986443   356677999999999877


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +.                  .++++|+.|++|++||+.+. ++  ..++.+|.+.|.++.+.      +.+|++++.|++
T Consensus       381 ~~------------------~~~~Sgs~D~~IkvWdl~~~~~c--~~tl~~h~~~v~~l~~~------~~~Lvs~~aD~~  434 (537)
T KOG0274|consen  381 SE------------------NRLLSGSLDTTIKVWDLRTKRKC--IHTLQGHTSLVSSLLLR------DNFLVSSSADGT  434 (537)
T ss_pred             Cc------------------ceEEeeeeccceEeecCCchhhh--hhhhcCCcccccccccc------cceeEecccccc
Confidence            52                  47999999999999999887 43  56789999999777664      568999999999


Q ss_pred             EEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         248 VIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      |++||......  ...+.+ +...|..+++.  ...+++++.|+++++||+..+...+
T Consensus       435 Ik~WD~~~~~~--~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~  488 (537)
T KOG0274|consen  435 IKLWDAEEGEC--LRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIR  488 (537)
T ss_pred             EEEeecccCce--eeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhh
Confidence            99999887653  233444 45677777776  4678889999999999988764433

>KOG0301|consensus

Probab=99.97  E-value=9.1e-29  Score=224.20  Aligned_cols=244  Identities=23%  Similarity=0.348  Sum_probs=200.0

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEE-EEecCCCCCcE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ-VAWAHPQFGTL   82 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-v~~~~~~~~~~   82 (318)
                      +|-+...||+.-|..+++.+.. .++++|.||+++||+-...         .......+.+|.+.|.. ++|.. .++.+
T Consensus         5 ~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~---------~~l~~~~~~~~~g~i~~~i~y~e-~~~~~   73 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGK---------QYLETHAFEGPKGFIANSICYAE-SDKGR   73 (745)
T ss_pred             eeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCc---------ccccceecccCcceeeccceecc-ccCcc
Confidence            4556789999999998876554 7889999999999986311         12234568889999887 88854 56778


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      |++|+.|.+|.+|...+..  +.+.+.+|.+.|.|++...+  +. +++||.|.++++|....-     ...+.+|+..|
T Consensus        74 l~~g~~D~~i~v~~~~~~~--P~~~LkgH~snVC~ls~~~~--~~-~iSgSWD~TakvW~~~~l-----~~~l~gH~asV  143 (745)
T KOG0301|consen   74 LVVGGMDTTIIVFKLSQAE--PLYTLKGHKSNVCSLSIGED--GT-LISGSWDSTAKVWRIGEL-----VYSLQGHTASV  143 (745)
T ss_pred             eEeecccceEEEEecCCCC--chhhhhccccceeeeecCCc--Cc-eEecccccceEEecchhh-----hcccCCcchhe
Confidence            9999999999999987665  66778899999999987665  44 889999999999976322     22366999999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      ..+..-|+                  +.++|||.|++||+|.-.  +  ...+|.+|++.|+.|++-|+     ..|+||
T Consensus       144 WAv~~l~e------------------~~~vTgsaDKtIklWk~~--~--~l~tf~gHtD~VRgL~vl~~-----~~flSc  196 (745)
T KOG0301|consen  144 WAVASLPE------------------NTYVTGSADKTIKLWKGG--T--LLKTFSGHTDCVRGLAVLDD-----SHFLSC  196 (745)
T ss_pred             eeeeecCC------------------CcEEeccCcceeeeccCC--c--hhhhhccchhheeeeEEecC-----CCeEee
Confidence            99988775                  369999999999999753  2  35678999999999999985     468999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +.||.||+|+..+..   ..+..+|+..|++++..+++..++|+|+|+++|||+..
T Consensus       197 sNDg~Ir~w~~~ge~---l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~  249 (745)
T KOG0301|consen  197 SNDGSIRLWDLDGEV---LLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD  249 (745)
T ss_pred             cCCceEEEEeccCce---eeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence            999999999996543   45678999999999988888899999999999999965

>KOG0274|consensus

Probab=99.97  E-value=2.6e-28  Score=227.35  Aligned_cols=243  Identities=23%  Similarity=0.378  Sum_probs=200.3

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      |...+.+..|.  ..++++++.|++|++||..           .+..+.+ +.||.+.|+++.+..  -+.+|+||+.|+
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~-----------~~~~i~~~l~GH~g~V~~l~~~~--~~~~lvsgS~D~  271 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLN-----------NGYLILTRLVGHFGGVWGLAFPS--GGDKLVSGSTDK  271 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecc-----------cceEEEeeccCCCCCceeEEEec--CCCEEEEEecCC
Confidence            57778888786  6689999999999999986           3456666 999999999999953  478999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +++|||..++.+  +..+.+|.+.|.++...+.    ++++|+.|.+|++|++.+++   .+..+.+|..+|+++..+- 
T Consensus       272 t~rvWd~~sg~C--~~~l~gh~stv~~~~~~~~----~~~sgs~D~tVkVW~v~n~~---~l~l~~~h~~~V~~v~~~~-  341 (537)
T KOG0274|consen  272 TERVWDCSTGEC--THSLQGHTSSVRCLTIDPF----LLVSGSRDNTVKVWDVTNGA---CLNLLRGHTGPVNCVQLDE-  341 (537)
T ss_pred             cEEeEecCCCcE--EEEecCCCceEEEEEccCc----eEeeccCCceEEEEeccCcc---eEEEeccccccEEEEEecC-
Confidence            999999998875  4456799999999987753    68889999999999986543   3444556999999998762 


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                        .++++|+.|++|++||...+++  ..++.+|..+|+++.+.+.     .++++|+.|++|++
T Consensus       342 ------------------~~lvsgs~d~~v~VW~~~~~~c--l~sl~gH~~~V~sl~~~~~-----~~~~Sgs~D~~Ikv  396 (537)
T KOG0274|consen  342 ------------------PLLVSGSYDGTVKVWDPRTGKC--LKSLSGHTGRVYSLIVDSE-----NRLLSGSLDTTIKV  396 (537)
T ss_pred             ------------------CEEEEEecCceEEEEEhhhcee--eeeecCCcceEEEEEecCc-----ceEEeeeeccceEe
Confidence                              4799999999999999987765  5778999999999988651     68999999999999


Q ss_pred             EEcCCC-cceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEee
Q psy2762         251 WTSNDY-VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       251 w~~~~~-~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      ||+.+. .+  ...+..|...|..+.+  .++.|.+++.|++|++||.++++..+.+..
T Consensus       397 Wdl~~~~~c--~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~  451 (537)
T KOG0274|consen  397 WDLRTKRKC--IHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEG  451 (537)
T ss_pred             ecCCchhhh--hhhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeecc
Confidence            999886 32  3456677777866555  578999999999999999988866665543

>KOG0305|consensus

Probab=99.97  E-value=1.8e-28  Score=221.41  Aligned_cols=245  Identities=20%  Similarity=0.375  Sum_probs=200.3

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-cccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -+.+.|+++.++++|.+|+.|..+|+|.|||...           .+.+.++.+ |...|.+++|.    +..+.+|+.|
T Consensus       215 ~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-----------~k~~~~~~~~h~~rvg~laW~----~~~lssGsr~  279 (484)
T KOG0305|consen  215 FGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-----------QKKTRTLRGSHASRVGSLAWN----SSVLSSGSRD  279 (484)
T ss_pred             cCCCceEEEEECCCCCEEEEeecCCeEEEEehhh-----------ccccccccCCcCceeEEEecc----CceEEEecCC
Confidence            3489999999999999999999999999999863           345777888 99999999995    5789999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      +.|..+|+...+.... .+.+|...|..++|+++  +.++|+|+.|+.+.|||....   ..+..+..|...|..++|+|
T Consensus       280 ~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d--~~~lASGgnDN~~~Iwd~~~~---~p~~~~~~H~aAVKA~awcP  353 (484)
T KOG0305|consen  280 GKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPD--GNQLASGGNDNVVFIWDGLSP---EPKFTFTEHTAAVKALAWCP  353 (484)
T ss_pred             CcEEEEEEecchhhhh-hhhcccceeeeeEECCC--CCeeccCCCccceEeccCCCc---cccEEEeccceeeeEeeeCC
Confidence            9999999887653222 47789999999999999  789999999999999997222   23456678999999999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEe--cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCC
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSG--GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDR  246 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasg--s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~  246 (318)
                      ..                ...||+|  +.|++|++||..++..+.  .. .-...|..|.|++..   +.++.+-| .+.
T Consensus       354 ~q----------------~~lLAsGGGs~D~~i~fwn~~~g~~i~--~v-dtgsQVcsL~Wsk~~---kEi~sthG~s~n  411 (484)
T KOG0305|consen  354 WQ----------------SGLLATGGGSADRCIKFWNTNTGARID--SV-DTGSQVCSLIWSKKY---KELLSTHGYSEN  411 (484)
T ss_pred             Cc----------------cCceEEcCCCcccEEEEEEcCCCcEec--cc-ccCCceeeEEEcCCC---CEEEEecCCCCC
Confidence            74                2457775  679999999998876432  22 344569999999972   34555555 367


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .|.||+.....  ....+.+|..+|..+++||||..+++|+.|.++|+|++-..
T Consensus       412 ~i~lw~~ps~~--~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  412 QITLWKYPSMK--LVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             cEEEEeccccc--eeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            89999986643  34567899999999999999999999999999999987553

>KOG0300|consensus

Probab=99.96  E-value=2.3e-28  Score=203.92  Aligned_cols=252  Identities=23%  Similarity=0.340  Sum_probs=209.0

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      |-+.+.||++.|..++.......+.++|.|.+.+||.++           .+.++.++.||.+.|+++.|. + .+.+++
T Consensus       140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~E-----------sg~CL~~Y~GH~GSVNsikfh-~-s~~L~l  206 (481)
T KOG0300|consen  140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLE-----------SGACLATYTGHTGSVNSIKFH-N-SGLLLL  206 (481)
T ss_pred             ehhhhcccccceeeehhhcCCcceeecccccceeEEeec-----------cccceeeecccccceeeEEec-c-ccceEE
Confidence            445678999999999998888899999999999999997           468999999999999999995 4 589999


Q ss_pred             EEECCCeEEEEeCC------C------------------------------C--cEEEEEEecCCCcCeEEEEeeCCCCC
Q psy2762          85 SCSYDRKVIIWRGD------N------------------------------G--NWFKYYEYNNHDSSVNSIAWAPKEFG  126 (318)
Q Consensus        85 s~s~Dg~v~vWd~~------~------------------------------~--~~~~~~~~~~h~~~v~~v~~~p~~~~  126 (318)
                      ++|.|++..||...      +                              +  -.++...+.+|.+.|.+..|-..  +
T Consensus       207 TaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g--g  284 (481)
T KOG0300|consen  207 TASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG--G  284 (481)
T ss_pred             EccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC--c
Confidence            99999999999621      0                              0  02345567789999999999887  6


Q ss_pred             cEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc
Q psy2762         127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE  206 (318)
Q Consensus       127 ~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~  206 (318)
                      ..+++++.|.+-.+||.+.+.   .+..+.+|....+-++-+|.                 .+.++++|.|.+.|+||++
T Consensus       285 ~Q~vTaSWDRTAnlwDVEtge---~v~~LtGHd~ELtHcstHpt-----------------QrLVvTsSrDtTFRLWDFR  344 (481)
T KOG0300|consen  285 QQMVTASWDRTANLWDVETGE---VVNILTGHDSELTHCSTHPT-----------------QRLVVTSSRDTTFRLWDFR  344 (481)
T ss_pred             ceeeeeeccccceeeeeccCc---eeccccCcchhccccccCCc-----------------ceEEEEeccCceeEeccch
Confidence            789999999999999986553   34556689888777777775                 3678999999999999998


Q ss_pred             CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         207 GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       207 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      .. ......|.||.+.|+++.|..+     ..++|+|+|++|+|||+.+.+.  +.-....+.+++.++.+..++.||.-
T Consensus       345 ea-I~sV~VFQGHtdtVTS~vF~~d-----d~vVSgSDDrTvKvWdLrNMRs--plATIRtdS~~NRvavs~g~~iIAiP  416 (481)
T KOG0300|consen  345 EA-IQSVAVFQGHTDTVTSVVFNTD-----DRVVSGSDDRTVKVWDLRNMRS--PLATIRTDSPANRVAVSKGHPIIAIP  416 (481)
T ss_pred             hh-cceeeeecccccceeEEEEecC-----CceeecCCCceEEEeeeccccC--cceeeecCCccceeEeecCCceEEec
Confidence            53 2345678999999999999974     5799999999999999998763  22222346789999999888899999


Q ss_pred             eCCCeEEEEEECC
Q psy2762         287 CGDNSVSLWKENT  299 (318)
Q Consensus       287 ~~D~~v~iW~~~~  299 (318)
                      -+++.|||+|++-
T Consensus       417 hDNRqvRlfDlnG  429 (481)
T KOG0300|consen  417 HDNRQVRLFDLNG  429 (481)
T ss_pred             cCCceEEEEecCC
Confidence            9999999999765

>KOG0294|consensus

Probab=99.96  E-value=5.5e-28  Score=201.27  Aligned_cols=244  Identities=17%  Similarity=0.297  Sum_probs=192.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+..|.+++++++.  +|.|+||||.|-+|+|||+.           ..+.+..+-.|.+.|+++.|.+|.....|+||+
T Consensus        38 ~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~-----------k~~qlg~ll~HagsitaL~F~~~~S~shLlS~s  104 (362)
T KOG0294|consen   38 AFSAHAGSITALAV--SGPYVASGSSDETIHIYDMR-----------KRKQLGILLSHAGSITALKFYPPLSKSHLLSGS  104 (362)
T ss_pred             cccccccceeEEEe--cceeEeccCCCCcEEEEecc-----------chhhhcceeccccceEEEEecCCcchhheeeec
Confidence            35789999999988  78999999999999999996           345678888999999999999875455899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .||.|.+|+..  .|...-.+.+|.+.|+.|+.+|.  +++.++.+.|+.+++|++..+.... ...+. +  .-.-+.|
T Consensus       105 dDG~i~iw~~~--~W~~~~slK~H~~~Vt~lsiHPS--~KLALsVg~D~~lr~WNLV~Gr~a~-v~~L~-~--~at~v~w  176 (362)
T KOG0294|consen  105 DDGHIIIWRVG--SWELLKSLKAHKGQVTDLSIHPS--GKLALSVGGDQVLRTWNLVRGRVAF-VLNLK-N--KATLVSW  176 (362)
T ss_pred             CCCcEEEEEcC--CeEEeeeecccccccceeEecCC--CceEEEEcCCceeeeehhhcCccce-eeccC-C--cceeeEE
Confidence            99999999865  57777788899999999999998  7899999999999999987765432 12222 1  1233889


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|.                 |.+|+.++.+ .|-||.+++.......+.+   ..+.++.|-.     +..|++|++|+.
T Consensus       177 ~~~-----------------Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~---~r~l~~~~l~-----~~~L~vG~d~~~  230 (362)
T KOG0294|consen  177 SPQ-----------------GDHFVVSGRN-KIDIYQLDNASVFREIENP---KRILCATFLD-----GSELLVGGDNEW  230 (362)
T ss_pred             cCC-----------------CCEEEEEecc-EEEEEecccHhHhhhhhcc---ccceeeeecC-----CceEEEecCCce
Confidence            986                 4678877775 6889987764322111111   3356666654     678999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEE--cCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSW--SLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~--spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      |++||.....  .+..+..|+.+|.++.+  .|++.+|+|+|.||.|++||++..
T Consensus       231 i~~~D~ds~~--~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  231 ISLKDTDSDT--PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             EEEeccCCCc--cceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            9999987643  24456689999999884  367899999999999999998664

>KOG0296|consensus

Probab=99.96  E-value=2.1e-27  Score=201.15  Aligned_cols=260  Identities=19%  Similarity=0.262  Sum_probs=191.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..+||++.|+++.|+.+|.|||||..+|.|+||++.+           +.....+..-...+-=+.| || .+..|+.|+
T Consensus       101 eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st-----------g~~~~~~~~e~~dieWl~W-Hp-~a~illAG~  167 (399)
T KOG0296|consen  101 ELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST-----------GGEQWKLDQEVEDIEWLKW-HP-RAHILLAGS  167 (399)
T ss_pred             EecCCCCceEEEEEccCceEEEecCCCccEEEEEccc-----------CceEEEeecccCceEEEEe-cc-cccEEEeec
Confidence            4579999999999999999999999999999999863           3333444333344555677 66 589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---ccccccce
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AHTIGCNA  164 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h~~~v~~  164 (318)
                      .||.+=.|.+.+..  ....+.+|..++++=.|.|+  +++++++..||+|++|++......   ..+.   +...++..
T Consensus       168 ~DGsvWmw~ip~~~--~~kv~~Gh~~~ct~G~f~pd--GKr~~tgy~dgti~~Wn~ktg~p~---~~~~~~e~~~~~~~~  240 (399)
T KOG0296|consen  168 TDGSVWMWQIPSQA--LCKVMSGHNSPCTCGEFIPD--GKRILTGYDDGTIIVWNPKTGQPL---HKITQAEGLELPCIS  240 (399)
T ss_pred             CCCcEEEEECCCcc--eeeEecCCCCCcccccccCC--CceEEEEecCceEEEEecCCCcee---EEecccccCcCCccc
Confidence            99999999998754  33457799999999999999  889999999999999998655421   1111   00001110


Q ss_pred             e--------------------------eeCCC--CCCCc------cccccCCCCCCccceEEEecCCCeEEEEEccCCeE
Q psy2762         165 V--------------------------SWGPG--IGSLS------ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW  210 (318)
Q Consensus       165 ~--------------------------~~~p~--~~~~~------~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~  210 (318)
                      +                          .++.+  ...+.      ...++..++.......|+|+-||+|-|||+....+
T Consensus       241 ~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~  320 (399)
T KOG0296|consen  241 LNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTL  320 (399)
T ss_pred             cccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchh
Confidence            0                          00000  00000      00011112222234689999999999999876542


Q ss_pred             EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         211 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       211 ~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                         .....|...|..+.|-++     .+|++++.||+|+.||.+.+.  ......+|+..|..++++|++++++++|.|+
T Consensus       321 ---R~~c~he~~V~~l~w~~t-----~~l~t~c~~g~v~~wDaRtG~--l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~  390 (399)
T KOG0296|consen  321 ---RHICEHEDGVTKLKWLNT-----DYLLTACANGKVRQWDARTGQ--LKFTYTGHQMGILDFALSPQKRLVVTVSDDN  390 (399)
T ss_pred             ---heeccCCCceEEEEEcCc-----chheeeccCceEEeeeccccc--eEEEEecCchheeEEEEcCCCcEEEEecCCC
Confidence               233568889999999883     579999999999999998865  3456679999999999999999999999999


Q ss_pred             eEEEEEE
Q psy2762         291 SVSLWKE  297 (318)
Q Consensus       291 ~v~iW~~  297 (318)
                      +.++++.
T Consensus       391 ~a~VF~v  397 (399)
T KOG0296|consen  391 TALVFEV  397 (399)
T ss_pred             eEEEEec
Confidence            9999974

>KOG0308|consensus

Probab=99.96  E-value=6.4e-29  Score=223.76  Aligned_cols=255  Identities=19%  Similarity=0.262  Sum_probs=198.0

Q ss_pred             CCcceee---eeeec-CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762          11 GHEDMIH---DAEMD-YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        11 gH~~~v~---~~~~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .|...|.   .+..+ |.++||+|||.||.|++|+....-.   ..  ....+.+++.|+++|+.+...+  +++.|+|+
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~---~~--s~~~~asme~HsDWVNDiiL~~--~~~tlIS~   91 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSN---EP--STPYIASMEHHSDWVNDIILCG--NGKTLISA   91 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccC---Cc--ccchhhhhhhhHhHHhhHHhhc--CCCceEEe
Confidence            4555555   45554 5678899999999999999862200   00  0113678899999999998764  58899999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe-eCCCCCcEEEEeecCCeEEEEEeecCCC-------Ccceeeec-c
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW-APKEFGLILACGSSDGTISFLTYMSDTN-------SWESRKIA-A  157 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~~~lasgs~d~~i~i~~~~~~~~-------~~~~~~~~-~  157 (318)
                      |.|-+|++|++......+..++..|...|.|++. .++  ..++|+|+.|+.|.+||+.....       ......+. +
T Consensus        92 SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~--~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG  169 (735)
T KOG0308|consen   92 SSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKN--NELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSG  169 (735)
T ss_pred             cCCceEEEeecccCcchhHhhhhcccchheeeeecccC--ceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCC
Confidence            9999999999876543455567789999999999 555  67899999999999999865421       11111222 5


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      +..++.+++-.+.                 +..|++|+..+.||+||.++++  ....+.||++.|++|..+++    |+
T Consensus       170 ~k~siYSLA~N~t-----------------~t~ivsGgtek~lr~wDprt~~--kimkLrGHTdNVr~ll~~dD----Gt  226 (735)
T KOG0308|consen  170 PKDSIYSLAMNQT-----------------GTIIVSGGTEKDLRLWDPRTCK--KIMKLRGHTDNVRVLLVNDD----GT  226 (735)
T ss_pred             CccceeeeecCCc-----------------ceEEEecCcccceEEecccccc--ceeeeeccccceEEEEEcCC----CC
Confidence            5556666665553                 4679999999999999988774  45667899999999999996    89


Q ss_pred             EEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         238 MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .++|+|.|++||+||+...++.  .....|.+.||++.-+|+=+.+.+|++||.|..=++..
T Consensus       227 ~~ls~sSDgtIrlWdLgqQrCl--~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n  286 (735)
T KOG0308|consen  227 RLLSASSDGTIRLWDLGQQRCL--ATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN  286 (735)
T ss_pred             eEeecCCCceEEeeecccccee--eeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCC
Confidence            9999999999999999876653  34667888899999999999999999999887666554

>KOG0288|consensus

Probab=99.96  E-value=6.9e-29  Score=213.07  Aligned_cols=244  Identities=19%  Similarity=0.243  Sum_probs=191.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.|-.++|++++|.+++.++++.+.|+.+++|+++.           ..+..+|.||++.|+++.|..  ....++||+
T Consensus       214 tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~-----------~r~~~TLsGHtdkVt~ak~~~--~~~~vVsgs  280 (459)
T KOG0288|consen  214 TLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDS-----------LRLRHTLSGHTDKVTAAKFKL--SHSRVVSGS  280 (459)
T ss_pred             hhhccCCCcceeeecCCCceEEeecCCCceeeeeccc-----------hhhhhhhcccccceeeehhhc--cccceeecc
Confidence            4567788999999999999999999999999999973           356789999999999999963  234499999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|.+||+||+....+...  + ...+.++.|..++.    .+++|..|+.|++||.+....   ...+..+ +.|.++..
T Consensus       281 ~DRtiK~WDl~k~~C~kt--~-l~~S~cnDI~~~~~----~~~SgH~DkkvRfwD~Rs~~~---~~sv~~g-g~vtSl~l  349 (459)
T KOG0288|consen  281 ADRTIKLWDLQKAYCSKT--V-LPGSQCNDIVCSIS----DVISGHFDKKVRFWDIRSADK---TRSVPLG-GRVTSLDL  349 (459)
T ss_pred             ccchhhhhhhhhhheecc--c-cccccccceEecce----eeeecccccceEEEeccCCce---eeEeecC-cceeeEee
Confidence            999999999998654332  2 24577888888743    588999999999999865542   2233333 37888888


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC--CCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH--SDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +++                 +..|.+++.|.++++.|+.+.+........+.  ....+.+.|||+    +.|+++||.|
T Consensus       350 s~~-----------------g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd----~~YvaAGS~d  408 (459)
T KOG0288|consen  350 SMD-----------------GLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPD----GSYVAAGSAD  408 (459)
T ss_pred             ccC-----------------CeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCC----CceeeeccCC
Confidence            876                 46788889999999999998765544443332  223789999996    8899999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      |.|+||++.+..........+-...|.+++|+|.|..|++++.++.+++|.
T Consensus       409 gsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  409 GSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             CcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            999999998765322111222233799999999999999999999999993

>KOG0306|consensus

Probab=99.96  E-value=6.6e-28  Score=220.32  Aligned_cols=258  Identities=21%  Similarity=0.362  Sum_probs=201.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC-----CCC--------------CCCcc----------eE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-----DDS--------------HSQKG----------TL   58 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-----~~~--------------~~~~~----------~~   58 (318)
                      ...||...|++++|+.+...++||+ .+.++||+.....-.     .+.              ..++|          .+
T Consensus       368 ~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l  446 (888)
T KOG0306|consen  368 EIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASL  446 (888)
T ss_pred             eeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhh
Confidence            3468999999999998888888876 568899987732100     000              01122          22


Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-----CcEEE------EEEecCCCcCeEEEEeeCCCCCc
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-----GNWFK------YYEYNNHDSSVNSIAWAPKEFGL  127 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-----~~~~~------~~~~~~h~~~v~~v~~~p~~~~~  127 (318)
                      +.+.++|.+.||.++.+|  |+..+++||.|.+|++||...     +....      ..++ .-+..|.|++++||  +.
T Consensus       447 ~Eti~AHdgaIWsi~~~p--D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL-el~ddvL~v~~Spd--gk  521 (888)
T KOG0306|consen  447 VETIRAHDGAIWSISLSP--DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL-ELEDDVLCVSVSPD--GK  521 (888)
T ss_pred             hhhhhccccceeeeeecC--CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE-eccccEEEEEEcCC--Cc
Confidence            456779999999999864  589999999999999998632     11111      1122 23578999999999  78


Q ss_pred             EEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC
Q psy2762         128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG  207 (318)
Q Consensus       128 ~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~  207 (318)
                      ++|.+--|.+|++|-...-+  + ...+-||.-||.++..+|+                 ++.++|||.|++|+||=++-
T Consensus       522 ~LaVsLLdnTVkVyflDtlK--F-flsLYGHkLPV~smDIS~D-----------------SklivTgSADKnVKiWGLdF  581 (888)
T KOG0306|consen  522 LLAVSLLDNTVKVYFLDTLK--F-FLSLYGHKLPVLSMDISPD-----------------SKLIVTGSADKNVKIWGLDF  581 (888)
T ss_pred             EEEEEeccCeEEEEEeccee--e-eeeecccccceeEEeccCC-----------------cCeEEeccCCCceEEecccc
Confidence            99999999999998663221  0 1223499999999999997                 57899999999999998877


Q ss_pred             CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe
Q psy2762         208 DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       208 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      +.|  ...+.+|.+.|.+|.|-|.    ...+.++|.|+.|+-||.++..  ....+.+|...||.++.+|+|.+++|+|
T Consensus       582 GDC--HKS~fAHdDSvm~V~F~P~----~~~FFt~gKD~kvKqWDg~kFe--~iq~L~~H~~ev~cLav~~~G~~vvs~s  653 (888)
T KOG0306|consen  582 GDC--HKSFFAHDDSVMSVQFLPK----THLFFTCGKDGKVKQWDGEKFE--EIQKLDGHHSEVWCLAVSPNGSFVVSSS  653 (888)
T ss_pred             chh--hhhhhcccCceeEEEEccc----ceeEEEecCcceEEeechhhhh--hheeeccchheeeeeEEcCCCCeEEecc
Confidence            764  4567899999999999996    6789999999999999987643  3456788999999999999999999999


Q ss_pred             CCCeEEEEEECC
Q psy2762         288 GDNSVSLWKENT  299 (318)
Q Consensus       288 ~D~~v~iW~~~~  299 (318)
                      .|.++|+|....
T Consensus       654 hD~sIRlwE~td  665 (888)
T KOG0306|consen  654 HDKSIRLWERTD  665 (888)
T ss_pred             CCceeEeeeccC
Confidence            999999998544

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=7.7e-27  Score=218.24  Aligned_cols=259  Identities=17%  Similarity=0.215  Sum_probs=178.6

Q ss_pred             ecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ...||.+.|.+++|+|+ +.+|+|||.|++|+|||+......   .......+..+.+|.+.|.+++|+ |....+|+|+
T Consensus        69 ~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~---~~~i~~p~~~L~gH~~~V~sVaf~-P~g~~iLaSg  144 (568)
T PTZ00420         69 KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDES---VKEIKDPQCILKGHKKKISIIDWN-PMNYYIMCSS  144 (568)
T ss_pred             EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcc---ccccccceEEeecCCCcEEEEEEC-CCCCeEEEEE
Confidence            45799999999999997 799999999999999998632100   000012356788999999999996 4333467899


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|++|+|||+.++...  ..+. |...|.+++|+|+  +.++++++.|+.|+|||++...   .+..+.+|...+....
T Consensus       145 S~DgtIrIWDl~tg~~~--~~i~-~~~~V~Slswspd--G~lLat~s~D~~IrIwD~Rsg~---~i~tl~gH~g~~~s~~  216 (568)
T PTZ00420        145 GFDSFVNIWDIENEKRA--FQIN-MPKKLSSLKWNIK--GNLLSGTCVGKHMHIIDPRKQE---IASSFHIHDGGKNTKN  216 (568)
T ss_pred             eCCCeEEEEECCCCcEE--EEEe-cCCcEEEEEECCC--CCEEEEEecCCEEEEEECCCCc---EEEEEecccCCceeEE
Confidence            99999999999887633  3343 5678999999998  7789999999999999986543   2345667876553322


Q ss_pred             -----eCCCCCCCccccccCCCCCCccceEEEecCCC----eEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         167 -----WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----LIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       167 -----~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                           |+++                 +.+|++++.|+    .|+|||++. .++.....+..+...+... |.++   .+
T Consensus       217 v~~~~fs~d-----------------~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~-~D~~---tg  275 (568)
T PTZ00420        217 IWIDGLGGD-----------------DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPH-YDES---TG  275 (568)
T ss_pred             EEeeeEcCC-----------------CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEe-eeCC---CC
Confidence                 3343                 35788877664    799999884 3444344444444443333 3343   48


Q ss_pred             cEEEEEeCCCeEEEEEcCCCcceeeEEe--eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         237 CMIASCSQDRKVIIWTSNDYVTWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       237 ~~l~s~s~D~~i~vw~~~~~~~~~~~~~--~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      .++++|+.|++||+|++....   ...+  ..+..++..++|.|+..+=+..+  -..|++.+...+..+
T Consensus       276 ~l~lsGkGD~tIr~~e~~~~~---~~~l~~~~s~~p~~g~~f~Pkr~~dv~~c--Ei~R~~kl~~~~~i~  340 (568)
T PTZ00420        276 LIYLIGKGDGNCRYYQHSLGS---IRKVNEYKSCSPFRSFGFLPKQICDVYKC--EIGRVYKNENNSSIR  340 (568)
T ss_pred             CEEEEEECCCeEEEEEccCCc---EEeecccccCCCccceEEccccccCchhh--hHhHHhhhcCCCeEE
Confidence            899999999999999986542   1222  23457888999999854322222  245666654333333

>KOG0289|consensus

Probab=99.96  E-value=2.5e-27  Score=204.70  Aligned_cols=256  Identities=19%  Similarity=0.325  Sum_probs=203.5

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...+.++...|....+++|+.|+++.++|..           ....+.+|+||+..|+.+.|. + +...+++++.|..|
T Consensus       219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~-----------s~q~l~~~~Gh~kki~~v~~~-~-~~~~v~~aSad~~i  285 (506)
T KOG0289|consen  219 TPGITALDIIPSSSKILTGGEDKTAVLFDKP-----------SNQILATLKGHTKKITSVKFH-K-DLDTVITASADEII  285 (506)
T ss_pred             CCCeeEEeecCCCCcceecCCCCceEEEecc-----------hhhhhhhccCcceEEEEEEec-c-chhheeecCCcceE
Confidence            3467777777777889999999999999986           345788999999999999985 3 57889999999999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccccceeeeCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPG  170 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~  170 (318)
                      +||......  .......|.++|+.+..+|.  +.|+++++.|+++.+.|+..+..   .....  .....+.+.+|+|+
T Consensus       286 ~vws~~~~s--~~~~~~~h~~~V~~ls~h~t--geYllsAs~d~~w~Fsd~~~g~~---lt~vs~~~s~v~~ts~~fHpD  358 (506)
T KOG0289|consen  286 RVWSVPLSS--EPTSSRPHEEPVTGLSLHPT--GEYLLSASNDGTWAFSDISSGSQ---LTVVSDETSDVEYTSAAFHPD  358 (506)
T ss_pred             Eeecccccc--CccccccccccceeeeeccC--CcEEEEecCCceEEEEEccCCcE---EEEEeeccccceeEEeeEcCC
Confidence            999866544  23345679999999999998  78999999999999988866642   11111  22334688999998


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       |..|++|..|+.|+|||+....  ....|.+|.++|+.|+|+-+    |++||++++|+.|++
T Consensus       359 -----------------gLifgtgt~d~~vkiwdlks~~--~~a~Fpght~~vk~i~FsEN----GY~Lat~add~~V~l  415 (506)
T KOG0289|consen  359 -----------------GLIFGTGTPDGVVKIWDLKSQT--NVAKFPGHTGPVKAISFSEN----GYWLATAADDGSVKL  415 (506)
T ss_pred             -----------------ceEEeccCCCceEEEEEcCCcc--ccccCCCCCCceeEEEeccC----ceEEEEEecCCeEEE
Confidence                             5789999999999999998764  56789999999999999985    999999999999999


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecccc
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS  313 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~  313 (318)
                      ||+++........+... ..|.++.|.+.|++|+.+|.|=.|.+.+ .....|.++.++..-+
T Consensus       416 wDLRKl~n~kt~~l~~~-~~v~s~~fD~SGt~L~~~g~~l~Vy~~~-k~~k~W~~~~~~~~~s  476 (506)
T KOG0289|consen  416 WDLRKLKNFKTIQLDEK-KEVNSLSFDQSGTYLGIAGSDLQVYICK-KKTKSWTEIKELADHS  476 (506)
T ss_pred             EEehhhcccceeecccc-ccceeEEEcCCCCeEEeecceeEEEEEe-cccccceeeehhhhcc
Confidence            99987543222222222 3699999999999999997765555554 3456899998876554

>KOG0301|consensus

Probab=99.96  E-value=2.4e-27  Score=215.00  Aligned_cols=235  Identities=24%  Similarity=0.370  Sum_probs=188.4

Q ss_pred             cCCCcceeee-eeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           9 DTGHEDMIHD-AEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         9 ~~gH~~~v~~-~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ..+|.+.|.. +++.+ ++-+|++|+.|.+|.+|.+.           ...++.+|++|...|.+++-.  .++. |+||
T Consensus        53 ~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~-----------~~~P~~~LkgH~snVC~ls~~--~~~~-~iSg  118 (745)
T KOG0301|consen   53 FEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLS-----------QAEPLYTLKGHKSNVCSLSIG--EDGT-LISG  118 (745)
T ss_pred             cccCcceeeccceeccccCcceEeecccceEEEEecC-----------CCCchhhhhccccceeeeecC--CcCc-eEec
Confidence            3467777777 77764 55569999999999999986           346789999999999999853  3355 9999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      |+|.|+++|.+..    ....+.+|+..|.+++.-|.  + .+++|+.|++|++|.-  +   ...+.+.+|+..|..++
T Consensus       119 SWD~TakvW~~~~----l~~~l~gH~asVWAv~~l~e--~-~~vTgsaDKtIklWk~--~---~~l~tf~gHtD~VRgL~  186 (745)
T KOG0301|consen  119 SWDSTAKVWRIGE----LVYSLQGHTASVWAVASLPE--N-TYVTGSADKTIKLWKG--G---TLLKTFSGHTDCVRGLA  186 (745)
T ss_pred             ccccceEEecchh----hhcccCCcchheeeeeecCC--C-cEEeccCcceeeeccC--C---chhhhhccchhheeeeE
Confidence            9999999997653    33457899999999999997  4 6889999999999963  2   23566779999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      .-|+                  ..|++++.||.||+|++.+ ++  ..++.+|+..|++++..++    ...++|+|+|+
T Consensus       187 vl~~------------------~~flScsNDg~Ir~w~~~g-e~--l~~~~ghtn~vYsis~~~~----~~~Ivs~gEDr  241 (745)
T KOG0301|consen  187 VLDD------------------SHFLSCSNDGSIRLWDLDG-EV--LLEMHGHTNFVYSISMALS----DGLIVSTGEDR  241 (745)
T ss_pred             EecC------------------CCeEeecCCceEEEEeccC-ce--eeeeeccceEEEEEEecCC----CCeEEEecCCc
Confidence            8774                  3699999999999999954 33  4567899999999996664    77999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++|||+...  +.+...+  ...-||++.+-++|..+ +|+.||.||||..+.
T Consensus       242 tlriW~~~e--~~q~I~l--PttsiWsa~~L~NgDIv-vg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  242 TLRIWKKDE--CVQVITL--PTTSIWSAKVLLNGDIV-VGGSDGRVRVFTVDK  289 (745)
T ss_pred             eEEEeecCc--eEEEEec--CccceEEEEEeeCCCEE-EeccCceEEEEEecc
Confidence            999998762  2222222  23479999999999765 788999999998654

>KOG0299|consensus

Probab=99.96  E-value=3.5e-27  Score=205.11  Aligned_cols=235  Identities=22%  Similarity=0.297  Sum_probs=183.6

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|...+.++++++||+||++|+.|..|.||+..           +.+.+.++++|.+.|.+++|..  ....|+|+|.|
T Consensus       199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~-----------t~ehv~~~~ghr~~V~~L~fr~--gt~~lys~s~D  265 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCD-----------TLEHVKVFKGHRGAVSSLAFRK--GTSELYSASAD  265 (479)
T ss_pred             ccccceeEEEEEcCCCcEEEecCCCceEEEecCc-----------ccchhhcccccccceeeeeeec--CccceeeeecC
Confidence            4899999999999999999999999999999986           3467888999999999999952  36789999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      ++|++|+++.-..  +-++-+|.+.|..|....-  +..+..|+.|.++++|++....    .....+|...+-+++|-.
T Consensus       266 rsvkvw~~~~~s~--vetlyGHqd~v~~IdaL~r--eR~vtVGgrDrT~rlwKi~ees----qlifrg~~~sidcv~~In  337 (479)
T KOG0299|consen  266 RSVKVWSIDQLSY--VETLYGHQDGVLGIDALSR--ERCVTVGGRDRTVRLWKIPEES----QLIFRGGEGSIDCVAFIN  337 (479)
T ss_pred             CceEEEehhHhHH--HHHHhCCccceeeechhcc--cceEEeccccceeEEEeccccc----eeeeeCCCCCeeeEEEec
Confidence            9999999875442  2245689999999987765  6677778899999999983221    122337777777888765


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc-----c-----cCCCCeeEEEEccCCCCCccEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-----E-----NHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~-----~-----~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      +                  .+|++||.||.|.+|.+..++++.....     +     +++.||++|+-.|.    ..++
T Consensus       338 ~------------------~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~----sdL~  395 (479)
T KOG0299|consen  338 D------------------EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPG----SDLL  395 (479)
T ss_pred             c------------------cceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEeccc----CceE
Confidence            3                  5799999999999999887654333221     1     23349999999994    7899


Q ss_pred             EEEeCCCeEEEEEcCCCcc-eeeEEeeecCCcEEEEEEcCCCCEEEEEe
Q psy2762         240 ASCSQDRKVIIWTSNDYVT-WTPFIMNTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~-~~~~~~~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      ||||.+|.||+|...+... ..+...-...+.|++++|+++|+.|++|.
T Consensus       396 asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagi  444 (479)
T KOG0299|consen  396 ASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGI  444 (479)
T ss_pred             EecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEec
Confidence            9999999999999877532 11212223668899999999999766553

>KOG0289|consensus

Probab=99.96  E-value=1.1e-26  Score=200.80  Aligned_cols=250  Identities=21%  Similarity=0.284  Sum_probs=200.6

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .++.||...|+.+.|+|+...+++++.|..|+||.....           ........|..+|+.+.. || .|+||+++
T Consensus       255 ~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~-----------s~~~~~~~h~~~V~~ls~-h~-tgeYllsA  321 (506)
T KOG0289|consen  255 ATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS-----------SEPTSSRPHEEPVTGLSL-HP-TGEYLLSA  321 (506)
T ss_pred             hhccCcceEEEEEEeccchhheeecCCcceEEeeccccc-----------cCccccccccccceeeee-cc-CCcEEEEe
Confidence            466899999999999999999999999999999987522           123456789999999996 65 59999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|+++...|++++.......-+.-.-.+.+.+|+||  +.++.+|+.|+.|+|||+....   ...++.+|+.+|..++
T Consensus       322 s~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD--gLifgtgt~d~~vkiwdlks~~---~~a~Fpght~~vk~i~  396 (506)
T KOG0289|consen  322 SNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD--GLIFGTGTPDGVVKIWDLKSQT---NVAKFPGHTGPVKAIS  396 (506)
T ss_pred             cCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC--ceEEeccCCCceEEEEEcCCcc---ccccCCCCCCceeEEE
Confidence            9999999999998865443322222235899999999  8999999999999999986654   3456778999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+-+                 |++||++.+|+.|++||++..+-.+...+... ..|.+++|.+.    |++|+.+|.|=
T Consensus       397 FsEN-----------------GY~Lat~add~~V~lwDLRKl~n~kt~~l~~~-~~v~s~~fD~S----Gt~L~~~g~~l  454 (506)
T KOG0289|consen  397 FSEN-----------------GYWLATAADDGSVKLWDLRKLKNFKTIQLDEK-KEVNSLSFDQS----GTYLGIAGSDL  454 (506)
T ss_pred             eccC-----------------ceEEEEEecCCeEEEEEehhhcccceeecccc-ccceeEEEcCC----CCeEEeeccee
Confidence            9975                 78999999999999999886543344444333 36999999995    89999998888


Q ss_pred             eEEEEEcCCCccee-eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         247 KVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       247 ~i~vw~~~~~~~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +|.+++-.+. .|+ ...+..|.+....|.|.-+.++|+++|-|..+|++.+
T Consensus       455 ~Vy~~~k~~k-~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  455 QVYICKKKTK-SWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             EEEEEecccc-cceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            7777764443 243 2334456678889999999999999999999998753

>KOG0264|consensus

Probab=99.96  E-value=1.4e-27  Score=207.34  Aligned_cols=222  Identities=25%  Similarity=0.371  Sum_probs=179.3

Q ss_pred             eecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      +.+.||++.=+.+.|++.. -+|++++.|++|++||++....  +  +..-.....+.+|.+.|..++| ++.+..+|+|
T Consensus       171 l~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~--~--~~~~~p~~~~~~h~~~VeDV~~-h~~h~~lF~s  245 (422)
T KOG0264|consen  171 LRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESK--E--DKVVDPKTIFSGHEDVVEDVAW-HPLHEDLFGS  245 (422)
T ss_pred             eEEEeecccccccccccccceeEeeccCCCcEEEEecccccc--C--CccccceEEeecCCcceehhhc-cccchhhhee
Confidence            4567999988889998753 4799999999999999973210  0  1111235668899999999999 5678899999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      ++.|+.+.|||.++..........+|.+.|+|++|+|-. +.+||+||.|++|.+||+++...  .+..+.+|...|..|
T Consensus       246 v~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~-~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V  322 (422)
T KOG0264|consen  246 VGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFN-EFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQV  322 (422)
T ss_pred             ecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCC-CceEEeccCCCcEEEeechhccc--CceeccCCCcceEEE
Confidence            999999999999853222344567899999999999975 78999999999999999976653  456777999999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC------------CeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG------------DKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~------------~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                      .|+|..                ...||+++.|+.+.|||+..            +++...+.-.||+..|..++|+|.  
T Consensus       323 ~WSPh~----------------etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~--  384 (422)
T KOG0264|consen  323 EWSPHN----------------ETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPN--  384 (422)
T ss_pred             EeCCCC----------------CceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCC--
Confidence            999975                35799999999999999753            122234556799999999999997  


Q ss_pred             CCccEEEEEeCCCeEEEEEcCC
Q psy2762         234 LSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                       ....|+|+++|+.++||....
T Consensus       385 -ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  385 -EPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             -CCeEEEEecCCceEEEeeccc
Confidence             678999999999999997653

>KOG0641|consensus

Probab=99.95  E-value=1.9e-25  Score=178.57  Aligned_cols=255  Identities=23%  Similarity=0.362  Sum_probs=194.0

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCC--CCCcEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHP--QFGTLL   83 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~--~~~~~l   83 (318)
                      ++...-|++.|+|.+|+|+|.+|++||.|++|++.-.+..     .....| ....+.-|.+.|..++|..+  ..+.+|
T Consensus        82 ~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~d-----t~~~~g-~dle~nmhdgtirdl~fld~~~s~~~il  155 (350)
T KOG0641|consen   82 CKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNAD-----TCNATG-HDLEFNMHDGTIRDLAFLDDPESGGAIL  155 (350)
T ss_pred             eeeccccCccEEEEEecCccCeEEecCCCceEEEEecccc-----cccccC-cceeeeecCCceeeeEEecCCCcCceEE
Confidence            4455679999999999999999999999999999876521     001111 13457789999999999632  235678


Q ss_pred             EEEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEE-EeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccc
Q psy2762          84 ASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSI-AWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHT  159 (318)
Q Consensus        84 as~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~  159 (318)
                      +|++. |..|.+=|-..++  ....+.+|++.|.++ +|+    +-.+++|+.|.+|++||++-+.   .+..+.  -|.
T Consensus       156 ~s~gagdc~iy~tdc~~g~--~~~a~sghtghilalyswn----~~m~~sgsqdktirfwdlrv~~---~v~~l~~~~~~  226 (350)
T KOG0641|consen  156 ASAGAGDCKIYITDCGRGQ--GFHALSGHTGHILALYSWN----GAMFASGSQDKTIRFWDLRVNS---CVNTLDNDFHD  226 (350)
T ss_pred             EecCCCcceEEEeecCCCC--cceeecCCcccEEEEEEec----CcEEEccCCCceEEEEeeeccc---eeeeccCcccC
Confidence            88654 5556665666664  344677999999876 455    5689999999999999986543   122221  122


Q ss_pred             -----cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC
Q psy2762         160 -----IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       160 -----~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                           ..|..++..|.                 +..|++|-.|...-+||.+.+..  .+.+-.|...|+||.|||.   
T Consensus       227 ~glessavaav~vdps-----------------grll~sg~~dssc~lydirg~r~--iq~f~phsadir~vrfsp~---  284 (350)
T KOG0641|consen  227 GGLESSAVAAVAVDPS-----------------GRLLASGHADSSCMLYDIRGGRM--IQRFHPHSADIRCVRFSPG---  284 (350)
T ss_pred             CCcccceeEEEEECCC-----------------cceeeeccCCCceEEEEeeCCce--eeeeCCCccceeEEEeCCC---
Confidence                 34566777775                 67899999999999999998864  4667789999999999995   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcc--eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~--~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                       ..++.++|.|..|++=|+++...  ..+.....|.+.+..+.|+|..-.+.+.+.|+++.+|.++
T Consensus       285 -a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  285 -AHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             -ceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence             78999999999999999987542  2223345678888899999999889999999999999754

>KOG0269|consensus

Probab=99.95  E-value=7.4e-28  Score=220.66  Aligned_cols=243  Identities=20%  Similarity=0.347  Sum_probs=193.4

Q ss_pred             eeeec-CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          18 DAEMD-YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        18 ~~~~~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      .++++ -+.++||+|+..|.|.+||++..        ...+++..|..|...|.++.|. +....+|+|||.||+||+||
T Consensus        92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~--------~rnk~l~~f~EH~Rs~~~ldfh-~tep~iliSGSQDg~vK~~D  162 (839)
T KOG0269|consen   92 DVKWGQLYSNLIATCSTNGVISVWDLNKS--------IRNKLLTVFNEHERSANKLDFH-STEPNILISGSQDGTVKCWD  162 (839)
T ss_pred             hcccccchhhhheeecCCCcEEEEecCcc--------ccchhhhHhhhhccceeeeeec-cCCccEEEecCCCceEEEEe
Confidence            35564 36789999999999999999843        1245677899999999999994 56799999999999999999


Q ss_pred             CCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcc
Q psy2762          97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE  176 (318)
Q Consensus        97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~  176 (318)
                      ++..+...  .+.+-...|..|.|+|.. +..++++...|.+.+||++..+.  ...++.+|.++|.++.|+|+      
T Consensus       163 lR~~~S~~--t~~~nSESiRDV~fsp~~-~~~F~s~~dsG~lqlWDlRqp~r--~~~k~~AH~GpV~c~nwhPn------  231 (839)
T KOG0269|consen  163 LRSKKSKS--TFRSNSESIRDVKFSPGY-GNKFASIHDSGYLQLWDLRQPDR--CEKKLTAHNGPVLCLNWHPN------  231 (839)
T ss_pred             eecccccc--cccccchhhhceeeccCC-CceEEEecCCceEEEeeccCchh--HHHHhhcccCceEEEeecCC------
Confidence            98765333  445567789999999975 67899999999999999976543  23466799999999999996      


Q ss_pred             ccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC--CCeEEEEEcC
Q psy2762         177 LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ--DRKVIIWTSN  254 (318)
Q Consensus       177 ~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~--D~~i~vw~~~  254 (318)
                                 ..+|||||.|++|+|||+.+....+..++ .-..+|.+|.|=|+.   ..+||+++.  |..|+|||+.
T Consensus       232 -----------r~~lATGGRDK~vkiWd~t~~~~~~~~tI-nTiapv~rVkWRP~~---~~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  232 -----------REWLATGGRDKMVKIWDMTDSRAKPKHTI-NTIAPVGRVKWRPAR---SYHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             -----------CceeeecCCCccEEEEeccCCCccceeEE-eecceeeeeeeccCc---cchhhhhhccccceEEEEeec
Confidence                       46999999999999999986654444443 245779999999983   578999985  8999999997


Q ss_pred             CCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Q psy2762         255 DYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       255 ~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~  296 (318)
                      .+- -+-..+..|+..|..++|-- |-..|.+++.|++|-.-.
T Consensus       297 RPY-IP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~  338 (839)
T KOG0269|consen  297 RPY-IPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHL  338 (839)
T ss_pred             ccc-ccceeeeccCccccceeccCCCceeeEeecCccHHHHhh
Confidence            632 12234567888999999975 456788899999875543

>KOG0302|consensus

Probab=99.95  E-value=1.1e-26  Score=197.73  Aligned_cols=264  Identities=22%  Similarity=0.399  Sum_probs=203.6

Q ss_pred             cCCCcceeeeeeecCCC--CEEEEeeCCCcEEEEEcCCCcCCCCC-----CCCcceEEEEecccccCeEEEEecCCCCCc
Q psy2762           9 DTGHEDMIHDAEMDYLG--LYLATCSSDHTVKVFNLDRNLKKDDS-----HSQKGTLIAELKGHSGPVWQVAWAHPQFGT   81 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~~~-----~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~   81 (318)
                      ..+|.+.++.++.++.|  .++++=+..|.|+|||+....+.-..     .......+.++.+|.+.-+++.|++.. ..
T Consensus       147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~-~g  225 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIK-TG  225 (440)
T ss_pred             ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccc-cc
Confidence            34799999999988765  57788889999999998643222111     112345688999999999999998643 45


Q ss_pred             EEEEEECCCeEEEEeCCCCcEEE-EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc
Q psy2762          82 LLASCSYDRKVIIWRGDNGNWFK-YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      .|+||.--+.|.+|...++.+.. ...+.+|+..|..+.|+|.+ ..+||+||.||+|+|||++...+... ...+.|..
T Consensus       226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE-~~vfaScS~DgsIrIWDiRs~~~~~~-~~~kAh~s  303 (440)
T KOG0302|consen  226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE-DGVFASCSCDGSIRIWDIRSGPKKAA-VSTKAHNS  303 (440)
T ss_pred             ccccCccccceEeeeeccCceeecCccccccccchhhhccCCcc-CceEEeeecCceEEEEEecCCCccce-eEeeccCC
Confidence            68898888999999988887643 33466799999999999987 46899999999999999987644322 23368999


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      .|+-++|+...                 ..||+|+.||+++|||++.-+. .+.+.|+-|+.+|++|.|+|.   ....|
T Consensus       304 DVNVISWnr~~-----------------~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~---e~s~i  363 (440)
T KOG0302|consen  304 DVNVISWNRRE-----------------PLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPH---EDSVI  363 (440)
T ss_pred             ceeeEEccCCc-----------------ceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccc---cCceE
Confidence            99999998752                 3799999999999999874211 245678889999999999997   67789


Q ss_pred             EEEeCCCeEEEEEcCCCcc--------------eeeEEeeecC--CcEEEEEEcCCC-CEEEEEeCCCeEEEEE
Q psy2762         240 ASCSQDRKVIIWTSNDYVT--------------WTPFIMNTFD--DVVWNVSWSLTG-DILTVSCGDNSVSLWK  296 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~--------------~~~~~~~~~~--~~v~~v~~spdg-~~l~s~~~D~~v~iW~  296 (318)
                      +++|.|.+|.|||+.-...              ..|.++..|+  ..|..|.|++.- -+|+|++-|| +.||.
T Consensus       364 aasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  364 AASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             EeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence            9999999999999755321              2345666664  468899999862 4677888886 56664

>KOG1332|consensus

Probab=99.95  E-value=8e-27  Score=188.23  Aligned_cols=221  Identities=31%  Similarity=0.506  Sum_probs=174.8

Q ss_pred             eecCCCcceeeeeeec-C-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           7 LVDTGHEDMIHDAEMD-Y-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~-~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      ..+.||+++|..++|- | .|.+||||++||.|.||.-+.+         ..........|...|++++|.+...|-.||
T Consensus        50 ~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g---------~w~k~~e~~~h~~SVNsV~wapheygl~La  120 (299)
T KOG1332|consen   50 AELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENG---------RWTKAYEHAAHSASVNSVAWAPHEYGLLLA  120 (299)
T ss_pred             eEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCC---------chhhhhhhhhhcccceeecccccccceEEE
Confidence            3568999999999994 3 7999999999999999986522         344566778999999999998766788999


Q ss_pred             EEECCCeEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCC------------cEEEEeecCCeEEEEEeecCCCCcc
Q psy2762          85 SCSYDRKVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFG------------LILACGSSDGTISFLTYMSDTNSWE  151 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~------------~~lasgs~d~~i~i~~~~~~~~~~~  151 (318)
                      +++.||.|.|.+++.. .+........|.-.|++|+|.|....            +.|++|+.|..|+||++..+  .|.
T Consensus       121 casSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~--~w~  198 (299)
T KOG1332|consen  121 CASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD--SWK  198 (299)
T ss_pred             EeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc--chh
Confidence            9999999999987765 33333344579999999999986321            56999999999999998665  344


Q ss_pred             e-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--eEEEEEEcccCCCCeeEEEE
Q psy2762         152 S-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAW  228 (318)
Q Consensus       152 ~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~~~~~~~~~~h~~~V~~v~~  228 (318)
                      . ..+.+|..-|..++|.|..+..             -.+||++|+||+|-||.....  ++ ....++.....+..++|
T Consensus       199 ~e~~l~~H~dwVRDVAwaP~~gl~-------------~s~iAS~SqDg~viIwt~~~e~e~w-k~tll~~f~~~~w~vSW  264 (299)
T KOG1332|consen  199 LERTLEGHKDWVRDVAWAPSVGLP-------------KSTIASCSQDGTVIIWTKDEEYEPW-KKTLLEEFPDVVWRVSW  264 (299)
T ss_pred             hhhhhhhcchhhhhhhhccccCCC-------------ceeeEEecCCCcEEEEEecCccCcc-cccccccCCcceEEEEE
Confidence            3 3477999999999999975321             247999999999999976532  23 22334556778999999


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                      |+.    |..|+.++.|..+.+|.-...
T Consensus       265 S~s----Gn~LaVs~GdNkvtlwke~~~  288 (299)
T KOG1332|consen  265 SLS----GNILAVSGGDNKVTLWKENVD  288 (299)
T ss_pred             ecc----ccEEEEecCCcEEEEEEeCCC
Confidence            996    889999999999999965443

>KOG1446|consensus

Probab=99.95  E-value=9.1e-25  Score=182.39  Aligned_cols=252  Identities=14%  Similarity=0.217  Sum_probs=191.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC--C
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY--D   89 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~--D   89 (318)
                      -.+.|+++.|+++|.+|++++.|.+++|||..           .++.+.++..+...|-.+.|.++  ...+..++.  |
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~-----------~g~~~~ti~skkyG~~~~~Fth~--~~~~i~sStk~d   79 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSL-----------SGKQVKTINSKKYGVDLACFTHH--SNTVIHSSTKED   79 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcC-----------CCceeeEeecccccccEEEEecC--CceEEEccCCCC
Confidence            46789999999999999999999999999997           45788888888888999999875  444555555  8


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      .+||.-++.+.++++.  +.||...|++++.+|-  +..+++++.|++|++||++..+.+.   .+  +..+-..++|.|
T Consensus        80 ~tIryLsl~dNkylRY--F~GH~~~V~sL~~sP~--~d~FlS~S~D~tvrLWDlR~~~cqg---~l--~~~~~pi~AfDp  150 (311)
T KOG1446|consen   80 DTIRYLSLHDNKYLRY--FPGHKKRVNSLSVSPK--DDTFLSSSLDKTVRLWDLRVKKCQG---LL--NLSGRPIAAFDP  150 (311)
T ss_pred             CceEEEEeecCceEEE--cCCCCceEEEEEecCC--CCeEEecccCCeEEeeEecCCCCce---EE--ecCCCcceeECC
Confidence            9999999988876554  6799999999999998  4679999999999999997544221   11  112234567888


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--eEEEEEEcc-cCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLE-NHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~~~~~~~~~-~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      .                 |-++|++.....|+|||++.-  .+.....+. +.....+.+.|||+    |++|..+...+
T Consensus       151 ~-----------------GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~d----GK~iLlsT~~s  209 (311)
T KOG1446|consen  151 E-----------------GLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPD----GKSILLSTNAS  209 (311)
T ss_pred             C-----------------CcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCC----CCEEEEEeCCC
Confidence            6                 568888888889999997642  223444443 44556799999996    88888888899


Q ss_pred             eEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      .+.+.|.=.+............ ..-.+..|+|||+.+.+++.||+|.+|+++++.+..-.
T Consensus       210 ~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~  270 (311)
T KOG1446|consen  210 FIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVL  270 (311)
T ss_pred             cEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEe
Confidence            9999987665421111111111 22368899999999999999999999999887665533

>KOG0299|consensus

Probab=99.95  E-value=7.5e-26  Score=196.84  Aligned_cols=260  Identities=18%  Similarity=0.218  Sum_probs=195.7

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC-CCCCCC-----cceEEEEe-cccccCeEEEEecCCCC
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-DDSHSQ-----KGTLIAEL-KGHSGPVWQVAWAHPQF   79 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-~~~~~~-----~~~~~~~~-~~h~~~V~~v~~~~~~~   79 (318)
                      +....|.-+|.+++++|++++.++++.|++|.=|++...-.. +.....     .+..+..- ++|...|.+++.++  |
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~--D  213 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS--D  213 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC--C
Confidence            345679999999999999999999999999999998744322 111110     12222212 48999999999874  6


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +++||+|+.|..|.||+.++..  ++..+.+|.+.|.+++|-...  ..+.+++.|..|++|+.....   -+..+.+|+
T Consensus       214 gkylatgg~d~~v~Iw~~~t~e--hv~~~~ghr~~V~~L~fr~gt--~~lys~s~Drsvkvw~~~~~s---~vetlyGHq  286 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLE--HVKVFKGHRGAVSSLAFRKGT--SELYSASADRSVKVWSIDQLS---YVETLYGHQ  286 (479)
T ss_pred             CcEEEecCCCceEEEecCcccc--hhhcccccccceeeeeeecCc--cceeeeecCCceEEEehhHhH---HHHHHhCCc
Confidence            9999999999999999998876  444578999999999998763  346788999999999874322   123455899


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ..|..+.-..-                 ...+-.|+.|+++|+|++....   ...+.+|...+-|++|-.     ..++
T Consensus       287 d~v~~IdaL~r-----------------eR~vtVGgrDrT~rlwKi~ees---qlifrg~~~sidcv~~In-----~~Hf  341 (479)
T KOG0299|consen  287 DGVLGIDALSR-----------------ERCVTVGGRDRTVRLWKIPEES---QLIFRGGEGSIDCVAFIN-----DEHF  341 (479)
T ss_pred             cceeeechhcc-----------------cceEEeccccceeEEEeccccc---eeeeeCCCCCeeeEEEec-----ccce
Confidence            88877643221                 2445566799999999985432   234678988999999976     4689


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeE--------Eeeec--CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPF--------IMNTF--DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~--------~~~~~--~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|||.||.|.+|++.+....-..        .+...  ..+|.+|+..|...++|||+.+|.||+|.++.+
T Consensus       342 vsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  342 VSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             eeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence            99999999999998775421110        00111  138999999999999999999999999998775

>KOG0278|consensus

Probab=99.95  E-value=7.2e-27  Score=189.09  Aligned_cols=201  Identities=23%  Similarity=0.332  Sum_probs=160.5

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .|+..|.+++|+.|.++|++|+.++.+||||++++          ..+...+.+|++.|..+.|.+.  .+.++|+++|+
T Consensus        98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p----------~App~E~~ghtg~Ir~v~wc~e--D~~iLSSadd~  165 (334)
T KOG0278|consen   98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRP----------KAPPKEISGHTGGIRTVLWCHE--DKCILSSADDK  165 (334)
T ss_pred             hhhheeeeEEecccchhhhccchHHHhhhhhccCC----------CCCchhhcCCCCcceeEEEecc--CceEEeeccCC
Confidence            58999999999999999999999999999999843          2346778999999999999863  57888889999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +||+||..++..++...   .+.+|+++.++++  +.++ +-...+.|++||...-    .+.+...-+-.|.+.+.+|+
T Consensus       166 tVRLWD~rTgt~v~sL~---~~s~VtSlEvs~d--G~il-Tia~gssV~Fwdaksf----~~lKs~k~P~nV~SASL~P~  235 (334)
T KOG0278|consen  166 TVRLWDHRTGTEVQSLE---FNSPVTSLEVSQD--GRIL-TIAYGSSVKFWDAKSF----GLLKSYKMPCNVESASLHPK  235 (334)
T ss_pred             ceEEEEeccCcEEEEEe---cCCCCcceeeccC--CCEE-EEecCceeEEeccccc----cceeeccCccccccccccCC
Confidence            99999999987555443   3577999999998  5554 4455678999986322    11111122334677888887


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                      .                 ..+++|++|..++.||..+++-.... -++|-++|.||.|+|+    |...++||+||+|||
T Consensus       236 k-----------------~~fVaGged~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPd----GE~yAsGSEDGTirl  293 (334)
T KOG0278|consen  236 K-----------------EFFVAGGEDFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPD----GELYASGSEDGTIRL  293 (334)
T ss_pred             C-----------------ceEEecCcceEEEEEeccCCceeeec-ccCCCCceEEEEECCC----CceeeccCCCceEEE
Confidence            4                 47899999999999999988633221 3899999999999996    889999999999999


Q ss_pred             EEcCC
Q psy2762         251 WTSND  255 (318)
Q Consensus       251 w~~~~  255 (318)
                      |....
T Consensus       294 WQt~~  298 (334)
T KOG0278|consen  294 WQTTP  298 (334)
T ss_pred             EEecC
Confidence            97654

>KOG0308|consensus

Probab=99.95  E-value=6.4e-27  Score=210.95  Aligned_cols=251  Identities=21%  Similarity=0.282  Sum_probs=206.4

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..|.+.|+.++..-+|+.|+|||.|-+|++|+....         ..-+..+++.|.+.|.|+++.. .+..++||||.|
T Consensus        70 e~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~---------~~~c~stir~H~DYVkcla~~a-k~~~lvaSgGLD  139 (735)
T KOG0308|consen   70 EHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKD---------NTFCMSTIRTHKDYVKCLAYIA-KNNELVASGGLD  139 (735)
T ss_pred             hhhHhHHhhHHhhcCCCceEEecCCceEEEeecccC---------cchhHhhhhcccchheeeeecc-cCceeEEecCCC
Confidence            469999999999999999999999999999998632         1135678899999999999843 468899999999


Q ss_pred             CeEEEEeCCCCc--------EEEEEEec-CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc
Q psy2762          90 RKVIIWRGDNGN--------WFKYYEYN-NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        90 g~v~vWd~~~~~--------~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      +.|.|||+..+.        .+....+. ++..+|++++-++.  +..+++|+..+.+++||.+..+   +..++.+|+.
T Consensus       140 ~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t--~t~ivsGgtek~lr~wDprt~~---kimkLrGHTd  214 (735)
T KOG0308|consen  140 RKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQT--GTIIVSGGTEKDLRLWDPRTCK---KIMKLRGHTD  214 (735)
T ss_pred             ccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCc--ceEEEecCcccceEEecccccc---ceeeeecccc
Confidence            999999998652        12223333 78899999999998  7899999999999999987765   3567789999


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .|..+..+++                 |..++++|.||+||+||+....+  .+++..|.+.|.++.-+|+    =.++.
T Consensus       215 NVr~ll~~dD-----------------Gt~~ls~sSDgtIrlWdLgqQrC--l~T~~vH~e~VWaL~~~~s----f~~vY  271 (735)
T KOG0308|consen  215 NVRVLLVNDD-----------------GTRLLSASSDGTIRLWDLGQQRC--LATYIVHKEGVWALQSSPS----FTHVY  271 (735)
T ss_pred             ceEEEEEcCC-----------------CCeEeecCCCceEEeeeccccce--eeeEEeccCceEEEeeCCC----cceEE
Confidence            9999998886                 57899999999999999876554  5668899999999999986    56899


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|+.|+.|..=++.+....  ..+-..+.+|..+..+-+.+.+.++..|+.|+-|.....
T Consensus       272 sG~rd~~i~~Tdl~n~~~~--tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~  329 (735)
T KOG0308|consen  272 SGGRDGNIYRTDLRNPAKS--TLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD  329 (735)
T ss_pred             ecCCCCcEEecccCCchhh--eEeecCCCchhhhhhccccCCceeeeccccceecCCccc
Confidence            9999999999888875432  233345678888888876666678889999999986553

>KOG0647|consensus

Probab=99.95  E-value=1.3e-25  Score=186.29  Aligned_cols=253  Identities=21%  Similarity=0.258  Sum_probs=180.5

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE-EEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL-IAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      +..-..+.|.+++||| ...+|+.+|.|++||+|+++..          +.. -+....|.++|.+++|+  .+|..+++
T Consensus        22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~----------g~~~~ka~~~~~~PvL~v~Ws--ddgskVf~   89 (347)
T KOG0647|consen   22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS----------GQLVPKAQQSHDGPVLDVCWS--DDGSKVFS   89 (347)
T ss_pred             cCCCcccchheeEeccccCceEEecccCCceEEEEEecC----------CcccchhhhccCCCeEEEEEc--cCCceEEe
Confidence            3345678999999999 5566768999999999999732          211 24556799999999997  36999999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      |+.|+.+++||+.+++.   .++..|.++|.++.|-+...-.+|++||.|++|++||.+....   +..+ .-...|.+.
T Consensus        90 g~~Dk~~k~wDL~S~Q~---~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~p---v~t~-~LPeRvYa~  162 (347)
T KOG0647|consen   90 GGCDKQAKLWDLASGQV---SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNP---VATL-QLPERVYAA  162 (347)
T ss_pred             eccCCceEEEEccCCCe---eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCe---eeee-eccceeeeh
Confidence            99999999999999853   3456799999999999864445899999999999999864321   1111 111222221


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----CCCeeEEEEccCCCCCccEEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----SDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                          +..               -..++.+..++.|.+|++++..-    +++.+    +-.++||+..++    ....+.
T Consensus       163 ----Dv~---------------~pm~vVata~r~i~vynL~n~~t----e~k~~~SpLk~Q~R~va~f~d----~~~~al  215 (347)
T KOG0647|consen  163 ----DVL---------------YPMAVVATAERHIAVYNLENPPT----EFKRIESPLKWQTRCVACFQD----KDGFAL  215 (347)
T ss_pred             ----hcc---------------CceeEEEecCCcEEEEEcCCCcc----hhhhhcCcccceeeEEEEEec----CCceEe
Confidence                100               12477888889999999986531    12222    334899999886    444588


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecC---------CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFD---------DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~---------~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      ||-.|.+-|-.+.....-.-..+.-|.         -.|++++|+|....|+++|.||+..+||.+...+..++
T Consensus       216 GsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s  289 (347)
T KOG0647|consen  216 GSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS  289 (347)
T ss_pred             eeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc
Confidence            999999999887764210011111121         25899999999889999999999999997665444443

>KOG0306|consensus

Probab=99.94  E-value=2.2e-25  Score=203.97  Aligned_cols=211  Identities=18%  Similarity=0.223  Sum_probs=168.2

Q ss_pred             CcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          54 QKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        54 ~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      ++.++++++..  +.+-+..|. | -+.++++|...|.+.|+|+.+.....  ..+.|.+.+.+++.+||  +..+++|+
T Consensus       402 ~t~kciRTi~~--~y~l~~~Fv-p-gd~~Iv~G~k~Gel~vfdlaS~~l~E--ti~AHdgaIWsi~~~pD--~~g~vT~s  473 (888)
T KOG0306|consen  402 DTLKCIRTITC--GYILASKFV-P-GDRYIVLGTKNGELQVFDLASASLVE--TIRAHDGAIWSISLSPD--NKGFVTGS  473 (888)
T ss_pred             cCcceeEEecc--ccEEEEEec-C-CCceEEEeccCCceEEEEeehhhhhh--hhhccccceeeeeecCC--CCceEEec
Confidence            34566777753  378888886 4 36889999999999999998876433  34589999999999999  67799999


Q ss_pred             cCCeEEEEEeecCCC--Ccceeeec-------ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEE
Q psy2762         134 SDGTISFLTYMSDTN--SWESRKIA-------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK  204 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~--~~~~~~~~-------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd  204 (318)
                      .|++|++|++..-..  ..+.+.+.       .-+..+.++++||+                 +++||.+--|++|+||=
T Consensus       474 aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd-----------------gk~LaVsLLdnTVkVyf  536 (888)
T KOG0306|consen  474 ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD-----------------GKLLAVSLLDNTVKVYF  536 (888)
T ss_pred             CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCC-----------------CcEEEEEeccCeEEEEE
Confidence            999999999753221  11111122       12345788999997                 58999999999999998


Q ss_pred             ccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEE
Q psy2762         205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT  284 (318)
Q Consensus       205 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~  284 (318)
                      +++-++  ...+-||.-||.|+..||+    +.+++|||.|++|+||-++=+.+  ...+..|++.|.+|.|.|....+.
T Consensus       537 lDtlKF--flsLYGHkLPV~smDIS~D----SklivTgSADKnVKiWGLdFGDC--HKS~fAHdDSvm~V~F~P~~~~FF  608 (888)
T KOG0306|consen  537 LDTLKF--FLSLYGHKLPVLSMDISPD----SKLIVTGSADKNVKIWGLDFGDC--HKSFFAHDDSVMSVQFLPKTHLFF  608 (888)
T ss_pred             ecceee--eeeecccccceeEEeccCC----cCeEEeccCCCceEEeccccchh--hhhhhcccCceeEEEEcccceeEE
Confidence            887654  3567899999999999996    88999999999999996654333  234678999999999999999999


Q ss_pred             EEeCCCeEEEEEE
Q psy2762         285 VSCGDNSVSLWKE  297 (318)
Q Consensus       285 s~~~D~~v~iW~~  297 (318)
                      ++|.|+.|+-||-
T Consensus       609 t~gKD~kvKqWDg  621 (888)
T KOG0306|consen  609 TCGKDGKVKQWDG  621 (888)
T ss_pred             EecCcceEEeech
Confidence            9999999999984

>KOG0288|consensus

Probab=99.94  E-value=9.5e-27  Score=199.98  Aligned_cols=247  Identities=20%  Similarity=0.273  Sum_probs=191.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..|.+.|..+.|-++...|++|+.|..|++|++...         +...+.+|.|-.++|+.+.|.+  +++++++++.|
T Consensus       172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~---------k~~~~~tLaGs~g~it~~d~d~--~~~~~iAas~d  240 (459)
T KOG0288|consen  172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGE---------KSELISTLAGSLGNITSIDFDS--DNKHVIAASND  240 (459)
T ss_pred             hccccccceeEEccCcchhhhcchhhhhhhhhcccc---------hhhhhhhhhccCCCcceeeecC--CCceEEeecCC
Confidence            469999999999999899999999999999998732         2346788999999999999975  48999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      +.+++|++.+.+..  .++.+|...|.++.|...+  ..+++|+.|.+|++||+....   ..+.+ -....|+.+..++
T Consensus       241 ~~~r~Wnvd~~r~~--~TLsGHtdkVt~ak~~~~~--~~vVsgs~DRtiK~WDl~k~~---C~kt~-l~~S~cnDI~~~~  312 (459)
T KOG0288|consen  241 KNLRLWNVDSLRLR--HTLSGHTDKVTAAKFKLSH--SRVVSGSADRTIKLWDLQKAY---CSKTV-LPGSQCNDIVCSI  312 (459)
T ss_pred             Cceeeeeccchhhh--hhhcccccceeeehhhccc--cceeeccccchhhhhhhhhhh---eeccc-cccccccceEecc
Confidence            99999999877633  3577899999999999873  348999999999999974321   11111 1112234443332


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                                         ..+++|..|++||+||.+...+..  +.+.+. .|++|..+++    +..|.+++.|.++.
T Consensus       313 -------------------~~~~SgH~DkkvRfwD~Rs~~~~~--sv~~gg-~vtSl~ls~~----g~~lLsssRDdtl~  366 (459)
T KOG0288|consen  313 -------------------SDVISGHFDKKVRFWDIRSADKTR--SVPLGG-RVTSLDLSMD----GLELLSSSRDDTLK  366 (459)
T ss_pred             -------------------eeeeecccccceEEEeccCCceee--EeecCc-ceeeEeeccC----CeEEeeecCCCcee
Confidence                               358999999999999988776543  334444 7999999996    88899999999999


Q ss_pred             EEEcCCCcceeeEEeeec--CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         250 IWTSNDYVTWTPFIMNTF--DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~--~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.|+.+.....+..-.++  ..-...+.||||+.|+|+||.||.|.||++.+++
T Consensus       367 viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK  420 (459)
T KOG0288|consen  367 VIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK  420 (459)
T ss_pred             eeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce
Confidence            999987643222221111  1237889999999999999999999999987763

>KOG0293|consensus

Probab=99.94  E-value=3.6e-26  Score=196.44  Aligned_cols=224  Identities=25%  Similarity=0.350  Sum_probs=166.0

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~l   83 (318)
                      |+....||..+|.-+.||||.+||++|+.|..+++||+..           |.....+. +|...+.+++|.+  ||..|
T Consensus       261 l~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t-----------gd~~~~y~~~~~~S~~sc~W~p--Dg~~~  327 (519)
T KOG0293|consen  261 LKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT-----------GDLRHLYPSGLGFSVSSCAWCP--DGFRF  327 (519)
T ss_pred             eeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc-----------chhhhhcccCcCCCcceeEEcc--CCcee
Confidence            3446679999999999999999999999999999999973           34443333 4567899999974  59999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCC-CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNH-DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      ++|+.|+++..||.+... ..  ..++. ...|.+++.++|  ++.+.+...|..|++++......    +.+-.-..++
T Consensus       328 V~Gs~dr~i~~wdlDgn~-~~--~W~gvr~~~v~dlait~D--gk~vl~v~~d~~i~l~~~e~~~d----r~lise~~~i  398 (519)
T KOG0293|consen  328 VTGSPDRTIIMWDLDGNI-LG--NWEGVRDPKVHDLAITYD--GKYVLLVTVDKKIRLYNREARVD----RGLISEEQPI  398 (519)
T ss_pred             EecCCCCcEEEecCCcch-hh--cccccccceeEEEEEcCC--CcEEEEEecccceeeechhhhhh----hccccccCce
Confidence            999999999999987542 11  12221 245899999999  77888888999999998643321    1122233456


Q ss_pred             ceeeeCCCCCCC---------ccccccC------------------CCCC-CccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762         163 NAVSWGPGIGSL---------SELDLKG------------------SKLG-GVAKRLVSGGCDNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       163 ~~~~~~p~~~~~---------~~~~~~~------------------~~~~-~~~~~lasgs~d~~i~iwd~~~~~~~~~~  214 (318)
                      ++...|.+....         ...+++.                  +.++ ....++|+||+|+.|+||+..++++  ..
T Consensus       399 ts~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkl--l~  476 (519)
T KOG0293|consen  399 TSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKL--LA  476 (519)
T ss_pred             eEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCce--eE
Confidence            666666553211         0111110                  1122 1135899999999999999988864  57


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      ++.||...|+||+|+|.   +..++||+|+||+||||-...
T Consensus       477 ~LsGHs~~vNcVswNP~---~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  477 VLSGHSKTVNCVSWNPA---DPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             eecCCcceeeEEecCCC---CHHHhhccCCCCeEEEecCCc
Confidence            88999999999999997   789999999999999997654

>KOG0300|consensus

Probab=99.94  E-value=1.4e-25  Score=187.31  Aligned_cols=261  Identities=22%  Similarity=0.301  Sum_probs=201.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcC-------------CCC---CC----------C---CcceE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLK-------------KDD---SH----------S---QKGTL   58 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~-------------~~~---~~----------~---~~~~~   58 (318)
                      .+.||.+.|++++|++.+.+++++|.|++-+||...-.++             ++.   ++          +   .-..+
T Consensus       185 ~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvP  264 (481)
T KOG0300|consen  185 TYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVP  264 (481)
T ss_pred             eecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeee
Confidence            4579999999999999999999999999999997221000             000   00          0   01245


Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      +..|.+|.+.|.++.|..  .|+.++++|+|++..+||++++..  +..+.+|....+.++-+|.  ..++++.+.|.+.
T Consensus       265 l~~ltgH~~vV~a~dWL~--gg~Q~vTaSWDRTAnlwDVEtge~--v~~LtGHd~ELtHcstHpt--QrLVvTsSrDtTF  338 (481)
T KOG0300|consen  265 LMRLTGHRAVVSACDWLA--GGQQMVTASWDRTANLWDVETGEV--VNILTGHDSELTHCSTHPT--QRLVVTSSRDTTF  338 (481)
T ss_pred             eeeeeccccceEehhhhc--CcceeeeeeccccceeeeeccCce--eccccCcchhccccccCCc--ceEEEEeccCcee
Confidence            788999999999999974  489999999999999999999874  4457799999999999998  6799999999999


Q ss_pred             EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762         139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~  218 (318)
                      ++||++..  .-.+..+.+|+..|.++.|..+                  ..+++||.|.+|+|||+++.. .++.++. 
T Consensus       339 RLWDFRea--I~sV~VFQGHtdtVTS~vF~~d------------------d~vVSgSDDrTvKvWdLrNMR-splATIR-  396 (481)
T KOG0300|consen  339 RLWDFREA--IQSVAVFQGHTDTVTSVVFNTD------------------DRVVSGSDDRTVKVWDLRNMR-SPLATIR-  396 (481)
T ss_pred             Eeccchhh--cceeeeecccccceeEEEEecC------------------CceeecCCCceEEEeeecccc-Ccceeee-
Confidence            99999632  1223345599999999999874                  469999999999999998753 2344432 


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-ee-EEeeecCCcEEEEEEcCCCC--EEEEEeCCCeEEE
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TP-FIMNTFDDVVWNVSWSLTGD--ILTVSCGDNSVSL  294 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~-~~~~~~~~~v~~v~~spdg~--~l~s~~~D~~v~i  294 (318)
                      -..+++.|..+..    +..|+.--+.+.||+||+.+.+.- .| ....+|...|.+++|..+..  -|.++|.|+.+--
T Consensus       397 tdS~~NRvavs~g----~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~g  472 (481)
T KOG0300|consen  397 TDSPANRVAVSKG----HPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAG  472 (481)
T ss_pred             cCCccceeEeecC----CceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeee
Confidence            3456888888763    557777778899999999875421 11 12346888999999996542  3678999999999


Q ss_pred             EEECCC
Q psy2762         295 WKENTD  300 (318)
Q Consensus       295 W~~~~~  300 (318)
                      |+++..
T Consensus       473 W~in~p  478 (481)
T KOG0300|consen  473 WKINTP  478 (481)
T ss_pred             eEeccc
Confidence            998875

>KOG4283|consensus

Probab=99.94  E-value=8e-25  Score=181.09  Aligned_cols=277  Identities=19%  Similarity=0.308  Sum_probs=193.9

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCC-CCCcceEEE---EecccccCeEEEEecCCCCCcE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDS-HSQKGTLIA---ELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~-~~~~~~~~~---~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      +..-|.+.|+++.+.+ .|+|++||+.||.|.|||++.....+.. ...+.+++.   --.+|.-.|..+.|. |.|...
T Consensus        38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~Wy-P~DtGm  116 (397)
T KOG4283|consen   38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWY-PIDTGM  116 (397)
T ss_pred             eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEe-eecCce
Confidence            4456999999999976 6899999999999999999733111110 011112211   123688899999997 467889


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC-CcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF-GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      |.|+|.|.++||||..+-+....+++   ++.|++-+++|-.. ..++|+|..|-.|++.|+..+.-   ...+.+|..+
T Consensus       117 FtssSFDhtlKVWDtnTlQ~a~~F~m---e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~---sH~LsGHr~~  190 (397)
T KOG4283|consen  117 FTSSSFDHTLKVWDTNTLQEAVDFKM---EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSF---SHTLSGHRDG  190 (397)
T ss_pred             eecccccceEEEeecccceeeEEeec---CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcc---eeeeccccCc
Confidence            99999999999999887654455544   46788888988542 46889999999999999876652   3567899999


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eE-----------EE-EEEcccCCCCeeEEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KW-----------IE-ETKLENHSDWVRDVAW  228 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~-----------~~-~~~~~~h~~~V~~v~~  228 (318)
                      |..+.|+|..                ...||+||.||.||+||.+.. .+           .+ ...-..|.+.|+.++|
T Consensus       191 vlaV~Wsp~~----------------e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~  254 (397)
T KOG4283|consen  191 VLAVEWSPSS----------------EWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAW  254 (397)
T ss_pred             eEEEEeccCc----------------eeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeee
Confidence            9999999963                357999999999999997642 00           01 1123578889999999


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCCCcce-eeE------------E-eeecCCcEEEEEEcC--CCCEEEEEeCCCeE
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TPF------------I-MNTFDDVVWNVSWSL--TGDILTVSCGDNSV  292 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~~------------~-~~~~~~~v~~v~~sp--dg~~l~s~~~D~~v  292 (318)
                      ..+    +.++++++.|..+++|+..++... .+.            . .......|  +.+-|  ++-.|.+..+...|
T Consensus       255 tSd----~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~v--fv~~p~~~~lall~~~sgs~i  328 (397)
T KOG4283|consen  255 TSD----ARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDV--FVLFPNDGSLALLNLLEGSFV  328 (397)
T ss_pred             ccc----chhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccce--EEEEecCCeEEEEEccCceEE
Confidence            985    899999999999999997765411 000            0 00001112  12223  34456677777789


Q ss_pred             EEEEECCCCceEEEeeeccccc
Q psy2762         293 SLWKENTDGAWQCITEMGKTSE  314 (318)
Q Consensus       293 ~iW~~~~~~~~~~~~~~~~~~~  314 (318)
                      |.|+.. .....|..+-..+++
T Consensus       329 r~l~~h-~k~i~c~~~~~~fq~  349 (397)
T KOG4283|consen  329 RRLSTH-LKRINCAAYRPDFEQ  349 (397)
T ss_pred             Eeeecc-cceeeEEeecCchhh
Confidence            999866 444445555444444

>KOG0772|consensus

Probab=99.94  E-value=1.4e-25  Score=197.54  Aligned_cols=261  Identities=20%  Similarity=0.276  Sum_probs=188.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC------------CCCC----CC------------------
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK------------DDSH----SQ------------------   54 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~------------~~~~----~~------------------   54 (318)
                      ..+|+..|.++++.|.|.+|+|||.|-+|++||+..+...            +.+.    +.                  
T Consensus       163 l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~D  242 (641)
T KOG0772|consen  163 LKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLD  242 (641)
T ss_pred             ccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEc
Confidence            4689999999999999999999999999999998732111            0000    00                  


Q ss_pred             -cceE-------------EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE-EEEEEec---CCCcCeE
Q psy2762          55 -KGTL-------------IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-FKYYEYN---NHDSSVN  116 (318)
Q Consensus        55 -~~~~-------------~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~-~~~~~~~---~h~~~v~  116 (318)
                       .|..             +..-+||...++|.+| +|.....|+++|.||++||||+...+. .++++-.   +-.-++.
T Consensus       243 RdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~w-hP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t  321 (641)
T KOG0772|consen  243 RDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCW-HPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT  321 (641)
T ss_pred             cCCceeeeeeccchhhhhhhccCCceeeeecccc-ccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence             0100             2334689999999999 566678899999999999999876431 2222221   2334789


Q ss_pred             EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc--ccceeeeCCCCCCCccccccCCCCCCccceEEEe
Q psy2762         117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG  194 (318)
Q Consensus       117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg  194 (318)
                      .++|+|+  +.++|+|..||.|.+|+............-.+|..  .+++++||++                 +++|++-
T Consensus       322 sC~~nrd--g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d-----------------g~~LlSR  382 (641)
T KOG0772|consen  322 SCAWNRD--GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD-----------------GNYLLSR  382 (641)
T ss_pred             eeecCCC--cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccc-----------------cchhhhc
Confidence            9999999  77899999999999999743332212222237876  8999999997                 6899999


Q ss_pred             cCCCeEEEEEccCCeEEEEEEcccC--CCCeeEEEEccCCCCCccEEEEEeC------CCeEEEEEcCCCcceeeEEeee
Q psy2762         195 GCDNLIKIWKQEGDKWIEETKLENH--SDWVRDVAWAPSWGLSKCMIASCSQ------DRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       195 s~d~~i~iwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~~~l~s~s~------D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      |.|+++++||++..+. ++.+..+-  ..+-+.++|||+    ..+|++|..      -+++.+||..+..  ....+.-
T Consensus       383 g~D~tLKvWDLrq~kk-pL~~~tgL~t~~~~tdc~FSPd----~kli~TGtS~~~~~~~g~L~f~d~~t~d--~v~ki~i  455 (641)
T KOG0772|consen  383 GFDDTLKVWDLRQFKK-PLNVRTGLPTPFPGTDCCFSPD----DKLILTGTSAPNGMTAGTLFFFDRMTLD--TVYKIDI  455 (641)
T ss_pred             cCCCceeeeecccccc-chhhhcCCCccCCCCccccCCC----ceEEEecccccCCCCCceEEEEecccee--eEEEecC
Confidence            9999999999886431 23333332  234578999996    677877753      4678999876532  1122222


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      -+..|-.+.|+|-=++|..++.||++.++-
T Consensus       456 ~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  456 STASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             CCceEEEEeecchhhheeeecCCCceEEEE
Confidence            246788999999988888899999999985

>KOG0310|consensus

Probab=99.94  E-value=1.5e-25  Score=196.30  Aligned_cols=242  Identities=17%  Similarity=0.231  Sum_probs=192.0

Q ss_pred             cceeeeeeecCCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      ...|.+++|+|...| +|..+ .-.|.||+...           ....+++.-..+.|+++.|.  .||.+||.|...|.
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~-----------~~~~k~~srFk~~v~s~~fR--~DG~LlaaGD~sG~   91 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVT-----------RSVRKTFSRFKDVVYSVDFR--SDGRLLAAGDESGH   91 (487)
T ss_pred             cCcceeEecCCCCCCceEEec-ccEEEEEecch-----------hhhhhhHHhhccceeEEEee--cCCeEEEccCCcCc
Confidence            558999999997655 33322 45899998752           23456677788999999996  46999999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |+|+|..+..  ....+.+|..+|..+.|+|++ ++.+++|+.|+.+++||.....   .+..+.+|+.-|.+.+|+|..
T Consensus        92 V~vfD~k~r~--iLR~~~ah~apv~~~~f~~~d-~t~l~s~sDd~v~k~~d~s~a~---v~~~l~~htDYVR~g~~~~~~  165 (487)
T KOG0310|consen   92 VKVFDMKSRV--ILRQLYAHQAPVHVTKFSPQD-NTMLVSGSDDKVVKYWDLSTAY---VQAELSGHTDYVRCGDISPAN  165 (487)
T ss_pred             EEEeccccHH--HHHHHhhccCceeEEEecccC-CeEEEecCCCceEEEEEcCCcE---EEEEecCCcceeEeeccccCC
Confidence            9999965422  233467899999999999986 7899999999999999984332   244678999999999999953


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      ++.++|||.||+||+||.+... ....++ .|..+|..+.|-|.    |..|||+|- ..+|||
T Consensus       166 ----------------~hivvtGsYDg~vrl~DtR~~~-~~v~el-nhg~pVe~vl~lps----gs~iasAgG-n~vkVW  222 (487)
T KOG0310|consen  166 ----------------DHIVVTGSYDGKVRLWDTRSLT-SRVVEL-NHGCPVESVLALPS----GSLIASAGG-NSVKVW  222 (487)
T ss_pred             ----------------CeEEEecCCCceEEEEEeccCC-ceeEEe-cCCCceeeEEEcCC----CCEEEEcCC-CeEEEE
Confidence                            4679999999999999987652 123333 69999999999995    788998874 559999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      |+..+.. .+.....|...|.++.+.-+++.|+|+|-|+.|+++++.
T Consensus       223 Dl~~G~q-ll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t  268 (487)
T KOG0310|consen  223 DLTTGGQ-LLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT  268 (487)
T ss_pred             EecCCce-ehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc
Confidence            9986542 233334588999999999999999999999999999943

>KOG1407|consensus

Probab=99.94  E-value=2e-24  Score=175.90  Aligned_cols=234  Identities=21%  Similarity=0.343  Sum_probs=184.6

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ...||.+.|..++++| ...++++++.|++|++||..           .++++.....-.+.+ .+.|++  +|++++.+
T Consensus        59 ~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r-----------~~k~~~~i~~~~eni-~i~wsp--~g~~~~~~  124 (313)
T KOG1407|consen   59 VYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIR-----------SGKCTARIETKGENI-NITWSP--DGEYIAVG  124 (313)
T ss_pred             cccCCCcchhhheeCCCCCcceEEecCCceEEEEEec-----------cCcEEEEeeccCcce-EEEEcC--CCCEEEEe
Confidence            4579999999999986 56799999999999999986           346666665544444 466765  48999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +-|..|...|.++.+.....+   ..-.++-++|+-+  +.++...+..|+|.|..+-.-+   .+..+.+|...|.++.
T Consensus       125 ~kdD~it~id~r~~~~~~~~~---~~~e~ne~~w~~~--nd~Fflt~GlG~v~ILsypsLk---pv~si~AH~snCicI~  196 (313)
T KOG1407|consen  125 NKDDRITFIDARTYKIVNEEQ---FKFEVNEISWNNS--NDLFFLTNGLGCVEILSYPSLK---PVQSIKAHPSNCICIE  196 (313)
T ss_pred             cCcccEEEEEecccceeehhc---ccceeeeeeecCC--CCEEEEecCCceEEEEeccccc---cccccccCCcceEEEE
Confidence            999999999988655333322   3456788899965  4555555667899987763221   3456779999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|+                 ++|||+|+.|..+.+||++.-  +....+..+.-+|+.|+||.+    |++|||+|+|.
T Consensus       197 f~p~-----------------GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~d----g~~lASaSEDh  253 (313)
T KOG1407|consen  197 FDPD-----------------GRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHD----GRMLASASEDH  253 (313)
T ss_pred             ECCC-----------------CceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccC----cceeeccCccc
Confidence            9997                 689999999999999998754  445667788899999999985    99999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      .|-|-+++++..  . ....++++.++|+|+|...+||-+++|
T Consensus       254 ~IDIA~vetGd~--~-~eI~~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  254 FIDIAEVETGDR--V-WEIPCEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             eEEeEecccCCe--E-EEeeccCCceeEEecCCCceeeEEecC
Confidence            999999988652  1 122467899999999999999999876

>KOG0640|consensus

Probab=99.94  E-value=2.3e-25  Score=185.48  Aligned_cols=226  Identities=19%  Similarity=0.320  Sum_probs=176.0

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC------------Cc----EEEEEEecCCCcCeEEEEeeC
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN------------GN----WFKYYEYNNHDSSVNSIAWAP  122 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~------------~~----~~~~~~~~~h~~~v~~v~~~p  122 (318)
                      ...+..|.+++.+.+|++  ||.++|+||.|..|+|.|.+.            +.    .-.+.++-.|...|+++.|+|
T Consensus       105 t~ylt~HK~~cR~aafs~--DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP  182 (430)
T KOG0640|consen  105 TKYLTSHKSPCRAAAFSP--DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP  182 (430)
T ss_pred             eEEEeecccceeeeeeCC--CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc
Confidence            466788999999999974  699999999999999999751            11    012344556899999999999


Q ss_pred             CCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762         123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       123 ~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                      .  ..+|++|+.|++|+++|+...... ...+...-..+|.+++|+|.                 |.+|+.|..-.++|+
T Consensus       183 r--e~ILiS~srD~tvKlFDfsK~saK-rA~K~~qd~~~vrsiSfHPs-----------------GefllvgTdHp~~rl  242 (430)
T KOG0640|consen  183 R--ETILISGSRDNTVKLFDFSKTSAK-RAFKVFQDTEPVRSISFHPS-----------------GEFLLVGTDHPTLRL  242 (430)
T ss_pred             h--hheEEeccCCCeEEEEecccHHHH-HHHHHhhccceeeeEeecCC-----------------CceEEEecCCCceeE
Confidence            8  679999999999999998533210 11122244567999999996                 578999999999999


Q ss_pred             EEccCCeEEEE-EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCC
Q psy2762         203 WKQEGDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTG  280 (318)
Q Consensus       203 wd~~~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg  280 (318)
                      ||+.+-++... ..-.+|++.|++|.+|+.    +.+.+++|.||.|+|||--..++-.. ....|. ..|.+..|..+|
T Consensus       243 Ydv~T~QcfvsanPd~qht~ai~~V~Ys~t----~~lYvTaSkDG~IklwDGVS~rCv~t-~~~AH~gsevcSa~Ftkn~  317 (430)
T KOG0640|consen  243 YDVNTYQCFVSANPDDQHTGAITQVRYSST----GSLYVTASKDGAIKLWDGVSNRCVRT-IGNAHGGSEVCSAVFTKNG  317 (430)
T ss_pred             EeccceeEeeecCcccccccceeEEEecCC----ccEEEEeccCCcEEeeccccHHHHHH-HHhhcCCceeeeEEEccCC
Confidence            99987654322 223679999999999996    88999999999999999765543211 123454 579999999999


Q ss_pred             CEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         281 DILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      ++|+|.|.|.+|++|.+.++.-...+.-.|-
T Consensus       318 kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~  348 (430)
T KOG0640|consen  318 KYILSSGKDSTVKLWEISTGRMLKEYTGAGT  348 (430)
T ss_pred             eEEeecCCcceeeeeeecCCceEEEEecCCc
Confidence            9999999999999999998866665555433

>KOG0282|consensus

Probab=99.94  E-value=5.8e-26  Score=198.61  Aligned_cols=222  Identities=20%  Similarity=0.349  Sum_probs=166.6

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.+.||..+|.+++|+++|..++|+|.|+.|++||++           +|.++..+.. ...++|+.| +|.+.+.|++|
T Consensus       252 rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtE-----------TG~~~~~f~~-~~~~~cvkf-~pd~~n~fl~G  318 (503)
T KOG0282|consen  252 RTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTE-----------TGQVLSRFHL-DKVPTCVKF-HPDNQNIFLVG  318 (503)
T ss_pred             hhhhcchhhhhhhhccccCCeeeeeecceeeeeeccc-----------cceEEEEEec-CCCceeeec-CCCCCcEEEEe
Confidence            3557999999999999999999999999999999997           4677766642 345678998 55556899999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|+.|+.||+++++.++  .+..|-+.|+.|.|-+.  +..+++.+.|++++||++..+...-.+.....|+  +.++.
T Consensus       319 ~sd~ki~~wDiRs~kvvq--eYd~hLg~i~~i~F~~~--g~rFissSDdks~riWe~~~~v~ik~i~~~~~hs--mP~~~  392 (503)
T KOG0282|consen  319 GSDKKIRQWDIRSGKVVQ--EYDRHLGAILDITFVDE--GRRFISSSDDKSVRIWENRIPVPIKNIADPEMHT--MPCLT  392 (503)
T ss_pred             cCCCcEEEEeccchHHHH--HHHhhhhheeeeEEccC--CceEeeeccCccEEEEEcCCCccchhhcchhhcc--Cccee
Confidence            999999999999987433  55678999999999998  7899999999999999875443110111111233  33445


Q ss_pred             eCCCCCCCcc------ccc---------------cC---------CCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc
Q psy2762         167 WGPGIGSLSE------LDL---------------KG---------SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL  216 (318)
Q Consensus       167 ~~p~~~~~~~------~~~---------------~~---------~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~  216 (318)
                      .+|+..-.-.      +.+               ++         -.+...+.+|++|..||.+.+||-.+-+  ....+
T Consensus       393 ~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k--l~~~l  470 (503)
T KOG0282|consen  393 LHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK--LVSKL  470 (503)
T ss_pred             cCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh--hhhcc
Confidence            5554321100      000               00         0122236799999999999999977643  34567


Q ss_pred             ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       217 ~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      ++|.+++..+.|+|.   ....+|+||.||.|++|+
T Consensus       471 kah~~~ci~v~wHP~---e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  471 KAHDQPCIGVDWHPV---EPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             ccCCcceEEEEecCC---CcceeEecccCceeEecC
Confidence            899999999999997   577899999999999995

>KOG0302|consensus

Probab=99.94  E-value=5.4e-25  Score=187.34  Aligned_cols=219  Identities=19%  Similarity=0.374  Sum_probs=171.6

Q ss_pred             EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC--------------CcEEEEEEecCCCcCeEEEEeeCCCCC
Q psy2762          61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN--------------GNWFKYYEYNNHDSSVNSIAWAPKEFG  126 (318)
Q Consensus        61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~--------------~~~~~~~~~~~h~~~v~~v~~~p~~~~  126 (318)
                      ..-.|.+.++-++-.+-.+..+.||-+..|.|+||++..              ....+++++.+|...-+.++|+|-..+
T Consensus       146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g  225 (440)
T KOG0302|consen  146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG  225 (440)
T ss_pred             cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence            344688888777654333567889999999999999742              122467788899999999999996544


Q ss_pred             cEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc
Q psy2762         127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE  206 (318)
Q Consensus       127 ~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~  206 (318)
                       .+++|..-+.|.+|.+..+.-......+.+|+..|..+.|||..                ...||+||.|++|||||.+
T Consensus       226 -~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE----------------~~vfaScS~DgsIrIWDiR  288 (440)
T KOG0302|consen  226 -RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE----------------DGVFASCSCDGSIRIWDIR  288 (440)
T ss_pred             -ccccCccccceEeeeeccCceeecCccccccccchhhhccCCcc----------------CceEEeeecCceEEEEEec
Confidence             47788888999999886643222334566899999999999963                3579999999999999998


Q ss_pred             CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceee-EEeeecCCcEEEEEEcCC-CCEEE
Q psy2762         207 GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLT-GDILT  284 (318)
Q Consensus       207 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~-~~~~~~~~~v~~v~~spd-g~~l~  284 (318)
                      .++.......+.|...|+-|+|+..    -.+||+|+.||+++|||++.....+| ....-|..+|.+|.|+|. ...|+
T Consensus       289 s~~~~~~~~~kAh~sDVNVISWnr~----~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~ia  364 (440)
T KOG0302|consen  289 SGPKKAAVSTKAHNSDVNVISWNRR----EPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIA  364 (440)
T ss_pred             CCCccceeEeeccCCceeeEEccCC----cceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEE
Confidence            8743333344899999999999986    34899999999999999987553322 355678899999999995 46788


Q ss_pred             EEeCCCeEEEEEECCC
Q psy2762         285 VSCGDNSVSLWKENTD  300 (318)
Q Consensus       285 s~~~D~~v~iW~~~~~  300 (318)
                      ++|.|..|.|||+...
T Consensus       365 asg~D~QitiWDlsvE  380 (440)
T KOG0302|consen  365 ASGEDNQITIWDLSVE  380 (440)
T ss_pred             eccCCCcEEEEEeecc
Confidence            8899999999998663

>KOG1274|consensus

Probab=99.94  E-value=3.2e-24  Score=200.20  Aligned_cols=249  Identities=17%  Similarity=0.283  Sum_probs=190.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .-+|.+..+.++|.|+|..|++|+.||.|++|+.....+    .      -.++.-|...|.+++-    .+.+|++|+.
T Consensus         9 Ryaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e----~------P~ti~~~g~~v~~ia~----~s~~f~~~s~   74 (933)
T KOG1274|consen    9 RYAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEE----E------PETIDISGELVSSIAC----YSNHFLTGSE   74 (933)
T ss_pred             hhhccCceEEEEEcCCCCEEEEecCCCceEEeecCCccc----C------CchhhccCceeEEEee----cccceEEeec
Confidence            358999999999999999999999999999999763211    0      1122226777888874    2569999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      +++|.++.+.++..--  .+...+.++.+++|+-+  +.++|.|+.|-.|++.+.....   ..+.+++|..+|..+.|+
T Consensus        75 ~~tv~~y~fps~~~~~--iL~Rftlp~r~~~v~g~--g~~iaagsdD~~vK~~~~~D~s---~~~~lrgh~apVl~l~~~  147 (933)
T KOG1274|consen   75 QNTVLRYKFPSGEEDT--ILARFTLPIRDLAVSGS--GKMIAAGSDDTAVKLLNLDDSS---QEKVLRGHDAPVLQLSYD  147 (933)
T ss_pred             cceEEEeeCCCCCccc--eeeeeeccceEEEEecC--CcEEEeecCceeEEEEeccccc---hheeecccCCceeeeeEc
Confidence            9999999988765321  12334677999999987  7899999999999998764433   356778999999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE-c----cc-CCCCeeEEEEccCCCCCccEEEEE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-L----EN-HSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~-~----~~-h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      |.                 +..||+.+.||+|+||+++++.+..... +    +. .+..+..++|+|+    +..|+..
T Consensus       148 p~-----------------~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk----~g~la~~  206 (933)
T KOG1274|consen  148 PK-----------------GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPK----GGTLAVP  206 (933)
T ss_pred             CC-----------------CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCC----CCeEEee
Confidence            97                 5789999999999999998764321110 0    11 1345677999997    5678888


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +.|+.|++|+..++...-.-....+...+..++|+|.|+|||++.-||.|-|||.++
T Consensus       207 ~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t  263 (933)
T KOG1274|consen  207 PVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT  263 (933)
T ss_pred             ccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence            999999999988764211111122334589999999999999999999999999873

>KOG2096|consensus

Probab=99.93  E-value=1.6e-24  Score=181.04  Aligned_cols=270  Identities=19%  Similarity=0.308  Sum_probs=183.0

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCC---------CCC----------------CcceEEEEe-
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD---------SHS----------------QKGTLIAEL-   62 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~---------~~~----------------~~~~~~~~~-   62 (318)
                      +.||.+.|++++|+.||++|+|++.|++||||++.+-...+.         +.+                ..+..+..+ 
T Consensus        82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk  161 (420)
T KOG2096|consen   82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYK  161 (420)
T ss_pred             hhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEE
Confidence            469999999999999999999999999999999864222211         100                011111111 


Q ss_pred             ----------------------cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe
Q psy2762          63 ----------------------KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW  120 (318)
Q Consensus        63 ----------------------~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~  120 (318)
                                            +.|...|..+...  ..+.+|+|++.|.+|.||++. ++...  .+..-...-+..++
T Consensus       162 ~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA--~~~k~imsas~dt~i~lw~lk-Gq~L~--~idtnq~~n~~aav  236 (420)
T KOG2096|consen  162 LVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIA--GNAKYIMSASLDTKICLWDLK-GQLLQ--SIDTNQSSNYDAAV  236 (420)
T ss_pred             eeecccCCCCcccccccccccchhcccceEEEeec--CCceEEEEecCCCcEEEEecC-Cceee--eeccccccccceee
Confidence                                  1234444444432  347899999999999999998 44333  22222344556788


Q ss_pred             eCCCCCcEEEEeecCCeEEEEEeecCCC-Cc----ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec
Q psy2762         121 APKEFGLILACGSSDGTISFLTYMSDTN-SW----ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG  195 (318)
Q Consensus       121 ~p~~~~~~lasgs~d~~i~i~~~~~~~~-~~----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs  195 (318)
                      +|+  +.++|+++.---|++|.+...+. ..    ....+++|...|..++|+|+                 ...++|.|
T Consensus       237 SP~--GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~-----------------S~r~vtvS  297 (420)
T KOG2096|consen  237 SPD--GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNS-----------------STRAVTVS  297 (420)
T ss_pred             CCC--CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCC-----------------cceeEEEe
Confidence            999  78899998888899998754432 11    23457799999999999997                 46799999


Q ss_pred             CCCeEEEEEccCC-----eEE--EEE--Eccc-CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee
Q psy2762         196 CDNLIKIWKQEGD-----KWI--EET--KLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN  265 (318)
Q Consensus       196 ~d~~i~iwd~~~~-----~~~--~~~--~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~  265 (318)
                      .||++||||.+-+     .+.  ...  .+.. -.+++ .+..+|+    |..|| .+....++++..+..... +....
T Consensus       298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~----g~~lA-~s~gs~l~~~~se~g~~~-~~~e~  370 (420)
T KOG2096|consen  298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RLELSPS----GDSLA-VSFGSDLKVFASEDGKDY-PELED  370 (420)
T ss_pred             cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EEEeCCC----CcEEE-eecCCceEEEEcccCccc-hhHHH
Confidence            9999999996532     000  011  1111 12334 7899995    66665 445677999988774421 22233


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         266 TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       266 ~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      .|..-|.+++|+|||+++++.| |+.+|+.. |+.|.-..+.+|..
T Consensus       371 ~h~~~Is~is~~~~g~~~atcG-dr~vrv~~-ntpg~~~~V~~~~~  414 (420)
T KOG2096|consen  371 IHSTTISSISYSSDGKYIATCG-DRYVRVIR-NTPGWHSRVVKLNR  414 (420)
T ss_pred             hhcCceeeEEecCCCcEEeeec-ceeeeeec-CCCchhhHHHHhhc
Confidence            5778899999999999998765 89999996 66665555544443

>KOG0267|consensus

Probab=99.93  E-value=2.5e-26  Score=209.34  Aligned_cols=236  Identities=21%  Similarity=0.332  Sum_probs=197.2

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ...|...|.++..-..++.+++|+.|..+-+|.+...           ..+..|.+|..+|.++.|..  ...+|+.|+.
T Consensus        24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp-----------~~i~S~~~hespIeSl~f~~--~E~Llaagsa   90 (825)
T KOG0267|consen   24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP-----------NAITSLTGHESPIESLTFDT--SERLLAAGSA   90 (825)
T ss_pred             hhhhhhhhceeeeeccceeeccCCCceeeccccccCC-----------chhheeeccCCcceeeecCc--chhhhccccc
Confidence            3568889999998778899999999999999998633           34567999999999999964  4789999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      ||+||+||+..+..  +.++.+|...+.+|+|+|-  +.++|.|+.|+.+++||.+..   .......+|...+..+.|+
T Consensus        91 sgtiK~wDleeAk~--vrtLtgh~~~~~sv~f~P~--~~~~a~gStdtd~~iwD~Rk~---Gc~~~~~s~~~vv~~l~ls  163 (825)
T KOG0267|consen   91 SGTIKVWDLEEAKI--VRTLTGHLLNITSVDFHPY--GEFFASGSTDTDLKIWDIRKK---GCSHTYKSHTRVVDVLRLS  163 (825)
T ss_pred             CCceeeeehhhhhh--hhhhhccccCcceeeeccc--eEEeccccccccceehhhhcc---CceeeecCCcceeEEEeec
Confidence            99999999997753  3367799999999999998  789999999999999997522   2344556799899999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+                 |.++++|++|.+++|||+..++.  ..+|+.|...|..+.|+|.    ..++++||.|+++
T Consensus       164 P~-----------------Gr~v~~g~ed~tvki~d~~agk~--~~ef~~~e~~v~sle~hp~----e~Lla~Gs~d~tv  220 (825)
T KOG0267|consen  164 PD-----------------GRWVASGGEDNTVKIWDLTAGKL--SKEFKSHEGKVQSLEFHPL----EVLLAPGSSDRTV  220 (825)
T ss_pred             CC-----------------CceeeccCCcceeeeeccccccc--ccccccccccccccccCch----hhhhccCCCCcee
Confidence            97                 67999999999999999987764  4568899999999999995    7789999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      ++||+++..  .+.........|.+++|+|||..+++|.++
T Consensus       221 ~f~dletfe--~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  221 RFWDLETFE--VISSGKPETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             eeeccceeE--EeeccCCccCCceeeeecCCceeeecCchh
Confidence            999998632  122233446789999999999999888765

>KOG0270|consensus

Probab=99.93  E-value=2.2e-24  Score=187.00  Aligned_cols=247  Identities=20%  Similarity=0.312  Sum_probs=182.5

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCC-CC-----CCCC----cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKK-DD-----SHSQ----KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~-~~-----~~~~----~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .|+|+|.|..|-.|.|||++=.... +.     ..++    .++.-....+|++.|-+++|+. .-.+.|||||.|.+|+
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~-~~~nVLaSgsaD~TV~  269 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR-NFRNVLASGSADKTVK  269 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc-ccceeEEecCCCceEE
Confidence            4789999999999999998611000 00     0001    1111123457999999999964 3578999999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +||+.++++..  ++..|...|.+++|+|.+ ..++++|+.|++|.+.|.+.......  .+ .....|..++|.|..  
T Consensus       270 lWD~~~g~p~~--s~~~~~k~Vq~l~wh~~~-p~~LLsGs~D~~V~l~D~R~~~~s~~--~w-k~~g~VEkv~w~~~s--  341 (463)
T KOG0270|consen  270 LWDVDTGKPKS--SITHHGKKVQTLEWHPYE-PSVLLSGSYDGTVALKDCRDPSNSGK--EW-KFDGEVEKVAWDPHS--  341 (463)
T ss_pred             EEEcCCCCcce--ehhhcCCceeEEEecCCC-ceEEEeccccceEEeeeccCccccCc--eE-EeccceEEEEecCCC--
Confidence            99999998544  456789999999999987 57899999999999999864322111  11 223467888998863  


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                                    -..+.++..||+||=+|++... .+..++..|.+.|.+|++++.   ...+++|+|.|+.|++|++
T Consensus       342 --------------e~~f~~~tddG~v~~~D~R~~~-~~vwt~~AHd~~ISgl~~n~~---~p~~l~t~s~d~~Vklw~~  403 (463)
T KOG0270|consen  342 --------------ENSFFVSTDDGTVYYFDIRNPG-KPVWTLKAHDDEISGLSVNIQ---TPGLLSTASTDKVVKLWKF  403 (463)
T ss_pred             --------------ceeEEEecCCceEEeeecCCCC-CceeEEEeccCCcceEEecCC---CCcceeeccccceEEEEee
Confidence                          2578899999999999988653 356778899999999999986   4678999999999999998


Q ss_pred             CCCcceeeEEeeec---CCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCC
Q psy2762         254 NDYVTWTPFIMNTF---DDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       254 ~~~~~~~~~~~~~~---~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~  300 (318)
                      .....   .....|   -+...+.++.|+-. .||.||..+.+||||+-+.
T Consensus       404 ~~~~~---~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  404 DVDSP---KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             cCCCC---cccccccccccceeecccCCCcceEEEecCccceEEEeecccC
Confidence            76442   111111   13467778888754 4667777778999997654

>KOG0275|consensus

Probab=99.93  E-value=2.4e-25  Score=186.36  Aligned_cols=242  Identities=17%  Similarity=0.219  Sum_probs=191.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -|.+.|.|+.|+.|...||||+.||.|+||.+.           +|.+++.+. +|+..|+|+.|+.  |+..+.|+|.|
T Consensus       261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~-----------tG~ClRrFdrAHtkGvt~l~FSr--D~SqiLS~sfD  327 (508)
T KOG0275|consen  261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE-----------TGQCLRRFDRAHTKGVTCLSFSR--DNSQILSASFD  327 (508)
T ss_pred             ecccceEEEeecccHHHhhccCcCCcEEEEEEe-----------cchHHHHhhhhhccCeeEEEEcc--Ccchhhccccc
Confidence            578899999999999999999999999999996           467888886 9999999999984  58899999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccccceeee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAVSW  167 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~  167 (318)
                      .+++|--+.++++  ...+.+|.+.|+.+.|+++  +..+++++.||+|++|+.....   .....+  +...+|+.+-.
T Consensus       328 ~tvRiHGlKSGK~--LKEfrGHsSyvn~a~ft~d--G~~iisaSsDgtvkvW~~Ktte---C~~Tfk~~~~d~~vnsv~~  400 (508)
T KOG0275|consen  328 QTVRIHGLKSGKC--LKEFRGHSSYVNEATFTDD--GHHIISASSDGTVKVWHGKTTE---CLSTFKPLGTDYPVNSVIL  400 (508)
T ss_pred             ceEEEeccccchh--HHHhcCccccccceEEcCC--CCeEEEecCCccEEEecCcchh---hhhhccCCCCcccceeEEE
Confidence            9999999988874  4467899999999999998  7789999999999999753322   111222  33345666665


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC--CCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH--SDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      -|..                ..+++.+...++|.|-++++ +.+.... .|.  .+.--+.+.||.    |..+...++|
T Consensus       401 ~PKn----------------peh~iVCNrsntv~imn~qG-QvVrsfs-SGkREgGdFi~~~lSpk----GewiYcigED  458 (508)
T KOG0275|consen  401 LPKN----------------PEHFIVCNRSNTVYIMNMQG-QVVRSFS-SGKREGGDFINAILSPK----GEWIYCIGED  458 (508)
T ss_pred             cCCC----------------CceEEEEcCCCeEEEEeccc-eEEeeec-cCCccCCceEEEEecCC----CcEEEEEccC
Confidence            5532                24688899999999999875 3333322 121  222345578895    8899999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      +.+.-+....+.  ....++.|+..|..++-+|..+.||+-++||.+++|.
T Consensus       459 ~vlYCF~~~sG~--LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  459 GVLYCFSVLSGK--LERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             cEEEEEEeecCc--eeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            999999876654  2345667888888999999999999999999999995

>KOG0647|consensus

Probab=99.92  E-value=1.8e-23  Score=173.50  Aligned_cols=235  Identities=14%  Similarity=0.199  Sum_probs=176.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..|.++|.+++|+.||..+++|+.|+.+++||+.++            .+..+..|.++|..++|.....-..|++||+|
T Consensus        69 ~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~------------Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWD  136 (347)
T KOG0647|consen   69 QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG------------QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWD  136 (347)
T ss_pred             hccCCCeEEEEEccCCceEEeeccCCceEEEEccCC------------CeeeeeecccceeEEEEecCCCcceeEecccc
Confidence            358999999999999999999999999999999742            45677889999999999765444589999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceeeeC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWG  168 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~~  168 (318)
                      +++|.||.++...+.+..+   ++.|++...-.    .+++.+..+..|.++++..+...  .+.+.. -.--+.+++..
T Consensus       137 KTlKfWD~R~~~pv~t~~L---PeRvYa~Dv~~----pm~vVata~r~i~vynL~n~~te--~k~~~SpLk~Q~R~va~f  207 (347)
T KOG0647|consen  137 KTLKFWDTRSSNPVATLQL---PERVYAADVLY----PMAVVATAERHIAVYNLENPPTE--FKRIESPLKWQTRCVACF  207 (347)
T ss_pred             cceeecccCCCCeeeeeec---cceeeehhccC----ceeEEEecCCcEEEEEcCCCcch--hhhhcCcccceeeEEEEE
Confidence            9999999987765554444   46788877664    36778888999999988554321  111110 01113445544


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC---------CCeeEEEEccCCCCCccEE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS---------DWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~---------~~V~~v~~sp~~~~~~~~l  239 (318)
                      ++.                 .-.|.||-.|.+-|..+..+.+...++|+-|.         ..|++|+|+|.    -..|
T Consensus       208 ~d~-----------------~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~----hgtl  266 (347)
T KOG0647|consen  208 QDK-----------------DGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPV----HGTL  266 (347)
T ss_pred             ecC-----------------CceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecc----cceE
Confidence            432                 23588999999999988764334456666665         35889999996    4579


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      +|+|.||+..+||..-..  .+...+.|.++|..++|+.+|.++|-+..
T Consensus       267 vTaGsDGtf~FWDkdar~--kLk~s~~~~qpItcc~fn~~G~ifaYA~g  313 (347)
T KOG0647|consen  267 VTAGSDGTFSFWDKDART--KLKTSETHPQPITCCSFNRNGSIFAYALG  313 (347)
T ss_pred             EEecCCceEEEecchhhh--hhhccCcCCCccceeEecCCCCEEEEEee
Confidence            999999999999976533  23344578899999999999999987743

>KOG1538|consensus

Probab=99.92  E-value=5.9e-24  Score=192.45  Aligned_cols=236  Identities=22%  Similarity=0.362  Sum_probs=179.5

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .|+.++|-|||..|+-+. +..+-|||.+           .|.++.++++|.+.|++++|++  +|++||||+.|+.|++
T Consensus        14 ci~d~afkPDGsqL~lAA-g~rlliyD~n-----------dG~llqtLKgHKDtVycVAys~--dGkrFASG~aDK~VI~   79 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAA-GSRLLVYDTS-----------DGTLLQPLKGHKDTVYCVAYAK--DGKRFASGSADKSVII   79 (1081)
T ss_pred             chheeEECCCCceEEEec-CCEEEEEeCC-----------CcccccccccccceEEEEEEcc--CCceeccCCCceeEEE
Confidence            899999999999888765 5689999987           3578899999999999999985  5999999999999999


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc--cccccceeeeCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA--HTIGCNAVSWGPGIG  172 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~  172 (318)
                      |+..-..   +.++ .|+..|.|..|+|-  .+.+++++-. ...+|.....       .+..  ....|.+++|..+  
T Consensus        80 W~~klEG---~LkY-SH~D~IQCMsFNP~--~h~LasCsLs-dFglWS~~qK-------~V~K~kss~R~~~CsWtnD--  143 (1081)
T KOG1538|consen   80 WTSKLEG---ILKY-SHNDAIQCMSFNPI--THQLASCSLS-DFGLWSPEQK-------SVSKHKSSSRIICCSWTND--  143 (1081)
T ss_pred             ecccccc---eeee-ccCCeeeEeecCch--HHHhhhcchh-hccccChhhh-------hHHhhhhheeEEEeeecCC--
Confidence            9865433   2233 48999999999998  5567777654 2456754221       1111  2346788999876  


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC------------------
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL------------------  234 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~------------------  234 (318)
                                     |++||.|-.||+|.|-+....+...+..-.|.+++|.+|+|+|..+.                  
T Consensus       144 ---------------GqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy  208 (1081)
T KOG1538|consen  144 ---------------GQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFY  208 (1081)
T ss_pred             ---------------CcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEE
Confidence                           68999999999999998665554444555668899999999995321                  


Q ss_pred             ------------------------CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         235 ------------------------SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       235 ------------------------~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                                              +|.++..||.|+.+++|.-++-+   ...+..++.+||+|+..|++++++.|+.||
T Consensus       209 ~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~Gvr---LGTvg~~D~WIWtV~~~PNsQ~v~~GCqDG  285 (1081)
T KOG1538|consen  209 QLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGVR---LGTVGEQDSWIWTVQAKPNSQYVVVGCQDG  285 (1081)
T ss_pred             EecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeecCeE---EeeccccceeEEEEEEccCCceEEEEEccC
Confidence                                    45566666666666666554422   223334678999999999999999999999


Q ss_pred             eEEEEEEC
Q psy2762         291 SVSLWKEN  298 (318)
Q Consensus       291 ~v~iW~~~  298 (318)
                      |+-.+++-
T Consensus       286 TiACyNl~  293 (1081)
T KOG1538|consen  286 TIACYNLI  293 (1081)
T ss_pred             eeehhhhH
Confidence            99999853

>KOG0973|consensus

Probab=99.92  E-value=1.5e-23  Score=199.00  Aligned_cols=231  Identities=23%  Similarity=0.375  Sum_probs=166.7

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCC----CcC---CCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDR----NLK---KDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~----~~~---~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      .-|.+.|+|+.|+|||+|||+||.|+.|.||..+.    ..-   ......+.++.+..+.+|...|..+.|++  ++.+
T Consensus        66 ~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp--~~~~  143 (942)
T KOG0973|consen   66 DDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP--DDSL  143 (942)
T ss_pred             ccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC--CccE
Confidence            46999999999999999999999999999999862    000   01122345678899999999999999974  5899


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee-ecccc--
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHT--  159 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~-~~~h~--  159 (318)
                      |||+|.|++|.|||..+-.  ....+.+|.+.|..++|.|-  ++++|+-+.|++|++|+...    |...+ +..+.  
T Consensus       144 lvS~s~DnsViiwn~~tF~--~~~vl~~H~s~VKGvs~DP~--Gky~ASqsdDrtikvwrt~d----w~i~k~It~pf~~  215 (942)
T KOG0973|consen  144 LVSVSLDNSVIIWNAKTFE--LLKVLRGHQSLVKGVSWDPI--GKYFASQSDDRTLKVWRTSD----WGIEKSITKPFEE  215 (942)
T ss_pred             EEEecccceEEEEccccce--eeeeeecccccccceEECCc--cCeeeeecCCceEEEEEccc----ceeeEeeccchhh
Confidence            9999999999999987653  55567899999999999998  88999999999999998532    11111 11111  


Q ss_pred             ----cccceeeeCCCCCCCc----------cc------------cc----------------------cCCCCCCcc--c
Q psy2762         160 ----IGCNAVSWGPGIGSLS----------EL------------DL----------------------KGSKLGGVA--K  189 (318)
Q Consensus       160 ----~~v~~~~~~p~~~~~~----------~~------------~~----------------------~~~~~~~~~--~  189 (318)
                          .-...++|||++..+-          .+            ++                      ++.....+.  .
T Consensus       216 ~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~  295 (942)
T KOG0973|consen  216 SPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYC  295 (942)
T ss_pred             CCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceE
Confidence                1234566666532210          00            00                      000000000  1


Q ss_pred             eEEEecCCCeEEEEEccCCeEEEEEEc-ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762         190 RLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       190 ~lasgs~d~~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                      .+|+||.|++|-||......+  .... +-.+..|.+++|+|+    |..|..||.||+|.+..+++.
T Consensus       296 i~AvgSqDrSlSVW~T~~~RP--l~vi~~lf~~SI~DmsWspd----G~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  296 IAAVGSQDRSLSVWNTALPRP--LFVIHNLFNKSIVDMSWSPD----GFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             EEEEecCCccEEEEecCCCCc--hhhhhhhhcCceeeeeEcCC----CCeEEEEecCCeEEEEEcchH
Confidence            589999999999998754432  2221 223456999999996    889999999999999988763

>KOG0641|consensus

Probab=99.92  E-value=6.2e-22  Score=158.55  Aligned_cols=256  Identities=21%  Similarity=0.267  Sum_probs=188.2

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC---CCCCCC-cceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK---DDSHSQ-KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~---~~~~~~-~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .-.|++++|.|.|.+.+.||..++.||-....-...   ++..-+ ...+.+.-+-|.+.|+|.+|++  +|+++|+|+.
T Consensus        32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~--~geliatgsn  109 (350)
T KOG0641|consen   32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP--CGELIATGSN  109 (350)
T ss_pred             hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC--ccCeEEecCC
Confidence            457899999999999999999999999864311110   011111 1234456678999999999974  5999999999


Q ss_pred             CCeEEEEeCCCCcE---EEEEEecCCCcCeEEEEeeCCC--CCcEEEEeec-CCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          89 DRKVIIWRGDNGNW---FKYYEYNNHDSSVNSIAWAPKE--FGLILACGSS-DGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        89 Dg~v~vWd~~~~~~---~~~~~~~~h~~~v~~v~~~p~~--~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      |++|++-.+....+   -.-.++..|.+.|..++|-.+.  .+.++++++. |..|.+-|-  +..+ ..+.+.+|+..+
T Consensus       110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc--~~g~-~~~a~sghtghi  186 (350)
T KOG0641|consen  110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDC--GRGQ-GFHALSGHTGHI  186 (350)
T ss_pred             CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeec--CCCC-cceeecCCcccE
Confidence            99999987654322   1234567899999999997432  2456666544 444444333  3322 245677888887


Q ss_pred             cee-eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC-----CCCeeEEEEccCCCCCc
Q psy2762         163 NAV-SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH-----SDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       163 ~~~-~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h-----~~~V~~v~~sp~~~~~~  236 (318)
                      ..+ +|+                   +..|++||+|.+||+||++-+.++....-.-|     ...|..|+..|.    |
T Consensus       187 lalyswn-------------------~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdps----g  243 (350)
T KOG0641|consen  187 LALYSWN-------------------GAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPS----G  243 (350)
T ss_pred             EEEEEec-------------------CcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCC----c
Confidence            665 354                   34799999999999999886655433221112     256999999996    8


Q ss_pred             cEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         237 CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       237 ~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ++|++|-.|....+||+.+.+  ......+|...|.+|.|||...+|++++.|..+++=|+.
T Consensus       244 rll~sg~~dssc~lydirg~r--~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  244 RLLASGHADSSCMLYDIRGGR--MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             ceeeeccCCCceEEEEeeCCc--eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence            999999999999999998865  355667899999999999999999999999999998753

>KOG0772|consensus

Probab=99.92  E-value=8.3e-24  Score=186.48  Aligned_cols=219  Identities=16%  Similarity=0.208  Sum_probs=158.1

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE--EEEEEec-CCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW--FKYYEYN-NHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~--~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      .....+++|+..|.++++.+  .|.+|+|||.|-+|++||++.-.-  .....+. --...|++++|++..  ..+++.+
T Consensus       158 shEi~l~hgtk~Vsal~~Dp--~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg--~~iLvvs  233 (641)
T KOG0772|consen  158 SHEIQLKHGTKIVSALAVDP--SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTG--DQILVVS  233 (641)
T ss_pred             cceEeccCCceEEEEeeecC--CCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCC--CeEEEEe
Confidence            34567899999999999964  499999999999999999875321  0111121 223469999999984  3445555


Q ss_pred             cCCeEEEEEeecCCC----------CcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762         134 SDGTISFLTYMSDTN----------SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW  203 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw  203 (318)
                      ...+++++|-. +..          ......-++|...+++..|+|..                -..|+|++.|+++|||
T Consensus       234 g~aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~----------------k~~FlT~s~DgtlRiW  296 (641)
T KOG0772|consen  234 GSAQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN----------------KEEFLTCSYDGTLRIW  296 (641)
T ss_pred             cCcceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCc----------------ccceEEecCCCcEEEE
Confidence            56678887631 211          00112235899999999999963                3569999999999999


Q ss_pred             EccCCeEEEEEEc-----ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee-eEEeeecCC--cEEEEE
Q psy2762         204 KQEGDKWIEETKL-----ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT-PFIMNTFDD--VVWNVS  275 (318)
Q Consensus       204 d~~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~-~~~~~~~~~--~v~~v~  275 (318)
                      |+..-+ .+...+     .+..-+++.+.|+|+    +..||.|+.||.|++|+........ ......|..  .|.+|+
T Consensus       297 dv~~~k-~q~qVik~k~~~g~Rv~~tsC~~nrd----g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~  371 (641)
T KOG0772|consen  297 DVNNTK-SQLQVIKTKPAGGKRVPVTSCAWNRD----GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSIS  371 (641)
T ss_pred             ecCCch-hheeEEeeccCCCcccCceeeecCCC----cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEE
Confidence            976432 122222     334456899999996    8889999999999999975532211 122345665  899999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         276 WSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       276 ~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ||+||++|+|-|.|+++++||++-..
T Consensus       372 FS~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  372 FSYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             eccccchhhhccCCCceeeeeccccc
Confidence            99999999999999999999986643

>KOG1408|consensus

Probab=99.92  E-value=1.1e-23  Score=191.95  Aligned_cols=251  Identities=20%  Similarity=0.221  Sum_probs=195.0

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC-CCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ-FGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~~~~las~s~D   89 (318)
                      +..-.+++++++|+|++||+|..-|++|||++..           -.....+++|..+|.|+.|+.|. ..++|||+|.|
T Consensus       457 d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~-----------l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrd  525 (1080)
T KOG1408|consen  457 DSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE-----------LEYTCFMEAHESEILCLEYSFPVLTNKLLASASRD  525 (1080)
T ss_pred             CcccceEEEEECCCcceecccCccCceEEEEehh-----------hhhhhheecccceeEEEeecCchhhhHhhhhccCC
Confidence            4567899999999999999999999999999962           23456778999999999998663 25799999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc-----ccce
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-----GCNA  164 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~-----~v~~  164 (318)
                      +.|.|+|+.. .+...+++.+|.+.|++|.|.-.+-+..+++++.|+.|.+- .....  .....+..|+.     .+..
T Consensus       526 RlIHV~Dv~r-ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr-~~qk~--~~g~~f~r~t~t~~ktTlYD  601 (1080)
T KOG1408|consen  526 RLIHVYDVKR-NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFR-VNQKA--SSGRLFPRHTQTLSKTTLYD  601 (1080)
T ss_pred             ceEEEEeccc-ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhee-hhccc--cCceeccccccccccceEEE
Confidence            9999999864 35566778899999999999977555788899999987552 21111  11222222222     1233


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE-cccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-LENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      ++..|.                 .++++++.+|+.||||+.+.++....++ -.+|.+..-.|...|.    |-|||+.+
T Consensus       602 m~Vdp~-----------------~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPS----giY~atSc  660 (1080)
T KOG1408|consen  602 MAVDPT-----------------SKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPS----GIYLATSC  660 (1080)
T ss_pred             eeeCCC-----------------cceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCC----ccEEEEee
Confidence            333342                 4689999999999999999886543332 2346566778889995    88999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|+++.++|.....+  .....+|.+.|..+.|.+|-+.|.|++.||.+.||++-.
T Consensus       661 sdktl~~~Df~sgEc--vA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  661 SDKTLCFVDFVSGEC--VAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             cCCceEEEEeccchh--hhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            999999999877543  345678999999999999999999999999999999654

>KOG0305|consensus

Probab=99.92  E-value=8.3e-23  Score=184.76  Aligned_cols=233  Identities=24%  Similarity=0.398  Sum_probs=180.6

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD   98 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~   98 (318)
                      ++++ ..+.|+.| ....|.+|+..+           +.+......+...|+++.|+.  +|.+||.|..+|+|.|||..
T Consensus       183 ldWs-s~n~laVa-lg~~vylW~~~s-----------~~v~~l~~~~~~~vtSv~ws~--~G~~LavG~~~g~v~iwD~~  247 (484)
T KOG0305|consen  183 LDWS-SANVLAVA-LGQSVYLWSASS-----------GSVTELCSFGEELVTSVKWSP--DGSHLAVGTSDGTVQIWDVK  247 (484)
T ss_pred             hhcc-cCCeEEEE-ecceEEEEecCC-----------CceEEeEecCCCceEEEEECC--CCCEEEEeecCCeEEEEehh
Confidence            4555 33455554 366899999863           233333344488999999974  59999999999999999987


Q ss_pred             CCcEEEEEEecC-CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccc
Q psy2762          99 NGNWFKYYEYNN-HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSEL  177 (318)
Q Consensus        99 ~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~  177 (318)
                      ..+  .+..+.+ |...|.+++|+.    .++.+|+.|+.|..+|++.....  ...+.+|...|+.+.|+++       
T Consensus       248 ~~k--~~~~~~~~h~~rvg~laW~~----~~lssGsr~~~I~~~dvR~~~~~--~~~~~~H~qeVCgLkws~d-------  312 (484)
T KOG0305|consen  248 EQK--KTRTLRGSHASRVGSLAWNS----SVLSSGSRDGKILNHDVRISQHV--VSTLQGHRQEVCGLKWSPD-------  312 (484)
T ss_pred             hcc--ccccccCCcCceeEEEeccC----ceEEEecCCCcEEEEEEecchhh--hhhhhcccceeeeeEECCC-------
Confidence            654  3445666 999999999994    47999999999999998765432  1236689999999999997       


Q ss_pred             cccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe--CCCeEEEEEcCC
Q psy2762         178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--QDRKVIIWTSND  255 (318)
Q Consensus       178 ~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--~D~~i~vw~~~~  255 (318)
                                +.+||+|+.|+.+.|||....+  +...+..|...|..++|+|-   ...+||+|+  .|+.|++|+...
T Consensus       313 ----------~~~lASGgnDN~~~Iwd~~~~~--p~~~~~~H~aAVKA~awcP~---q~~lLAsGGGs~D~~i~fwn~~~  377 (484)
T KOG0305|consen  313 ----------GNQLASGGNDNVVFIWDGLSPE--PKFTFTEHTAAVKALAWCPW---QSGLLATGGGSADRCIKFWNTNT  377 (484)
T ss_pred             ----------CCeeccCCCccceEeccCCCcc--ccEEEeccceeeeEeeeCCC---ccCceEEcCCCcccEEEEEEcCC
Confidence                      5799999999999999985443  45678899999999999996   466888876  699999999886


Q ss_pred             CcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC--CCeEEEEEECC
Q psy2762         256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG--DNSVSLWKENT  299 (318)
Q Consensus       256 ~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~--D~~v~iW~~~~  299 (318)
                      ...  . ....-...|.++.|+|..+.|+++..  ++.|+||+...
T Consensus       378 g~~--i-~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps  420 (484)
T KOG0305|consen  378 GAR--I-DSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS  420 (484)
T ss_pred             CcE--e-cccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc
Confidence            431  1 11122468999999999988888753  67999999644

>KOG0269|consensus

Probab=99.92  E-value=9.8e-24  Score=193.79  Aligned_cols=253  Identities=19%  Similarity=0.306  Sum_probs=185.4

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc---ccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH---SGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h---~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      ....++..+++-..|+.+|. -.++||.++.....       -++....+.-   .-....|.|. ..+.++||+++..|
T Consensus        40 ~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~-------~~~~~~~k~kqn~~~S~~DVkW~-~~~~NlIAT~s~nG  110 (839)
T KOG0269|consen   40 AKANAISVNRDINQIVVAGR-SLLKLYAINPNDFS-------EKCNHRFKTKQNKFYSAADVKWG-QLYSNLIATCSTNG  110 (839)
T ss_pred             cccceEeecCCcceeEEecc-cceeeEeeCcccCC-------cceeeecccccceeeehhhcccc-cchhhhheeecCCC
Confidence            34566777888888887775 48899987632111       0111111110   1123456775 44689999999999


Q ss_pred             eEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          91 KVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        91 ~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      .|.+||+... +..+.+.+..|+..++++.|++.+ ..+|++|+.||+|++||++..+.   .....+....+..|.|+|
T Consensus       111 ~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~te-p~iliSGSQDg~vK~~DlR~~~S---~~t~~~nSESiRDV~fsp  186 (839)
T KOG0269|consen  111 VISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTE-PNILISGSQDGTVKCWDLRSKKS---KSTFRSNSESIRDVKFSP  186 (839)
T ss_pred             cEEEEecCccccchhhhHhhhhccceeeeeeccCC-ccEEEecCCCceEEEEeeecccc---cccccccchhhhceeecc
Confidence            9999998752 223445677899999999999987 46899999999999999976553   223445667789999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      ..                +.+|+++...|.+++||++.-. .....+.+|+++|.|+.|+|+    +.+|||||.|+.|+
T Consensus       187 ~~----------------~~~F~s~~dsG~lqlWDlRqp~-r~~~k~~AH~GpV~c~nwhPn----r~~lATGGRDK~vk  245 (839)
T KOG0269|consen  187 GY----------------GNKFASIHDSGYLQLWDLRQPD-RCEKKLTAHNGPVLCLNWHPN----REWLATGGRDKMVK  245 (839)
T ss_pred             CC----------------CceEEEecCCceEEEeeccCch-hHHHHhhcccCceEEEeecCC----CceeeecCCCccEE
Confidence            63                4789999999999999987532 234567899999999999995    88999999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCE-EEEEe--CCCeEEEEEECCCC
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDI-LTVSC--GDNSVSLWKENTDG  301 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~-l~s~~--~D~~v~iW~~~~~~  301 (318)
                      ||+..+.+....... .-..+|..|.|=|+.++ ||+.+  .|..|+|||+...+
T Consensus       246 iWd~t~~~~~~~~tI-nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPY  299 (839)
T KOG0269|consen  246 IWDMTDSRAKPKHTI-NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPY  299 (839)
T ss_pred             EEeccCCCccceeEE-eecceeeeeeeccCccchhhhhhccccceEEEEeecccc
Confidence            999886543222122 12468999999998766 55554  48899999987654

>KOG1063|consensus

Probab=99.91  E-value=5.8e-23  Score=186.70  Aligned_cols=274  Identities=22%  Similarity=0.425  Sum_probs=190.5

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcce-----EEEEecccccCeEEEEecCCCCC
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGT-----LIAELKGHSGPVWQVAWAHPQFG   80 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~-----~~~~~~~h~~~V~~v~~~~~~~~   80 (318)
                      ..+.-||++.|+++.++|.+..|+|+|.|+++.||..++.         +|.     .+..+.+..+.-++..|++  ++
T Consensus       260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~---------tGiWv~~vRlGe~gg~a~GF~g~lw~~--n~  328 (764)
T KOG1063|consen  260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDEN---------TGIWVDVVRLGEVGGSAGGFWGGLWSP--NS  328 (764)
T ss_pred             hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCc---------cceEEEEEEeecccccccceeeEEEcC--CC
Confidence            3456799999999999999999999999999999986532         222     2334445556788999974  47


Q ss_pred             cEEEEEECCCeEEEEeC-CCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---
Q psy2762          81 TLLASCSYDRKVIIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---  156 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---  156 (318)
                      +.+++-|.-|-.++|.- +...+.+.....||...|.+|+|.|.  +.++.+.+.|.+-|++-..-+...|  .++.   
T Consensus       329 ~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~ps--GeflLsvs~DQTTRlFa~wg~q~~w--HEiaRPQ  404 (764)
T KOG1063|consen  329 NVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPS--GEFLLSVSLDQTTRLFARWGRQQEW--HEIARPQ  404 (764)
T ss_pred             CEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCC--CCEEEEeccccceeeecccccccce--eeecccc
Confidence            88999999999999983 33345555556799999999999998  7789999999999986543111111  1111   


Q ss_pred             ccccccceeeeCCCC-----------------------------C--------------------------C-----Ccc
Q psy2762         157 AHTIGCNAVSWGPGI-----------------------------G--------------------------S-----LSE  176 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~-----------------------------~--------------------------~-----~~~  176 (318)
                      .|.-...++++-+..                             +                          +     +..
T Consensus       405 iHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~  484 (764)
T KOG1063|consen  405 IHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGE  484 (764)
T ss_pred             cccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccc
Confidence            122222333322200                             0                          0     000


Q ss_pred             ------cc-------ccCCC----------------------------CCCccceEEEecCCC-----eEEEEEccCCeE
Q psy2762         177 ------LD-------LKGSK----------------------------LGGVAKRLVSGGCDN-----LIKIWKQEGDKW  210 (318)
Q Consensus       177 ------~~-------~~~~~----------------------------~~~~~~~lasgs~d~-----~i~iwd~~~~~~  210 (318)
                            ..       +...+                            .+..++.+||+....     .|++|+..+  +
T Consensus       485 ~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~--W  562 (764)
T KOG1063|consen  485 AAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN--W  562 (764)
T ss_pred             cceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc--h
Confidence                  00       00000                            011134566553332     689998654  4


Q ss_pred             EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         211 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       211 ~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      .+...+++|.-.|+.+.|||+    +++|+++|.|+++.+|+..+....  .-.....|...||+++|+||+.++|++|+
T Consensus       563 ~~~~~L~~HsLTVT~l~FSpd----g~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSR  638 (764)
T KOG1063|consen  563 LQVQELEGHSLTVTRLAFSPD----GRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASR  638 (764)
T ss_pred             hhhheecccceEEEEEEECCC----CcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecC
Confidence            455678999999999999996    999999999999999987653311  11224578889999999999999999999


Q ss_pred             CCeEEEEEECCC
Q psy2762         289 DNSVSLWKENTD  300 (318)
Q Consensus       289 D~~v~iW~~~~~  300 (318)
                      |++|.+|.+...
T Consensus       639 DK~VkVW~~~~~  650 (764)
T KOG1063|consen  639 DKKVKVWEEPDL  650 (764)
T ss_pred             CceEEEEeccCc
Confidence            999999997664

>KOG1036|consensus

Probab=99.91  E-value=8.3e-23  Score=170.06  Aligned_cols=245  Identities=17%  Similarity=0.159  Sum_probs=177.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      -.++.|.++.|+|.+..|+.++.||++++||++..            .+...-.|..++.+++|. +  ...+++|+.||
T Consensus        11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~------------~l~~~~~~~~plL~c~F~-d--~~~~~~G~~dg   75 (323)
T KOG1036|consen   11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN------------SLKLKFKHGAPLLDCAFA-D--ESTIVTGGLDG   75 (323)
T ss_pred             CChhceeeEEEcCcCCcEEEEeccCcEEEEeccch------------hhhhheecCCceeeeecc-C--CceEEEeccCc
Confidence            45789999999999999888999999999998621            122233589999999995 3  57899999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .|+.+|+.++..   ..+..|..+|.||..++-  ...+++|+.|++|++||.+.....   ... .....|.++..+  
T Consensus        76 ~vr~~Dln~~~~---~~igth~~~i~ci~~~~~--~~~vIsgsWD~~ik~wD~R~~~~~---~~~-d~~kkVy~~~v~--  144 (323)
T KOG1036|consen   76 QVRRYDLNTGNE---DQIGTHDEGIRCIEYSYE--VGCVISGSWDKTIKFWDPRNKVVV---GTF-DQGKKVYCMDVS--  144 (323)
T ss_pred             eEEEEEecCCcc---eeeccCCCceEEEEeecc--CCeEEEcccCccEEEEeccccccc---ccc-ccCceEEEEecc--
Confidence            999999988753   234569999999999986  346889999999999998642110   000 111234444332  


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +..|+.|..|..|.+||+++........-..-+..++||++-|+    +.=.+.+|-||.|.+
T Consensus       145 -----------------g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn----~eGy~~sSieGRVav  203 (323)
T KOG1036|consen  145 -----------------GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPN----GEGYVVSSIEGRVAV  203 (323)
T ss_pred             -----------------CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecC----CCceEEEeecceEEE
Confidence                             35799999999999999987643222222345667999999995    344778899999988


Q ss_pred             EEcCCCcceee--EEeeec---------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         251 WTSNDYVTWTP--FIMNTF---------DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       251 w~~~~~~~~~~--~~~~~~---------~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      =.++...+.+.  .....|         --+|++++|+|-.+.||||+.||.|.+||......
T Consensus       204 E~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKr  266 (323)
T KOG1036|consen  204 EYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKR  266 (323)
T ss_pred             EccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhh
Confidence            65554311000  111111         13799999999988999999999999999766533

>KOG0283|consensus

Probab=99.91  E-value=2.5e-23  Score=193.04  Aligned_cols=205  Identities=20%  Similarity=0.280  Sum_probs=156.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.||.+-|.++.|+.++ +|+|+|.|+|||||++..           ..++++|. |++.|+||+| +|.|.++|+||+
T Consensus       364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-----------~~CL~~F~-HndfVTcVaF-nPvDDryFiSGS  429 (712)
T KOG0283|consen  364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-----------KECLKVFS-HNDFVTCVAF-NPVDDRYFISGS  429 (712)
T ss_pred             hhhccchhheecccccCC-eeEeccccccEEeecCCC-----------cceeeEEe-cCCeeEEEEe-cccCCCcEeecc
Confidence            567999999999998775 788999999999999863           35677664 9999999999 567899999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-------cccc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-------AHTI  160 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-------~h~~  160 (318)
                      .|+.||||++...+.+. +  ..-..-|++++|.|+  |+.++.|+.+|.+++|+.....- .....+.       .|. 
T Consensus       430 LD~KvRiWsI~d~~Vv~-W--~Dl~~lITAvcy~Pd--Gk~avIGt~~G~C~fY~t~~lk~-~~~~~I~~~~~Kk~~~~-  502 (712)
T KOG0283|consen  430 LDGKVRLWSISDKKVVD-W--NDLRDLITAVCYSPD--GKGAVIGTFNGYCRFYDTEGLKL-VSDFHIRLHNKKKKQGK-  502 (712)
T ss_pred             cccceEEeecCcCeeEe-e--hhhhhhheeEEeccC--CceEEEEEeccEEEEEEccCCeE-EEeeeEeeccCccccCc-
Confidence            99999999998654322 2  223478999999999  88999999999999998643221 0111111       233 


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCC--eeEEEEccCCCCCccE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW--VRDVAWAPSWGLSKCM  238 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~--V~~v~~sp~~~~~~~~  238 (318)
                      .|+.+.|.|..                ...++..+.|..|||+|.....+  ...|+|+...  -..-.|+.+    |.+
T Consensus       503 rITG~Q~~p~~----------------~~~vLVTSnDSrIRI~d~~~~~l--v~KfKG~~n~~SQ~~Asfs~D----gk~  560 (712)
T KOG0283|consen  503 RITGLQFFPGD----------------PDEVLVTSNDSRIRIYDGRDKDL--VHKFKGFRNTSSQISASFSSD----GKH  560 (712)
T ss_pred             eeeeeEecCCC----------------CCeEEEecCCCceEEEeccchhh--hhhhcccccCCcceeeeEccC----CCE
Confidence            68888888753                13577889999999999865543  3455654322  234578875    899


Q ss_pred             EEEEeCCCeEEEEEcCC
Q psy2762         239 IASCSQDRKVIIWTSND  255 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~  255 (318)
                      |+++|+|..|.||+...
T Consensus       561 IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  561 IVSASEDSWVYIWKNDS  577 (712)
T ss_pred             EEEeecCceEEEEeCCC
Confidence            99999999999999633

>KOG2445|consensus

Probab=99.91  E-value=2.5e-22  Score=167.15  Aligned_cols=218  Identities=25%  Similarity=0.512  Sum_probs=166.1

Q ss_pred             cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC--CCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      .+|.+-|.++.|.  ..|+++|+||.|++|+|||..  ++.+.++...+.|.+.|..|.|.+.++|.++|+++.|+++.|
T Consensus        10 s~h~DlihdVs~D--~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i   87 (361)
T KOG2445|consen   10 SGHKDLIHDVSFD--FYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI   87 (361)
T ss_pred             cCCcceeeeeeec--ccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence            4799999999996  369999999999999999964  356777778889999999999999999999999999999999


Q ss_pred             EEeecCC-----CCcce-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC----CeE
Q psy2762         141 LTYMSDT-----NSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG----DKW  210 (318)
Q Consensus       141 ~~~~~~~-----~~~~~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~----~~~  210 (318)
                      |......     ..|.. ..+......|..+.|.|.-               .|-.||+++.||+||||+.-.    ..+
T Consensus        88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~h---------------lGLklA~~~aDG~lRIYEA~dp~nLs~W  152 (361)
T KOG2445|consen   88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKH---------------LGLKLAAASADGILRIYEAPDPMNLSQW  152 (361)
T ss_pred             eeecccccccccceeEEEEEeecCCcceeEEEecchh---------------cceEEEEeccCcEEEEEecCCccccccc
Confidence            9752211     12221 2233456678899999852               145799999999999997432    223


Q ss_pred             EEEEEcc-------cCCCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCc-ce-eeEEeeecCCcEEEEEE
Q psy2762         211 IEETKLE-------NHSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYV-TW-TPFIMNTFDDVVWNVSW  276 (318)
Q Consensus       211 ~~~~~~~-------~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~-~~-~~~~~~~~~~~v~~v~~  276 (318)
                      ...+++.       .+..+..||+|+|... ...+||.|+.+     +.++||...+.. .| ....++.|.++|.+++|
T Consensus       153 ~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~-~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~w  231 (361)
T KOG2445|consen  153 TLQHEIQNVIDPPGKNKQPCFCVSWNPSRM-HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISW  231 (361)
T ss_pred             hhhhhhhhccCCcccccCcceEEeeccccc-cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeee
Confidence            2233333       4677889999998643 24567777766     478999866543 33 24567789999999999


Q ss_pred             cCC-C---CEEEEEeCCCeEEEEEECC
Q psy2762         277 SLT-G---DILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       277 spd-g---~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|. |   .+||+++.|| ||||++..
T Consensus       232 APn~Gr~y~~lAvA~kDg-v~I~~v~~  257 (361)
T KOG2445|consen  232 APNIGRSYHLLAVATKDG-VRIFKVKV  257 (361)
T ss_pred             ccccCCceeeEEEeecCc-EEEEEEee
Confidence            996 3   6799999999 99999763

>KOG0646|consensus

Probab=99.91  E-value=1.2e-22  Score=177.25  Aligned_cols=226  Identities=16%  Similarity=0.165  Sum_probs=178.2

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      +++|.+++-+|+|.+|+.|+.-+.+.+|.+.           +|.++..+.+|=..|+++.|+  .||.+|+|||-||.|
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWels-----------sG~LL~v~~aHYQ~ITcL~fs--~dgs~iiTgskDg~V  147 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELS-----------SGILLNVLSAHYQSITCLKFS--DDGSHIITGSKDGAV  147 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEec-----------cccHHHHHHhhccceeEEEEe--CCCcEEEecCCCccE
Confidence            6789999999999999998899999999997           578889999999999999997  369999999999999


Q ss_pred             EEEeCC-------CCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          93 IIWRGD-------NGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        93 ~vWd~~-------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      .+|.+.       +....+...+..|+-+|.++...+.+...+++++|.|.+|++||+..+.    +..-......+.++
T Consensus       148 ~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~----LLlti~fp~si~av  223 (476)
T KOG0646|consen  148 LVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV----LLLTITFPSSIKAV  223 (476)
T ss_pred             EEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce----eeEEEecCCcceeE
Confidence            999752       1233456678899999999998886556789999999999999986543    11112345567888


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--------------EEEEEEcccCCC--CeeEEEEc
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--------------WIEETKLENHSD--WVRDVAWA  229 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--------------~~~~~~~~~h~~--~V~~v~~s  229 (318)
                      +..|.                 ...+..|+++|.|.+.++..-.              -.+...+.||.+  .|+|++.+
T Consensus       224 ~lDpa-----------------e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais  286 (476)
T KOG0646|consen  224 ALDPA-----------------ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS  286 (476)
T ss_pred             EEccc-----------------ccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe
Confidence            88885                 3678999999999988754211              123455789988  99999999


Q ss_pred             cCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       230 p~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      .+    |+.|+||+.||+++|||.....+  ++.+....++|..+.+.|
T Consensus       287 ~D----gtlLlSGd~dg~VcvWdi~S~Q~--iRtl~~~kgpVtnL~i~~  329 (476)
T KOG0646|consen  287 TD----GTLLLSGDEDGKVCVWDIYSKQC--IRTLQTSKGPVTNLQINP  329 (476)
T ss_pred             cC----ccEEEeeCCCCCEEEEecchHHH--HHHHhhhccccceeEeec
Confidence            85    99999999999999999876432  222222445677777754

>KOG0267|consensus

Probab=99.90  E-value=2.7e-24  Score=196.16  Aligned_cols=223  Identities=21%  Similarity=0.331  Sum_probs=183.5

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~  105 (318)
                      ..++....+-.++||+..                 .+..|...|.++...  ..++.+++|+.|-.+-+|.+....  ..
T Consensus         5 ~~~m~~~~~t~Lr~~~~~-----------------~~~~hsaav~~lk~~--~s~r~~~~Gg~~~k~~L~~i~kp~--~i   63 (825)
T KOG0267|consen    5 EFLMKTKRATKLRVWDTR-----------------EFVAHSAAVGCLKIR--KSSRSLVTGGEDEKVNLWAIGKPN--AI   63 (825)
T ss_pred             cccceeeeeeccccccch-----------------hhhhhhhhhceeeee--ccceeeccCCCceeeccccccCCc--hh
Confidence            344555556667788753                 244689999998863  358899999999999999876433  44


Q ss_pred             EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762         106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      ..+.+|.++|.+|.|++.  +.++++|+.+|+|++||+....   .++.+.+|..++.++.|+|.               
T Consensus        64 ~S~~~hespIeSl~f~~~--E~LlaagsasgtiK~wDleeAk---~vrtLtgh~~~~~sv~f~P~---------------  123 (825)
T KOG0267|consen   64 TSLTGHESPIESLTFDTS--ERLLAAGSASGTIKVWDLEEAK---IVRTLTGHLLNITSVDFHPY---------------  123 (825)
T ss_pred             heeeccCCcceeeecCcc--hhhhcccccCCceeeeehhhhh---hhhhhhccccCcceeeeccc---------------
Confidence            457799999999999998  5689999999999999986432   35677899999999999996               


Q ss_pred             CccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee
Q psy2762         186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN  265 (318)
Q Consensus       186 ~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~  265 (318)
                        +.|+|+|+.|+.+++||.+...+  ...+.+|...|..+.|+|+    |.+++++++|.+++|||+..+.  ...++.
T Consensus       124 --~~~~a~gStdtd~~iwD~Rk~Gc--~~~~~s~~~vv~~l~lsP~----Gr~v~~g~ed~tvki~d~~agk--~~~ef~  193 (825)
T KOG0267|consen  124 --GEFFASGSTDTDLKIWDIRKKGC--SHTYKSHTRVVDVLRLSPD----GRWVASGGEDNTVKIWDLTAGK--LSKEFK  193 (825)
T ss_pred             --eEEeccccccccceehhhhccCc--eeeecCCcceeEEEeecCC----CceeeccCCcceeeeecccccc--cccccc
Confidence              57889999999999999885544  5677889999999999996    8999999999999999986432  123456


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         266 TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       266 ~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|+..|.++.|+|..-+|++||.|++|++||+++
T Consensus       194 ~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet  227 (825)
T KOG0267|consen  194 SHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET  227 (825)
T ss_pred             cccccccccccCchhhhhccCCCCceeeeeccce
Confidence            7889999999999999999999999999999773

>KOG4283|consensus

Probab=99.90  E-value=1e-22  Score=168.63  Aligned_cols=214  Identities=18%  Similarity=0.274  Sum_probs=164.0

Q ss_pred             ecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc----------EEEEE---EecCCCcCeEEEEeeCCCCCcE
Q psy2762          62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN----------WFKYY---EYNNHDSSVNSIAWAPKEFGLI  128 (318)
Q Consensus        62 ~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~----------~~~~~---~~~~h~~~v~~v~~~p~~~~~~  128 (318)
                      .+-|.+.|+++... +..|++++||+.||.|.|||+++..          .++..   --.+|.-.|.++-|-|-+.+ .
T Consensus        39 ~r~HgGsvNsL~id-~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG-m  116 (397)
T KOG4283|consen   39 VRPHGGSVNSLQID-LTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG-M  116 (397)
T ss_pred             eccCCCccceeeec-cccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCc-e
Confidence            34589999999985 4679999999999999999987642          11211   12357889999999998644 6


Q ss_pred             EEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC
Q psy2762         129 LACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD  208 (318)
Q Consensus       129 lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~  208 (318)
                      +.+++.|.++++||...-    +......-+..|.+-+++|-.              .....||+|..|-.||+.|+..+
T Consensus       117 FtssSFDhtlKVWDtnTl----Q~a~~F~me~~VYshamSp~a--------------~sHcLiA~gtr~~~VrLCDi~SG  178 (397)
T KOG4283|consen  117 FTSSSFDHTLKVWDTNTL----QEAVDFKMEGKVYSHAMSPMA--------------MSHCLIAAGTRDVQVRLCDIASG  178 (397)
T ss_pred             eecccccceEEEeecccc----eeeEEeecCceeehhhcChhh--------------hcceEEEEecCCCcEEEEeccCC
Confidence            889999999999997322    111222344556666777731              01346889999999999999998


Q ss_pred             eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-----------eeEE--eeecCCcEEEEE
Q psy2762         209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-----------TPFI--MNTFDDVVWNVS  275 (318)
Q Consensus       209 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-----------~~~~--~~~~~~~v~~v~  275 (318)
                      .+  .+.+.||.+.|.+|.|+|.   ....|++||.|+.||+||+......           .|..  -..|.+.|++++
T Consensus       179 s~--sH~LsGHr~~vlaV~Wsp~---~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla  253 (397)
T KOG4283|consen  179 SF--SHTLSGHRDGVLAVEWSPS---SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLA  253 (397)
T ss_pred             cc--eeeeccccCceEEEEeccC---ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeee
Confidence            65  5788999999999999997   5678999999999999998775211           1111  124567899999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         276 WSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       276 ~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      |+-||.+|++.+.|..+|+|+...+
T Consensus       254 ~tSd~~~l~~~gtd~r~r~wn~~~G  278 (397)
T KOG4283|consen  254 WTSDARYLASCGTDDRIRVWNMESG  278 (397)
T ss_pred             ecccchhhhhccCccceEEeecccC
Confidence            9999999999999999999996553

>KOG0268|consensus

Probab=99.90  E-value=1.9e-23  Score=177.22  Aligned_cols=223  Identities=18%  Similarity=0.228  Sum_probs=159.9

Q ss_pred             EEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762          58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT  137 (318)
Q Consensus        58 ~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~  137 (318)
                      .+..|.||.+.|.+++= +|..-..+|||+.||.|+|||+.+..  +...+..|.+.|..|++..    ..+++++.|++
T Consensus        58 Fv~~L~gHrdGV~~lak-hp~~ls~~aSGs~DG~VkiWnlsqR~--~~~~f~AH~G~V~Gi~v~~----~~~~tvgdDKt  130 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAK-HPNKLSTVASGSCDGEVKIWNLSQRE--CIRTFKAHEGLVRGICVTQ----TSFFTVGDDKT  130 (433)
T ss_pred             chhhccccccccchhhc-CcchhhhhhccccCceEEEEehhhhh--hhheeecccCceeeEEecc----cceEEecCCcc
Confidence            47788999999999995 66555789999999999999998765  4556778999999999886    24778899999


Q ss_pred             EEEEEeecCCC-C----cceeeec--------------------ccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         138 ISFLTYMSDTN-S----WESRKIA--------------------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       138 i~i~~~~~~~~-~----~~~~~~~--------------------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      |+.|.++-+.. .    .....+.                    .+..|+.++.|..+.    ....+.++.  +-..|+
T Consensus       131 vK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dt----i~svkfNpv--ETsILa  204 (433)
T KOG0268|consen  131 VKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADS----ISSVKFNPV--ETSILA  204 (433)
T ss_pred             eeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCc----eeEEecCCC--cchhee
Confidence            99997432110 0    0000000                    122344444443321    001111111  124699


Q ss_pred             EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE
Q psy2762         193 SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW  272 (318)
Q Consensus       193 sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~  272 (318)
                      ++++|+.|.|||++.+.+.....+.--   -+.|||+|+    +..++++++|..+..+|..... .......+|...|.
T Consensus       205 s~~sDrsIvLyD~R~~~Pl~KVi~~mR---TN~IswnPe----afnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvsAV~  276 (433)
T KOG0268|consen  205 SCASDRSIVLYDLRQASPLKKVILTMR---TNTICWNPE----AFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVSAVM  276 (433)
T ss_pred             eeccCCceEEEecccCCccceeeeecc---ccceecCcc----ccceeeccccccceehhhhhhc-ccchhhcccceeEE
Confidence            999999999999998865444333222   468999995    6789999999999999986643 22334567888999


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         273 NVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +|+|||.|+.++|||.|++|||+..+.+-
T Consensus       277 dVdfsptG~EfvsgsyDksIRIf~~~~~~  305 (433)
T KOG0268|consen  277 DVDFSPTGQEFVSGSYDKSIRIFPVNHGH  305 (433)
T ss_pred             EeccCCCcchhccccccceEEEeecCCCc
Confidence            99999999999999999999999987754

>KOG0307|consensus

Probab=99.90  E-value=1.6e-23  Score=199.77  Aligned_cols=254  Identities=19%  Similarity=0.369  Sum_probs=194.3

Q ss_pred             ceeeeeeecCCCCE----EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          14 DMIHDAEMDYLGLY----LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        14 ~~v~~~~~~~~g~~----l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ...+.++|.+.|..    ||.|..||+|.+||...-     .....-.++.++..|++.|..+.|++ ..+++||||+.|
T Consensus        65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~-----~~~~~~~~la~~~~h~G~V~gLDfN~-~q~nlLASGa~~  138 (1049)
T KOG0307|consen   65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASI-----IANASEEVLATKSKHTGPVLGLDFNP-FQGNLLASGADD  138 (1049)
T ss_pred             ccceeeeecccCCCccceeeccccCCceEEecchhh-----ccCcchHHHhhhcccCCceeeeeccc-cCCceeeccCCC
Confidence            35677899888876    899999999999998631     01112345788899999999999974 568899999999


Q ss_pred             CeEEEEeCCCCcEEEEEEe--cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc--ccccee
Q psy2762          90 RKVIIWRGDNGNWFKYYEY--NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT--IGCNAV  165 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~--~~v~~~  165 (318)
                      |.|.|||+.+-+  ..+..  ....+.|.+++|+-.- .++||+++.+|.+.|||++...   .+.++.-|.  ..|..+
T Consensus       139 geI~iWDlnn~~--tP~~~~~~~~~~eI~~lsWNrkv-qhILAS~s~sg~~~iWDlr~~~---pii~ls~~~~~~~~S~l  212 (1049)
T KOG0307|consen  139 GEILIWDLNKPE--TPFTPGSQAPPSEIKCLSWNRKV-SHILASGSPSGRAVIWDLRKKK---PIIKLSDTPGRMHCSVL  212 (1049)
T ss_pred             CcEEEeccCCcC--CCCCCCCCCCcccceEeccchhh-hHHhhccCCCCCceeccccCCC---cccccccCCCccceeee
Confidence            999999987643  11111  1245789999999753 6789999999999999986443   233444332  347899


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      +|+|+.                ...|+++++|.   .|.+||++.-. .+..++++|...|.+++|++.   +..+|+|+
T Consensus       213 ~WhP~~----------------aTql~~As~dd~~PviqlWDlR~as-sP~k~~~~H~~GilslsWc~~---D~~lllSs  272 (1049)
T KOG0307|consen  213 AWHPDH----------------ATQLLVASGDDSAPVIQLWDLRFAS-SPLKILEGHQRGILSLSWCPQ---DPRLLLSS  272 (1049)
T ss_pred             eeCCCC----------------ceeeeeecCCCCCceeEeecccccC-CchhhhcccccceeeeccCCC---Cchhhhcc
Confidence            999974                34677777665   69999977532 245667899999999999997   67899999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCCC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.|+.|.+|+.++..  ....+..-.+++..|.|+|-.. .+++++-||.|.|+.+...+
T Consensus       273 gkD~~ii~wN~~tgE--vl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  273 GKDNRIICWNPNTGE--VLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             cCCCCeeEecCCCce--EeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            999999999988743  2334445567999999999776 78888999999999976543

>KOG1273|consensus

Probab=99.90  E-value=1.4e-21  Score=163.30  Aligned_cols=251  Identities=14%  Similarity=0.236  Sum_probs=173.3

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      -+++.|++.|.+||.|..||.|-|||+..           ...-+++.+|..+|++++|++  +|.+|+|+|.|..|++|
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T-----------~~iar~lsaH~~pi~sl~WS~--dgr~LltsS~D~si~lw   92 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDT-----------FRIARMLSAHVRPITSLCWSR--DGRKLLTSSRDWSIKLW   92 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccc-----------cchhhhhhccccceeEEEecC--CCCEeeeecCCceeEEE
Confidence            67899999999999999999999999972           235577899999999999985  59999999999999999


Q ss_pred             eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCc
Q psy2762          96 RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLS  175 (318)
Q Consensus        96 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~  175 (318)
                      |+..+.+.....   ..++|..+.|+|...++.+|+--... -.+.++.++..    ..+.....  ..+..++.     
T Consensus        93 Dl~~gs~l~rir---f~spv~~~q~hp~k~n~~va~~~~~s-p~vi~~s~~~h----~~Lp~d~d--~dln~sas-----  157 (405)
T KOG1273|consen   93 DLLKGSPLKRIR---FDSPVWGAQWHPRKRNKCVATIMEES-PVVIDFSDPKH----SVLPKDDD--GDLNSSAS-----  157 (405)
T ss_pred             eccCCCceeEEE---ccCccceeeeccccCCeEEEEEecCC-cEEEEecCCce----eeccCCCc--cccccccc-----
Confidence            998887555444   46899999999987776666533222 22333322110    00000000  00000110     


Q ss_pred             cccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       176 ~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                          . ..+...++||++|...|.+.++|..+-+++....... ...|+.+.++..    |..|+.-+.|+.||.|+.+.
T Consensus       158 ----~-~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits-~~~IK~I~~s~~----g~~liiNtsDRvIR~ye~~d  227 (405)
T KOG1273|consen  158 ----H-GVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITS-VQAIKQIIVSRK----GRFLIINTSDRVIRTYEISD  227 (405)
T ss_pred             ----c-ccccCCCCEEEEecCcceEEEEecchheeeeeeeech-heeeeEEEEecc----CcEEEEecCCceEEEEehhh
Confidence                0 0111236899999999999999988876654444332 367999999985    88999999999999999875


Q ss_pred             Ccce----eeEEeeecCCc-----EEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceE
Q psy2762         256 YVTW----TPFIMNTFDDV-----VWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       256 ~~~~----~~~~~~~~~~~-----v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~  304 (318)
                      ....    .+.....+++.     =..+.||.||.++..++ .-..+.||..+.|+..+
T Consensus       228 i~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVK  286 (405)
T KOG1273|consen  228 IDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVK  286 (405)
T ss_pred             hcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceee
Confidence            3211    11111122222     34678899999987665 45689999977765444

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=7e-20  Score=160.97  Aligned_cols=245  Identities=16%  Similarity=0.160  Sum_probs=161.4

Q ss_pred             eeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeE
Q psy2762          15 MIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v   92 (318)
                      .+..++|+|+|+++ ++++.|+.|++||...           ++.+..+..+.. +..+.|++  +++.+ ++++.|+.+
T Consensus        32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~-~~~~~~~~--~g~~l~~~~~~~~~l   97 (300)
T TIGR03866        32 RPRGITLSKDGKLLYVCASDSDTIQVIDLAT-----------GEVIGTLPSGPD-PELFALHP--NGKILYIANEDDNLV   97 (300)
T ss_pred             CCCceEECCCCCEEEEEECCCCeEEEEECCC-----------CcEEEeccCCCC-ccEEEECC--CCCEEEEEcCCCCeE
Confidence            46789999999976 5677899999999862           345555655444 45678863  46655 455678999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-eEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      ++||+.+.+...  .+. +...+.+++|+|+  +.++++++.++ .+.+|+.....   ....+. .......++|+|+ 
T Consensus        98 ~~~d~~~~~~~~--~~~-~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~~~~~~~~s~d-  167 (300)
T TIGR03866        98 TVIDIETRKVLA--EIP-VGVEPEGMAVSPD--GKIVVNTSETTNMAHFIDTKTYE---IVDNVL-VDQRPRFAEFTAD-  167 (300)
T ss_pred             EEEECCCCeEEe--Eee-CCCCcceEEECCC--CCEEEEEecCCCeEEEEeCCCCe---EEEEEE-cCCCccEEEECCC-
Confidence            999998765333  332 2344678999998  66777777765 45566753221   111111 2223466888886 


Q ss_pred             CCCccccccCCCCCCccceE-EEecCCCeEEEEEccCCeEEEEEEccc---CCC--CeeEEEEccCCCCCccE-EEEEeC
Q psy2762         172 GSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEGDKWIEETKLEN---HSD--WVRDVAWAPSWGLSKCM-IASCSQ  244 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~~~~~~~~~~~~---h~~--~V~~v~~sp~~~~~~~~-l~s~s~  244 (318)
                                      +++| +++..++.|++||+.+++......+..   +..  ....++|+|+    +.+ +++.+.
T Consensus       168 ----------------g~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d----g~~~~~~~~~  227 (300)
T TIGR03866       168 ----------------GKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKD----GKTAFVALGP  227 (300)
T ss_pred             ----------------CCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCC----CCEEEEEcCC
Confidence                            3455 555679999999998775433222221   111  2346889996    554 455556


Q ss_pred             CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEEE
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~~  306 (318)
                      ++.+.+||..+...  .... .+...+++++|+|+|++|++++ .+++|++||.+.+....++
T Consensus       228 ~~~i~v~d~~~~~~--~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~  287 (300)
T TIGR03866       228 ANRVAVVDAKTYEV--LDYL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSI  287 (300)
T ss_pred             CCeEEEEECCCCcE--EEEE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence            77899999876431  1112 2345789999999999998874 5899999998876444444

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0639|consensus

Probab=99.89  E-value=3.5e-22  Score=175.85  Aligned_cols=249  Identities=14%  Similarity=0.240  Sum_probs=192.4

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc--cccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--HSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..|.+-|.++.++...++++|||. |.|+|||+....        ....+..|..  -...|.++...+  +|..|++|+
T Consensus       416 L~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg--------~k~PvsqLdcl~rdnyiRSckL~p--dgrtLivGG  484 (705)
T KOG0639|consen  416 LAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPG--------NKSPVSQLDCLNRDNYIRSCKLLP--DGRTLIVGG  484 (705)
T ss_pred             hccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCC--------CCCccccccccCcccceeeeEecC--CCceEEecc
Confidence            479999999999999999999985 789999997431        1223333332  345677787753  699999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      +-.++.|||+.........++....-.++.++.+||  .++..++..||.|.|||+.+.   ..++.+.+|+.++.++..
T Consensus       485 eastlsiWDLAapTprikaeltssapaCyALa~spD--akvcFsccsdGnI~vwDLhnq---~~VrqfqGhtDGascIdi  559 (705)
T KOG0639|consen  485 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--AKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDI  559 (705)
T ss_pred             ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCc--cceeeeeccCCcEEEEEcccc---eeeecccCCCCCceeEEe
Confidence            999999999876542222223223346788999999  566777788999999998543   356778899999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +++                 |..|=||+-|++||-||++.+...+.+.   ....|.++.++|+    +..|+.|=+.+.
T Consensus       560 s~d-----------------GtklWTGGlDntvRcWDlregrqlqqhd---F~SQIfSLg~cP~----~dWlavGMens~  615 (705)
T KOG0639|consen  560 SKD-----------------GTKLWTGGLDNTVRCWDLREGRQLQQHD---FSSQIFSLGYCPT----GDWLAVGMENSN  615 (705)
T ss_pred             cCC-----------------CceeecCCCccceeehhhhhhhhhhhhh---hhhhheecccCCC----ccceeeecccCc
Confidence            886                 5679999999999999998764333332   3456999999996    789999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.|-...+...   ..+.-|+.-|.++.|++.|++++|++.|+-+..|..-.+-
T Consensus       616 vevlh~skp~k---yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGa  666 (705)
T KOG0639|consen  616 VEVLHTSKPEK---YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA  666 (705)
T ss_pred             EEEEecCCccc---eeecccccEEEEEEecccCceeeecCchhhhhhccCcccc
Confidence            98887766432   3455678899999999999999999999999999855443

>KOG0270|consensus

Probab=99.89  E-value=9.8e-22  Score=170.66  Aligned_cols=208  Identities=23%  Similarity=0.341  Sum_probs=162.5

Q ss_pred             cCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           9 DTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..||++.|.++.++.+ -+.|||||.|.||++||++           .+++..++..|.+.|.++.| +|..+..|++||
T Consensus       239 ~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~-----------~g~p~~s~~~~~k~Vq~l~w-h~~~p~~LLsGs  306 (463)
T KOG0270|consen  239 ASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVD-----------TGKPKSSITHHGKKVQTLEW-HPYEPSVLLSGS  306 (463)
T ss_pred             cccchHHHHHHHhccccceeEEecCCCceEEEEEcC-----------CCCcceehhhcCCceeEEEe-cCCCceEEEecc
Confidence            4689999999999876 4679999999999999997           46777888899999999999 567899999999


Q ss_pred             CCCeEEEEeCCCCcE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          88 YDRKVIIWRGDNGNW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +|++|.+.|.+.... ...+++   .+.|..++|+|.. ...+.+++.||+++-+|.+...+  .+..+.+|..+|..+.
T Consensus       307 ~D~~V~l~D~R~~~~s~~~wk~---~g~VEkv~w~~~s-e~~f~~~tddG~v~~~D~R~~~~--~vwt~~AHd~~ISgl~  380 (463)
T KOG0270|consen  307 YDGTVALKDCRDPSNSGKEWKF---DGEVEKVAWDPHS-ENSFFVSTDDGTVYYFDIRNPGK--PVWTLKAHDDEISGLS  380 (463)
T ss_pred             ccceEEeeeccCccccCceEEe---ccceEEEEecCCC-ceeEEEecCCceEEeeecCCCCC--ceeEEEeccCCcceEE
Confidence            999999999873221 123333   5779999999975 56788899999999999876532  3566779999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC---CCeeEEEEccCCCCCccEEEEEe
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS---DWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +++..                ...++|+|.|++|++|++...+....   ..|.   +...|.++.|+   ....+|.||
T Consensus       381 ~n~~~----------------p~~l~t~s~d~~Vklw~~~~~~~~~v---~~~~~~~~rl~c~~~~~~---~a~~la~GG  438 (463)
T KOG0270|consen  381 VNIQT----------------PGLLSTASTDKVVKLWKFDVDSPKSV---KEHSFKLGRLHCFALDPD---VAFTLAFGG  438 (463)
T ss_pred             ecCCC----------------CcceeeccccceEEEEeecCCCCccc---ccccccccceeecccCCC---cceEEEecC
Confidence            98753                24799999999999999875432111   1121   12445666665   456889999


Q ss_pred             CCCeEEEEEcCCC
Q psy2762         244 QDRKVIIWTSNDY  256 (318)
Q Consensus       244 ~D~~i~vw~~~~~  256 (318)
                      ..+.++|||..+.
T Consensus       439 ~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  439 EKAVLRVWDIFTN  451 (463)
T ss_pred             ccceEEEeecccC
Confidence            9999999998664

>KOG1446|consensus

Probab=99.89  E-value=5.5e-20  Score=153.89  Aligned_cols=242  Identities=14%  Similarity=0.213  Sum_probs=179.2

Q ss_pred             CCcceeeeeeecCCCCEEEEeeC--CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSS--DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      -++..|..++|....+.++.++.  |.+||.-++.+           .+.++.+.||...|.+++.+ |. ++.++|+|.
T Consensus        54 skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d-----------NkylRYF~GH~~~V~sL~~s-P~-~d~FlS~S~  120 (311)
T KOG1446|consen   54 SKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD-----------NKYLRYFPGHKKRVNSLSVS-PK-DDTFLSSSL  120 (311)
T ss_pred             cccccccEEEEecCCceEEEccCCCCCceEEEEeec-----------CceEEEcCCCCceEEEEEec-CC-CCeEEeccc
Confidence            36678888899766555555565  89999999963           47899999999999999986 44 589999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC-CCcceeeec-ccccccceee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT-NSWESRKIA-AHTIGCNAVS  166 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~-~~~~~~~~~-~h~~~v~~~~  166 (318)
                      |++|++||++..++.-...+    ..-..+||.|.  |.++|++.....|+++|.+.-. .......+. +-....+.+.
T Consensus       121 D~tvrLWDlR~~~cqg~l~~----~~~pi~AfDp~--GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~  194 (311)
T KOG1446|consen  121 DKTVRLWDLRVKKCQGLLNL----SGRPIAAFDPE--GLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLE  194 (311)
T ss_pred             CCeEEeeEecCCCCceEEec----CCCcceeECCC--CcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeE
Confidence            99999999986654333322    22345789998  8899999888899999986542 222222222 2234567888


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCC---eeEEEEccCCCCCccEEEEEe
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW---VRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~---V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      |+|+                 |++|+.+...+.+++.|.-.|...  .++.++...   --+.+|+|+    +.++.+|+
T Consensus       195 FS~d-----------------GK~iLlsT~~s~~~~lDAf~G~~~--~tfs~~~~~~~~~~~a~ftPd----s~Fvl~gs  251 (311)
T KOG1446|consen  195 FSPD-----------------GKSILLSTNASFIYLLDAFDGTVK--STFSGYPNAGNLPLSATFTPD----SKFVLSGS  251 (311)
T ss_pred             EcCC-----------------CCEEEEEeCCCcEEEEEccCCcEe--eeEeeccCCCCcceeEEECCC----CcEEEEec
Confidence            9997                 689999999999999997777643  334444332   146789996    88999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      .||+|.+|++++...  .....+ +..++..+.|+|--.+++|++  ..+-+|=-+
T Consensus       252 ~dg~i~vw~~~tg~~--v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~  303 (311)
T KOG1446|consen  252 DDGTIHVWNLETGKK--VAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPD  303 (311)
T ss_pred             CCCcEEEEEcCCCcE--eeEecCCCCCCccccccCCceeeeeecC--ceEEEEecc
Confidence            999999999977642  222333 567888899999988888775  478888533

>KOG0321|consensus

Probab=99.89  E-value=1.7e-21  Score=175.89  Aligned_cols=255  Identities=16%  Similarity=0.267  Sum_probs=173.1

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE--ecccccCeEEEEecCCCCCcEEEEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE--LKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~--~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ...|...|..+++-|...+|++++.|.++++||++.           ..++..  +.||.+.|.+++|. +.+...|++|
T Consensus        96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~-----------s~l~G~~~~~GH~~SvkS~cf~-~~n~~vF~tG  163 (720)
T KOG0321|consen   96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKT-----------SRLVGGRLNLGHTGSVKSECFM-PTNPAVFCTG  163 (720)
T ss_pred             cccccceeEeeccCCCceeEEEccCCceeeeeeecc-----------ceeecceeecccccccchhhhc-cCCCcceeec
Confidence            357999999999999778999999999999999973           344444  88999999999995 5678999999


Q ss_pred             ECCCeEEEEeCCCCc--------------------E-----EEEEEecCCCcCeEE---EEeeCCCCCcEEEEeec-CCe
Q psy2762          87 SYDRKVIIWRGDNGN--------------------W-----FKYYEYNNHDSSVNS---IAWAPKEFGLILACGSS-DGT  137 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~--------------------~-----~~~~~~~~h~~~v~~---v~~~p~~~~~~lasgs~-d~~  137 (318)
                      +.||.|.|||+.-..                    .     ..+.+...|...|.+   +-+..|  +..||+++. |+.
T Consensus       164 gRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkD--e~tlaSaga~D~~  241 (720)
T KOG0321|consen  164 GRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKD--ESTLASAGAADST  241 (720)
T ss_pred             cCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEec--cceeeeccCCCcc
Confidence            999999999974110                    0     011112234444544   445556  345666666 999


Q ss_pred             EEEEEeecCCCCcceeeecccc---c-----ccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCC
Q psy2762         138 ISFLTYMSDTNSWESRKIAAHT---I-----GCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGD  208 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h~---~-----~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~  208 (318)
                      |++||++.............+.   .     ++..+....              +   |.+ +|++. |+.|++|++..-
T Consensus       242 iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDs--------------s---Gt~L~AsCt-D~sIy~ynm~s~  303 (720)
T KOG0321|consen  242 IKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDS--------------S---GTYLFASCT-DNSIYFYNMRSL  303 (720)
T ss_pred             eEEEeecccccccccCCCcccCccCcccceeeeEEEEecC--------------C---CCeEEEEec-CCcEEEEecccc
Confidence            9999997554322211111111   0     111111111              1   334 55555 999999998764


Q ss_pred             eEEEEEEcccCCC---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC-CCEEE
Q psy2762         209 KWIEETKLENHSD---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT-GDILT  284 (318)
Q Consensus       209 ~~~~~~~~~~h~~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd-g~~l~  284 (318)
                      ...+.+.+.++..   .|.+ ..+|+    +++|+||+.|....+|.+.... ..+..+.+|...|..|.|.|. -.-++
T Consensus       304 s~sP~~~~sg~~~~sf~vks-~lSpd----~~~l~SgSsd~~ayiw~vs~~e-~~~~~l~Ght~eVt~V~w~pS~~t~v~  377 (720)
T KOG0321|consen  304 SISPVAEFSGKLNSSFYVKS-ELSPD----DCSLLSGSSDEQAYIWVVSSPE-APPALLLGHTREVTTVRWLPSATTPVA  377 (720)
T ss_pred             CcCchhhccCcccceeeeee-ecCCC----CceEeccCCCcceeeeeecCcc-CChhhhhCcceEEEEEeeccccCCCce
Confidence            4334444555432   2322 45664    8999999999999999987743 234566789999999999984 23455


Q ss_pred             EEeCCCeEEEEEECCCC
Q psy2762         285 VSCGDNSVSLWKENTDG  301 (318)
Q Consensus       285 s~~~D~~v~iW~~~~~~  301 (318)
                      ++++|-+++||++..+.
T Consensus       378 TcSdD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  378 TCSDDFRVKIWRLSNGL  394 (720)
T ss_pred             eeccCcceEEEeccCch
Confidence            66999999999986543

>KOG1063|consensus

Probab=99.89  E-value=2.3e-20  Score=169.91  Aligned_cols=258  Identities=20%  Similarity=0.309  Sum_probs=192.8

Q ss_pred             eecCCCcceeeeeeecCCCC---EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGL---YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~---~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      ....||...|+|+.+=|+..   +|+||+.|+.|++|.+...         --..+.++.+|...+.|+.=.    ....
T Consensus        48 t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~---------~~~~i~~~~g~~~~~~cv~a~----~~~~  114 (764)
T KOG1063|consen   48 TTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDE---------YLIKIYTIQGHCKECVCVVAR----SSVM  114 (764)
T ss_pred             EeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeeh---------heEEEEeecCcceeEEEEEee----eeEE
Confidence            34579999999999988877   8999999999999998621         124567788888777776421    1222


Q ss_pred             EEEECCCeEEEEeCCC------------------------------------------------CcEEEEEEecCCCcCe
Q psy2762          84 ASCSYDRKVIIWRGDN------------------------------------------------GNWFKYYEYNNHDSSV  115 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~------------------------------------------------~~~~~~~~~~~h~~~v  115 (318)
                      ...+.|+++.+||.++                                                .++.....+.||..-|
T Consensus       115 ~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWI  194 (764)
T KOG1063|consen  115 TCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWI  194 (764)
T ss_pred             EeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhh
Confidence            2236788888887631                                                1223445678999999


Q ss_pred             EEEEeeCCCC-CcEEEEeecCCeEEEEEeecCCCCc---------------------cee-------eecccccccceee
Q psy2762         116 NSIAWAPKEF-GLILACGSSDGTISFLTYMSDTNSW---------------------ESR-------KIAAHTIGCNAVS  166 (318)
Q Consensus       116 ~~v~~~p~~~-~~~lasgs~d~~i~i~~~~~~~~~~---------------------~~~-------~~~~h~~~v~~~~  166 (318)
                      .+++|..... ..++|++|+|.+||||.+......-                     ++.       .+++|..-|+++-
T Consensus       195 rsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~  274 (764)
T KOG1063|consen  195 RSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVW  274 (764)
T ss_pred             hhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEE
Confidence            9999987654 5789999999999999875332000                     011       1348999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--eEEE---EEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIE---ETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~~~~---~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      |+|.                 +..|+++|.|+++-||..+..  -++.   ...+.|....-...-|+|+    +..+++
T Consensus       275 W~p~-----------------~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n----~~~ii~  333 (764)
T KOG1063|consen  275 WHPE-----------------GLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPN----SNVIIA  333 (764)
T ss_pred             Eccc-----------------hhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCC----CCEEEE
Confidence            9996                 346999999999999987654  3433   3344444445678899996    678888


Q ss_pred             EeCCCeEEEEEcCCCcceee-EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~-~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      -|.-|-.++|..++...|.. ....+|.+.|.+|+|+|.|.+|.|+|.|.|-||+...
T Consensus       334 ~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w  391 (764)
T KOG1063|consen  334 HGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW  391 (764)
T ss_pred             ecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccc
Confidence            99999999998555444543 3456899999999999999999999999999998754

>KOG1036|consensus

Probab=99.89  E-value=4.4e-21  Score=159.85  Aligned_cols=232  Identities=15%  Similarity=0.219  Sum_probs=168.1

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      -|+.++++++|.+ ...+++|+.||.|+.+|++..           + ...+..|..+|.|+.++. . ...+++||+|+
T Consensus        52 ~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~-----------~-~~~igth~~~i~ci~~~~-~-~~~vIsgsWD~  116 (323)
T KOG1036|consen   52 KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG-----------N-EDQIGTHDEGIRCIEYSY-E-VGCVISGSWDK  116 (323)
T ss_pred             ecCCceeeeeccC-CceEEEeccCceEEEEEecCC-----------c-ceeeccCCCceEEEEeec-c-CCeEEEcccCc
Confidence            4899999999977 467889999999999999743           1 234567999999999973 2 56789999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +|++||.....  ....+. ....|+|++..-    ..|+.|..|..|.+||++......+ ..-..-...+.++++-|+
T Consensus       117 ~ik~wD~R~~~--~~~~~d-~~kkVy~~~v~g----~~LvVg~~~r~v~iyDLRn~~~~~q-~reS~lkyqtR~v~~~pn  188 (323)
T KOG1036|consen  117 TIKFWDPRNKV--VVGTFD-QGKKVYCMDVSG----NRLVVGTSDRKVLIYDLRNLDEPFQ-RRESSLKYQTRCVALVPN  188 (323)
T ss_pred             cEEEEeccccc--cccccc-cCceEEEEeccC----CEEEEeecCceEEEEEcccccchhh-hccccceeEEEEEEEecC
Confidence            99999988632  222232 345899998874    3678888999999999876543221 111222334667777775


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCC---------CCeeEEEEccCCCCCccEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHS---------DWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~---------~~V~~v~~sp~~~~~~~~l  239 (318)
                      .                 .-+|++|-||.|.+=.++..+.  .....|+.|.         .+|++++|+|-    -..|
T Consensus       189 ~-----------------eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~----~~tf  247 (323)
T KOG1036|consen  189 G-----------------EGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPI----HGTF  247 (323)
T ss_pred             C-----------------CceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccc----cceE
Confidence            2                 2378899999887744443311  1122344443         36999999995    4569


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      |||+.||.|.+||+....  +...+...+..|.+++|+.||.+||.++.
T Consensus       248 aTgGsDG~V~~Wd~~~rK--rl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  248 ATGGSDGIVNIWDLFNRK--RLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EecCCCceEEEccCcchh--hhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            999999999999998754  23455666677999999999999999874

>KOG0643|consensus

Probab=99.88  E-value=1.2e-20  Score=154.47  Aligned_cols=207  Identities=17%  Similarity=0.236  Sum_probs=163.2

Q ss_pred             EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      .++||..+++.+.|+.  +|++|+|++-|.++.||-..+++  .+.++.+|.+.|.|++..-+  ...+++|+.|.++++
T Consensus         5 ~l~GHERplTqiKyN~--eGDLlFscaKD~~~~vw~s~nGe--rlGty~GHtGavW~~Did~~--s~~liTGSAD~t~kL   78 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNR--EGDLLFSCAKDSTPTVWYSLNGE--RLGTYDGHTGAVWCCDIDWD--SKHLITGSADQTAKL   78 (327)
T ss_pred             ccccCccccceEEecC--CCcEEEEecCCCCceEEEecCCc--eeeeecCCCceEEEEEecCC--cceeeeccccceeEE
Confidence            4689999999999974  59999999999999999887776  45567899999999999877  578999999999999


Q ss_pred             EEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-----cCCCeEEEEEccCCe-----E
Q psy2762         141 LTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-----GCDNLIKIWKQEGDK-----W  210 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-----s~d~~i~iwd~~~~~-----~  210 (318)
                      ||...++.    .....-..+|..+.|+++.                 ++++..     +..+.|.++|++..+     .
T Consensus        79 WDv~tGk~----la~~k~~~~Vk~~~F~~~g-----------------n~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~  137 (327)
T KOG0643|consen   79 WDVETGKQ----LATWKTNSPVKRVDFSFGG-----------------NLILASTDKQMGYTCFVSVFDIRDDSSDIDSE  137 (327)
T ss_pred             EEcCCCcE----EEEeecCCeeEEEeeccCC-----------------cEEEEEehhhcCcceEEEEEEccCChhhhccc
Confidence            99876652    1222334578889999863                 333322     344578999876321     1


Q ss_pred             EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         211 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       211 ~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      .+...+..+...++..-|+|.    +..|++|.+||.|.+||+.+... .......|...|+++.|+||..++++++.|.
T Consensus       138 ep~~kI~t~~skit~a~Wg~l----~~~ii~Ghe~G~is~~da~~g~~-~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dt  212 (327)
T KOG0643|consen  138 EPYLKIPTPDSKITSALWGPL----GETIIAGHEDGSISIYDARTGKE-LVDSDEEHSSKINDLQFSRDRTYFITGSKDT  212 (327)
T ss_pred             CceEEecCCccceeeeeeccc----CCEEEEecCCCcEEEEEcccCce-eeechhhhccccccccccCCcceEEecccCc
Confidence            124455667788999999995    88999999999999999987532 1222345778999999999999999999999


Q ss_pred             eEEEEEECC
Q psy2762         291 SVSLWKENT  299 (318)
Q Consensus       291 ~v~iW~~~~  299 (318)
                      +.++||..+
T Consensus       213 takl~D~~t  221 (327)
T KOG0643|consen  213 TAKLVDVRT  221 (327)
T ss_pred             cceeeeccc
Confidence            999999765

>KOG4328|consensus

Probab=99.88  E-value=7.8e-21  Score=165.68  Aligned_cols=257  Identities=14%  Similarity=0.189  Sum_probs=185.8

Q ss_pred             CCCcceeeeeeecCCC--CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLG--LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .-|.+.|++++|+|..  +++|+|..-|.|-+||+....       ....-+..+..|+++|.++.|++ .+...+++.|
T Consensus       183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~-------~d~d~v~~f~~hs~~Vs~l~F~P-~n~s~i~ssS  254 (498)
T KOG4328|consen  183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE-------KDKDGVYLFTPHSGPVSGLKFSP-ANTSQIYSSS  254 (498)
T ss_pred             EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCC-------CccCceEEeccCCccccceEecC-CChhheeeec
Confidence            3478899999999975  478889999999999995110       11223566788999999999975 5678899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      +||+|++=|++......++.+..-......+.|+..+  ..++.+..=|...+||.+.+..  +...+.-|...|..+++
T Consensus       255 yDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~--~~vl~~~~~G~f~~iD~R~~~s--~~~~~~lh~kKI~sv~~  330 (498)
T KOG4328|consen  255 YDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAES--RSVLFGDNVGNFNVIDLRTDGS--EYENLRLHKKKITSVAL  330 (498)
T ss_pred             cCceeeeeeecchhhHHHhhcCccceeeeeccccCCC--ccEEEeecccceEEEEeecCCc--cchhhhhhhcccceeec
Confidence            9999999999876433333332223456778888764  3455566656788999876653  23455678889999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|-.                ..+|||+|.|++.+|||++.-.  ..+....-.|.-.|.+..|||+   +|+ |++.+.|
T Consensus       331 NP~~----------------p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs---~gt-l~TT~~D  390 (498)
T KOG4328|consen  331 NPVC----------------PWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPS---GGT-LLTTCQD  390 (498)
T ss_pred             CCCC----------------chheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCC---CCc-eEeeccC
Confidence            9953                3689999999999999977421  1122344579999999999997   455 9999999


Q ss_pred             CeEEEEEcCCCcce-eeEEeeecC----C--cEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         246 RKVIIWTSNDYVTW-TPFIMNTFD----D--VVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       246 ~~i~vw~~~~~~~~-~~~~~~~~~----~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ..|||||..-...+ .+...-.|.    .  ......|.|+-.++++|-.-..|-|+|.+
T Consensus       391 ~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~  450 (498)
T KOG4328|consen  391 NEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGN  450 (498)
T ss_pred             CceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCC
Confidence            99999998411100 011111121    1  24567999999999999888889999843

>KOG0639|consensus

Probab=99.88  E-value=2.2e-21  Score=170.91  Aligned_cols=245  Identities=16%  Similarity=0.249  Sum_probs=187.7

Q ss_pred             ccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         3 ~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      .+|+++..  ...|+++.+.|||+-|++||.-.+|.|||+..+         +..+-..+..-.-.-++++.++  |.+.
T Consensus       457 sqLdcl~r--dnyiRSckL~pdgrtLivGGeastlsiWDLAap---------TprikaeltssapaCyALa~sp--Dakv  523 (705)
T KOG0639|consen  457 SQLDCLNR--DNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAP---------TPRIKAELTSSAPACYALAISP--DAKV  523 (705)
T ss_pred             ccccccCc--ccceeeeEecCCCceEEeccccceeeeeeccCC---------CcchhhhcCCcchhhhhhhcCC--ccce
Confidence            34554433  557899999999999999999999999999743         1111122222223345566653  5899


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc--c
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT--I  160 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~--~  160 (318)
                      .+++..||.|.|||+.+..  .+.++.+|+..+.||.++++  +..|=+|+-|.+||.||.+.+.      ++..|.  .
T Consensus       524 cFsccsdGnI~vwDLhnq~--~VrqfqGhtDGascIdis~d--GtklWTGGlDntvRcWDlregr------qlqqhdF~S  593 (705)
T KOG0639|consen  524 CFSCCSDGNIAVWDLHNQT--LVRQFQGHTDGASCIDISKD--GTKLWTGGLDNTVRCWDLREGR------QLQQHDFSS  593 (705)
T ss_pred             eeeeccCCcEEEEEcccce--eeecccCCCCCceeEEecCC--CceeecCCCccceeehhhhhhh------hhhhhhhhh
Confidence            9999999999999998754  45578899999999999998  7789999999999999986543      333333  3


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      -|.++.++|.                 +.++|.|=+++.+-|......+.   ..+..|..-|.+|.|++-    |+.++
T Consensus       594 QIfSLg~cP~-----------------~dWlavGMens~vevlh~skp~k---yqlhlheScVLSlKFa~c----Gkwfv  649 (705)
T KOG0639|consen  594 QIFSLGYCPT-----------------GDWLAVGMENSNVEVLHTSKPEK---YQLHLHESCVLSLKFAYC----GKWFV  649 (705)
T ss_pred             hheecccCCC-----------------ccceeeecccCcEEEEecCCccc---eeecccccEEEEEEeccc----Cceee
Confidence            5788888886                 57899999999988877655432   334568888999999995    89999


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |.+.|..+..|..--+.  .++. ......|.+++.|-|.++|++|+.|+...+|.+
T Consensus       650 StGkDnlLnawrtPyGa--siFq-skE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  650 STGKDNLLNAWRTPYGA--SIFQ-SKESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             ecCchhhhhhccCcccc--ceee-ccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            99999999999754332  1111 123568999999999999999999999988875

>KOG0650|consensus

Probab=99.87  E-value=1.4e-20  Score=168.90  Aligned_cols=267  Identities=21%  Similarity=0.257  Sum_probs=182.3

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      ...++..||++.|+++...|.|.+|+|||.||+||||.+.           ++.++.++. -.+.|.||+|++..+--.|
T Consensus       391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~-----------TgRcvr~~~-~d~~I~~vaw~P~~~~~vL  458 (733)
T KOG0650|consen  391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIA-----------TGRCVRTVQ-FDSEIRSVAWNPLSDLCVL  458 (733)
T ss_pred             eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEee-----------cceEEEEEe-ecceeEEEEecCCCCceeE
Confidence            3456788999999999999999999999999999999997           467777765 3568999999754333344


Q ss_pred             EEEECCCeEEEEeC---------------------------------CCCc----EEEEEEecCCCcCeEEEEeeCCCCC
Q psy2762          84 ASCSYDRKVIIWRG---------------------------------DNGN----WFKYYEYNNHDSSVNSIAWAPKEFG  126 (318)
Q Consensus        84 as~s~Dg~v~vWd~---------------------------------~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~  126 (318)
                      |.+- +..+.|-+.                                 ...+    -+++ .+ .|...|..+.|+-.  |
T Consensus       459 AvA~-~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~-~I-~~~k~i~~vtWHrk--G  533 (733)
T KOG0650|consen  459 AVAV-GECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCI-VI-KHPKSIRQVTWHRK--G  533 (733)
T ss_pred             EEEe-cCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEE-EE-ecCCccceeeeecC--C
Confidence            4433 333333332                                 1000    0111 12 37788999999987  7


Q ss_pred             cEEEEeecC---CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccc--------cc----------------
Q psy2762         127 LILACGSSD---GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSEL--------DL----------------  179 (318)
Q Consensus       127 ~~lasgs~d---~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~--------~~----------------  179 (318)
                      .+|++...+   ..|.|.++.....+...++.   .+-+..+.|+|....+..+        ++                
T Consensus       534 DYlatV~~~~~~~~VliHQLSK~~sQ~PF~ks---kG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwi  610 (733)
T KOG0650|consen  534 DYLATVMPDSGNKSVLIHQLSKRKSQSPFRKS---KGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWI  610 (733)
T ss_pred             ceEEEeccCCCcceEEEEecccccccCchhhc---CCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeee
Confidence            788887664   46777776444322111122   2336678888865433211        11                


Q ss_pred             cCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC---
Q psy2762         180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY---  256 (318)
Q Consensus       180 ~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~---  256 (318)
                      ........|.-|+.|+.|+.+-.||++-+. .+-.++.-|...|++|+|++.    --+++||+.|+++.|+-..-.   
T Consensus       611 S~msihp~GDnli~gs~d~k~~WfDldlss-kPyk~lr~H~~avr~Va~H~r----yPLfas~sdDgtv~Vfhg~VY~Dl  685 (733)
T KOG0650|consen  611 SSMSIHPNGDNLILGSYDKKMCWFDLDLSS-KPYKTLRLHEKAVRSVAFHKR----YPLFASGSDDGTVIVFHGMVYNDL  685 (733)
T ss_pred             eeeeecCCCCeEEEecCCCeeEEEEcccCc-chhHHhhhhhhhhhhhhhccc----cceeeeecCCCcEEEEeeeeehhh
Confidence            011122335679999999999999987653 134567789999999999996    347999999999999853221   


Q ss_pred             ----cceeeEEeeecCCc----EEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         257 ----VTWTPFIMNTFDDV----VWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       257 ----~~~~~~~~~~~~~~----v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                          ..-....+.+|...    |.++.|+|...+|.|++.||++|+|
T Consensus       686 ~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  686 LQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             hcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence                11122345566544    9999999999999999999999998

>KOG0290|consensus

Probab=99.87  E-value=1e-20  Score=156.49  Aligned_cols=255  Identities=19%  Similarity=0.271  Sum_probs=182.7

Q ss_pred             CCcceeeeeeecCCC-----CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE--EEecccccCeEEEEecCCCCCcEE
Q psy2762          11 GHEDMIHDAEMDYLG-----LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI--AELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        11 gH~~~v~~~~~~~~g-----~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .|..+++.+-|.|+.     .+|||+|  ..+|||.+...    +.......++  ..-..|.+++++..|+. .+.+++
T Consensus        94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~e----e~~~~~~~~L~~~kns~~~aPlTSFDWne-~dp~~i  166 (364)
T KOG0290|consen   94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDE----ESRVELQSVLNNNKNSEFCAPLTSFDWNE-VDPNLI  166 (364)
T ss_pred             CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCc----CCceehhhhhccCcccccCCccccccccc-CCccee
Confidence            589999999999876     3577664  48999988621    0000000111  12345778999999964 578999


Q ss_pred             EEEECCCeEEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      .++|.|-|..|||++.+..  +.+ ++=.|...|..|+|.... ..++|+.+.||.||++|++...-..-+-+-.....+
T Consensus       167 gtSSiDTTCTiWdie~~~~~~vkT-QLIAHDKEV~DIaf~~~s-~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~p  244 (364)
T KOG0290|consen  167 GTSSIDTTCTIWDIETGVSGTVKT-QLIAHDKEVYDIAFLKGS-RDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTP  244 (364)
T ss_pred             EeecccCeEEEEEEeeccccceee-EEEecCcceeEEEeccCc-cceEEEecCCCcEEEEEecccccceEEecCCCCCCc
Confidence            9999999999999988622  232 344799999999999854 468999999999999998654322111111122345


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ...++|++..                -+++|+-..|. .|.|.|++. .+.+..++.+|.+.|+.|+|.|.   +.++|.
T Consensus       245 LlRLswnkqD----------------pnymATf~~dS~~V~iLDiR~-P~tpva~L~~H~a~VNgIaWaPh---S~~hic  304 (364)
T KOG0290|consen  245 LLRLSWNKQD----------------PNYMATFAMDSNKVVILDIRV-PCTPVARLRNHQASVNGIAWAPH---SSSHIC  304 (364)
T ss_pred             ceeeccCcCC----------------chHHhhhhcCCceEEEEEecC-CCcceehhhcCcccccceEecCC---CCceee
Confidence            6778888753                35778777665 488999874 34567889999999999999998   688999


Q ss_pred             EEeCCCeEEEEEcCCCcc---eeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEE
Q psy2762         241 SCSQDRKVIIWTSNDYVT---WTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLW  295 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~---~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW  295 (318)
                      |+|+|..+.+||+.....   ..|.+.....+.|+.+.|+| .+.+|+.+. ++.+.|-
T Consensus       305 taGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~-~kkleiL  362 (364)
T KOG0290|consen  305 TAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICF-GKKLEIL  362 (364)
T ss_pred             ecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEe-cCeeeEE
Confidence            999999999999876432   11222334567899999997 467787554 5666664

>KOG0294|consensus

Probab=99.87  E-value=1.5e-20  Score=157.04  Aligned_cols=202  Identities=18%  Similarity=0.255  Sum_probs=151.2

Q ss_pred             CCCcceeeeeeecCCCC--EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGL--YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~--~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .-|.+.|+++.|.++-.  +|+||+.||.|.+|+..           .+.++.++++|.+.|+.++. || .+++.+|.+
T Consensus        80 l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~-----------~W~~~~slK~H~~~Vt~lsi-HP-S~KLALsVg  146 (362)
T KOG0294|consen   80 LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG-----------SWELLKSLKAHKGQVTDLSI-HP-SGKLALSVG  146 (362)
T ss_pred             eccccceEEEEecCCcchhheeeecCCCcEEEEEcC-----------CeEEeeeecccccccceeEe-cC-CCceEEEEc
Confidence            35999999999998765  89999999999999986           46889999999999999997 77 589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.+++||+-.++......+. +.  ..-|.|+|.  +.+++.+..++ |-+|....-.    +......+..+.++.|
T Consensus       147 ~D~~lr~WNLV~Gr~a~v~~L~-~~--at~v~w~~~--Gd~F~v~~~~~-i~i~q~d~A~----v~~~i~~~~r~l~~~~  216 (362)
T KOG0294|consen  147 GDQVLRTWNLVRGRVAFVLNLK-NK--ATLVSWSPQ--GDHFVVSGRNK-IDIYQLDNAS----VFREIENPKRILCATF  216 (362)
T ss_pred             CCceeeeehhhcCccceeeccC-Cc--ceeeEEcCC--CCEEEEEeccE-EEEEecccHh----Hhhhhhccccceeeee
Confidence            9999999998777543333332 22  234899998  66777777664 6677653211    1000011122333333


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      ..                  +.+|++|+.|+.|++||.+...  +...+.+|...|.++.+-.+  +.+.+|+|+|.||.
T Consensus       217 l~------------------~~~L~vG~d~~~i~~~D~ds~~--~~~~~~AH~~RVK~i~~~~~--~~~~~lvTaSSDG~  274 (362)
T KOG0294|consen  217 LD------------------GSELLVGGDNEWISLKDTDSDT--PLTEFLAHENRVKDIASYTN--PEHEYLVTASSDGF  274 (362)
T ss_pred             cC------------------CceEEEecCCceEEEeccCCCc--cceeeecchhheeeeEEEec--CCceEEEEeccCce
Confidence            22                  3589999999999999988653  45678899999999884332  24789999999999


Q ss_pred             EEEEEcCCC
Q psy2762         248 VIIWTSNDY  256 (318)
Q Consensus       248 i~vw~~~~~  256 (318)
                      |+|||.+-.
T Consensus       275 I~vWd~~~~  283 (362)
T KOG0294|consen  275 IKVWDIDME  283 (362)
T ss_pred             EEEEEcccc
Confidence            999998754

>KOG2048|consensus

Probab=99.87  E-value=1.3e-19  Score=164.74  Aligned_cols=249  Identities=20%  Similarity=0.292  Sum_probs=188.8

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      +..|.+++|+.+.+.||.+-.||.|-||++..          .+-+..++.++. ..|.+++|.   ++.+|+|.+.+|.
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~----------~w~~~~vi~g~~drsIE~L~W~---e~~RLFS~g~sg~   91 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSN----------NWFLEPVIHGPEDRSIESLAWA---EGGRLFSSGLSGS   91 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCC----------CceeeEEEecCCCCceeeEEEc---cCCeEEeecCCce
Confidence            56899999999999999999999999999973          344566777765 569999996   3789999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee-ecccccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~  170 (318)
                      |.-||+.+.+  +.+.++.-.+.|.+++.+|.  +..++.|+.||.+.+.+..++.  ..-.. +.-...++.+++|+|+
T Consensus        92 i~EwDl~~lk--~~~~~d~~gg~IWsiai~p~--~~~l~IgcddGvl~~~s~~p~~--I~~~r~l~rq~sRvLslsw~~~  165 (691)
T KOG2048|consen   92 ITEWDLHTLK--QKYNIDSNGGAIWSIAINPE--NTILAIGCDDGVLYDFSIGPDK--ITYKRSLMRQKSRVLSLSWNPT  165 (691)
T ss_pred             EEEEecccCc--eeEEecCCCcceeEEEeCCc--cceEEeecCCceEEEEecCCce--EEEEeecccccceEEEEEecCC
Confidence            9999998775  45556666789999999998  6789999999966555543332  11111 2234578899999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE--ccc----CCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK--LEN----HSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~--~~~----h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                                       +..||+|+.||.||+||...+.-....+  +.+    ...-|.+|.|-.     ...|++|..
T Consensus       166 -----------------~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-----d~tI~sgDS  223 (691)
T KOG2048|consen  166 -----------------GTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-----DSTIASGDS  223 (691)
T ss_pred             -----------------ccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-----cCcEEEecC
Confidence                             4679999999999999988764322111  111    223366666664     347999999


Q ss_pred             CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc-eE
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA-WQ  304 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~-~~  304 (318)
                      -|+|++||.....  .......|++-|.+++-.+++..+.++|-|+.+--+.....+. |.
T Consensus       224 ~G~V~FWd~~~gT--LiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv  282 (691)
T KOG2048|consen  224 AGTVTFWDSIFGT--LIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWV  282 (691)
T ss_pred             CceEEEEcccCcc--hhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcccee
Confidence            9999999987643  1222345788899999999999999999999998888776543 54

>KOG1034|consensus

Probab=99.87  E-value=1.5e-20  Score=157.88  Aligned_cols=265  Identities=19%  Similarity=0.295  Sum_probs=186.2

Q ss_pred             ecCCCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           8 VDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .+..|.+..+.++++-+    ..+||.+|.=|.|+|.|+.           .+++...+.+|.+.|+.+.+ +|...+++
T Consensus        84 ~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~-----------~~~~~~~~~ghG~sINeik~-~p~~~qlv  151 (385)
T KOG1034|consen   84 ADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVV-----------SGQCSKNYRGHGGSINEIKF-HPDRPQLV  151 (385)
T ss_pred             cCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecc-----------hhhhccceeccCccchhhhc-CCCCCcEE
Confidence            35568888898988654    3589999999999999997           35678889999999999999 56678999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEE-EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYY-EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      +|+|.|..||+|++++..++.++ .+.+|...|.+|.|+++  +.++++++.|.++.+|++....       +..+-.  
T Consensus       152 ls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~--gd~i~ScGmDhslk~W~l~~~~-------f~~~lE--  220 (385)
T KOG1034|consen  152 LSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLD--GDRIASCGMDHSLKLWRLNVKE-------FKNKLE--  220 (385)
T ss_pred             EEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCC--CCeeeccCCcceEEEEecChhH-------Hhhhhh--
Confidence            99999999999999998876654 35679999999999998  6799999999999999874211       111100  


Q ss_pred             ceeeeCCCCCC------------CccccccCCC---CCCccceEEEecCCCeEEEEEc-cCCe-----------EEEEEE
Q psy2762         163 NAVSWGPGIGS------------LSELDLKGSK---LGGVAKRLVSGGCDNLIKIWKQ-EGDK-----------WIEETK  215 (318)
Q Consensus       163 ~~~~~~p~~~~------------~~~~~~~~~~---~~~~~~~lasgs~d~~i~iwd~-~~~~-----------~~~~~~  215 (318)
                      .+..|+|++..            .+..+...++   ..-.+.++++=|.++.|..|.. +-++           .....+
T Consensus       221 ~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~  300 (385)
T KOG1034|consen  221 LSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGE  300 (385)
T ss_pred             hhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeE
Confidence            01122222100            0001111110   0001457899999999999986 2111           011233


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      ++-....|.-+.|+-+.  -+..||.|.+.|.|.+||++......-..+.  .-...|...+||.||..|+..++|++|.
T Consensus       301 ~~~~~c~iWfirf~~d~--~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vw  378 (385)
T KOG1034|consen  301 FDYPMCDIWFIRFAFDP--WQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVW  378 (385)
T ss_pred             eccCccceEEEEEeecH--HHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEE
Confidence            34444556667666542  3678999999999999999875421111111  1235799999999999999999999998


Q ss_pred             EEEE
Q psy2762         294 LWKE  297 (318)
Q Consensus       294 iW~~  297 (318)
                      -||.
T Consensus       379 rwdr  382 (385)
T KOG1034|consen  379 RWDR  382 (385)
T ss_pred             EEEe
Confidence            8874

>KOG1539|consensus

Probab=99.87  E-value=1.5e-19  Score=167.70  Aligned_cols=276  Identities=15%  Similarity=0.179  Sum_probs=201.5

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      +.++...|+++.=+|-=..+|.|-.+|+|.|+|+.           .++.+.+++.-.+.|++++|..+ -..+||+|+.
T Consensus       198 f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK-----------~dkil~sFk~d~g~VtslSFrtD-G~p~las~~~  265 (910)
T KOG1539|consen  198 FQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLK-----------FDKILMSFKQDWGRVTSLSFRTD-GNPLLASGRS  265 (910)
T ss_pred             ecccccceeEeccCCcceEEEEeccCceEEEEEcc-----------cCcEEEEEEccccceeEEEeccC-CCeeEEeccC
Confidence            45788899999888887889999999999999996           46788888855699999999643 2357788888


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSW  167 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~  167 (318)
                      .|.+.+||++..+... .....|.+.|....|-|.  ..++++.+.|+..++|-+..++......+. .+|..|..++.|
T Consensus       266 ~G~m~~wDLe~kkl~~-v~~nah~~sv~~~~fl~~--epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irf  342 (910)
T KOG1539|consen  266 NGDMAFWDLEKKKLIN-VTRNAHYGSVTGATFLPG--EPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRF  342 (910)
T ss_pred             CceEEEEEcCCCeeee-eeeccccCCcccceecCC--CceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheee
Confidence            8999999998765322 233478889999999997  568999999999999977655432222233 378887777666


Q ss_pred             CCCCC---------------------------C----------------------Ccccccc------------------
Q psy2762         168 GPGIG---------------------------S----------------------LSELDLK------------------  180 (318)
Q Consensus       168 ~p~~~---------------------------~----------------------~~~~~~~------------------  180 (318)
                      .-..+                           +                      ...+...                  
T Consensus       343 y~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~  422 (910)
T KOG1539|consen  343 YGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKR  422 (910)
T ss_pred             eccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcc
Confidence            42110                           0                      0000000                  


Q ss_pred             ------------------CCCCC------------CccceEEEecCCCeEEEEEccCCeEEEEEEc---ccCCCCeeEEE
Q psy2762         181 ------------------GSKLG------------GVAKRLVSGGCDNLIKIWKQEGDKWIEETKL---ENHSDWVRDVA  227 (318)
Q Consensus       181 ------------------~~~~~------------~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~---~~h~~~V~~v~  227 (318)
                                        ..++.            .=|++.+.|...|+|-+|+++.+-.  -..+   ..|..+|++|+
T Consensus       423 ~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~--r~sf~~~~ah~~~V~gla  500 (910)
T KOG1539|consen  423 SAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIH--RKSFGDSPAHKGEVTGLA  500 (910)
T ss_pred             eEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCee--ecccccCccccCceeEEE
Confidence                              00000            0023567788899999999998732  2334   58999999999


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcc----------------------------ee-----------eEEeeecC
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVT----------------------------WT-----------PFIMNTFD  268 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~----------------------------~~-----------~~~~~~~~  268 (318)
                      ....    ++.++|++.||.+++|+..+...                            ..           .+.+.+|.
T Consensus       501 ~D~~----n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~  576 (910)
T KOG1539|consen  501 VDGT----NRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHG  576 (910)
T ss_pred             ecCC----CceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccc
Confidence            8764    77899999999999999877430                            00           01234677


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      +.|++++|||||++|++++-|++||+||+-+++...+
T Consensus       577 nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~  613 (910)
T KOG1539|consen  577 NRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDG  613 (910)
T ss_pred             cceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeee
Confidence            8999999999999999999999999999988755443

>KOG2096|consensus

Probab=99.86  E-value=3e-20  Score=155.62  Aligned_cols=223  Identities=17%  Similarity=0.242  Sum_probs=145.0

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEE-EEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFK-YYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~-~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +.+|++|.++|++++|+.  +|++||+++.|++|+||+...-   ...+ ...++  -+..+.|.|.||.... +++.-.
T Consensus        79 ~~~LKgH~~~vt~~~FsS--dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve--~dhpT~V~FapDc~s~-vv~~~~  153 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSS--DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVE--YDHPTRVVFAPDCKSV-VVSVKR  153 (420)
T ss_pred             hhhhhccCCceeeeEEcC--CCceeEEEeCCceEEEEecchhhhhhhhHhhcccc--CCCceEEEECCCcceE-EEEEcc
Confidence            578999999999999974  6999999999999999987531   1111 11111  2245788999997544 444445


Q ss_pred             CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762         135 DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       135 d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~  214 (318)
                      ..++++|....... .   ...-|..+.--+.|. .+.+...+++   -..+.+.+|++++.|.+|-||++++..   +.
T Consensus       154 g~~l~vyk~~K~~d-G---~~~~~~v~~D~~~f~-~kh~v~~i~i---GiA~~~k~imsas~dt~i~lw~lkGq~---L~  222 (420)
T KOG2096|consen  154 GNKLCVYKLVKKTD-G---SGSHHFVHIDNLEFE-RKHQVDIINI---GIAGNAKYIMSASLDTKICLWDLKGQL---LQ  222 (420)
T ss_pred             CCEEEEEEeeeccc-C---CCCcccccccccccc-hhcccceEEE---eecCCceEEEEecCCCcEEEEecCCce---ee
Confidence            66788876532211 0   000000000000010 0011111110   011226899999999999999998432   22


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce------eeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW------TPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~------~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      .+......-+..+.||+    |++|++++.---|+||...=....      ....+.+|+..|..++|||+.+..++++.
T Consensus       223 ~idtnq~~n~~aavSP~----GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSk  298 (420)
T KOG2096|consen  223 SIDTNQSSNYDAAVSPD----GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSK  298 (420)
T ss_pred             eeccccccccceeeCCC----CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEec
Confidence            33333233456788996    999999999999999975322111      13467899999999999999999999999


Q ss_pred             CCeEEEEEECCCC
Q psy2762         289 DNSVSLWKENTDG  301 (318)
Q Consensus       289 D~~v~iW~~~~~~  301 (318)
                      ||+.||||++..+
T Consensus       299 DG~wriwdtdVrY  311 (420)
T KOG2096|consen  299 DGKWRIWDTDVRY  311 (420)
T ss_pred             CCcEEEeeccceE
Confidence            9999999988744

>KOG1523|consensus

Probab=99.86  E-value=1.5e-19  Score=151.44  Aligned_cols=266  Identities=19%  Similarity=0.323  Sum_probs=205.6

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .++|+|.+|++|...+|.+-....|.||.+...        +-.+...+++.|...|++|.|++  ..++|++++.|+..
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~--------~~w~~~htls~Hd~~vtgvdWap--~snrIvtcs~drna   79 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGA--------DLWEPAHTLSEHDKIVTGVDWAP--KSNRIVTCSHDRNA   79 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCC--------CCceeceehhhhCcceeEEeecC--CCCceeEccCCCCc
Confidence            569999999999999999999999999998632        23677899999999999999974  47899999999999


Q ss_pred             EEEeC-CCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCC
Q psy2762          93 IIWRG-DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPG  170 (318)
Q Consensus        93 ~vWd~-~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~  170 (318)
                      .||.. ..+.++++..+..++..+.+|.|+|.  +..+|+|+.-..|.+|-++..+.-|-.+.++ .+...|.++.|+|+
T Consensus        80 yVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~--enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpn  157 (361)
T KOG1523|consen   80 YVWTQPSGGTWKPTLVLLRINRAATCVKWSPK--ENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPN  157 (361)
T ss_pred             cccccCCCCeeccceeEEEeccceeeEeecCc--CceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCC
Confidence            99987 66778888788889999999999998  5579999999999999887665444334444 56778999999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEc-----cCCe----E---E----EEEEcccCCCCeeEEEEccCCCC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ-----EGDK----W---I----EETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~-----~~~~----~---~----~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                                       ...||.||.|+++|||..     +.++    +   .    .+.++....++|..+.|+|+   
T Consensus       158 -----------------nVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~s---  217 (361)
T KOG1523|consen  158 -----------------NVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPS---  217 (361)
T ss_pred             -----------------cceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCC---
Confidence                             357999999999999952     2211    0   0    11223345678999999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecccc
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKTS  313 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~  313 (318)
                       |..|+=.+.|.++.+-|....... +......+-+..++.|-.+. .++.++.|-.=.++..+.+|.|.....++.-+
T Consensus       218 -G~~lawv~Hds~v~~~da~~p~~~-v~~~~~~~lP~ls~~~ise~-~vv~ag~~c~P~lf~~~~~~~l~~~~~ld~p~  293 (361)
T KOG1523|consen  218 -GNRLAWVGHDSTVSFVDAAGPSER-VQSVATAQLPLLSVSWISEN-SVVAAGYDCGPVLFVTDEEGGLSFARRLDAPK  293 (361)
T ss_pred             -CCEeeEecCCCceEEeecCCCchh-ccchhhccCCceeeEeecCC-ceeecCCCCCceEEEeccccceeeehhcCCcc
Confidence             889999999999999998776422 22222334678899998655 45556666444566667777888777776543

>KOG1188|consensus

Probab=99.86  E-value=2.5e-20  Score=157.31  Aligned_cols=238  Identities=19%  Similarity=0.304  Sum_probs=177.2

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~  105 (318)
                      ..+|.+-..|+|++||..           +++.+..+++|.+.++.++|.....+..+.||+.||+|++||++..+.+.+
T Consensus        41 ~~vav~lSngsv~lyd~~-----------tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~  109 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKG-----------TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR  109 (376)
T ss_pred             eeEEEEecCCeEEEEecc-----------chhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh
Confidence            457777789999999986           456788999999999999997543578899999999999999988766566


Q ss_pred             EEecCCC-cCeEEEEeeCCCCCcEEEEeec----CCeEEEEEeecCCCCcceee-ecccccccceeeeCCCCCCCccccc
Q psy2762         106 YEYNNHD-SSVNSIAWAPKEFGLILACGSS----DGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDL  179 (318)
Q Consensus       106 ~~~~~h~-~~v~~v~~~p~~~~~~lasgs~----d~~i~i~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~  179 (318)
                      +.+..+. .+-.|++.+-.  ..++++|+.    +-.|.+||.+...+.  +.. ...|...|+.+.|+|..        
T Consensus       110 ~~~~~~~~~~f~~ld~nck--~~ii~~GtE~~~s~A~v~lwDvR~~qq~--l~~~~eSH~DDVT~lrFHP~~--------  177 (376)
T KOG1188|consen  110 ISWTQQSGTPFICLDLNCK--KNIIACGTELTRSDASVVLWDVRSEQQL--LRQLNESHNDDVTQLRFHPSD--------  177 (376)
T ss_pred             eeccCCCCCcceEeeccCc--CCeEEeccccccCceEEEEEEeccccch--hhhhhhhccCcceeEEecCCC--------
Confidence            6666665 46677877644  467888765    557889998765431  222 34799999999999974        


Q ss_pred             cCCCCCCccceEEEecCCCeEEEEEccCCe-EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc
Q psy2762         180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT  258 (318)
Q Consensus       180 ~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~  258 (318)
                              -..|++||.||-|.|||++..+ -..+.....|...|.++.|.-..   -..|.+-+.+.+..+|+++...+
T Consensus       178 --------pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~---ykrI~clTH~Etf~~~ele~~~~  246 (376)
T KOG1188|consen  178 --------PNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKK---YKRIMCLTHMETFAIYELEDGSE  246 (376)
T ss_pred             --------CCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCC---cceEEEEEccCceeEEEccCCCh
Confidence                    3579999999999999976542 11122335677889999998751   23588888899999998766310


Q ss_pred             e-----------------------------------------------------------eeEEee-ecCCcEEEEEEcC
Q psy2762         259 W-----------------------------------------------------------TPFIMN-TFDDVVWNVSWSL  278 (318)
Q Consensus       259 ~-----------------------------------------------------------~~~~~~-~~~~~v~~v~~sp  278 (318)
                      .                                                           .+..+. +|.+.|.++.|..
T Consensus       247 ~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~  326 (376)
T KOG1188|consen  247 ETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDV  326 (376)
T ss_pred             hhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhc
Confidence            0                                                           000111 1345678888888


Q ss_pred             CCCEEEEEeCCCeEEEEEE
Q psy2762         279 TGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       279 dg~~l~s~~~D~~v~iW~~  297 (318)
                      .+..|.|||+||.|.+|..
T Consensus       327 ~~~~l~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  327 KNDVLYTGGEDGLLQAWKV  345 (376)
T ss_pred             ccceeeccCCCceEEEEec
Confidence            8999999999999999993

>KOG1445|consensus

Probab=99.85  E-value=3.2e-20  Score=167.65  Aligned_cols=126  Identities=26%  Similarity=0.337  Sum_probs=97.3

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +..+|.+.|+.+.|+| +..+||+||.|..|+||.+.++-..  ..+.   ....+.+.+-.|.++.| ||....+|+|+
T Consensus        74 ~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q--~LSa---pe~~~g~~~~~vE~l~f-HpTaDgil~s~  147 (1012)
T KOG1445|consen   74 ILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQ--KLSA---PEIDVGGGNVIVECLRF-HPTADGILASG  147 (1012)
T ss_pred             eeecccceeeccCccccchhhhhcccCCCeeEEEecCCCccc--ccCC---cceeecCCceEEEEeec-ccCcCceEEec
Confidence            4578999999999998 4568999999999999998632100  0000   11223344556889998 67666777776


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM  144 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~  144 (318)
                      + -|.+.|||+.+.+  ....+.+|...|.+..|+.|  +.++++...|++|+|+|.+
T Consensus       148 a-~g~v~i~D~stqk--~~~el~~h~d~vQSa~WseD--G~llatscKdkqirifDPR  200 (1012)
T KOG1445|consen  148 A-HGSVYITDISTQK--TAVELSGHTDKVQSADWSED--GKLLATSCKDKQIRIFDPR  200 (1012)
T ss_pred             c-CceEEEEEcccCc--eeecccCCchhhhccccccC--CceEeeecCCcceEEeCCc
Confidence            5 6899999998875  55678899999999999998  8899999999999999764

>KOG1007|consensus

Probab=99.85  E-value=1.4e-19  Score=149.79  Aligned_cols=259  Identities=23%  Similarity=0.333  Sum_probs=185.9

Q ss_pred             cCCCcceeeeeeecCCC-CEEEEeeCC-------CcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCC
Q psy2762           9 DTGHEDMIHDAEMDYLG-LYLATCSSD-------HTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQF   79 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g-~~l~s~s~D-------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~   79 (318)
                      +.-|-+.|..++-+|-. ++|+|+-.|       -.+.||.+....  ......+-.++..|. .|-+.|.|+.|- | +
T Consensus        59 f~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~--~~S~~~tlE~v~~Ldteavg~i~cvew~-P-n  134 (370)
T KOG1007|consen   59 FFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPL--GQSNSSTLECVASLDTEAVGKINCVEWE-P-N  134 (370)
T ss_pred             hhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEeccccc--CccccchhhHhhcCCHHHhCceeeEEEc-C-C
Confidence            34578899999998854 556665432       247899986331  112223344455665 567799999995 5 5


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEE-EEEE---ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWF-KYYE---YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~-~~~~---~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      +..||+-. |..|.+|+++.+..+ ....   -.++.....+-+|+|...+..+++ ..|+++..||.+...+.+   .+
T Consensus       135 s~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~~~---sI  209 (370)
T KOG1007|consen  135 SDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKKNN---SI  209 (370)
T ss_pred             CCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCCcEEEEEccchhhhc---ch
Confidence            78888876 899999998876431 1111   113455677889999766777766 458899999998665433   33


Q ss_pred             c-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC
Q psy2762         156 A-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       156 ~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      . +|...+..+.|.|++                ..+||+|+.||.|||||.+.-+ .+.+++.+|.-+|.+|.|+|.   
T Consensus       210 ~dAHgq~vrdlDfNpnk----------------q~~lvt~gDdgyvriWD~R~tk-~pv~el~~HsHWvW~VRfn~~---  269 (370)
T KOG1007|consen  210 EDAHGQRVRDLDFNPNK----------------QHILVTCGDDGYVRIWDTRKTK-FPVQELPGHSHWVWAVRFNPE---  269 (370)
T ss_pred             hhhhcceeeeccCCCCc----------------eEEEEEcCCCccEEEEeccCCC-ccccccCCCceEEEEEEecCc---
Confidence            3 788889999999975                3689999999999999977533 467789999999999999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcc---------------------------eeeEEeeecCCcEEEEEEcCCCCE-EEEE
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVT---------------------------WTPFIMNTFDDVVWNVSWSLTGDI-LTVS  286 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~---------------------------~~~~~~~~~~~~v~~v~~spdg~~-l~s~  286 (318)
                      -..+|.|+|.|..|.+|....-..                           ........|++.|+.++||.-..+ +||-
T Consensus       270 hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASL  349 (370)
T KOG1007|consen  270 HDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASL  349 (370)
T ss_pred             cceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEe
Confidence            467899999999999996443210                           011223356788999999987776 5666


Q ss_pred             eCCCeEEEEE
Q psy2762         287 CGDNSVSLWK  296 (318)
Q Consensus       287 ~~D~~v~iW~  296 (318)
                      +.||.|-|=+
T Consensus       350 SYDGRviIs~  359 (370)
T KOG1007|consen  350 SYDGRVIISS  359 (370)
T ss_pred             ccCceEEeec
Confidence            8899886644

>KOG2106|consensus

Probab=99.85  E-value=1.8e-18  Score=152.63  Aligned_cols=239  Identities=16%  Similarity=0.265  Sum_probs=179.0

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      +..|.|+.|.++|. .+||..+|+|.||+..           .....+...+|.+.|+++....  +|. |+||+-|+.|
T Consensus       246 kk~Vl~v~F~engd-viTgDS~G~i~Iw~~~-----------~~~~~k~~~aH~ggv~~L~~lr--~Gt-llSGgKDRki  310 (626)
T KOG2106|consen  246 KKFVLCVTFLENGD-VITGDSGGNILIWSKG-----------TNRISKQVHAHDGGVFSLCMLR--DGT-LLSGGKDRKI  310 (626)
T ss_pred             ceEEEEEEEcCCCC-EEeecCCceEEEEeCC-----------CceEEeEeeecCCceEEEEEec--Ccc-EeecCccceE
Confidence            46899999999997 5689999999999874           2344555569999999999753  455 5569999999


Q ss_pred             EEEeCCC------------------------------CcEEE--------EEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          93 IIWRGDN------------------------------GNWFK--------YYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        93 ~vWd~~~------------------------------~~~~~--------~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      ..||-.-                              ...+.        .....+|......++.+|+  ..++++++.
T Consensus       311 ~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps--~~q~~T~gq  388 (626)
T KOG2106|consen  311 ILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPS--KNQLLTCGQ  388 (626)
T ss_pred             EeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCC--hhheeeccC
Confidence            9997310                              00000        1123467778888999998  457889999


Q ss_pred             CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762         135 DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       135 d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~  214 (318)
                      |+++++|+  ..+-.|.    +.-..++.++.|+|.                 + .+|.|...|..-+.|.++...+...
T Consensus       389 dk~v~lW~--~~k~~wt----~~~~d~~~~~~fhps-----------------g-~va~Gt~~G~w~V~d~e~~~lv~~~  444 (626)
T KOG2106|consen  389 DKHVRLWN--DHKLEWT----KIIEDPAECADFHPS-----------------G-VVAVGTATGRWFVLDTETQDLVTIH  444 (626)
T ss_pred             cceEEEcc--CCceeEE----EEecCceeEeeccCc-----------------c-eEEEeeccceEEEEecccceeEEEE
Confidence            99999997  1221121    223457788899995                 4 7999999999999998876544443


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      +   .++++++++|+|+    |.+||.||.|+.|.||.+..........-.-+.++|..++||+|+++|.+-+.|-.+-.
T Consensus       445 ~---d~~~ls~v~ysp~----G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLy  517 (626)
T KOG2106|consen  445 T---DNEQLSVVRYSPD----GAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILY  517 (626)
T ss_pred             e---cCCceEEEEEcCC----CCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEE
Confidence            3   3889999999996    89999999999999998866432111111223389999999999999999999999999


Q ss_pred             EEECC
Q psy2762         295 WKENT  299 (318)
Q Consensus       295 W~~~~  299 (318)
                      |+-..
T Consensus       518 W~~~~  522 (626)
T KOG2106|consen  518 WKPSE  522 (626)
T ss_pred             Ecccc
Confidence            96443

>KOG0642|consensus

Probab=99.85  E-value=3.1e-20  Score=165.73  Aligned_cols=261  Identities=19%  Similarity=0.161  Sum_probs=172.4

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...-|.+.|+.+.|.|-...|++|+.||++++|++.+   ........-+++.++++|.++|-|+.+.  ..+..++|||
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk---~~~s~~~~~epi~tfraH~gPVl~v~v~--~n~~~~ysgg  363 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQK---AKKSAEKDVEPILTFRAHEGPVLCVVVP--SNGEHCYSGG  363 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcc---cCCccccceeeeEEEecccCceEEEEec--CCceEEEeec
Confidence            3456899999999999999999999999999999942   1122222346789999999999999985  3699999999


Q ss_pred             CCCeEEEEeCCCCc--------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          88 YDRKVIIWRGDNGN--------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      .||+|+.|++....        ......+.||.+.|..+++++.  ...|++++.||++++|.+..... ........|.
T Consensus       364 ~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~--~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g  440 (577)
T KOG0642|consen  364 IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSST--KDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHG  440 (577)
T ss_pred             cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeeccc--ccceeeecCCceEEeeccCCcCc-cccCCccccC
Confidence            99999999653210        1223356799999999999987  44688999999999998643321 0000111121


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc---cc--CCCCeeEEEEccCCCC
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL---EN--HSDWVRDVAWAPSWGL  234 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~---~~--h~~~V~~v~~sp~~~~  234 (318)
                      .| ..+.+-..            .    -...++...-+.--+.++...........   .+  ....++.|.++|.   
T Consensus       441 ~P-lsvd~~ss------------~----~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~---  500 (577)
T KOG0642|consen  441 YP-LSVDRTSS------------R----PAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPT---  500 (577)
T ss_pred             Cc-ceEeeccc------------h----hHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCC---
Confidence            11 11111110            0    00011111111111222222211111111   11  1233677888886   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                       ..+..++..|+.|+++|......  ......|...|.++++.|+|.+|.+++.|+.+++|+...
T Consensus       501 -~~~~~~~hed~~Ir~~dn~~~~~--l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~  562 (577)
T KOG0642|consen  501 -ADITFTAHEDRSIRFFDNKTGKI--LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV  562 (577)
T ss_pred             -CCeeEecccCCceeccccccccc--chheeeccceecceeecCCCceEEeecCCceeehhhccc
Confidence             56889999999999999876531  223345677899999999999999999999999998755

>KOG4378|consensus

Probab=99.84  E-value=9.2e-20  Score=160.50  Aligned_cols=245  Identities=16%  Similarity=0.195  Sum_probs=177.7

Q ss_pred             eeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcce--EEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGT--LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      .+..+.|+.... ..++-+.|+.|++|.-...         .+.  ++..+.+.  .-+|++..  ....++++||..+.
T Consensus        36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~---------~~~Vp~~~k~~gd--~~~Cv~~~--s~S~y~~sgG~~~~  102 (673)
T KOG4378|consen   36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK---------TPEVPRVRKLTGD--NAFCVACA--SQSLYEISGGQSGC  102 (673)
T ss_pred             cceeeeccccceEEEeecCCceeEEEecccCC---------CCccceeeccccc--hHHHHhhh--hcceeeeccCcCce
Confidence            377788876653 3455678999999976522         122  23333333  33444432  23589999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~  170 (318)
                      |+|||++..  .+...+..|.+.|.+|.++-.  ..++|+++..|-|+|-....+.+.   ..+. +....+.-+.|+|.
T Consensus       103 Vkiwdl~~k--l~hr~lkdh~stvt~v~YN~~--DeyiAsvs~gGdiiih~~~t~~~t---t~f~~~sgqsvRll~ys~s  175 (673)
T KOG4378|consen  103 VKIWDLRAK--LIHRFLKDHQSTVTYVDYNNT--DEYIASVSDGGDIIIHGTKTKQKT---TTFTIDSGQSVRLLRYSPS  175 (673)
T ss_pred             eeehhhHHH--HHhhhccCCcceeEEEEecCC--cceeEEeccCCcEEEEecccCccc---cceecCCCCeEEEeecccc
Confidence            999999843  234456789999999999976  578999999999999876544321   1122 12234556778875


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                      .                -..|.++|.+|.|.+||.....+.. .-.+.|..+...|||+|.   ...+|++.|.|+.|.+
T Consensus       176 k----------------r~lL~~asd~G~VtlwDv~g~sp~~-~~~~~HsAP~~gicfsps---ne~l~vsVG~Dkki~~  235 (673)
T KOG4378|consen  176 K----------------RFLLSIASDKGAVTLWDVQGMSPIF-HASEAHSAPCRGICFSPS---NEALLVSVGYDKKINI  235 (673)
T ss_pred             c----------------ceeeEeeccCCeEEEEeccCCCccc-chhhhccCCcCcceecCC---ccceEEEecccceEEE
Confidence            3                2468999999999999998775432 335789999999999997   5779999999999999


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ||......   ...-....+..+|+|+|+|.+|+.|...|.|-.||++-..+
T Consensus       236 yD~~s~~s---~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~  284 (673)
T KOG4378|consen  236 YDIRSQAS---TDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKA  284 (673)
T ss_pred             eecccccc---cceeeecCCcceeeecCCceEEEeecCCceEEEEecccCCC
Confidence            99875331   11224567899999999999999999999999999876443

>KOG1274|consensus

Probab=99.84  E-value=5.1e-19  Score=165.77  Aligned_cols=238  Identities=19%  Similarity=0.326  Sum_probs=176.1

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      |...|.+++.  ++.+|++|+.+++|.+|....+        +.+..+..+   +-++.+++|+.  +|+++|.||.|-.
T Consensus        55 ~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~--------~~~~iL~Rf---tlp~r~~~v~g--~g~~iaagsdD~~  119 (933)
T KOG1274|consen   55 SGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSG--------EEDTILARF---TLPIRDLAVSG--SGKMIAAGSDDTA  119 (933)
T ss_pred             cCceeEEEee--cccceEEeeccceEEEeeCCCC--------Cccceeeee---eccceEEEEec--CCcEEEeecCcee
Confidence            6667777765  5559999999999999998744        223344443   55788899975  5999999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-----ccccccceee
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-----AHTIGCNAVS  166 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-----~h~~~v~~~~  166 (318)
                      |++-+.....  +...+.+|.++|.+|.|+|.  +.+||+.+.||+|.+|++..+.-...+..+.     .....+..++
T Consensus       120 vK~~~~~D~s--~~~~lrgh~apVl~l~~~p~--~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~a  195 (933)
T KOG1274|consen  120 VKLLNLDDSS--QEKVLRGHDAPVLQLSYDPK--GNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLA  195 (933)
T ss_pred             EEEEeccccc--hheeecccCCceeeeeEcCC--CCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeee
Confidence            9999877654  45567899999999999998  7899999999999999986443111111111     1134577899


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|+.                 ..||....|+.|++|+..+-+..-.....-+...+.++.|+|.    |.|||+++.|+
T Consensus       196 W~Pk~-----------------g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPn----G~YiAAs~~~g  254 (933)
T KOG1274|consen  196 WHPKG-----------------GTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPN----GKYIAASTLDG  254 (933)
T ss_pred             ecCCC-----------------CeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCC----CcEEeeeccCC
Confidence            99973                 4688889999999999876543222222334455899999996    99999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      .|.|||.++..      ...+...|..++|-|+++-|.....-|..-+|
T Consensus       255 ~I~vWnv~t~~------~~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~  297 (933)
T KOG1274|consen  255 QILVWNVDTHE------RHEFKRAVCCEAWKPNANAITLITALGTLGVS  297 (933)
T ss_pred             cEEEEecccch------hccccceeEEEecCCCCCeeEEEeeccccccC
Confidence            99999998621      12334679999999998877555444444444

>KOG1009|consensus

Probab=99.83  E-value=1.9e-18  Score=148.88  Aligned_cols=149  Identities=21%  Similarity=0.389  Sum_probs=116.8

Q ss_pred             cceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      ..+|+.+.|.+++. .|+||+.|..||||-+++...+.-+  ..-..+..|..|..+|+++.|++  +|++||||+.+|.
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~--~~V~y~s~Ls~H~~aVN~vRf~p--~gelLASg~D~g~   88 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD--MKVEYLSSLSRHTRAVNVVRFSP--DGELLASGGDGGE   88 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCc--eeEEEeecccCCcceeEEEEEcC--CcCeeeecCCCce
Confidence            55999999998776 9999999999999998754211100  01134678899999999999974  5999999999999


Q ss_pred             EEEEeCC--------------CCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc
Q psy2762          92 VIIWRGD--------------NGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        92 v~vWd~~--------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      |.+|...              ...++....+.+|...|+.++|+|+  +.++++++.|..+++||...+.   ....+..
T Consensus        89 v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d--~~~l~s~s~dns~~l~Dv~~G~---l~~~~~d  163 (434)
T KOG1009|consen   89 VFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPD--SNFLVSGSVDNSVRLWDVHAGQ---LLAILDD  163 (434)
T ss_pred             EEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCC--CceeeeeeccceEEEEEeccce---eEeeccc
Confidence            9999755              1235555567789999999999999  6789999999999999985543   1233447


Q ss_pred             cccccceeeeCCC
Q psy2762         158 HTIGCNAVSWGPG  170 (318)
Q Consensus       158 h~~~v~~~~~~p~  170 (318)
                      |..-+..++|.|.
T Consensus       164 h~~yvqgvawDpl  176 (434)
T KOG1009|consen  164 HEHYVQGVAWDPL  176 (434)
T ss_pred             cccccceeecchh
Confidence            8888888999885

>KOG4227|consensus

Probab=99.83  E-value=3.9e-19  Score=152.62  Aligned_cols=258  Identities=15%  Similarity=0.171  Sum_probs=179.9

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..+|.+.|+++.|+.++++|+|||.|..++||+++.-+     ..+..+++.... -|...|+|++|..  .+.+|.||+
T Consensus        52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~-----~~k~~KPI~~~~~~H~SNIF~L~F~~--~N~~~~SG~  124 (609)
T KOG4227|consen   52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELM-----VRKTPKPIGVMEHPHRSNIFSLEFDL--ENRFLYSGE  124 (609)
T ss_pred             hhhhccccceeeeccCCeEEeecCCcceeeeechHHHH-----hhcCCCCceeccCccccceEEEEEcc--CCeeEecCC
Confidence            35899999999999999999999999999999986211     112334454443 4568999999963  478999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .+++|++-|+++.+.+-++.-....+.|+.+..+|.  ...+++.+.++.|.+||.+...+...+............+.|
T Consensus       125 ~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~--DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F  202 (609)
T KOG4227|consen  125 RWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPT--DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF  202 (609)
T ss_pred             CcceeEeeecccceeeeeecccCcccceeecccCCC--CceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence            999999999998754333322222348999999998  457888999999999998655433333333444455567788


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe------------------------------EE------
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK------------------------------WI------  211 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~------------------------------~~------  211 (318)
                      +|..                ...|++.++.+.+.+||.+...                              +.      
T Consensus       203 ~P~~----------------P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~  266 (609)
T KOG4227|consen  203 HPET----------------PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGK  266 (609)
T ss_pred             cCCC----------------ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccC
Confidence            8853                2457777777777777754210                              00      


Q ss_pred             ----------EEEEc-ccCCC-------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc---------------
Q psy2762         212 ----------EETKL-ENHSD-------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT---------------  258 (318)
Q Consensus       212 ----------~~~~~-~~h~~-------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~---------------  258 (318)
                                ....+ ..|+.       .+.+++|.-+     .-++|||.|=.|.+|.+.....               
T Consensus       267 ~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D-----~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~  341 (609)
T KOG4227|consen  267 CPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDD-----YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMP  341 (609)
T ss_pred             CCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecc-----eeeeccCcccceEEEecCCCccccCccccCcchhhCc
Confidence                      00000 11221       2445555543     3489999999999998643210               


Q ss_pred             ------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         259 ------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       259 ------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                            .....+.+|...++.|-|+|...+|.|.+-.+.++||.
T Consensus       342 ~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  342 SEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             hhheecceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence                  01224567888999999999999999999999999996

>KOG4328|consensus

Probab=99.83  E-value=2e-19  Score=156.91  Aligned_cols=220  Identities=19%  Similarity=0.285  Sum_probs=155.1

Q ss_pred             EEEecccccCeEEEEecCCCCC-cEEEEEECCCeEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFG-TLLASCSYDRKVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~-~~las~s~Dg~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ...++-|.+.|++++| ||... +++|+|+--|.|-+||+...  ..-..+-+..|..+|.++.|+|.+.. .+.+.|.|
T Consensus       179 ~~v~kv~~~Rit~l~f-HPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s-~i~ssSyD  256 (498)
T KOG4328|consen  179 LNVAKVTDRRITSLAF-HPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTS-QIYSSSYD  256 (498)
T ss_pred             cceeEecccceEEEEe-cccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChh-heeeeccC
Confidence            3456678999999999 66666 78899999999999999522  22234556789999999999998644 56677999


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK  215 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~  215 (318)
                      |+|++-|+...-.. ++..+..-......+.|+.+                 ...++.+..=|...+||++.+.- +...
T Consensus       257 GtiR~~D~~~~i~e-~v~s~~~d~~~fs~~d~~~e-----------------~~~vl~~~~~G~f~~iD~R~~~s-~~~~  317 (498)
T KOG4328|consen  257 GTIRLQDFEGNISE-EVLSLDTDNIWFSSLDFSAE-----------------SRSVLFGDNVGNFNVIDLRTDGS-EYEN  317 (498)
T ss_pred             ceeeeeeecchhhH-HHhhcCccceeeeeccccCC-----------------CccEEEeecccceEEEEeecCCc-cchh
Confidence            99999887432110 01011001111222223322                 23456666666899999876531 2334


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee-e-EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT-P-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~-~-~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      +.-|...|++|.++|-   ...+|||+|.|++++|||+.....-. | .....|...|.++.|||+|-.|++.+.|..+|
T Consensus       318 ~~lh~kKI~sv~~NP~---~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IR  394 (498)
T KOG4328|consen  318 LRLHKKKITSVALNPV---CPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIR  394 (498)
T ss_pred             hhhhhcccceeecCCC---CchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceE
Confidence            5668889999999997   47899999999999999988754322 2 12235778999999999877799999999999


Q ss_pred             EEEECCCCc
Q psy2762         294 LWKENTDGA  302 (318)
Q Consensus       294 iW~~~~~~~  302 (318)
                      |||...-++
T Consensus       395 v~dss~~sa  403 (498)
T KOG4328|consen  395 VFDSSCISA  403 (498)
T ss_pred             Eeecccccc
Confidence            999754333

>KOG1408|consensus

Probab=99.83  E-value=5.8e-19  Score=161.42  Aligned_cols=260  Identities=17%  Similarity=0.257  Sum_probs=185.5

Q ss_pred             eeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC-----CC----CCcEEEEEEC
Q psy2762          18 DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH-----PQ----FGTLLASCSY   88 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~-----~~----~~~~las~s~   88 (318)
                      ++.|++....|..-=.|..+.|||+.+..       +.++. ..+--|+.-||.+.-.+     +.    -...|.++|.
T Consensus       329 A~~Fdet~~klscVYndhSlYvWDvrD~~-------kvgk~-~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSs  400 (1080)
T KOG1408|consen  329 ACQFDETTDKLSCVYNDHSLYVWDVRDVN-------KVGKC-SSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSS  400 (1080)
T ss_pred             EEEecCCCceEEEEEcCceEEEEeccccc-------cccce-eeeeeccceeeeeccccccccCcccccCCccceeEecC
Confidence            36688888888777789999999997431       23443 33345888888875432     00    0346999999


Q ss_pred             CCeEEEEeCCCCcEEEE--------------E------Ee---------------cCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          89 DRKVIIWRGDNGNWFKY--------------Y------EY---------------NNHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~--------------~------~~---------------~~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      |++||+||+.....-.+              +      .+               -.....+.+|+++|+  +++||+|.
T Consensus       401 D~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~--gqhLAsGD  478 (1080)
T KOG1408|consen  401 DGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPD--GQHLASGD  478 (1080)
T ss_pred             CCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCC--cceecccC
Confidence            99999999864110000              0      00               011236899999998  78999999


Q ss_pred             cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE
Q psy2762         134 SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE  213 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~  213 (318)
                      .-|+++++++-.-.   ....+.+|...|.++.|+...-              ..+.||++|.|+-|+|||... ++...
T Consensus       479 r~GnlrVy~Lq~l~---~~~~~eAHesEilcLeyS~p~~--------------~~kLLASasrdRlIHV~Dv~r-ny~l~  540 (1080)
T KOG1408|consen  479 RGGNLRVYDLQELE---YTCFMEAHESEILCLEYSFPVL--------------TNKLLASASRDRLIHVYDVKR-NYDLV  540 (1080)
T ss_pred             ccCceEEEEehhhh---hhhheecccceeEEEeecCchh--------------hhHhhhhccCCceEEEEeccc-ccchh
Confidence            99999999873222   2335568999999999985321              025799999999999999865 34567


Q ss_pred             EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec---CCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         214 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF---DDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       214 ~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~---~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      +++.+|...|++|.|.-.+  .....+|+|.|+.|.+=..++...........+   ...++.++..|..++++++++|+
T Consensus       541 qtld~HSssITsvKFa~~g--ln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDr  618 (1080)
T KOG1408|consen  541 QTLDGHSSSITSVKFACNG--LNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDR  618 (1080)
T ss_pred             hhhcccccceeEEEEeecC--CceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEeccc
Confidence            8899999999999998752  236789999999877655443222111111111   24689999999999999999999


Q ss_pred             eEEEEEECCCCceEEEe
Q psy2762         291 SVSLWKENTDGAWQCIT  307 (318)
Q Consensus       291 ~v~iW~~~~~~~~~~~~  307 (318)
                      .|||+++..+.+.+..+
T Consensus       619 nirif~i~sgKq~k~FK  635 (1080)
T KOG1408|consen  619 NIRIFDIESGKQVKSFK  635 (1080)
T ss_pred             ceEEEeccccceeeeec
Confidence            99999999887766543

>KOG2055|consensus

Probab=99.83  E-value=4.1e-18  Score=148.98  Aligned_cols=248  Identities=13%  Similarity=0.155  Sum_probs=179.3

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~   91 (318)
                      .+.|+++.|+|...+|++|+.|++++||-++..         ....+..+.--.-+|.++.|. | +|. .++++|.-..
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk---------~N~~lqS~~l~~fPi~~a~f~-p-~G~~~i~~s~rrky  281 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGK---------VNPKLQSIHLEKFPIQKAEFA-P-NGHSVIFTSGRRKY  281 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCc---------cChhheeeeeccCccceeeec-C-CCceEEEecccceE
Confidence            468999999999999999999999999999732         344677777778899999996 4 477 9999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCc-CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDS-SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      ...||+.+++...+..+.++.. .+....++|+  +.+++..+..|.|.+.-.....    ......-.+.+..+.|+.+
T Consensus       282 ~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd--~~fia~~G~~G~I~lLhakT~e----li~s~KieG~v~~~~fsSd  355 (514)
T KOG2055|consen  282 LYSYDLETAKVTKLKPPYGVEEKSMERFEVSHD--SNFIAIAGNNGHIHLLHAKTKE----LITSFKIEGVVSDFTFSSD  355 (514)
T ss_pred             EEEeeccccccccccCCCCcccchhheeEecCC--CCeEEEcccCceEEeehhhhhh----hhheeeeccEEeeEEEecC
Confidence            9999998876544433334432 4667888998  5688999999999885432111    1011112345677888765


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       ++.|+..+.+|.|.+||+..+.+.....-+|.- .-+++|.|++    +.+||+||.-|.|.|
T Consensus       356 -----------------sk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v-~gts~~~S~n----g~ylA~GS~~GiVNI  413 (514)
T KOG2055|consen  356 -----------------SKELLASGGTGEVYVWNLRQNSCLHRFVDDGSV-HGTSLCISLN----GSYLATGSDSGIVNI  413 (514)
T ss_pred             -----------------CcEEEEEcCCceEEEEecCCcceEEEEeecCcc-ceeeeeecCC----CceEEeccCcceEEE
Confidence                             467888888899999999988655444433322 1356777775    889999999999999


Q ss_pred             EEcCCCcce---e----------------------------------eEE--ee------------ecCCcEEEEEEcCC
Q psy2762         251 WTSNDYVTW---T----------------------------------PFI--MN------------TFDDVVWNVSWSLT  279 (318)
Q Consensus       251 w~~~~~~~~---~----------------------------------~~~--~~------------~~~~~v~~v~~spd  279 (318)
                      ||.......   +                                  ..+  ++            +.-..|.+++|||.
T Consensus       414 Yd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~  493 (514)
T KOG2055|consen  414 YDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPN  493 (514)
T ss_pred             eccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCC
Confidence            985542100   0                                  000  00            00145999999999


Q ss_pred             CCEEEEEeCCCeEEEEEECC
Q psy2762         280 GDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       280 g~~l~s~~~D~~v~iW~~~~  299 (318)
                      |-+||.|.++|.|.+|++..
T Consensus       494 sG~lAvGNe~grv~l~kL~h  513 (514)
T KOG2055|consen  494 SGYLAVGNEAGRVHLFKLHH  513 (514)
T ss_pred             CceEEeecCCCceeeEeecc
Confidence            99999999999999998753

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.83  E-value=4.3e-17  Score=147.74  Aligned_cols=254  Identities=29%  Similarity=0.463  Sum_probs=190.5

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCc-EEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGT-LLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~-~las   85 (318)
                      ...+|...+..+.|.+.+..++.++.|+.+.+|+....          ...+..+.++. ..+..+.+. ..++. .++.
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  128 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNG----------EKLIKSLEGLHDSSVSKLALS-SPDGNSILLA  128 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCC----------ceeEEEEeccCCCceeeEEEE-CCCcceEEec
Confidence            34689999999999999999999999999999998632          12455666544 367777763 23455 5555


Q ss_pred             EEC-CCeEEEEeCCC-CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          86 CSY-DRKVIIWRGDN-GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        86 ~s~-Dg~v~vWd~~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      .+. |+.+.+|+... ..  ....+..|...|..++|+|+  +..++.++. |+.+++|+.....   ....+.+|...+
T Consensus       129 ~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v  201 (466)
T COG2319         129 SSSLDGTVKLWDLSTPGK--LIRTLEGHSESVTSLAFSPD--GKLLASGSSLDGTIKLWDLRTGK---PLSTLAGHTDPV  201 (466)
T ss_pred             cCCCCccEEEEEecCCCe--EEEEEecCcccEEEEEECCC--CCEEEecCCCCCceEEEEcCCCc---eEEeeccCCCce
Confidence            455 99999999886 32  34456689999999999998  446777775 9999999975422   234455789999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      ..++|+|+.                ...+++++.|+.|++||...+.... ..+.+|...+ -..|+|+    +..++++
T Consensus       202 ~~~~~~~~~----------------~~~~~~~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~-~~~~~~~----~~~~~~~  259 (466)
T COG2319         202 SSLAFSPDG----------------GLLIASGSSDGTIRLWDLSTGKLLR-STLSGHSDSV-VSSFSPD----GSLLASG  259 (466)
T ss_pred             EEEEEcCCc----------------ceEEEEecCCCcEEEEECCCCcEEe-eecCCCCcce-eEeECCC----CCEEEEe
Confidence            999999862                1256666999999999877554322 1577888775 3489996    5788899


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +.|+.+++|+...... .......|...|..+.|+|++..+++++.|+.+++|+......
T Consensus       260 ~~d~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  318 (466)
T COG2319         260 SSDGTIRLWDLRSSSS-LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKL  318 (466)
T ss_pred             cCCCcEEEeeecCCCc-EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCce
Confidence            9999999999886543 1222256788999999999999999998899999998666543

>KOG0646|consensus

Probab=99.83  E-value=1.2e-18  Score=152.40  Aligned_cols=206  Identities=17%  Similarity=0.276  Sum_probs=160.5

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      .++|.++.-+ | .|.+|+.|...|.+.+|.+.+|....  .+.+|-..|+|+.|+-|  +.++.+|+.||.|.+|.+..
T Consensus        81 Pg~v~al~s~-n-~G~~l~ag~i~g~lYlWelssG~LL~--v~~aHYQ~ITcL~fs~d--gs~iiTgskDg~V~vW~l~~  154 (476)
T KOG0646|consen   81 PGPVHALASS-N-LGYFLLAGTISGNLYLWELSSGILLN--VLSAHYQSITCLKFSDD--GSHIITGSKDGAVLVWLLTD  154 (476)
T ss_pred             ccceeeeecC-C-CceEEEeecccCcEEEEEeccccHHH--HHHhhccceeEEEEeCC--CcEEEecCCCccEEEEEEEe
Confidence            6789999854 3 58888888899999999999987433  45789999999999988  77999999999999997642


Q ss_pred             C---C---CCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         146 D---T---NSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       146 ~---~---~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      -   .   .......+..|+-+|.++..++..               ...+|+|+|.|.++|+||+..+.......+   
T Consensus       155 lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg---------------~~~rl~TaS~D~t~k~wdlS~g~LLlti~f---  216 (476)
T KOG0646|consen  155 LVSADNDHSVKPLHIFSDHTLSITDLQIGSGG---------------TNARLYTASEDRTIKLWDLSLGVLLLTITF---  216 (476)
T ss_pred             ecccccCCCccceeeeccCcceeEEEEecCCC---------------ccceEEEecCCceEEEEEeccceeeEEEec---
Confidence            1   1   111233455788888887766532               124799999999999999999876555544   


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--------------eeEEeeecCC--cEEEEEEcCCCCEE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--------------TPFIMNTFDD--VVWNVSWSLTGDIL  283 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--------------~~~~~~~~~~--~v~~v~~spdg~~l  283 (318)
                      ...++++..+|.    .+.+..|+.+|.|.+.++......              +...+.+|..  .|..++.+.||..|
T Consensus       217 p~si~av~lDpa----e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlL  292 (476)
T KOG0646|consen  217 PSSIKAVALDPA----ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLL  292 (476)
T ss_pred             CCcceeEEEccc----ccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEE
Confidence            345899999995    889999999999998876543210              1223456666  89999999999999


Q ss_pred             EEEeCCCeEEEEEECC
Q psy2762         284 TVSCGDNSVSLWKENT  299 (318)
Q Consensus       284 ~s~~~D~~v~iW~~~~  299 (318)
                      +||+.||.|+|||+..
T Consensus       293 lSGd~dg~VcvWdi~S  308 (476)
T KOG0646|consen  293 LSGDEDGKVCVWDIYS  308 (476)
T ss_pred             EeeCCCCCEEEEecch
Confidence            9999999999999644

>KOG0307|consensus

Probab=99.83  E-value=2.1e-20  Score=178.65  Aligned_cols=213  Identities=20%  Similarity=0.376  Sum_probs=165.2

Q ss_pred             CCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .-|++.|+.+.|++.+ ++||||+.||.|.|||++.. +.      ... .. -..-.+.|.+++|+. +....|||++.
T Consensus       113 ~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~-~t------P~~-~~-~~~~~~eI~~lsWNr-kvqhILAS~s~  182 (1049)
T KOG0307|consen  113 SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKP-ET------PFT-PG-SQAPPSEIKCLSWNR-KVSHILASGSP  182 (1049)
T ss_pred             cccCCceeeeeccccCCceeeccCCCCcEEEeccCCc-CC------CCC-CC-CCCCcccceEeccch-hhhHHhhccCC
Confidence            4699999999999865 59999999999999999742 10      000 00 122467899999975 56789999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCc--CeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCcceeeecccccccce
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDS--SVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +|++.|||++..+  ++..+..+..  .+..|+|+|+....++++...|+  .|.+||.+....  ..+.+.+|..++.+
T Consensus       183 sg~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass--P~k~~~~H~~Gils  258 (1049)
T KOG0307|consen  183 SGRAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS--PLKILEGHQRGILS  258 (1049)
T ss_pred             CCCceeccccCCC--cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC--chhhhcccccceee
Confidence            9999999998764  3444443333  47899999997655554444444  788999865542  34456799999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      ++|++.+                ..+|++++.|+.|-+|+..+++.  ..++....+|+..|.|+|.   +..+++.++.
T Consensus       259 lsWc~~D----------------~~lllSsgkD~~ii~wN~~tgEv--l~~~p~~~nW~fdv~w~pr---~P~~~A~asf  317 (1049)
T KOG0307|consen  259 LSWCPQD----------------PRLLLSSGKDNRIICWNPNTGEV--LGELPAQGNWCFDVQWCPR---NPSVMAAASF  317 (1049)
T ss_pred             eccCCCC----------------chhhhcccCCCCeeEecCCCceE--eeecCCCCcceeeeeecCC---Ccchhhhhee
Confidence            9999963                36899999999999999999864  4567778899999999996   5779999999


Q ss_pred             CCeEEEEEcCCCc
Q psy2762         245 DRKVIIWTSNDYV  257 (318)
Q Consensus       245 D~~i~vw~~~~~~  257 (318)
                      ||.|.|+.+.+..
T Consensus       318 dgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  318 DGKISIYSLQGTD  330 (1049)
T ss_pred             ccceeeeeeecCC
Confidence            9999999987643

>KOG0644|consensus

Probab=99.83  E-value=1.8e-20  Score=173.67  Aligned_cols=263  Identities=21%  Similarity=0.304  Sum_probs=183.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      +.||...|+|+.|...|.|+++|+.|..|+||.++           +..++.+++||.+.|+.++.+  ....++|++|.
T Consensus       186 LlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~e-----------t~~~lAs~rGhs~ditdlavs--~~n~~iaaaS~  252 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSME-----------TARCLASCRGHSGDITDLAVS--SNNTMIAAASN  252 (1113)
T ss_pred             HHhhhhheeeeeeccccceEeecCccceeeeeecc-----------chhhhccCCCCccccchhccc--hhhhhhhhccc
Confidence            46899999999999999999999999999999976           356789999999999999975  34789999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc-cccceeee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-IGCNAVSW  167 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-~~v~~~~~  167 (318)
                      |..|++|.+..+..  +..+.+|++.|++|+|+|-      ++.+.||++++||.+..........++... .-+..+.|
T Consensus       253 D~vIrvWrl~~~~p--vsvLrghtgavtaiafsP~------~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~  324 (1113)
T KOG0644|consen  253 DKVIRVWRLPDGAP--VSVLRGHTGAVTAIAFSPR------ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILF  324 (1113)
T ss_pred             CceEEEEecCCCch--HHHHhccccceeeeccCcc------ccCCCCCceEeccccccccccCCCCCCcccccceeeeec
Confidence            99999999887763  4456799999999999995      367889999999986221111111111000 00111111


Q ss_pred             CCCC----------CCC-cccc-c--c------CCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEE
Q psy2762         168 GPGI----------GSL-SELD-L--K------GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA  227 (318)
Q Consensus       168 ~p~~----------~~~-~~~~-~--~------~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~  227 (318)
                      ....          ... ..+. +  +      .+...+...+.+++-.+-.+.+|++.++.  ..+.+.+|...++.+.
T Consensus       325 ~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~--l~H~l~ghsd~~yvLd  402 (1113)
T KOG0644|consen  325 ENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ--LLHNLMGHSDEVYVLD  402 (1113)
T ss_pred             cccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccch--hhhhhcccccceeeee
Confidence            1100          000 0000 0  0      00011112344555566667889987774  3566789999999999


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++|=   +.....+++.||...|||.-.+....... .+| ..+...+||+||+.++..-+=|.+.|.....
T Consensus       403 ~Hpf---n~ri~msag~dgst~iwdi~eg~pik~y~-~gh-~kl~d~kFSqdgts~~lsd~hgql~i~g~gq  469 (1113)
T KOG0644|consen  403 VHPF---NPRIAMSAGYDGSTIIWDIWEGIPIKHYF-IGH-GKLVDGKFSQDGTSIALSDDHGQLYILGTGQ  469 (1113)
T ss_pred             ecCC---CcHhhhhccCCCceEeeecccCCcceeee-ccc-ceeeccccCCCCceEecCCCCCceEEeccCC
Confidence            9993   56778899999999999987654222222 233 3566889999999998887788888887544

>KOG2919|consensus

Probab=99.83  E-value=2.3e-18  Score=144.61  Aligned_cols=261  Identities=16%  Similarity=0.260  Sum_probs=177.2

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCC-CCCCcceEEEEec-ccccCeEEEEecC-----CCCCcEEEEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDD-SHSQKGTLIAELK-GHSGPVWQVAWAH-----PQFGTLLASCS   87 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~-~~~~~~~~~~~~~-~h~~~V~~v~~~~-----~~~~~~las~s   87 (318)
                      ....+.|+|||.-|++-+.|..+++|++....-... +....-+...+++ --...|+...|.+     ..+..++|+.+
T Consensus        51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS  130 (406)
T ss_pred             hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence            445688999999999999999999999852211111 1110011111222 1235577777752     12467999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCc---CeEEEEeeCCCCCcEEEEeecCCeEEEEEe-ecCCCCcceeeec-----cc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDS---SVNSIAWAPKEFGLILACGSSDGTISFLTY-MSDTNSWESRKIA-----AH  158 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~~~lasgs~d~~i~i~~~-~~~~~~~~~~~~~-----~h  158 (318)
                      .|.-|++||+-+++....+..-.|-.   ..-+++|+||  +..|.+ +....|+++|. +++. ........     +.
T Consensus       131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~D--Geqlfa-GykrcirvFdt~RpGr-~c~vy~t~~~~k~gq  206 (406)
T KOG2919|consen  131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPD--GEQLFA-GYKRCIRVFDTSRPGR-DCPVYTTVTKGKFGQ  206 (406)
T ss_pred             ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCC--CCeEee-cccceEEEeeccCCCC-CCcchhhhhcccccc
Confidence            99999999998887555433222333   3458999999  556655 56779999998 3332 12222222     22


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      ..-+.+++|+|-.                ...+|.|+.-..+-|++-..+.+  .+.+-+|.+.|+.++|.++    |..
T Consensus       207 ~giisc~a~sP~~----------------~~~~a~gsY~q~~giy~~~~~~p--l~llggh~gGvThL~~~ed----Gn~  264 (406)
T KOG2919|consen  207 KGIISCFAFSPMD----------------SKTLAVGSYGQRVGIYNDDGRRP--LQLLGGHGGGVTHLQWCED----GNK  264 (406)
T ss_pred             cceeeeeeccCCC----------------CcceeeecccceeeeEecCCCCc--eeeecccCCCeeeEEeccC----cCe
Confidence            4456778899853                35789999999999998766643  4566799999999999996    667


Q ss_pred             EEEEeC-CCeEEEEEcCCCcceeeEEeeecC----CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         239 IASCSQ-DRKVIIWTSNDYVTWTPFIMNTFD----DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       239 l~s~s~-D~~i~vw~~~~~~~~~~~~~~~~~----~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      |.+|+. |-.|-.||++.... ....+..|.    +.| -....|+|+.||+|+.||.|++||+..-|.|
T Consensus       265 lfsGaRk~dkIl~WDiR~~~~-pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~~gn~  332 (406)
T KOG2919|consen  265 LFSGARKDDKILCWDIRYSRD-PVYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKDLGNE  332 (406)
T ss_pred             ecccccCCCeEEEEeehhccc-hhhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCCCCCc
Confidence            888875 88899999987542 111233332    344 3577799999999999999999998875553

>KOG0303|consensus

Probab=99.82  E-value=1.8e-18  Score=148.58  Aligned_cols=227  Identities=19%  Similarity=0.322  Sum_probs=170.2

Q ss_pred             EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE-----EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-----FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      .+.||+++|..+.|. |.+...+||||.|.+|.||.+..+..     .++..+.+|...|.-|+|+|.. ..+|++++.|
T Consensus        76 ~v~GHt~~vLDi~w~-PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA-~NVLlsag~D  153 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWC-PFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTA-PNVLLSAGSD  153 (472)
T ss_pred             CccCccccccccccC-ccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccc-hhhHhhccCC
Confidence            467999999999997 46789999999999999999864321     2345678999999999999986 4577888999


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK  215 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~  215 (318)
                      .+|.+|+...+.   ....+. |..-|.+++|+-+                 |.+|++.+.|++|||||.++++.+... 
T Consensus       154 n~v~iWnv~tge---ali~l~-hpd~i~S~sfn~d-----------------Gs~l~TtckDKkvRv~dpr~~~~v~e~-  211 (472)
T KOG0303|consen  154 NTVSIWNVGTGE---ALITLD-HPDMVYSMSFNRD-----------------GSLLCTTCKDKKVRVIDPRRGTVVSEG-  211 (472)
T ss_pred             ceEEEEeccCCc---eeeecC-CCCeEEEEEeccC-----------------CceeeeecccceeEEEcCCCCcEeeec-
Confidence            999999986554   223333 9999999999986                 578999999999999999988765433 


Q ss_pred             cccCCCC-eeEEEEccCCCCCccEEEEEe---CCCeEEEEEcCCCcceeeEEeeecC--CcEEEEEEcCCCCEEEEEe-C
Q psy2762         216 LENHSDW-VRDVAWAPSWGLSKCMIASCS---QDRKVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSC-G  288 (318)
Q Consensus       216 ~~~h~~~-V~~v~~sp~~~~~~~~l~s~s---~D~~i~vw~~~~~~~~~~~~~~~~~--~~v~~v~~spdg~~l~s~~-~  288 (318)
                       .+|.+. -..+.|--+    +..+.||-   .++.+-|||..+...  +..+...+  ..|.-=-|.||...|..+| +
T Consensus       212 -~~heG~k~~Raifl~~----g~i~tTGfsr~seRq~aLwdp~nl~e--P~~~~elDtSnGvl~PFyD~dt~ivYl~GKG  284 (472)
T KOG0303|consen  212 -VAHEGAKPARAIFLAS----GKIFTTGFSRMSERQIALWDPNNLEE--PIALQELDTSNGVLLPFYDPDTSIVYLCGKG  284 (472)
T ss_pred             -ccccCCCcceeEEecc----CceeeeccccccccceeccCcccccC--cceeEEeccCCceEEeeecCCCCEEEEEecC
Confidence             456543 123445543    55444433   478899999876432  22233222  3566667889988876655 6


Q ss_pred             CCeEEEEEECCCC-ceEEEeeeccccccccC
Q psy2762         289 DNSVSLWKENTDG-AWQCITEMGKTSEQRAM  318 (318)
Q Consensus       289 D~~v~iW~~~~~~-~~~~~~~~~~~~~~~~~  318 (318)
                      |+.||-+.+..+- -..-+.++...+.||||
T Consensus       285 D~~IRYyEit~d~P~~hyln~f~S~epQRG~  315 (472)
T KOG0303|consen  285 DSSIRYFEITNEPPFVHYLNTFSSKEPQRGM  315 (472)
T ss_pred             CcceEEEEecCCCceeEEecccccCCccccc
Confidence            9999999987765 37788999999999987

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.82  E-value=7e-17  Score=141.82  Aligned_cols=230  Identities=10%  Similarity=0.079  Sum_probs=151.5

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCCCCcEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~~~~~~  103 (318)
                      +++++|++.|++|++||+.           +++.+..+..|.. +.+++|++  ++..+ ++++.|+.|++||..+++..
T Consensus         1 ~~~~~s~~~d~~v~~~d~~-----------t~~~~~~~~~~~~-~~~l~~~~--dg~~l~~~~~~~~~v~~~d~~~~~~~   66 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTA-----------TLEVTRTFPVGQR-PRGITLSK--DGKLLYVCASDSDTIQVIDLATGEVI   66 (300)
T ss_pred             CcEEEEecCCCEEEEEECC-----------CCceEEEEECCCC-CCceEECC--CCCEEEEEECCCCeEEEEECCCCcEE
Confidence            3578899999999999986           2456677776544 67899964  46655 67788999999999877543


Q ss_pred             EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCC
Q psy2762         104 KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK  183 (318)
Q Consensus       104 ~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~  183 (318)
                      .  .+..+. .+..++|+|+. ..+++++..|+.|.+||+....   ....+. +...+..++|+|+             
T Consensus        67 ~--~~~~~~-~~~~~~~~~~g-~~l~~~~~~~~~l~~~d~~~~~---~~~~~~-~~~~~~~~~~~~d-------------  125 (300)
T TIGR03866        67 G--TLPSGP-DPELFALHPNG-KILYIANEDDNLVTVIDIETRK---VLAEIP-VGVEPEGMAVSPD-------------  125 (300)
T ss_pred             E--eccCCC-CccEEEECCCC-CEEEEEcCCCCeEEEEECCCCe---EEeEee-CCCCcceEEECCC-------------
Confidence            3  233333 35678999984 3455566678999999974322   122222 2233567889986             


Q ss_pred             CCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCCCcceee
Q psy2762         184 LGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTWTP  261 (318)
Q Consensus       184 ~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~~~  261 (318)
                          +.++++++.++ .+++||..+++......   ....+..+.|+|+    +..| +++..|+.|++||+.+......
T Consensus       126 ----g~~l~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~s~d----g~~l~~~~~~~~~v~i~d~~~~~~~~~  194 (300)
T TIGR03866       126 ----GKIVVNTSETTNMAHFIDTKTYEIVDNVL---VDQRPRFAEFTAD----GKELWVSSEIGGTVSVIDVATRKVIKK  194 (300)
T ss_pred             ----CCEEEEEecCCCeEEEEeCCCCeEEEEEE---cCCCccEEEECCC----CCEEEEEcCCCCEEEEEEcCcceeeee
Confidence                46777777765 57788987765432221   2233578999996    5656 5555799999999987532111


Q ss_pred             EEeee---cC--CcEEEEEEcCCCCEEEEE-eCCCeEEEEEECCC
Q psy2762         262 FIMNT---FD--DVVWNVSWSLTGDILTVS-CGDNSVSLWKENTD  300 (318)
Q Consensus       262 ~~~~~---~~--~~v~~v~~spdg~~l~s~-~~D~~v~iW~~~~~  300 (318)
                      .....   +.  .....++|+|||++++.+ +.++.+.+||.+..
T Consensus       195 ~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~  239 (300)
T TIGR03866       195 ITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTY  239 (300)
T ss_pred             eeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence            11110   11  123468999999986544 55778999997654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1587|consensus

Probab=99.81  E-value=4.4e-18  Score=158.12  Aligned_cols=258  Identities=20%  Similarity=0.261  Sum_probs=179.4

Q ss_pred             cceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          13 EDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        13 ~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +..|++++|+| +..+|+.|..+|.|.+||+.....      .....+ .....|..+|+.+.|.....+.-|+|+|.||
T Consensus       242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~------~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG  315 (555)
T KOG1587|consen  242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSD------TPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDG  315 (555)
T ss_pred             CCceeEEEeccCCcceEEeeccCceEEEEEccCCCC------CCCcccccccccCCcCeEEEEEeccCCCCceEEEecCC
Confidence            56899999998 567888899999999999863310      001112 2234699999999998654456799999999


Q ss_pred             eEEEEeCCCCcE-EE--EEEec-------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC-c----cee-e
Q psy2762          91 KVIIWRGDNGNW-FK--YYEYN-------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS-W----ESR-K  154 (318)
Q Consensus        91 ~v~vWd~~~~~~-~~--~~~~~-------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~-~----~~~-~  154 (318)
                      .|..|+.+.-.. ..  .....       .-...+.+++|.|... ..++.|+.+|.|.--.. .+... .    +.. .
T Consensus       316 ~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p-~~FiVGTe~G~v~~~~r-~g~~~~~~~~~~~~~~  393 (555)
T KOG1587|consen  316 SICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDP-NHFIVGTEEGKVYKGCR-KGYTPAPEVSYKGHST  393 (555)
T ss_pred             cEeeeeccccccchhhcccccccccccccccccceeeEeeccCCC-ceEEEEcCCcEEEEEec-cCCccccccccccccc
Confidence            999998653110 00  00000       1234688999999764 46888999998865221 12111 1    111 2


Q ss_pred             ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      ...|..+|..+.++|...                ..|.+++ |-+||||...-.. .+...+..+...|++++|||.   
T Consensus       394 ~~~h~g~v~~v~~nPF~~----------------k~fls~g-DW~vriWs~~~~~-~Pl~~~~~~~~~v~~vaWSpt---  452 (555)
T KOG1587|consen  394 FITHIGPVYAVSRNPFYP----------------KNFLSVG-DWTVRIWSEDVIA-SPLLSLDSSPDYVTDVAWSPT---  452 (555)
T ss_pred             ccccCcceEeeecCCCcc----------------ceeeeec-cceeEeccccCCC-CcchhhhhccceeeeeEEcCc---
Confidence            236778899999998632                3455555 8999999865221 245667788888999999997   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ....|+++..||+|.|||+....................+.|++.|+.|+.|...|++.+|++..
T Consensus       453 rpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  453 RPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             CceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            57899999999999999987654322211222245667788898999999999999999999854

>KOG0321|consensus

Probab=99.81  E-value=2.1e-18  Score=155.99  Aligned_cols=266  Identities=16%  Similarity=0.187  Sum_probs=163.9

Q ss_pred             eeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          19 AEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        19 ~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      +.|++.   ...|+.+-.||.|.++|......    +. ....+....+|...|..+.|. | -...|++++.|.++++|
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~f----r~-ee~~lk~~~aH~nAifDl~wa-p-ge~~lVsasGDsT~r~W  127 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVF----RL-EERQLKKPLAHKNAIFDLKWA-P-GESLLVSASGDSTIRPW  127 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhc----ch-hhhhhcccccccceeEeeccC-C-CceeEEEccCCceeeee
Confidence            567643   34688899999999999863211    00 011245567899999999996 4 36789999999999999


Q ss_pred             eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-c--eeeec-ccccccceeeeCCCC
Q psy2762          96 RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-E--SRKIA-AHTIGCNAVSWGPGI  171 (318)
Q Consensus        96 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~--~~~~~-~h~~~v~~~~~~p~~  171 (318)
                      |+..+...-...+.+|...|.+++|.|.+ ..+|++|+.||.|.|||.+...... +  ...+- .|...-...  .|-.
T Consensus       128 dvk~s~l~G~~~~~GH~~SvkS~cf~~~n-~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptps--kp~~  204 (720)
T KOG0321|consen  128 DVKTSRLVGGRLNLGHTGSVKSECFMPTN-PAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPS--KPLK  204 (720)
T ss_pred             eeccceeecceeecccccccchhhhccCC-CcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCC--chhh
Confidence            99988755444467899999999999987 4689999999999999986433100 0  00000 122210000  0000


Q ss_pred             CCC--cccc---cc----CCCCCCccceEEEecC-CCeEEEEEccCCeE------EEEEEcccC---CCCeeEEEEccCC
Q psy2762         172 GSL--SELD---LK----GSKLGGVAKRLVSGGC-DNLIKIWKQEGDKW------IEETKLENH---SDWVRDVAWAPSW  232 (318)
Q Consensus       172 ~~~--~~~~---~~----~~~~~~~~~~lasgs~-d~~i~iwd~~~~~~------~~~~~~~~h---~~~V~~v~~sp~~  232 (318)
                      ...  ..+.   +.    ...+.+ ...||++|. |++|||||++....      .....+.-|   .-.+.+++...  
T Consensus       205 kr~~k~kA~s~ti~ssvTvv~fkD-e~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDs--  281 (720)
T KOG0321|consen  205 KRIRKWKAASNTIFSSVTVVLFKD-ESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDS--  281 (720)
T ss_pred             ccccccccccCceeeeeEEEEEec-cceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecC--
Confidence            000  0000   00    001112 246888888 99999999886421      111122223   11234444433  


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC--CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~--~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                        .|.+|...+.|++|.+|+.............++.  ..-..-..+||+.+|+||+.|..+.||.++.
T Consensus       282 --sGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~  348 (720)
T KOG0321|consen  282 --SGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSS  348 (720)
T ss_pred             --CCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecC
Confidence              2555555556999999998765422222222221  1112336789999999999999999999765

>KOG0303|consensus

Probab=99.81  E-value=3.5e-18  Score=146.83  Aligned_cols=215  Identities=20%  Similarity=0.282  Sum_probs=154.5

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +..||+++|..++|+| +...|||||.|.+|.||.+....- .-+   -...+..|.+|...|.-+.| ||...+.|+|+
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l-~~~---ltepvv~L~gH~rrVg~V~w-HPtA~NVLlsa  150 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGL-TRD---LTEPVVELYGHQRRVGLVQW-HPTAPNVLLSA  150 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCccc-ccC---cccceEEEeecceeEEEEee-cccchhhHhhc
Confidence            4579999999999998 557899999999999999853200 000   11357889999999999999 77788999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc-ccee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG-CNAV  165 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~-v~~~  165 (318)
                      |.|.+|.+||..++..  ...+. |...|++++|+-+  +.++++.+.|+.|+|||.+.+.-   +..-.+|.+. -..+
T Consensus       151 g~Dn~v~iWnv~tgea--li~l~-hpd~i~S~sfn~d--Gs~l~TtckDKkvRv~dpr~~~~---v~e~~~heG~k~~Ra  222 (472)
T KOG0303|consen  151 GSDNTVSIWNVGTGEA--LITLD-HPDMVYSMSFNRD--GSLLCTTCKDKKVRVIDPRRGTV---VSEGVAHEGAKPARA  222 (472)
T ss_pred             cCCceEEEEeccCCce--eeecC-CCCeEEEEEeccC--CceeeeecccceeEEEcCCCCcE---eeecccccCCCccee
Confidence            9999999999998863  33454 9999999999998  78999999999999999865541   2222466542 2334


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEe---cCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSG---GCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasg---s~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      .|-.+                 +..+-||   -.++.+-+||..+- ++....++...++ |.-=-|.|+    ...+..
T Consensus       223 ifl~~-----------------g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnG-vl~PFyD~d----t~ivYl  280 (472)
T KOG0303|consen  223 IFLAS-----------------GKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNG-VLLPFYDPD----TSIVYL  280 (472)
T ss_pred             EEecc-----------------CceeeeccccccccceeccCcccccCcceeEEeccCCc-eEEeeecCC----CCEEEE
Confidence            44333                 2323333   35667899986643 3334455554443 444456665    556666


Q ss_pred             EeC-CCeEEEEEcCCCc
Q psy2762         242 CSQ-DRKVIIWTSNDYV  257 (318)
Q Consensus       242 ~s~-D~~i~vw~~~~~~  257 (318)
                      +|. |+.||-|.+....
T Consensus       281 ~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  281 CGKGDSSIRYFEITNEP  297 (472)
T ss_pred             EecCCcceEEEEecCCC
Confidence            664 9999999987753

>KOG2106|consensus

Probab=99.80  E-value=5.7e-17  Score=143.31  Aligned_cols=205  Identities=19%  Similarity=0.382  Sum_probs=149.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCC----cCCCCC--------CC---------Cc----c----eEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRN----LKKDDS--------HS---------QK----G----TLIAE   61 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~----~~~~~~--------~~---------~~----~----~~~~~   61 (318)
                      .|.+.|.++.+-.+|.+|- |+.|..|..||-+..    .+.++.        +.         .+    |    ....+
T Consensus       285 aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~  363 (626)
T KOG2106|consen  285 AHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLT  363 (626)
T ss_pred             ecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEE
Confidence            8999999999999998665 999999999994311    111110        00         00    0    01234


Q ss_pred             ecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEE
Q psy2762          62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFL  141 (318)
Q Consensus        62 ~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~  141 (318)
                      ..+|.+..+.++- +| +...|++++.|+++++|+-.  +  ..++. ....++.|++|+|.  + .+|.|+..|...+.
T Consensus       364 v~gh~delwgla~-hp-s~~q~~T~gqdk~v~lW~~~--k--~~wt~-~~~d~~~~~~fhps--g-~va~Gt~~G~w~V~  433 (626)
T KOG2106|consen  364 VQGHGDELWGLAT-HP-SKNQLLTCGQDKHVRLWNDH--K--LEWTK-IIEDPAECADFHPS--G-VVAVGTATGRWFVL  433 (626)
T ss_pred             EEecccceeeEEc-CC-ChhheeeccCcceEEEccCC--c--eeEEE-EecCceeEeeccCc--c-eEEEeeccceEEEE
Confidence            5689999999996 66 46789999999999999822  2  22221 13577899999998  6 79999999988887


Q ss_pred             EeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--eEEEEEEcccC
Q psy2762         142 TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKLENH  219 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~~~~~~~~~~h  219 (318)
                      |.+..    ....+..-..+++.++|+|+                 +.+||.||.|+.|+||..+.+  ........  |
T Consensus       434 d~e~~----~lv~~~~d~~~ls~v~ysp~-----------------G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~--~  490 (626)
T KOG2106|consen  434 DTETQ----DLVTIHTDNEQLSVVRYSPD-----------------GAFLAVGSHDNHIYIYRVSANGRKYSRVGKC--S  490 (626)
T ss_pred             ecccc----eeEEEEecCCceEEEEEcCC-----------------CCEEEEecCCCeEEEEEECCCCcEEEEeeee--c
Confidence            76432    12233323667889999997                 579999999999999987654  33333333  3


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                      .++|+.+.||++    +++|.+-|-|-.|..|..
T Consensus       491 gs~ithLDwS~D----s~~~~~~S~d~eiLyW~~  520 (626)
T KOG2106|consen  491 GSPITHLDWSSD----SQFLVSNSGDYEILYWKP  520 (626)
T ss_pred             CceeEEeeecCC----CceEEeccCceEEEEEcc
Confidence            389999999996    889999999999999943

>KOG2048|consensus

Probab=99.80  E-value=2.5e-17  Score=149.99  Aligned_cols=253  Identities=18%  Similarity=0.203  Sum_probs=183.6

Q ss_pred             eecCCC-cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           7 LVDTGH-EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         7 ~~~~gH-~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      +..+|| ...|.+++|+ +|.+|+|.+.+|+|.-||+.           +.+....+..-.+.||+++.. | .++.++.
T Consensus        62 ~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~-----------~lk~~~~~d~~gg~IWsiai~-p-~~~~l~I  127 (691)
T KOG2048|consen   62 PVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLH-----------TLKQKYNIDSNGGAIWSIAIN-P-ENTILAI  127 (691)
T ss_pred             EEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecc-----------cCceeEEecCCCcceeEEEeC-C-ccceEEe
Confidence            344555 5689999998 56678888999999999996           467788888889999999985 4 4788999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccccccce
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNA  164 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~~  164 (318)
                      |+.||.+...++..+.......+...++.|.+|+|+|+  +..+++|+.||.|++||...+..... ..++.+-..+-..
T Consensus       128 gcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~--~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~  205 (691)
T KOG2048|consen  128 GCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPT--GTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPT  205 (691)
T ss_pred             ecCCceEEEEecCCceEEEEeecccccceEEEEEecCC--ccEEEecccCceEEEEEcCCCceEEEeeecccccccCCce
Confidence            99999877777776654333445556789999999998  67799999999999999755432110 0011121222233


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +.|+--.            +.  ...||+|-.-|+|++||...+.+.  +.+..|...|.++.-+++    +..+.++|.
T Consensus       206 iVWSv~~------------Lr--d~tI~sgDS~G~V~FWd~~~gTLi--qS~~~h~adVl~Lav~~~----~d~vfsaGv  265 (691)
T KOG2048|consen  206 IVWSVLF------------LR--DSTIASGDSAGTVTFWDSIFGTLI--QSHSCHDADVLALAVADN----EDRVFSAGV  265 (691)
T ss_pred             EEEEEEE------------ee--cCcEEEecCCceEEEEcccCcchh--hhhhhhhcceeEEEEcCC----CCeEEEccC
Confidence            4443210            00  136999999999999999888653  445678999999999985    678999999


Q ss_pred             CCeEEEEEcCCCcc-eeeE-EeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         245 DRKVIIWTSNDYVT-WTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       245 D~~i~vw~~~~~~~-~~~~-~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |+.|.-+...+... |... ....|...|.+++..++  .|.+||.|.+|-+=..
T Consensus       266 d~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s  318 (691)
T KOG2048|consen  266 DPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSS  318 (691)
T ss_pred             CCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccc
Confidence            99999987765432 3211 11235556888888877  8889999998877543

>KOG0649|consensus

Probab=99.80  E-value=2.9e-17  Score=133.12  Aligned_cols=244  Identities=18%  Similarity=0.276  Sum_probs=168.7

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .|.+-+++|.++||+.|+.+|.|.+..+++- ......+.....+-..++|.++|+.++|.    ..+|+||+ ||.|+-
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl-~s~sa~~~gk~~iv~eqahdgpiy~~~f~----d~~Lls~g-dG~V~g   85 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSL-DSGSAEPPGKLKIVPEQAHDGPIYYLAFH----DDFLLSGG-DGLVYG   85 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhh-hccccCCCCCcceeeccccCCCeeeeeee----hhheeecc-CceEEE
Confidence            5667789999999999999999999988632 11112222234456679999999999994    36788876 599998


Q ss_pred             EeCCCC----cEEEEEEe--cCCC-----cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          95 WRGDNG----NWFKYYEY--NNHD-----SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        95 Wd~~~~----~~~~~~~~--~~h~-----~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      |.-...    .++..+..  +.|.     ..|+++.+-|.+ +.++.+| .|+.+.-||++.++   -.+.+++|+.-+.
T Consensus        86 w~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~e-nSi~~Ag-GD~~~y~~dlE~G~---i~r~~rGHtDYvH  160 (325)
T KOG0649|consen   86 WEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSE-NSILFAG-GDGVIYQVDLEDGR---IQREYRGHTDYVH  160 (325)
T ss_pred             eeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCC-CcEEEec-CCeEEEEEEecCCE---EEEEEcCCcceee
Confidence            864321    11111111  1122     358899999986 4445444 79999999987664   2456789999888


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC--------CCCeeEEEEccCCCCC
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH--------SDWVRDVAWAPSWGLS  235 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h--------~~~V~~v~~sp~~~~~  235 (318)
                      ++.--..                 ...+.+|++||++||||.++.+++.......|        ..+|-+++-+.+    
T Consensus       161 ~vv~R~~-----------------~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed----  219 (325)
T KOG0649|consen  161 SVVGRNA-----------------NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED----  219 (325)
T ss_pred             eeeeccc-----------------CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc----
Confidence            7765221                 13699999999999999998876554433222        245677776543    


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                        .++ |+....+.+|.+....   +.......++|..|.|-  .++++++++.+.|.-|.++
T Consensus       220 --Wlv-CGgGp~lslwhLrsse---~t~vfpipa~v~~v~F~--~d~vl~~G~g~~v~~~~l~  274 (325)
T KOG0649|consen  220 --WLV-CGGGPKLSLWHLRSSE---STCVFPIPARVHLVDFV--DDCVLIGGEGNHVQSYTLN  274 (325)
T ss_pred             --eEE-ecCCCceeEEeccCCC---ceEEEecccceeEeeee--cceEEEeccccceeeeeec
Confidence              444 5566779999997754   23445667889999996  4478889988899988753

>KOG0642|consensus

Probab=99.80  E-value=6.9e-19  Score=157.21  Aligned_cols=217  Identities=20%  Similarity=0.190  Sum_probs=153.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.+|.++|.|+++++.+.+++|||.||+|+.|++. ...++++..+...+...+.||++.||.++++.  ..+.|++++
T Consensus       339 tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p-~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~--~~~~Llscs  415 (577)
T KOG0642|consen  339 TFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLP-PNQDPDDSYDPSVLSGTLLGHTDAVWLLALSS--TKDRLLSCS  415 (577)
T ss_pred             EEecccCceEEEEecCCceEEEeeccCceeeeeccC-CCCCcccccCcchhccceeccccceeeeeecc--cccceeeec
Confidence            456999999999999999999999999999999997 55666666655667788999999999999974  367899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---cc-----c
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AH-----T  159 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h-----~  159 (318)
                      .||||++|+...... +++....-.+.-.++++........++    +...+.+++.... ......+.   .-     .
T Consensus       416 ~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~----s~~~~~~~~~~~e-v~s~~~~~~s~~~~~~~~~  489 (577)
T KOG0642|consen  416 SDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLA----SFRFGYTSIDDME-VVSDLLIFESSASPGPRRY  489 (577)
T ss_pred             CCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhh----hcccccccchhhh-hhhheeeccccCCCccccc
Confidence            999999999876543 333322222333455555432112222    2222333221110 00000111   00     1


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ..++.+.++|.                 .....++.+|++||++|..++.+  .+....|...|+++++.|.    |-+|
T Consensus       490 ~~in~vVs~~~-----------------~~~~~~~hed~~Ir~~dn~~~~~--l~s~~a~~~svtslai~~n----g~~l  546 (577)
T KOG0642|consen  490 PQINKVVSHPT-----------------ADITFTAHEDRSIRFFDNKTGKI--LHSMVAHKDSVTSLAIDPN----GPYL  546 (577)
T ss_pred             CccceEEecCC-----------------CCeeEecccCCceeccccccccc--chheeeccceecceeecCC----CceE
Confidence            12456666665                 24688999999999999887754  5667789999999999996    8899


Q ss_pred             EEEeCCCeEEEEEcCCC
Q psy2762         240 ASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~  256 (318)
                      ++++.|+.+++|.+...
T Consensus       547 ~s~s~d~sv~l~kld~k  563 (577)
T KOG0642|consen  547 MSGSHDGSVRLWKLDVK  563 (577)
T ss_pred             EeecCCceeehhhccch
Confidence            99999999999987654

>KOG0290|consensus

Probab=99.79  E-value=2.5e-17  Score=136.63  Aligned_cols=253  Identities=16%  Similarity=0.224  Sum_probs=182.7

Q ss_pred             ceeeeeeecC--C-CCEEEEee----CCCcEEEEEcCCCcCCCCCCCCcceEEE-EecccccCeEEEEecCCCC---CcE
Q psy2762          14 DMIHDAEMDY--L-GLYLATCS----SDHTVKVFNLDRNLKKDDSHSQKGTLIA-ELKGHSGPVWQVAWAHPQF---GTL   82 (318)
Q Consensus        14 ~~v~~~~~~~--~-g~~l~s~s----~D~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~~~~~~---~~~   82 (318)
                      -.++++.|+.  + .-+||.||    ..++|.|-.++..         .+..+. .-..|.-+++.+.|.++..   .++
T Consensus        45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~---------s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdl  115 (364)
T KOG0290|consen   45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDED---------SGELVEDANFDHPYPVTKLMWIPDSKGVYPDL  115 (364)
T ss_pred             CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccC---------CCceeccCCCCCCCCccceEecCCccccCcch
Confidence            3667778773  2 34688787    4567777766421         233322 2247999999999986543   357


Q ss_pred             EEEEECCCeEEEEeCCC--CcEEE-----EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          83 LASCSYDRKVIIWRGDN--GNWFK-----YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~--~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      |||++  ..+|+|.+..  ++...     ..+-..+.+++++..|+.-+ ..++.+.|.|.++.|||+..+..-.-..++
T Consensus       116 LATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~d-p~~igtSSiDTTCTiWdie~~~~~~vkTQL  192 (364)
T KOG0290|consen  116 LATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVD-PNLIGTSSIDTTCTIWDIETGVSGTVKTQL  192 (364)
T ss_pred             hhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCC-cceeEeecccCeEEEEEEeeccccceeeEE
Confidence            87764  5899998763  22111     11122467789999999876 468889999999999999765221123456


Q ss_pred             cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC--CCCeeEEEEccCCC
Q psy2762         156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH--SDWVRDVAWAPSWG  233 (318)
Q Consensus       156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~  233 (318)
                      -+|...|..++|..+.                .+.||+.|.||.||+||++..+... ..++..  ..+...++|++.  
T Consensus       193 IAHDKEV~DIaf~~~s----------------~~~FASvgaDGSvRmFDLR~leHST-IIYE~p~~~~pLlRLswnkq--  253 (364)
T KOG0290|consen  193 IAHDKEVYDIAFLKGS----------------RDVFASVGADGSVRMFDLRSLEHST-IIYEDPSPSTPLLRLSWNKQ--  253 (364)
T ss_pred             EecCcceeEEEeccCc----------------cceEEEecCCCcEEEEEecccccce-EEecCCCCCCcceeeccCcC--
Confidence            6899999999998742                3579999999999999998765432 233332  467888999986  


Q ss_pred             CCccEEEEEeCCC-eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC-CCEEEEEeCCCeEEEEEECC
Q psy2762         234 LSKCMIASCSQDR-KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT-GDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       234 ~~~~~l~s~s~D~-~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd-g~~l~s~~~D~~v~iW~~~~  299 (318)
                       +..++|+-..|. .|.|-|++-+. .....+..|++.|+.++|.|. ...|.|+|+|-.+-|||+..
T Consensus       254 -DpnymATf~~dS~~V~iLDiR~P~-tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q  319 (364)
T KOG0290|consen  254 -DPNYMATFAMDSNKVVILDIRVPC-TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ  319 (364)
T ss_pred             -CchHHhhhhcCCceEEEEEecCCC-cceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence             788999988774 58888887654 234567899999999999997 46788999999999999865

>KOG1007|consensus

Probab=99.79  E-value=6.9e-18  Score=139.81  Aligned_cols=219  Identities=21%  Similarity=0.295  Sum_probs=166.7

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~   82 (318)
                      ++..+++.|-+.|.|+.|.|++..|++-. |..|.+|+++.+..      ....+.... .+|....++-+|+|..+++.
T Consensus       114 ~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~------~vaev~ss~s~e~~~~ftsg~WspHHdgnq  186 (370)
T KOG1007|consen  114 CVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSK------IVAEVLSSESAEMRHSFTSGAWSPHHDGNQ  186 (370)
T ss_pred             HhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcc------hheeecccccccccceecccccCCCCccce
Confidence            45567777888999999999999998755 89999999974310      001111111 23566778889987678888


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEe-cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      +++.+ |++++.||.++..  +.+.+ ..|...|..+.|+|.. +.+|++|+.||.|+|||.+..+  ..++.+.+|.--
T Consensus       187 v~tt~-d~tl~~~D~RT~~--~~~sI~dAHgq~vrdlDfNpnk-q~~lvt~gDdgyvriWD~R~tk--~pv~el~~HsHW  260 (370)
T KOG1007|consen  187 VATTS-DSTLQFWDLRTMK--KNNSIEDAHGQRVRDLDFNPNK-QHILVTCGDDGYVRIWDTRKTK--FPVQELPGHSHW  260 (370)
T ss_pred             EEEeC-CCcEEEEEccchh--hhcchhhhhcceeeeccCCCCc-eEEEEEcCCCccEEEEeccCCC--ccccccCCCceE
Confidence            88764 8999999998654  23333 4688889999999974 7899999999999999986544  456677789989


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC------------------------eEE---EEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------------------------KWI---EET  214 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------------------------~~~---~~~  214 (318)
                      |.++.|+|.-                .+.|++||.|..|.+|....-                        ++.   ++.
T Consensus       261 vW~VRfn~~h----------------dqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~  324 (370)
T KOG1007|consen  261 VWAVRFNPEH----------------DQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLE  324 (370)
T ss_pred             EEEEEecCcc----------------ceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccc
Confidence            9999999963                468999999999999964320                        011   124


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                      ++..|.+.|+++.||.-   +.-.|||-|.||.+.|=.+.
T Consensus       325 tydehEDSVY~~aWSsa---dPWiFASLSYDGRviIs~V~  361 (370)
T KOG1007|consen  325 TYDEHEDSVYALAWSSA---DPWIFASLSYDGRVIISSVP  361 (370)
T ss_pred             cccccccceEEEeeccC---CCeeEEEeccCceEEeecCC
Confidence            56789999999999975   78899999999999887654

>KOG4378|consensus

Probab=99.78  E-value=9.7e-18  Score=147.88  Aligned_cols=225  Identities=17%  Similarity=0.227  Sum_probs=171.9

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .-.|++......|+++||..+.|+|||+..           .-+.+.+++|...|+++.|+.  ...+||+++..|.|.|
T Consensus        81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~-----------kl~hr~lkdh~stvt~v~YN~--~DeyiAsvs~gGdiii  147 (673)
T KOG4378|consen   81 NAFCVACASQSLYEISGGQSGCVKIWDLRA-----------KLIHRFLKDHQSTVTYVDYNN--TDEYIASVSDGGDIII  147 (673)
T ss_pred             hHHHHhhhhcceeeeccCcCceeeehhhHH-----------HHHhhhccCCcceeEEEEecC--CcceeEEeccCCcEEE
Confidence            445555566679999999999999999962           235678899999999999974  3689999999999999


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL  174 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~  174 (318)
                      -...++.....++. .-...|.-+.++|.. -.+|.+++.+|.|.+||......  .......|..|+..+.|+|..   
T Consensus       148 h~~~t~~~tt~f~~-~sgqsvRll~ys~sk-r~lL~~asd~G~VtlwDv~g~sp--~~~~~~~HsAP~~gicfspsn---  220 (673)
T KOG4378|consen  148 HGTKTKQKTTTFTI-DSGQSVRLLRYSPSK-RFLLSIASDKGAVTLWDVQGMSP--IFHASEAHSAPCRGICFSPSN---  220 (673)
T ss_pred             EecccCccccceec-CCCCeEEEeeccccc-ceeeEeeccCCeEEEEeccCCCc--ccchhhhccCCcCcceecCCc---
Confidence            99877653232221 123457789999975 46888999999999999843321  122345799999999999964   


Q ss_pred             ccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       175 ~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                                   ...|++.+.|..|.+||...........+   ..+...|+|+|+    |.+|+.|...|.|..||.+
T Consensus       221 -------------e~l~vsVG~Dkki~~yD~~s~~s~~~l~y---~~Plstvaf~~~----G~~L~aG~s~G~~i~YD~R  280 (673)
T KOG4378|consen  221 -------------EALLVSVGYDKKINIYDIRSQASTDRLTY---SHPLSTVAFSEC----GTYLCAGNSKGELIAYDMR  280 (673)
T ss_pred             -------------cceEEEecccceEEEeecccccccceeee---cCCcceeeecCC----ceEEEeecCCceEEEEecc
Confidence                         35799999999999999875432222222   235789999996    9999999999999999987


Q ss_pred             CCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762         255 DYVTWTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       255 ~~~~~~~~~~~~~~~~v~~v~~spdg  280 (318)
                      ... .+...+..|...|.+|+|-|--
T Consensus       281 ~~k-~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  281 STK-APVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             cCC-CCceEeeecccceeEEEeeecc
Confidence            643 2345677899999999998763

>KOG0322|consensus

Probab=99.78  E-value=1.3e-17  Score=136.56  Aligned_cols=251  Identities=14%  Similarity=0.161  Sum_probs=173.8

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +.+|...|+++.|..+++ |++|..-|.|++|++...           .....++ .|...|+.+.-. |  +..|.+=+
T Consensus        10 LRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~-----------r~~~~~r~~g~~~it~lq~~-p--~d~l~tqg   74 (323)
T KOG0322|consen   10 LRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTE-----------RDLPLIRLFGRLFITNLQSI-P--NDSLDTQG   74 (323)
T ss_pred             eccccchheehhhccchh-hhcccccceEEEEEeecC-----------ccchhhhhhccceeeceeec-C--CcchhhcC
Confidence            348999999999988876 889999999999999632           2234556 467778888753 3  47788999


Q ss_pred             CCCeEEEEeCCCCcEEEEEE------------ec---------------------------------------CCCcCeE
Q psy2762          88 YDRKVIIWRGDNGNWFKYYE------------YN---------------------------------------NHDSSVN  116 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~------------~~---------------------------------------~h~~~v~  116 (318)
                      .|.++.+|++.-+..+.+..            +.                                       +..+.++
T Consensus        75 Rd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvm  154 (323)
T KOG0322|consen   75 RDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVM  154 (323)
T ss_pred             CCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCcee
Confidence            99999999986422111100            00                                       0113344


Q ss_pred             EEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCcce-------eeecccccccceeeeCCCCCCCccccccCCCCCCcc
Q psy2762         117 SIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWES-------RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA  188 (318)
Q Consensus       117 ~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~-------~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~  188 (318)
                      |..+..++ ...++++|-.+|.+.+||...+....+.       ...+.|.+++.++.|.+..              +.|
T Consensus       155 c~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~--------------~rG  220 (323)
T KOG0322|consen  155 CQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSC--------------DRG  220 (323)
T ss_pred             eeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhh--------------cCC
Confidence            44432221 2347888899999999998765422111       1234688889888887632              112


Q ss_pred             ceEEEecCCCeEEEEEccCC--eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         189 KRLVSGGCDNLIKIWKQEGD--KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       189 ~~lasgs~d~~i~iwd~~~~--~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                         ++|+.+..+-.|.+...  .+..-.+++-.+-.|..+..=||    ++.+||+|.|+.||||+-++..  ....+.-
T Consensus       221 ---isgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD----~KIlATAGWD~RiRVyswrtl~--pLAVLky  291 (323)
T KOG0322|consen  221 ---ISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPD----GKILATAGWDHRIRVYSWRTLN--PLAVLKY  291 (323)
T ss_pred             ---cCCCccccceeeeeccccCcccccceEEecCCCccceEEccC----CcEEeecccCCcEEEEEeccCC--chhhhhh
Confidence               67777778888876532  21111111222334778888886    8999999999999999877754  3456667


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |.+.|++|+|+||...+|+++.|+.|-+|++
T Consensus       292 Hsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  292 HSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             hhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            8899999999999999999999999999984

>KOG1524|consensus

Probab=99.77  E-value=7.2e-18  Score=149.97  Aligned_cols=207  Identities=21%  Similarity=0.325  Sum_probs=152.9

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~  105 (318)
                      .-++.|+.||.+.|-+-.            +.+.+.+.+|.++|.+-+|++  +|.-|+|+|+||.|++|.-. +-.  .
T Consensus        76 d~~~i~s~DGkf~il~k~------------~rVE~sv~AH~~A~~~gRW~~--dGtgLlt~GEDG~iKiWSrs-GML--R  138 (737)
T KOG1524|consen   76 DTLLICSNDGRFVILNKS------------ARVERSISAHAAAISSGRWSP--DGAGLLTAGEDGVIKIWSRS-GML--R  138 (737)
T ss_pred             ceEEEEcCCceEEEeccc------------chhhhhhhhhhhhhhhcccCC--CCceeeeecCCceEEEEecc-chH--H
Confidence            457788999999988653            456678899999999999974  59999999999999999643 321  1


Q ss_pred             EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762         106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      .++.....+|+|++|.|+. +.++.|.  .+.|.|-.+...   ..+.+.++|.+-|.++.|+|.               
T Consensus       139 Stl~Q~~~~v~c~~W~p~S-~~vl~c~--g~h~~IKpL~~n---~k~i~WkAHDGiiL~~~W~~~---------------  197 (737)
T KOG1524|consen  139 STVVQNEESIRCARWAPNS-NSIVFCQ--GGHISIKPLAAN---SKIIRWRAHDGLVLSLSWSTQ---------------  197 (737)
T ss_pred             HHHhhcCceeEEEEECCCC-CceEEec--CCeEEEeecccc---cceeEEeccCcEEEEeecCcc---------------
Confidence            1222345789999999986 4444443  345666443222   345677899999999999985               


Q ss_pred             CccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee
Q psy2762         186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN  265 (318)
Q Consensus       186 ~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~  265 (318)
                        ...|++|++|-..+|||..+..   ..+-..|..+|++|+|+|+     ..++.+|. .++|+             ..
T Consensus       198 --s~lI~sgGED~kfKvWD~~G~~---Lf~S~~~ey~ITSva~npd-----~~~~v~S~-nt~R~-------------~~  253 (737)
T KOG1524|consen  198 --SNIIASGGEDFRFKIWDAQGAN---LFTSAAEEYAITSVAFNPE-----KDYLLWSY-NTARF-------------SS  253 (737)
T ss_pred             --ccceeecCCceeEEeecccCcc---cccCChhccceeeeeeccc-----cceeeeee-eeeee-------------cC
Confidence              4689999999999999987653   4555679999999999995     34444432 22331             11


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         266 TFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       266 ~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ...+.|..++|||||.+++.|...|.|-+
T Consensus       254 p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  254 PRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             CCccceEEEEEcCCCceeeccccCceEEE
Confidence            23467999999999999999998887644

>KOG1034|consensus

Probab=99.77  E-value=1.1e-17  Score=140.72  Aligned_cols=258  Identities=17%  Similarity=0.344  Sum_probs=183.6

Q ss_pred             eecCCCcceeeeeeecCC-----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcc-eEEEEec--ccccCeEEEEecCCC
Q psy2762           7 LVDTGHEDMIHDAEMDYL-----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKG-TLIAELK--GHSGPVWQVAWAHPQ   78 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~-----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~--~h~~~V~~v~~~~~~   78 (318)
                      .+..+|..+|..++|++-     -..+++.| ...+.+|.....         .+ ..+.++.  .|....+.++|+-+.
T Consensus        32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG-~~rvtiy~c~~d---------~~ir~lq~y~D~d~~Esfytcsw~yd~  101 (385)
T KOG1034|consen   32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVG-GNRVTIYECPGD---------GGIRLLQSYADEDHDESFYTCSWSYDS  101 (385)
T ss_pred             ehhccCCCccceeeeehhcCCCCCceEEEeC-CcEEEEEEECCc---------cceeeeeeccCCCCCcceEEEEEEecC
Confidence            456789999999999852     24566655 468999988632         11 2233332  366677888886432


Q ss_pred             C--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762          79 F--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        79 ~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                      .  .-+||.||.-|.|+|.|+.++++.  ..+.+|...|+.|.++|+. ..+++++|.|..|++|++..+.-..-...+.
T Consensus       102 ~~~~p~la~~G~~GvIrVid~~~~~~~--~~~~ghG~sINeik~~p~~-~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e  178 (385)
T KOG1034|consen  102 NTGNPFLAAGGYLGVIRVIDVVSGQCS--KNYRGHGGSINEIKFHPDR-PQLVLSASKDHSVRLWNIQTDVCVAVFGGVE  178 (385)
T ss_pred             CCCCeeEEeecceeEEEEEecchhhhc--cceeccCccchhhhcCCCC-CcEEEEecCCceEEEEeccCCeEEEEecccc
Confidence            2  458999999999999999887643  3466899999999999986 4688999999999999986654221122345


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-------------------------E
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-------------------------I  211 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-------------------------~  211 (318)
                      +|...|.++.|+++                 +.+|+++|.|..|++|++...+.                         .
T Consensus       179 gHrdeVLSvD~~~~-----------------gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~f  241 (385)
T KOG1034|consen  179 GHRDEVLSVDFSLD-----------------GDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHF  241 (385)
T ss_pred             cccCcEEEEEEcCC-----------------CCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccc
Confidence            89999999999997                 46899999999999999873210                         0


Q ss_pred             EEE-EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-----ee----EEeee--cC-CcEEEE--EE
Q psy2762         212 EET-KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-----TP----FIMNT--FD-DVVWNV--SW  276 (318)
Q Consensus       212 ~~~-~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-----~~----~~~~~--~~-~~v~~v--~~  276 (318)
                      +.. +-.-|..+|-|+.|-      |.+++|=|-++.|..|...+....     ++    ..+..  .+ -.||-+  +|
T Consensus       242 p~fst~diHrnyVDCvrw~------gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~  315 (385)
T KOG1034|consen  242 PDFSTTDIHRNYVDCVRWF------GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAF  315 (385)
T ss_pred             ccccccccccchHHHHHHH------hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEee
Confidence            010 223478888888884      678999999999999987432110     00    01111  11 235554  55


Q ss_pred             cCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         277 SLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       277 spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .|-+++||.|.+.|.|.+||++..
T Consensus       316 d~~~~~la~gnq~g~v~vwdL~~~  339 (385)
T KOG1034|consen  316 DPWQKMLALGNQSGKVYVWDLDNN  339 (385)
T ss_pred             cHHHHHHhhccCCCcEEEEECCCC
Confidence            677999999999999999998764

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.77  E-value=2.4e-15  Score=136.25  Aligned_cols=252  Identities=28%  Similarity=0.458  Sum_probs=184.1

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLA   84 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~la   84 (318)
                      ....+|...|..+.|+|++.++++++. |+.+++|++..           +..+..+.+|...|.++.|. | ++. .++
T Consensus       149 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~-~-~~~~~~~  215 (466)
T COG2319         149 RTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT-----------GKPLSTLAGHTDPVSSLAFS-P-DGGLLIA  215 (466)
T ss_pred             EEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC-----------CceEEeeccCCCceEEEEEc-C-CcceEEE
Confidence            345689999999999999999999986 99999999862           35678888899999999997 4 465 666


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +++.|+.|++||...+..... .+..|...+ ...|+|+  +.++++++.|+.+++|+......  .......|...+..
T Consensus       216 ~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~-~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~  289 (466)
T COG2319         216 SGSSDGTIRLWDLSTGKLLRS-TLSGHSDSV-VSSFSPD--GSLLASGSSDGTIRLWDLRSSSS--LLRTLSGHSSSVLS  289 (466)
T ss_pred             EecCCCcEEEEECCCCcEEee-ecCCCCcce-eEeECCC--CCEEEEecCCCcEEEeeecCCCc--EEEEEecCCccEEE
Confidence            669999999998775543331 456777764 3389998  46778999999999999865443  12222577888899


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-e
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-S  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s  243 (318)
                      +.|.|+                 +..+++++.|+.+++|+..............|...+..+.| +.   ++..++.+ .
T Consensus       290 ~~~~~~-----------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~  348 (466)
T COG2319         290 VAFSPD-----------------GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF-SP---DGSLLVSGGS  348 (466)
T ss_pred             EEECCC-----------------CCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE-CC---CCCEEEEeec
Confidence            999984                 24567799998999998876643222223478778999999 53   23445555 6


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEE-EeCCCeEEEEEECCCCc
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTV-SCGDNSVSLWKENTDGA  302 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s-~~~D~~v~iW~~~~~~~  302 (318)
                      .|+.+++|+.....  ..... .....+..+.+++ ...+.+ +..++.+++|+......
T Consensus       349 ~d~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  404 (466)
T COG2319         349 DDGTIRLWDLRTGK--PLKTL-EGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSL  404 (466)
T ss_pred             CCCcEEeeecCCCc--eeEEe-cCCceEEEEEECC-CCCEEEEecCCCceEEEecccCee
Confidence            88999999987654  11111 1222288999999 544444 67899999999877543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.77  E-value=4.2e-15  Score=133.21  Aligned_cols=263  Identities=12%  Similarity=0.145  Sum_probs=162.9

Q ss_pred             cceeeeeeecCCCCEEEEe-eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-CC
Q psy2762          13 EDMIHDAEMDYLGLYLATC-SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-DR   90 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~-s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-Dg   90 (318)
                      .+....++++|++++|+.+ ..++.|.+|+++..        ..-..+.... ..+....+.|++  ++++|+++++ ++
T Consensus        34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~--------g~l~~~~~~~-~~~~p~~i~~~~--~g~~l~v~~~~~~  102 (330)
T PRK11028         34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADD--------GALTFAAESP-LPGSPTHISTDH--QGRFLFSASYNAN  102 (330)
T ss_pred             CCCCccEEECCCCCEEEEEECCCCcEEEEEECCC--------CceEEeeeec-CCCCceEEEECC--CCCEEEEEEcCCC
Confidence            3567778999999988765 45889999998621        0112222222 233466788864  5888888775 88


Q ss_pred             eEEEEeCCCCc-EE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce---eeec-ccccccce
Q psy2762          91 KVIIWRGDNGN-WF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES---RKIA-AHTIGCNA  164 (318)
Q Consensus        91 ~v~vWd~~~~~-~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~---~~~~-~h~~~v~~  164 (318)
                      .|.+|++.... .. ....+. +.....+++++|+. ..++++...++.|.+|++.... ....   .... ........
T Consensus       103 ~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g-~~l~v~~~~~~~v~v~d~~~~g-~l~~~~~~~~~~~~g~~p~~  179 (330)
T PRK11028        103 CVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDN-RTLWVPCLKEDRIRLFTLSDDG-HLVAQEPAEVTTVEGAGPRH  179 (330)
T ss_pred             eEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCC-CEEEEeeCCCCEEEEEEECCCC-cccccCCCceecCCCCCCce
Confidence            99999986321 11 122222 23346778899984 3455677778999999985421 1110   0011 11223456


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecC-CCeEEEEEccC--CeEEEEEEccc------CCCCeeEEEEccCCCCC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQEG--DKWIEETKLEN------HSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~~--~~~~~~~~~~~------h~~~V~~v~~sp~~~~~  235 (318)
                      +.|+|+                 +++++++.+ +++|.+|+++.  ++......+..      +..+...+.|+|+    
T Consensus       180 ~~~~pd-----------------g~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pd----  238 (330)
T PRK11028        180 MVFHPN-----------------QQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPD----  238 (330)
T ss_pred             EEECCC-----------------CCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCC----
Confidence            888886                 456766655 89999999873  33322232221      1123446889996    


Q ss_pred             ccEEEEEe-CCCeEEEEEcCCCcc-eee-EEeeecCCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECC-CCceEEEeeec
Q psy2762         236 KCMIASCS-QDRKVIIWTSNDYVT-WTP-FIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENT-DGAWQCITEMG  310 (318)
Q Consensus       236 ~~~l~s~s-~D~~i~vw~~~~~~~-~~~-~~~~~~~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~-~~~~~~~~~~~  310 (318)
                      +++|+++. .++.|.+|++..... ... ..... ....+.+.|+|||++|+++++ +++|.+|+++. +|.+..+..+.
T Consensus       239 g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~  317 (330)
T PRK11028        239 GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYA  317 (330)
T ss_pred             CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccccc
Confidence            67777765 478999999854321 111 11111 124568899999999998886 89999999864 45666555544


Q ss_pred             c
Q psy2762         311 K  311 (318)
Q Consensus       311 ~  311 (318)
                      .
T Consensus       318 ~  318 (330)
T PRK11028        318 V  318 (330)
T ss_pred             c
Confidence            3

>KOG1539|consensus

Probab=99.77  E-value=3.9e-17  Score=151.84  Aligned_cols=197  Identities=18%  Similarity=0.281  Sum_probs=159.1

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe---cccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL---KGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~---~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ...+++++.+++|+..+.|...|+|-+||+.+           |....++   .+|.++|++++..  .-++.++|++.|
T Consensus       448 ~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS-----------Gi~r~sf~~~~ah~~~V~gla~D--~~n~~~vsa~~~  514 (910)
T KOG1539|consen  448 DINATAVCVSFCGNFVFIGYSKGTIDRFNMQS-----------GIHRKSFGDSPAHKGEVTGLAVD--GTNRLLVSAGAD  514 (910)
T ss_pred             CcceEEEEEeccCceEEEeccCCeEEEEEccc-----------CeeecccccCccccCceeEEEec--CCCceEEEccCc
Confidence            46899999999999999999999999999963           4555666   5899999999975  347889999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |.++.||......+....+   ...+.++..+-.  ..++|.+..|-.|+++|.....   -.+.+.+|...+++..|||
T Consensus       515 Gilkfw~f~~k~l~~~l~l---~~~~~~iv~hr~--s~l~a~~~ddf~I~vvD~~t~k---vvR~f~gh~nritd~~FS~  586 (910)
T KOG1539|consen  515 GILKFWDFKKKVLKKSLRL---GSSITGIVYHRV--SDLLAIALDDFSIRVVDVVTRK---VVREFWGHGNRITDMTFSP  586 (910)
T ss_pred             ceEEEEecCCcceeeeecc---CCCcceeeeeeh--hhhhhhhcCceeEEEEEchhhh---hhHHhhccccceeeeEeCC
Confidence            9999999987654333332   345666766655  4578888889999999874432   2456679999999999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-CeE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-RKV  248 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~i  248 (318)
                      +                 +++|++++.|++||+||+-++.++....   -..++..++|||+    |.+||++..| .-|
T Consensus       587 D-----------------grWlisasmD~tIr~wDlpt~~lID~~~---vd~~~~sls~SPn----gD~LAT~Hvd~~gI  642 (910)
T KOG1539|consen  587 D-----------------GRWLISASMDSTIRTWDLPTGTLIDGLL---VDSPCTSLSFSPN----GDFLATVHVDQNGI  642 (910)
T ss_pred             C-----------------CcEEEEeecCCcEEEEeccCcceeeeEe---cCCcceeeEECCC----CCEEEEEEecCceE
Confidence            8                 6899999999999999999887654443   3456889999996    8999999999 669


Q ss_pred             EEEEcC
Q psy2762         249 IIWTSN  254 (318)
Q Consensus       249 ~vw~~~  254 (318)
                      .+|.-.
T Consensus       643 ylWsNk  648 (910)
T KOG1539|consen  643 YLWSNK  648 (910)
T ss_pred             EEEEch
Confidence            999643

>KOG1538|consensus

Probab=99.72  E-value=1.4e-15  Score=138.74  Aligned_cols=215  Identities=20%  Similarity=0.286  Sum_probs=142.6

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCc---------------------c--e-EEEEecc
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQK---------------------G--T-LIAELKG   64 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~---------------------~--~-~~~~~~~   64 (318)
                      +.||++.|++++++.||+++|||+.|+.|.||+.........+..+.                     +  . .-+....
T Consensus        49 LKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K  128 (1081)
T KOG1538|consen   49 LKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSK  128 (1081)
T ss_pred             cccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHh
Confidence            36999999999999999999999999999999854110000000000                     0  0 0011111


Q ss_pred             c--ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC---CCcEEEEeecCCeEE
Q psy2762          65 H--SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE---FGLILACGSSDGTIS  139 (318)
Q Consensus        65 h--~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~---~~~~lasgs~d~~i~  139 (318)
                      |  ...|.+++|.  .||++|+-|=.+|||.+-+........+..--+.+++|.+|+|+|..   ....++......++.
T Consensus       129 ~kss~R~~~CsWt--nDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLS  206 (1081)
T KOG1538|consen  129 HKSSSRIICCSWT--NDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLS  206 (1081)
T ss_pred             hhhheeEEEeeec--CCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeE
Confidence            2  2446677776  36999999999999999975544333332223467899999999963   124566666666666


Q ss_pred             EEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         140 FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       140 i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      ++.+. +..   +.+.+.-.....++++.|+                 |.|+..|+.|+.+++|..++   +...++...
T Consensus       207 Fy~Ls-G~~---Igk~r~L~FdP~CisYf~N-----------------GEy~LiGGsdk~L~~fTR~G---vrLGTvg~~  262 (1081)
T KOG1538|consen  207 FYQLS-GKQ---IGKDRALNFDPCCISYFTN-----------------GEYILLGGSDKQLSLFTRDG---VRLGTVGEQ  262 (1081)
T ss_pred             EEEec-cee---ecccccCCCCchhheeccC-----------------CcEEEEccCCCceEEEeecC---eEEeecccc
Confidence            66541 210   1111111122234455554                 67999999999999997554   455666667


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                      ..||..|...|+    ++.++.|+.||+|--|++
T Consensus       263 D~WIWtV~~~PN----sQ~v~~GCqDGTiACyNl  292 (1081)
T KOG1538|consen  263 DSWIWTVQAKPN----SQYVVVGCQDGTIACYNL  292 (1081)
T ss_pred             ceeEEEEEEccC----CceEEEEEccCeeehhhh
Confidence            789999999996    889999999999998874

>KOG2919|consensus

Probab=99.72  E-value=4e-16  Score=131.26  Aligned_cols=229  Identities=20%  Similarity=0.269  Sum_probs=162.5

Q ss_pred             cCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--ccccCeE---EEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--GHSGPVW---QVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        22 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~---~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      .|+..++++.+.|.-|++||.-           +|++-.+++  .|.++++   ++.|++  ||..|+. ++.+.|+++|
T Consensus       120 qP~t~l~a~ssr~~PIh~wdaf-----------tG~lraSy~~ydh~de~taAhsL~Fs~--DGeqlfa-GykrcirvFd  185 (406)
T KOG2919|consen  120 QPSTNLFAVSSRDQPIHLWDAF-----------TGKLRASYRAYDHQDEYTAAHSLQFSP--DGEQLFA-GYKRCIRVFD  185 (406)
T ss_pred             CCccceeeeccccCceeeeecc-----------ccccccchhhhhhHHhhhhheeEEecC--CCCeEee-cccceEEEee
Confidence            4778999999999999999985           344444444  3555544   689975  5888754 6889999999


Q ss_pred             C-CCCcEEEEEEec-----CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          97 G-DNGNWFKYYEYN-----NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        97 ~-~~~~~~~~~~~~-----~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      + +.++.-..+...     +..+.+.|++|+|.+ ...+|.|+....+-|+.-...   ..+..+.+|..+|+-+.|+++
T Consensus       186 t~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~-~~~~a~gsY~q~~giy~~~~~---~pl~llggh~gGvThL~~~ed  261 (406)
T KOG2919|consen  186 TSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMD-SKTLAVGSYGQRVGIYNDDGR---RPLQLLGGHGGGVTHLQWCED  261 (406)
T ss_pred             ccCCCCCCcchhhhhcccccccceeeeeeccCCC-CcceeeecccceeeeEecCCC---CceeeecccCCCeeeEEeccC
Confidence            8 444322222222     236789999999985 457899999888888753221   234455699999999999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecC-CCeEEEEEccCCeEEEEEEcccCCCC-eeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLENHSDW-VRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~~~~~~~~~~~~~h~~~-V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                                       ++.|.+|+. |-.|-.||++... .+.-.+..|... =-.|-|.-+  ..+..|++|+.||.|
T Consensus       262 -----------------Gn~lfsGaRk~dkIl~WDiR~~~-~pv~~L~rhv~~TNQRI~FDld--~~~~~LasG~tdG~V  321 (406)
T KOG2919|consen  262 -----------------GNKLFSGARKDDKILCWDIRYSR-DPVYALERHVGDTNQRILFDLD--PKGEILASGDTDGSV  321 (406)
T ss_pred             -----------------cCeecccccCCCeEEEEeehhcc-chhhhhhhhccCccceEEEecC--CCCceeeccCCCccE
Confidence                             355666654 6689999987643 234456666552 223445433  248899999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      ++||+++...+ +.....+..-|+.|+++|-=+++|+++..
T Consensus       322 ~vwdlk~~gn~-~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  322 RVWDLKDLGNE-VSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             EEEecCCCCCc-ccccccccccccceecCcccceeeeccCc
Confidence            99999885533 23445567889999999998888877754

>KOG1310|consensus

Probab=99.71  E-value=2.5e-16  Score=140.59  Aligned_cols=243  Identities=19%  Similarity=0.198  Sum_probs=157.5

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      ...+.||++-|+++.|+.+|.+|+|||.|-.+.|||.-.           .+++..+ .||.+.|+++.|.|-....+++
T Consensus        43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~-----------~KllhsI~TgHtaNIFsvKFvP~tnnriv~  111 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFE-----------YKLLHSISTGHTANIFSVKFVPYTNNRIVL  111 (758)
T ss_pred             hhhhccccceecceeecCCCCEEeecCCcceEEeecchh-----------cceeeeeecccccceeEEeeeccCCCeEEE
Confidence            346789999999999999999999999999999999852           3555554 5999999999998666678999


Q ss_pred             EEECCCeEEEEeCCCCc--------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762          85 SCSYDRKVIIWRGDNGN--------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                      ||+.|+.|+|+|+...+        ...+.-+.-|...|..|+-.|..+ ..+-+++.||+|+-+|++....-  .....
T Consensus       112 sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~P-htfwsasEDGtirQyDiREph~c--~p~~~  188 (758)
T KOG1310|consen  112 SGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGP-HTFWSASEDGTIRQYDIREPHVC--NPDED  188 (758)
T ss_pred             eccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCC-ceEEEecCCcceeeecccCCccC--Ccccc
Confidence            99999999999987411        112222335788899999999853 57888999999999998654310  00000


Q ss_pred             ccc---------cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC----CCe
Q psy2762         157 AHT---------IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS----DWV  223 (318)
Q Consensus       157 ~h~---------~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~----~~V  223 (318)
                      .|.         ....++..+|..                -.+||.|+.|--.|+||.+...+ ....--.|+    ...
T Consensus       189 ~~~~l~ny~~~lielk~ltisp~r----------------p~~laVGgsdpfarLYD~Rr~lk-s~~s~~~~~~~pp~~~  251 (758)
T KOG1310|consen  189 CPSILVNYNPQLIELKCLTISPSR----------------PYYLAVGGSDPFARLYDRRRVLK-SFRSDGTMNTCPPKDC  251 (758)
T ss_pred             ccHHHHHhchhhheeeeeeecCCC----------------CceEEecCCCchhhhhhhhhhcc-CCCCCccccCCCCccc
Confidence            010         112234444421                36899999999999999542110 000000011    111


Q ss_pred             eEE-EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         224 RDV-AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       224 ~~v-~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .|| -|+|.      .|  ...++.+..+                -.-...|+|+|+|..|+..=..-.|.+++++.+..
T Consensus       252 ~cv~yf~p~------hl--kn~~gn~~~~----------------~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  252 RCVRYFSPG------HL--KNSQGNLDRY----------------ITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             chhheecCc------cc--cCcccccccc----------------eeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCC
Confidence            222 23331      11  1222221111                11245789999998876554455899999888654


Q ss_pred             e
Q psy2762         303 W  303 (318)
Q Consensus       303 ~  303 (318)
                      .
T Consensus       308 ~  308 (758)
T KOG1310|consen  308 P  308 (758)
T ss_pred             c
Confidence            3

>KOG1009|consensus

Probab=99.71  E-value=1.4e-16  Score=137.46  Aligned_cols=196  Identities=23%  Similarity=0.445  Sum_probs=147.6

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC-------cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-------NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~-------~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      ..+|.++.|- ....+.||||+.|..|++|.+..+       ...-...+..|...|++|.|+|+  +.++|+|+.+|.|
T Consensus        13 ~~pv~s~dfq-~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~--gelLASg~D~g~v   89 (434)
T KOG1009|consen   13 HEPVYSVDFQ-KNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPD--GELLASGGDGGEV   89 (434)
T ss_pred             CCceEEEEec-cCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCC--cCeeeecCCCceE
Confidence            3578889884 334459999999999999976432       12233456789999999999998  7899999999999


Q ss_pred             EEEEeec------C------CCCcceee-ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762         139 SFLTYMS------D------TNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ  205 (318)
Q Consensus       139 ~i~~~~~------~------~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~  205 (318)
                      .+|....      +      +..|..++ +.+|...+..++|+|+                 +.++++++.|+.+++||+
T Consensus        90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d-----------------~~~l~s~s~dns~~l~Dv  152 (434)
T KOG1009|consen   90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPD-----------------SNFLVSGSVDNSVRLWDV  152 (434)
T ss_pred             EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCC-----------------CceeeeeeccceEEEEEe
Confidence            9997541      1      12244333 3489999999999997                 578999999999999999


Q ss_pred             cCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce------------------eeEEe---
Q psy2762         206 EGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW------------------TPFIM---  264 (318)
Q Consensus       206 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~------------------~~~~~---  264 (318)
                      ..+..  ...+.+|...|..++|.|.    ++++++-|.|+..+.+.+......                  ....+   
T Consensus       153 ~~G~l--~~~~~dh~~yvqgvawDpl----~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhD  226 (434)
T KOG1009|consen  153 HAGQL--LAILDDHEHYVQGVAWDPL----NQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHD  226 (434)
T ss_pred             cccee--Eeeccccccccceeecchh----hhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeec
Confidence            98864  4567899999999999996    889999999998777765432100                  00001   


Q ss_pred             eecCCcEEEEEEcCCCCEEEEEe
Q psy2762         265 NTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       265 ~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      .+.......++|+|||.+|++.+
T Consensus       227 eTlksFFrRlsfTPdG~llvtPa  249 (434)
T KOG1009|consen  227 ETLKSFFRRLSFTPDGSLLVTPA  249 (434)
T ss_pred             CchhhhhhhcccCCCCcEEEccc
Confidence            01224577889999999998764

>KOG1963|consensus

Probab=99.70  E-value=5.4e-15  Score=138.63  Aligned_cols=249  Identities=21%  Similarity=0.311  Sum_probs=169.2

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC-cEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG-TLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~-~~las~s~   88 (318)
                      .|-...-....|++|+++++.+. +..|+||...           ++.++..+.+|..++..+.+.+.... .++.+++.
T Consensus        13 gg~n~~~~~avfSnD~k~l~~~~-~~~V~VyS~~-----------Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl   80 (792)
T KOG1963|consen   13 GGRNGNKSPAVFSNDAKFLFLCT-GNFVKVYSTA-----------TGECITSLEDHTAPLTSVIVLPSSENANYLIVCSL   80 (792)
T ss_pred             ccccceecccccccCCcEEEEee-CCEEEEEecc-----------hHhhhhhcccccCccceeeecCCCccceEEEEEec
Confidence            34444555567999999998766 6699999886           46778899999999999998643322 57889999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcC-e----------------------------------------------------
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSS-V----------------------------------------------------  115 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~-v----------------------------------------------------  115 (318)
                      ||+|++||...+....++....+... +                                                    
T Consensus        81 ~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~  160 (792)
T KOG1963|consen   81 DGTIRVWDWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEH  160 (792)
T ss_pred             CccEEEecCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhh
Confidence            99999999876654444332211100 0                                                    


Q ss_pred             ---EEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeeeCCCCCCCccccccCCCCCCccceE
Q psy2762         116 ---NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL  191 (318)
Q Consensus       116 ---~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  191 (318)
                         .+|.+++.  +.+..... +..+.+|......+....... ..|+.++.++++||.                 +.++
T Consensus       161 ~~~~~I~~~~~--ge~~~i~~-~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn-----------------~~~~  220 (792)
T KOG1963|consen  161 QEPKSIVDNNS--GEFKGIVH-MCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPN-----------------ERYL  220 (792)
T ss_pred             cCCccEEEcCC--ceEEEEEE-eeeEEEEEecccceeeccchhhhhhcccceeEEeccc-----------------cceE
Confidence               01111111  11111111 111222322111100001111 146666677777776                 5799


Q ss_pred             EEecCCCeEEEEE-cc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCC
Q psy2762         192 VSGGCDNLIKIWK-QE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD  269 (318)
Q Consensus       192 asgs~d~~i~iwd-~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~  269 (318)
                      |+|-.||.|.+|. .. .+.-.....+.-|...|++++|+++    |.+|.|||..+.+-+|..++..   ...++...+
T Consensus       221 Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~----G~~LlSGG~E~VLv~Wq~~T~~---kqfLPRLgs  293 (792)
T KOG1963|consen  221 AAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSD----GAYLLSGGREGVLVLWQLETGK---KQFLPRLGS  293 (792)
T ss_pred             EEeccCCcEEEEeccccccccccceEEEecccccceeEEecC----CceEeecccceEEEEEeecCCC---cccccccCC
Confidence            9999999999996 33 1222334556789999999999996    8899999999999999998865   355777889


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         270 VVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +|..+.+|||+.+.+...+|+.+.+-..
T Consensus       294 ~I~~i~vS~ds~~~sl~~~DNqI~li~~  321 (792)
T KOG1963|consen  294 PILHIVVSPDSDLYSLVLEDNQIHLIKA  321 (792)
T ss_pred             eeEEEEEcCCCCeEEEEecCceEEEEec
Confidence            9999999999999999999999998875

>KOG2110|consensus

Probab=99.70  E-value=3.4e-14  Score=121.62  Aligned_cols=238  Identities=13%  Similarity=0.147  Sum_probs=159.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-   90 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-   90 (318)
                      -...+..+.|+.+...|..|+.||. ++|+.+.-          ++.. ......-.|-..-|+    ..++|-.+.+. 
T Consensus         4 ~~~ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~----------~k~~-~~~~~~~~IvEmLFS----SSLvaiV~~~qp   67 (391)
T KOG2110|consen    4 KKPTINFIGFNQDSTLLSVGSKDGY-KIFSCSPF----------EKCF-SKDTEGVSIVEMLFS----SSLVAIVSIKQP   67 (391)
T ss_pred             CCcceeeeeeccceeEEEccCCCce-eEEecCch----------HHhh-cccCCCeEEEEeecc----cceeEEEecCCC
Confidence            3556777789999999999999985 78877621          1110 111112224445564    35666666554 


Q ss_pred             -eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---ccccccceee
Q psy2762          91 -KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AHTIGCNAVS  166 (318)
Q Consensus        91 -~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h~~~v~~~~  166 (318)
                       .+++.++.....++...+   +.+|.+|.++-+    +++.+-.+ .|.|+|+...+   .+..+.   .+..++..++
T Consensus        68 r~Lkv~~~Kk~~~ICe~~f---pt~IL~VrmNr~----RLvV~Lee-~IyIydI~~Mk---lLhTI~t~~~n~~gl~AlS  136 (391)
T KOG2110|consen   68 RKLKVVHFKKKTTICEIFF---PTSILAVRMNRK----RLVVCLEE-SIYIYDIKDMK---LLHTIETTPPNPKGLCALS  136 (391)
T ss_pred             ceEEEEEcccCceEEEEec---CCceEEEEEccc----eEEEEEcc-cEEEEecccce---eehhhhccCCCccceEeec
Confidence             588998887766676554   577999999975    34454544 48999985432   122222   3444454444


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEe--cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSG--GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasg--s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +++.                 ..|+|--  ...|-|.|||..+-+  +...+..|.+.+-+++|+|+    |.+|||+|+
T Consensus       137 ~n~~-----------------n~ylAyp~s~t~GdV~l~d~~nl~--~v~~I~aH~~~lAalafs~~----G~llATASe  193 (391)
T KOG2110|consen  137 PNNA-----------------NCYLAYPGSTTSGDVVLFDTINLQ--PVNTINAHKGPLAALAFSPD----GTLLATASE  193 (391)
T ss_pred             cCCC-----------------CceEEecCCCCCceEEEEEcccce--eeeEEEecCCceeEEEECCC----CCEEEEecc
Confidence            4432                 2345432  235679999987654  45567799999999999996    899999999


Q ss_pred             CCe-EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         245 DRK-VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       245 D~~-i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|+ |||+.+.++........-.....|.+++|+||+++|+++|.-+||.|++++.
T Consensus       194 KGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  194 KGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             CceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            888 7899987754221111112234699999999999999999999999999866

>KOG0771|consensus

Probab=99.69  E-value=8e-16  Score=133.51  Aligned_cols=203  Identities=20%  Similarity=0.207  Sum_probs=145.3

Q ss_pred             eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      ..++|+.+|..|++++.||++|||+..+.           ..+.....|.+.|.++.|++  ||++|+|-+.| ..+||+
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~-----------~t~l~e~~~~~eV~DL~FS~--dgk~lasig~d-~~~VW~  213 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSM-----------LTILEEIAHHAEVKDLDFSP--DGKFLASIGAD-SARVWS  213 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcc-----------hhhhhhHhhcCccccceeCC--CCcEEEEecCC-ceEEEE
Confidence            67899999999999999999999997532           34566778999999999984  69999999999 999999


Q ss_pred             CCCCcEEEEEEecCCCcCeEEEEeeCCCC--CcEEEEe-ecCCeEEEEEeecCCCC--cceeeecccccccceeeeCCCC
Q psy2762          97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEF--GLILACG-SSDGTISFLTYMSDTNS--WESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~~lasg-s~d~~i~i~~~~~~~~~--~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      .+++......+=...+.....+.|+.++.  ..++++. ..-+.|+.|+...-...  ....+...-...+++++.+++ 
T Consensus       214 ~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~d-  292 (398)
T KOG0771|consen  214 VNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDD-  292 (398)
T ss_pred             eccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCC-
Confidence            98874333221112344566777876631  2233333 33456777665322211  011111122235777777776 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      ++++|.|+.||.|-|++..+.+..+ ..-+.|...|+.|.|+|+    .+++++.|.|..++|-
T Consensus       293 ----------------Gkf~AlGT~dGsVai~~~~~lq~~~-~vk~aH~~~VT~ltF~Pd----sr~~~svSs~~~~~v~  351 (398)
T KOG0771|consen  293 ----------------GKFLALGTMDGSVAIYDAKSLQRLQ-YVKEAHLGFVTGLTFSPD----SRYLASVSSDNEAAVT  351 (398)
T ss_pred             ----------------CcEEEEeccCCcEEEEEeceeeeeE-eehhhheeeeeeEEEcCC----cCcccccccCCceeEE
Confidence                            6899999999999999987765443 334789999999999996    7789999999999988


Q ss_pred             EcCC
Q psy2762         252 TSND  255 (318)
Q Consensus       252 ~~~~  255 (318)
                      .+.-
T Consensus       352 ~l~v  355 (398)
T KOG0771|consen  352 KLAV  355 (398)
T ss_pred             EEee
Confidence            7654

>KOG1517|consensus

Probab=99.69  E-value=2.9e-15  Score=142.65  Aligned_cols=255  Identities=17%  Similarity=0.143  Sum_probs=168.7

Q ss_pred             cceeeeeee-c-CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc---c----ccCeEEEEecCCCCCcEE
Q psy2762          13 EDMIHDAEM-D-YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG---H----SGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        13 ~~~v~~~~~-~-~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---h----~~~V~~v~~~~~~~~~~l   83 (318)
                      ...|+.+.+ + -|-.++++|+.||.||||+--..      ..++.+++..+.+   +    .+.-.-+.|. . ...+|
T Consensus      1109 ~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~------~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWq-Q-~~G~L 1180 (1387)
T KOG1517|consen 1109 DTRVSDLELINEQDDALLLTASSDGVIRIWKDYAD------KWKKPELVTAWSSLSDQLPGARGTGLVVDWQ-Q-QSGHL 1180 (1387)
T ss_pred             CCccceeeeecccchhheeeeccCceEEEeccccc------ccCCceeEEeeccccccCccCCCCCeeeehh-h-hCCeE
Confidence            457888886 3 35678999999999999974211      0012334433322   2    1222346774 2 34455


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc-
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG-  161 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~-  161 (318)
                      .++|.-+.|+|||........  .+. +....|++++-+..+ +.++++|-.||.|++||.+.......+...+.|... 
T Consensus      1181 l~tGd~r~IRIWDa~~E~~~~--diP~~s~t~vTaLS~~~~~-gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~ 1257 (1387)
T KOG1517|consen 1181 LVTGDVRSIRIWDAHKEQVVA--DIPYGSSTLVTALSADLVH-GNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVE 1257 (1387)
T ss_pred             EecCCeeEEEEEecccceeEe--ecccCCCccceeecccccC-CceEEEeecCCceEEeecccCCccccceeecccCCcc
Confidence            555668999999988654322  232 344567777665554 678999999999999998765543344455567655 


Q ss_pred             -cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC--C-CeeEEEEccCCCCCcc
Q psy2762         162 -CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS--D-WVRDVAWAPSWGLSKC  237 (318)
Q Consensus       162 -v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~--~-~V~~v~~sp~~~~~~~  237 (318)
                       |.-+.+-+.+                ...|++|+.||.|++||++........+...|.  + .++++.-+++    ..
T Consensus      1258 ~Iv~~slq~~G----------------~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~h----ap 1317 (1387)
T KOG1517|consen 1258 PIVHLSLQRQG----------------LGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEH----AP 1317 (1387)
T ss_pred             cceeEEeecCC----------------CcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccC----CC
Confidence             7777776632                125999999999999998864322222333343  2 3788888885    67


Q ss_pred             EEEEEeCCCeEEEEEcCCCcceeeEEeeec----CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         238 MIASCSQDRKVIIWTSNDYVTWTPFIMNTF----DDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~----~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .+|+|+. +.|+||++.+........-.++    ...+.+++|+|..-+||+|+.|.+|.||.-..
T Consensus      1318 iiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1318 IIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred             eeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence            8999998 9999999877542111111111    24578999999999999999999999997443

>KOG1445|consensus

Probab=99.68  E-value=2e-15  Score=136.97  Aligned_cols=237  Identities=15%  Similarity=0.264  Sum_probs=161.1

Q ss_pred             eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE-----EEE
Q psy2762          31 CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-----FKY  105 (318)
Q Consensus        31 ~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~-----~~~  105 (318)
                      .|..|.|.||+++.+.+.++     + .+-.+. ....|+.++|. |.|...||.++.||.|++|.+..+..     .+.
T Consensus       599 ~g~gG~iai~el~~PGrLPD-----g-v~p~l~-Ngt~vtDl~Wd-PFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe  670 (1012)
T KOG1445|consen  599 AGSGGVIAIYELNEPGRLPD-----G-VMPGLF-NGTLVTDLHWD-PFDDERLAVATDDGQINLWRLTANGLPENEMTPE  670 (1012)
T ss_pred             cCCCceEEEEEcCCCCCCCc-----c-cccccc-cCceeeecccC-CCChHHeeecccCceEEEEEeccCCCCcccCCcc
Confidence            45678999999985422211     1 122222 34569999996 57899999999999999998754321     123


Q ss_pred             EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762         106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      ..+..|...|+++.|+|-. ..+|++++.|-+|++||+...+   ....+.+|+..|..++|||+               
T Consensus       671 ~~lt~h~eKI~slRfHPLA-advLa~asyd~Ti~lWDl~~~~---~~~~l~gHtdqIf~~AWSpd---------------  731 (1012)
T KOG1445|consen  671 KILTIHGEKITSLRFHPLA-ADVLAVASYDSTIELWDLANAK---LYSRLVGHTDQIFGIAWSPD---------------  731 (1012)
T ss_pred             eeeecccceEEEEEecchh-hhHhhhhhccceeeeeehhhhh---hhheeccCcCceeEEEECCC---------------
Confidence            3466899999999999975 4678999999999999986554   23456799999999999998               


Q ss_pred             CccceEEEecCCCeEEEEEccCCeEEEEEEcccCC-CCeeEEEEccCCCCCccEEEEEeCC----CeEEEEEcCCCccee
Q psy2762         186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS-DWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWTSNDYVTWT  260 (318)
Q Consensus       186 ~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~-~~V~~v~~sp~~~~~~~~l~s~s~D----~~i~vw~~~~~~~~~  260 (318)
                        |+.+|+...||+||+|+...++. +..+-.+.. ..--.|.|.-+    |.+++..|.|    +.|.+|+.+......
T Consensus       732 --Gr~~AtVcKDg~~rVy~Prs~e~-pv~Eg~gpvgtRgARi~wacd----gr~viv~Gfdk~SeRQv~~Y~Aq~l~~~p  804 (1012)
T KOG1445|consen  732 --GRRIATVCKDGTLRVYEPRSREQ-PVYEGKGPVGTRGARILWACD----GRIVIVVGFDKSSERQVQMYDAQTLDLRP  804 (1012)
T ss_pred             --CcceeeeecCceEEEeCCCCCCC-ccccCCCCccCcceeEEEEec----CcEEEEecccccchhhhhhhhhhhccCCc
Confidence              57899999999999999876642 222211211 11235677775    7788887776    458899877633111


Q ss_pred             eE--EeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCCc
Q psy2762         261 PF--IMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       261 ~~--~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ..  .+..-.+ +.-=.|.+|. .++++|-.|..|.+|.+-.+..
T Consensus       805 l~t~~lDvaps-~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esP  848 (1012)
T KOG1445|consen  805 LYTQVLDVAPS-PLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESP  848 (1012)
T ss_pred             ceeeeecccCc-cccccccCCCceEEEecCCCceEEEEEecCCCc
Confidence            11  0100001 1112355564 4566777899999999876654

>KOG1587|consensus

Probab=99.68  E-value=8.6e-15  Score=136.36  Aligned_cols=233  Identities=20%  Similarity=0.254  Sum_probs=157.6

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE---E-EEEec
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF---K-YYEYN  109 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~---~-~~~~~  109 (318)
                      ++.+.||++..+          ...-..+. -...|+++.|. |.++.+||.|.++|.|.+||...+...   . .....
T Consensus       221 ~~~~~vW~~~~p----------~~Pe~~~~-~~s~v~~~~f~-p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~  288 (555)
T KOG1587|consen  221 DGVLLVWSLKNP----------NTPELVLE-SPSEVTCLKFC-PFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEV  288 (555)
T ss_pred             CceEEEEecCCC----------CCceEEEe-cCCceeEEEec-cCCcceEEeeccCceEEEEEccCCCCCCCcccccccc
Confidence            357899998632          22333333 36789999995 578999999999999999998765431   1 11223


Q ss_pred             CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cc-------ccccceeeeCCCCCCCcccccc
Q psy2762         110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AH-------TIGCNAVSWGPGIGSLSELDLK  180 (318)
Q Consensus       110 ~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h-------~~~v~~~~~~p~~~~~~~~~~~  180 (318)
                      .|..+|..+.|..+..+.-+++++.||.|..|+.+......+...+.  .|       ...+..++|.|..         
T Consensus       289 sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~---------  359 (555)
T KOG1587|consen  289 SHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTD---------  359 (555)
T ss_pred             cCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCC---------
Confidence            58899999999987666668899999999999875433211111111  11       1234566676642         


Q ss_pred             CCCCCCccceEEEecCCCeEEEEEccCCeEEE------EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE------ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       181 ~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~------~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                             -..|+.|++.|.|.--+..+.+...      ...+..|..+|+.+.++|=   ....+.|++ |-+++||.-.
T Consensus       360 -------p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF---~~k~fls~g-DW~vriWs~~  428 (555)
T KOG1587|consen  360 -------PNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPF---YPKNFLSVG-DWTVRIWSED  428 (555)
T ss_pred             -------CceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCC---ccceeeeec-cceeEecccc
Confidence                   2568999999998874433322212      3356678899999999993   345666666 9999999765


Q ss_pred             CCcceeeEEeeecCCcEEEEEEcCCCCE-EEEEeCCCeEEEEEECC
Q psy2762         255 DYVTWTPFIMNTFDDVVWNVSWSLTGDI-LTVSCGDNSVSLWKENT  299 (318)
Q Consensus       255 ~~~~~~~~~~~~~~~~v~~v~~spdg~~-l~s~~~D~~v~iW~~~~  299 (318)
                      ... ..........+.|.+++|||.... ++++..||.+.|||+..
T Consensus       429 ~~~-~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~  473 (555)
T KOG1587|consen  429 VIA-SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQ  473 (555)
T ss_pred             CCC-CcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhc
Confidence            221 112222344567999999998755 55666799999999754

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.67  E-value=5.6e-13  Score=119.49  Aligned_cols=246  Identities=14%  Similarity=0.169  Sum_probs=148.6

Q ss_pred             EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-CCCeEEEEeCCC-CcEEEEE
Q psy2762          29 ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-YDRKVIIWRGDN-GNWFKYY  106 (318)
Q Consensus        29 ~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-~Dg~v~vWd~~~-~~~~~~~  106 (318)
                      ++...|+.|.+|++...        ..-..+.++. +.+....+.+++  ++++|+.++ .++.|.+|++.. +......
T Consensus         6 ~~~~~~~~I~~~~~~~~--------g~l~~~~~~~-~~~~~~~l~~sp--d~~~lyv~~~~~~~i~~~~~~~~g~l~~~~   74 (330)
T PRK11028          6 IASPESQQIHVWNLNHE--------GALTLLQVVD-VPGQVQPMVISP--DKRHLYVGVRPEFRVLSYRIADDGALTFAA   74 (330)
T ss_pred             EEcCCCCCEEEEEECCC--------CceeeeeEEe-cCCCCccEEECC--CCCEEEEEECCCCcEEEEEECCCCceEEee
Confidence            44577999999999521        1123455554 345566788864  478776654 478999999863 3332222


Q ss_pred             EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCC
Q psy2762         107 EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGG  186 (318)
Q Consensus       107 ~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~  186 (318)
                      ... .......++|+|+. ..++++.-.++.|.+|++..+...........+...+..++++|+                
T Consensus        75 ~~~-~~~~p~~i~~~~~g-~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~----------------  136 (330)
T PRK11028         75 ESP-LPGSPTHISTDHQG-RFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPD----------------  136 (330)
T ss_pred             eec-CCCCceEEEECCCC-CEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCC----------------
Confidence            222 23456789999984 234444445889999998532211111111122234566778886                


Q ss_pred             ccceE-EEecCCCeEEEEEccCC-eEEE----EEEcccCCCCeeEEEEccCCCCCccEEEEEeC-CCeEEEEEcCCCc-c
Q psy2762         187 VAKRL-VSGGCDNLIKIWKQEGD-KWIE----ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYV-T  258 (318)
Q Consensus       187 ~~~~l-asgs~d~~i~iwd~~~~-~~~~----~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~~i~vw~~~~~~-~  258 (318)
                       ++++ ++...++.|++||+.+. .+..    ...... ....+.+.|+|+    +++|+++.. +++|.+|++.... .
T Consensus       137 -g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-g~~p~~~~~~pd----g~~lyv~~~~~~~v~v~~~~~~~~~  210 (330)
T PRK11028        137 -NRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-GAGPRHMVFHPN----QQYAYCVNELNSSVDVWQLKDPHGE  210 (330)
T ss_pred             -CCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-CCCCceEEECCC----CCEEEEEecCCCEEEEEEEeCCCCC
Confidence             3444 66677799999998753 2211    011111 233578999996    777777766 9999999986421 1


Q ss_pred             ee-eEEeeec------CCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCC-ceEEEeee
Q psy2762         259 WT-PFIMNTF------DDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDG-AWQCITEM  309 (318)
Q Consensus       259 ~~-~~~~~~~------~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~-~~~~~~~~  309 (318)
                      .. ...+..+      ......+.|+|||++|+++.+ +++|.+|+++..+ .+..+...
T Consensus       211 ~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~  270 (330)
T PRK11028        211 IECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQ  270 (330)
T ss_pred             EEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEE
Confidence            11 1111111      123346899999999998864 7899999997754 44444443

>KOG1273|consensus

Probab=99.67  E-value=1e-14  Score=122.42  Aligned_cols=259  Identities=15%  Similarity=0.246  Sum_probs=164.3

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.+++|..+|.+++||+||+.|+|+|.|..|++||+..           |.++..++ ...+|+.+.| +|.+-+.++.
T Consensus        58 ar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~-----------gs~l~rir-f~spv~~~q~-hp~k~n~~va  124 (405)
T KOG1273|consen   58 ARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLK-----------GSPLKRIR-FDSPVWGAQW-HPRKRNKCVA  124 (405)
T ss_pred             hhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccC-----------CCceeEEE-ccCccceeee-ccccCCeEEE
Confidence            456789999999999999999999999999999999973           44565555 5789999999 4544444444


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEec--CC-CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccc
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYN--NH-DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIG  161 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~--~h-~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~  161 (318)
                      .-.+..-.+-++..+..... ...  +. .....+..|.+.  +.++.+|..-|.+-+++...-.-   ....+. -...
T Consensus       125 ~~~~~sp~vi~~s~~~h~~L-p~d~d~dln~sas~~~fdr~--g~yIitGtsKGkllv~~a~t~e~---vas~rits~~~  198 (405)
T KOG1273|consen  125 TIMEESPVVIDFSDPKHSVL-PKDDDGDLNSSASHGVFDRR--GKYIITGTSKGKLLVYDAETLEC---VASFRITSVQA  198 (405)
T ss_pred             EEecCCcEEEEecCCceeec-cCCCccccccccccccccCC--CCEEEEecCcceEEEEecchhee---eeeeeechhee
Confidence            44444344444443221111 001  00 111223345655  88999999999999988643210   111111 1133


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-------CeEEEEEEccc--CCCCeeEEEEccCC
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-------DKWIEETKLEN--HSDWVRDVAWAPSW  232 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-------~~~~~~~~~~~--h~~~V~~v~~sp~~  232 (318)
                      +..+.++-.                 +..|+.-..|++||.|+.+.       ++..+.+++..  .+-.=++++||.+ 
T Consensus       199 IK~I~~s~~-----------------g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~d-  260 (405)
T KOG1273|consen  199 IKQIIVSRK-----------------GRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGD-  260 (405)
T ss_pred             eeEEEEecc-----------------CcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCC-
Confidence            444444432                 56899999999999998652       12211222211  1112257889886 


Q ss_pred             CCCccEEEEEe-CCCeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         233 GLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       233 ~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                         |.|+..++ ....+.||....+.  ....+.+.. .....|.|+|-...|++- ..|.|+||....--.|.-.+
T Consensus       261 ---geYv~a~s~~aHaLYIWE~~~Gs--LVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~enwsafA  331 (405)
T KOG1273|consen  261 ---GEYVCAGSARAHALYIWEKSIGS--LVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQVENWSAFA  331 (405)
T ss_pred             ---ccEEEeccccceeEEEEecCCcc--eeeeecCCchhheeecccccceeeeeec-cCCceEEEEeecccchhhcC
Confidence               66655544 56779999866543  234555554 567899999999999988 67899999977655555433

>KOG2055|consensus

Probab=99.67  E-value=6.9e-15  Score=128.98  Aligned_cols=202  Identities=15%  Similarity=0.200  Sum_probs=147.1

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCc-EEEEeecCCeEEEEEee
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL-ILACGSSDGTISFLTYM  144 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-~lasgs~d~~i~i~~~~  144 (318)
                      .+.|+++.| ||. ..+|.+|+.|++++||.++......++.+..-..+|.++.|.|+  +. .+++++.-.....||+.
T Consensus       213 ~~~I~sv~F-Hp~-~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~--G~~~i~~s~rrky~ysyDle  288 (514)
T KOG2055|consen  213 HGGITSVQF-HPT-APLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPN--GHSVIFTSGRRKYLYSYDLE  288 (514)
T ss_pred             cCCceEEEe-cCC-CceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCC--CceEEEecccceEEEEeecc
Confidence            467999999 664 78999999999999998875432233344445678999999998  44 78888888888889875


Q ss_pred             cCCCCcceeeeccccc-ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762         145 SDTNSWESRKIAAHTI-GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV  223 (318)
Q Consensus       145 ~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V  223 (318)
                      ..+- .++...-++.. .+.....+|+                 +++||..|..|-|+|....+++++....++|   .|
T Consensus       289 ~ak~-~k~~~~~g~e~~~~e~FeVShd-----------------~~fia~~G~~G~I~lLhakT~eli~s~KieG---~v  347 (514)
T KOG2055|consen  289 TAKV-TKLKPPYGVEEKSMERFEVSHD-----------------SNFIAIAGNNGHIHLLHAKTKELITSFKIEG---VV  347 (514)
T ss_pred             cccc-ccccCCCCcccchhheeEecCC-----------------CCeEEEcccCceEEeehhhhhhhhheeeecc---EE
Confidence            4321 11222224432 2344555665                 4789999999999999998887765555554   48


Q ss_pred             eEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE--EEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW--NVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~--~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .+++|+.+    +..|..++.+|.|.+||+....+...   ..-++.|.  +++-|++|.+||+|+.-|.|.|||.+.
T Consensus       348 ~~~~fsSd----sk~l~~~~~~GeV~v~nl~~~~~~~r---f~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s  418 (514)
T KOG2055|consen  348 SDFTFSSD----SKELLASGGTGEVYVWNLRQNSCLHR---FVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS  418 (514)
T ss_pred             eeEEEecC----CcEEEEEcCCceEEEEecCCcceEEE---EeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence            99999975    78888899999999999987542211   11233343  555668999999999999999999544

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.6e-14  Score=133.88  Aligned_cols=214  Identities=15%  Similarity=0.185  Sum_probs=142.5

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC---eEEEEeCCCCcEEEEEEecC
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR---KVIIWRGDNGNWFKYYEYNN  110 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg---~v~vWd~~~~~~~~~~~~~~  110 (318)
                      +..|.|||.+..            ....+..|...+.+..|++  +|+.|+.++.++   .|.+||+.+++......+.+
T Consensus       183 ~~~i~i~d~dg~------------~~~~lt~~~~~v~~p~wSP--DG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g  248 (429)
T PRK01742        183 PYEVRVADYDGF------------NQFIVNRSSQPLMSPAWSP--DGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRG  248 (429)
T ss_pred             eEEEEEECCCCC------------CceEeccCCCccccceEcC--CCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCC
Confidence            578999998621            2355677888999999974  589999887653   69999998775444433443


Q ss_pred             CCcCeEEEEeeCCCCCcEEEEe-ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         111 HDSSVNSIAWAPKEFGLILACG-SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       111 h~~~v~~v~~~p~~~~~~lasg-s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      |   ...++|+|+  +..++.+ +.++.+.||.+.....  ....+..+...+....|+|+                 +.
T Consensus       249 ~---~~~~~wSPD--G~~La~~~~~~g~~~Iy~~d~~~~--~~~~lt~~~~~~~~~~wSpD-----------------G~  304 (429)
T PRK01742        249 H---NGAPAFSPD--GSRLAFASSKDGVLNIYVMGANGG--TPSQLTSGAGNNTEPSWSPD-----------------GQ  304 (429)
T ss_pred             c---cCceeECCC--CCEEEEEEecCCcEEEEEEECCCC--CeEeeccCCCCcCCEEECCC-----------------CC
Confidence            3   346899999  5555554 5688877776543322  23455556666778999997                 34


Q ss_pred             eEE-EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762         190 RLV-SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD  268 (318)
Q Consensus       190 ~la-sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~  268 (318)
                      .|+ ++..++..+||++....... ..+ ++..  ..+.|+|+    |.+|+.++.++ +.+||+.+....  .....+ 
T Consensus       305 ~i~f~s~~~g~~~I~~~~~~~~~~-~~l-~~~~--~~~~~SpD----G~~ia~~~~~~-i~~~Dl~~g~~~--~lt~~~-  372 (429)
T PRK01742        305 SILFTSDRSGSPQVYRMSASGGGA-SLV-GGRG--YSAQISAD----GKTLVMINGDN-VVKQDLTSGSTE--VLSSTF-  372 (429)
T ss_pred             EEEEEECCCCCceEEEEECCCCCe-EEe-cCCC--CCccCCCC----CCEEEEEcCCC-EEEEECCCCCeE--EecCCC-
Confidence            555 44467888999865321111 112 3333  45788986    77888888776 455888764311  111122 


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                       ...+++|+|||++|+.++.++..++|.+.
T Consensus       373 -~~~~~~~sPdG~~i~~~s~~g~~~~l~~~  401 (429)
T PRK01742        373 -LDESPSISPNGIMIIYSSTQGLGKVLQLV  401 (429)
T ss_pred             -CCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence             23578999999999999999999998863

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.6e-14  Score=133.91  Aligned_cols=221  Identities=15%  Similarity=0.111  Sum_probs=145.7

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCC---cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDH---TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .++|...+..++|+|||++|+..+.++   .|.+||+..+         ....+..+.+|.   ..++|++  +|+.|+.
T Consensus       199 lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg---------~~~~l~~~~g~~---~~~~wSP--DG~~La~  264 (429)
T PRK01742        199 VNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSG---------ARKVVASFRGHN---GAPAFSP--DGSRLAF  264 (429)
T ss_pred             eccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCC---------ceEEEecCCCcc---CceeECC--CCCEEEE
Confidence            356788999999999999999887543   6999998632         123445555554   3579974  5888877


Q ss_pred             EE-CCCeEEEE--eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          86 CS-YDRKVIIW--RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        86 ~s-~Dg~v~vW--d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      ++ .+|.+.||  |+.++...   .+..+...+..++|+|+  +..++ +...++...||+.......  ...+ .+.. 
T Consensus       265 ~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpD--G~~i~f~s~~~g~~~I~~~~~~~~~--~~~l-~~~~-  335 (429)
T PRK01742        265 ASSKDGVLNIYVMGANGGTPS---QLTSGAGNNTEPSWSPD--GQSILFTSDRSGSPQVYRMSASGGG--ASLV-GGRG-  335 (429)
T ss_pred             EEecCCcEEEEEEECCCCCeE---eeccCCCCcCCEEECCC--CCEEEEEECCCCCceEEEEECCCCC--eEEe-cCCC-
Confidence            64 68887776  55555432   34456667889999999  44444 4456788889887543321  1222 3332 


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                       ....|+|+                 +++|+..+.++. .+||+.+++.....  ..+  ....+.|+|+    |.+|+.
T Consensus       336 -~~~~~SpD-----------------G~~ia~~~~~~i-~~~Dl~~g~~~~lt--~~~--~~~~~~~sPd----G~~i~~  388 (429)
T PRK01742        336 -YSAQISAD-----------------GKTLVMINGDNV-VKQDLTSGSTEVLS--STF--LDESPSISPN----GIMIIY  388 (429)
T ss_pred             -CCccCCCC-----------------CCEEEEEcCCCE-EEEECCCCCeEEec--CCC--CCCCceECCC----CCEEEE
Confidence             34678886                 467877777664 45898877543221  122  2356789996    889999


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT  279 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd  279 (318)
                      ++.++.+++|.+..........+..+.+.+...+|||-
T Consensus       389 ~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        389 SSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             EEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence            99999888887532211224455667778889999984

>KOG1334|consensus

Probab=99.65  E-value=1.1e-15  Score=134.67  Aligned_cols=272  Identities=17%  Similarity=0.152  Sum_probs=175.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      -+.+|.+.|+.+-|+..|..|+|||.|..|.+||....          ...+.--.+|...|....|.+..+...+++++
T Consensus       137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~----------~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s  206 (559)
T KOG1334|consen  137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSG----------SPKLSFESGHCNNVFQAKFIPFSGDRTIVTSS  206 (559)
T ss_pred             cccCCCCccceeeecccCceeeccCccceEEeehhhcc----------CcccccccccccchhhhhccCCCCCcCceecc
Confidence            45689999999999999999999999999999998632          12344456899999999997666677899999


Q ss_pred             CCCeEEEEeCCCCcEE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc---ccc
Q psy2762          88 YDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI---GCN  163 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~---~v~  163 (318)
                      .||.|++=.+...... .+..+..|.++|.-++.-|+.+ .-|.+++.|+.+.-.|++.+...........+..   ...
T Consensus       207 ~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp-~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~  285 (559)
T KOG1334|consen  207 RDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSP-KPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLY  285 (559)
T ss_pred             ccCceeeeeeccccceecceecccccCccceeeecCCCC-CcccccccccceeeeeeccCCccceeeeeccCCccceeee
Confidence            9999999876544332 2445567999999999999864 4577888999988777765542211111111211   223


Q ss_pred             eeeeCCCCCC----------Ccccc-----ccCC-----C------CCCccceEEEe-------------cCCCeEEEEE
Q psy2762         164 AVSWGPGIGS----------LSELD-----LKGS-----K------LGGVAKRLVSG-------------GCDNLIKIWK  204 (318)
Q Consensus       164 ~~~~~p~~~~----------~~~~~-----~~~~-----~------~~~~~~~lasg-------------s~d~~i~iwd  204 (318)
                      .++..|....          ....+     .+.+     .      ..+ ....++|             -.|--|++|+
T Consensus       286 ~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d-~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~  364 (559)
T KOG1334|consen  286 TIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVED-DPVNITGLVYSHDGSELLASYNDEDIYLFN  364 (559)
T ss_pred             eEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCcccccc-CcccceeEEecCCccceeeeecccceEEec
Confidence            4444442110          00000     0000     0      000 0111111             2233566664


Q ss_pred             ccC--C-e--------EEEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         205 QEG--D-K--------WIEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       205 ~~~--~-~--------~~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      ..-  + +        ......++||..  .|.+|.|-   ++...+++|||.=|.|.||+-.+...  +..+.+-...|
T Consensus       365 ~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFf---GPrsEyVvSGSDCGhIFiW~K~t~ei--i~~MegDr~VV  439 (559)
T KOG1334|consen  365 KSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFF---GPRSEYVVSGSDCGHIFIWDKKTGEI--IRFMEGDRHVV  439 (559)
T ss_pred             cccccCCCCCCCcchhhccchhhcccccccccceeeec---cCccceEEecCccceEEEEecchhHH--HHHhhcccceE
Confidence            221  1 0        111233677754  47777663   22467899999999999998766431  11222222389


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      +.+.=+|.=..|||.|-|..|+||-
T Consensus       440 NCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  440 NCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             eccCCCCCCchhhccCCccceeeec
Confidence            9999999999999999999999996

>KOG1188|consensus

Probab=99.65  E-value=1.1e-14  Score=123.44  Aligned_cols=197  Identities=14%  Similarity=0.194  Sum_probs=141.2

Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc-
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-  159 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-  159 (318)
                      ..+|.+-..|.|+++|..+++.  ...+.+|+..++.+.|...+....+.+++.||+|++||++...... ......|+ 
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~--l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a-~~~~~~~~~  117 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQL--LEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESA-RISWTQQSG  117 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhh--hheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhh-heeccCCCC
Confidence            5678888899999999888763  3456788999999999876556789999999999999997665321 12222343 


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEec----CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG----CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs----~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      .+-.+++-.-.                 .+.+++|.    .|-.|.+||.+..+...-.-.+.|.+.|++|+|+|.   +
T Consensus       118 ~~f~~ld~nck-----------------~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~---~  177 (376)
T KOG1188|consen  118 TPFICLDLNCK-----------------KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS---D  177 (376)
T ss_pred             CcceEeeccCc-----------------CCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC---C
Confidence            12222222111                 24566663    355799999887543112234789999999999998   6


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCC
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ..+|+|||-||-|.|+|++..... ..++.  .+...|..+.|.-++ +.|.+-+-..+..+|+.+.+.
T Consensus       178 pnlLlSGSvDGLvnlfD~~~d~Ee-DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~  245 (376)
T KOG1188|consen  178 PNLLLSGSVDGLVNLFDTKKDNEE-DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS  245 (376)
T ss_pred             CCeEEeecccceEEeeecCCCcch-hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence            889999999999999999875321 11121  234569999999888 347777888999999988865

>KOG1240|consensus

Probab=99.64  E-value=9.7e-14  Score=134.24  Aligned_cols=263  Identities=14%  Similarity=0.116  Sum_probs=170.4

Q ss_pred             CCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -|+..|..++.++ .+.+++|||.||+|||||..+... +   ........++.--...+.++....  .++.+|.++.|
T Consensus      1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~-~---~~s~rS~ltys~~~sr~~~vt~~~--~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEG-E---GGSARSELTYSPEGSRVEKVTMCG--NGDQFAVSTKD 1119 (1431)
T ss_pred             hccccccceeecCCCCceEEEecCCceEEEeeehhhhc-C---cceeeeeEEEeccCCceEEEEecc--CCCeEEEEcCC
Confidence            5888888988875 459999999999999999863211 0   011112233433356677776642  47899999999


Q ss_pred             CeEEEEeCCC--CcE---EEEEE--ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          90 RKVIIWRGDN--GNW---FKYYE--YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        90 g~v~vWd~~~--~~~---~~~~~--~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      |.|++.+++.  ...   .+...  ..+.+..|..-++.......+++.+...+.|..||.+.....|..+.- ...+-|
T Consensus      1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~-~~hG~v 1198 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ-LRHGLV 1198 (1431)
T ss_pred             CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC-ccccce
Confidence            9999998865  211   11111  222223344555555443347888888889999998766544433222 223457


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      ++++-+|.                 ++++++|...|.+-+||++-+.++....+..+ .+++.+..+|..... +..+++
T Consensus      1199 TSi~idp~-----------------~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~~~~-S~~vs~ 1259 (1431)
T KOG1240|consen 1199 TSIVIDPW-----------------CNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTYPQE-SVSVSA 1259 (1431)
T ss_pred             eEEEecCC-----------------ceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccCCCC-ceEEEe
Confidence            78887875                 47999999999999999987766555555444 789999998874332 455555


Q ss_pred             eC--CCeEEEEEcCCCcceeeEEee-----------------ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         243 SQ--DRKVIIWTSNDYVTWTPFIMN-----------------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       243 s~--D~~i~vw~~~~~~~~~~~~~~-----------------~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +.  -+-|-+|+..++.+.+.....                 .+.-......+.--+..+.+|+.|+.+|.||...
T Consensus      1260 ~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1260 GSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred             cccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence            54  677999998876532211000                 0111233444544566888999999999999544

>KOG1523|consensus

Probab=99.63  E-value=2.6e-14  Score=120.28  Aligned_cols=210  Identities=21%  Similarity=0.340  Sum_probs=159.6

Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY  143 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~  143 (318)
                      -..+|+|-+|+.  |...+|.+-....|.|+...+.+ +....++..|...|++|+|+|.  ...+++++.|..-.+|..
T Consensus         9 ~~~pitchAwn~--drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~--snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen    9 LLEPITCHAWNS--DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPK--SNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             ccCceeeeeecC--CCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCC--CCceeEccCCCCcccccc
Confidence            457899999973  58999999999999999987776 6777788899999999999998  557899999999999986


Q ss_pred             ecCCCCcce-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCC
Q psy2762         144 MSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHS  220 (318)
Q Consensus       144 ~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~  220 (318)
                      ..+. .|.. ..+..+.....++.|+|.                 .+.||+||.-..|.||=++..+  ++..+.=+-+.
T Consensus        85 ~~~~-~WkptlvLlRiNrAAt~V~WsP~-----------------enkFAVgSgar~isVcy~E~ENdWWVsKhikkPir  146 (361)
T KOG1523|consen   85 PSGG-TWKPTLVLLRINRAATCVKWSPK-----------------ENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIR  146 (361)
T ss_pred             CCCC-eeccceeEEEeccceeeEeecCc-----------------CceEEeccCccEEEEEEEecccceehhhhhCCccc
Confidence            4332 3432 234467777899999997                 4679999999999999765432  22222224567


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC-----Cc---ceeeEE--------eeecCCcEEEEEEcCCCCEEE
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-----YV---TWTPFI--------MNTFDDVVWNVSWSLTGDILT  284 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~-----~~---~~~~~~--------~~~~~~~v~~v~~spdg~~l~  284 (318)
                      ..|.+++|+|.    +-+|+.||.|+.+||+..--     ..   .|-..+        ...-.++|..|.|+|+|..|+
T Consensus       147 Stv~sldWhpn----nVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~la  222 (361)
T KOG1523|consen  147 STVTSLDWHPN----NVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLA  222 (361)
T ss_pred             cceeeeeccCC----cceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEee
Confidence            88999999995    78999999999999996311     10   111000        111236899999999999999


Q ss_pred             EEeCCCeEEEEEECCC
Q psy2762         285 VSCGDNSVSLWKENTD  300 (318)
Q Consensus       285 s~~~D~~v~iW~~~~~  300 (318)
                      =.+-|.++.+=|....
T Consensus       223 wv~Hds~v~~~da~~p  238 (361)
T KOG1523|consen  223 WVGHDSTVSFVDAAGP  238 (361)
T ss_pred             EecCCCceEEeecCCC
Confidence            9999999988774443

>KOG1517|consensus

Probab=99.62  E-value=1.1e-13  Score=132.16  Aligned_cols=252  Identities=12%  Similarity=0.127  Sum_probs=164.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc---ccCeEEEEecCCCCCcEEEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH---SGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h---~~~V~~v~~~~~~~~~~las~s   87 (318)
                      |....-..+.|+|-...|+++..--+|+|||.++           +..+..+..+   ...|..+.+.+..|..+|.+|+
T Consensus      1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~-----------~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas 1130 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEK-----------GRLLNGFDNGAFPDTRVSDLELINEQDDALLLTAS 1130 (1387)
T ss_pred             cCCCCCceeeecCCCceeEEcCCcceEEEEeccc-----------CceeccccCCCCCCCccceeeeecccchhheeeec
Confidence            3333456688999999999887677999999873           3445455433   3558888888777888999999


Q ss_pred             CCCeEEEEeCCCC---cEEEEEE---e----cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc
Q psy2762          88 YDRKVIIWRGDNG---NWFKYYE---Y----NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        88 ~Dg~v~vWd~~~~---~~~~~~~---~----~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      .||.||||+-...   +...+..   +    .+..+.-.-++|... .+.++++|. -..|+|||.....   ....+..
T Consensus      1131 ~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~-~G~Ll~tGd-~r~IRIWDa~~E~---~~~diP~ 1205 (1387)
T KOG1517|consen 1131 SDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQ-SGHLLVTGD-VRSIRIWDAHKEQ---VVADIPY 1205 (1387)
T ss_pred             cCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhh-CCeEEecCC-eeEEEEEecccce---eEeeccc
Confidence            9999999974221   1111111   1    111222244678765 366666654 7789999974322   1111211


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-EEEEEcccCCCC--eeEEEEccCCCC
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDW--VRDVAWAPSWGL  234 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~--V~~v~~sp~~~~  234 (318)
                       .....--+.+++.              ..+..||.|-.||.||+||.+.... ........|+..  |..+.+-+.+  
T Consensus      1206 -~s~t~vTaLS~~~--------------~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G-- 1268 (1387)
T KOG1517|consen 1206 -GSSTLVTALSADL--------------VHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQG-- 1268 (1387)
T ss_pred             -CCCccceeecccc--------------cCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCC--
Confidence             1111112233321              1146899999999999999775422 123345678887  9999998852  


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC---CcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD---DVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~---~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      .+ .|+|||.||.|++||+.............|-   +.+.++..+++...+|+|+. +.+.||++
T Consensus      1269 ~~-elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1269 LG-ELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred             Cc-ceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec
Confidence            12 6999999999999999863211111222222   24889999999999999998 99999984

>KOG1963|consensus

Probab=99.62  E-value=4.6e-13  Score=125.84  Aligned_cols=275  Identities=17%  Similarity=0.206  Sum_probs=169.5

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..-|.-.+++.+++|+++++|++-.||.|.||.--..  +.     .......+.=|.+.|++++|++  +|.+|.|||
T Consensus       200 ~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~--~~-----~~~t~t~lHWH~~~V~~L~fS~--~G~~LlSGG  270 (792)
T KOG1963|consen  200 ITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGS--SD-----DSETCTLLHWHHDEVNSLSFSS--DGAYLLSGG  270 (792)
T ss_pred             hhhhhcccceeEEeccccceEEEeccCCcEEEEecccc--cc-----ccccceEEEecccccceeEEec--CCceEeecc
Confidence            34458888999999999999999999999999964311  00     1112455677999999999985  599999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc--------cc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA--------HT  159 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~--------h~  159 (318)
                      ..+.+-+|...++..  .+ ++.-.++|..+.++||  +.+.+....|..|.+....+..-...+..+..        .+
T Consensus       271 ~E~VLv~Wq~~T~~k--qf-LPRLgs~I~~i~vS~d--s~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~  345 (792)
T KOG1963|consen  271 REGVLVLWQLETGKK--QF-LPRLGSPILHIVVSPD--SDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQ  345 (792)
T ss_pred             cceEEEEEeecCCCc--cc-ccccCCeeEEEEEcCC--CCeEEEEecCceEEEEeccchhhhhhccCccCCCcccccccc
Confidence            999999999888752  11 3455789999999998  56677777899888764311110000000000        00


Q ss_pred             c---------ccceeeeCCCCCCCccccc------------cCCC---------------CCCccceEEEe--------c
Q psy2762         160 I---------GCNAVSWGPGIGSLSELDL------------KGSK---------------LGGVAKRLVSG--------G  195 (318)
Q Consensus       160 ~---------~v~~~~~~p~~~~~~~~~~------------~~~~---------------~~~~~~~lasg--------s  195 (318)
                      .         ....+++.+..+.+...++            ..+.               ..-.+.+++|.        .
T Consensus       346 ~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~  425 (792)
T KOG1963|consen  346 SLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNF  425 (792)
T ss_pred             ccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhc
Confidence            0         0112222222111110000            0000               00114456655        2


Q ss_pred             CCC--eEEEEEccCC--eEEEEE-EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-------ceeeE-
Q psy2762         196 CDN--LIKIWKQEGD--KWIEET-KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-------TWTPF-  262 (318)
Q Consensus       196 ~d~--~i~iwd~~~~--~~~~~~-~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------~~~~~-  262 (318)
                      .||  .+|+|....+  .+.... ...-|...+...++.+..  ....++++|.|+.++||-+.+..       .|.-. 
T Consensus       426 ~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~--rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~  503 (792)
T KOG1963|consen  426 FDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPT--RSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKA  503 (792)
T ss_pred             cCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCc--ccceeEEeccCCeEEEEEEecccccCcCccceEEee
Confidence            333  5788965443  222222 234577766666666542  23389999999999999874422       12111 


Q ss_pred             EeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         263 IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       263 ~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ...=|..++.++.|+.||..|+ .+.|++|.|||-.+
T Consensus       504 i~sy~k~~i~a~~fs~dGslla-~s~~~~Itiwd~~~  539 (792)
T KOG1963|consen  504 IGSYHKTPITALCFSQDGSLLA-VSFDDTITIWDYDT  539 (792)
T ss_pred             eeccccCcccchhhcCCCcEEE-EecCCEEEEecCCC
Confidence            1111456889999999997775 66788999999665

>KOG0650|consensus

Probab=99.61  E-value=9.5e-14  Score=125.42  Aligned_cols=229  Identities=19%  Similarity=0.224  Sum_probs=144.0

Q ss_pred             EEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762          58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT  137 (318)
Q Consensus        58 ~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~  137 (318)
                      +-..++||++.|.+++.. | .|.+||||+.||+|+||.+.+++++.+..+.   +.|.||+|+|.....+||++-.+. 
T Consensus       392 ~~lvyrGHtg~Vr~iSvd-p-~G~wlasGsdDGtvriWEi~TgRcvr~~~~d---~~I~~vaw~P~~~~~vLAvA~~~~-  465 (733)
T KOG0650|consen  392 CALVYRGHTGLVRSISVD-P-SGEWLASGSDDGTVRIWEIATGRCVRTVQFD---SEIRSVAWNPLSDLCVLAVAVGEC-  465 (733)
T ss_pred             eeeeEeccCCeEEEEEec-C-CcceeeecCCCCcEEEEEeecceEEEEEeec---ceeEEEEecCCCCceeEEEEecCc-
Confidence            345688999999999975 3 5999999999999999999999877766654   579999999987666666665554 


Q ss_pred             EEEEEeecCCCCcc--eeeecc-c---ccc-cceeeeCCCC---CCCc-cccc------cCCCCCCccceEEEecCC---
Q psy2762         138 ISFLTYMSDTNSWE--SRKIAA-H---TIG-CNAVSWGPGI---GSLS-ELDL------KGSKLGGVAKRLVSGGCD---  197 (318)
Q Consensus       138 i~i~~~~~~~~~~~--~~~~~~-h---~~~-v~~~~~~p~~---~~~~-~~~~------~~~~~~~~~~~lasgs~d---  197 (318)
                      +.|.+...+.+...  ...+.. -   ..+ -..+.|++..   .+.. ++-+      +.-.....|.||++...+   
T Consensus       466 ~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~  545 (733)
T KOG0650|consen  466 VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGN  545 (733)
T ss_pred             eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCc
Confidence            55544333321000  000000 0   000 0112344321   0000 0000      000111125788877554   


Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS  277 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s  277 (318)
                      ..|.|.++..+.-  ...|....+.|.++.|+|.    ..+|..+ ..+.|||||+....  ....+.....+|.+++.+
T Consensus       546 ~~VliHQLSK~~s--Q~PF~kskG~vq~v~FHPs----~p~lfVa-Tq~~vRiYdL~kqe--lvKkL~tg~kwiS~msih  616 (733)
T KOG0650|consen  546 KSVLIHQLSKRKS--QSPFRKSKGLVQRVKFHPS----KPYLFVA-TQRSVRIYDLSKQE--LVKKLLTGSKWISSMSIH  616 (733)
T ss_pred             ceEEEEecccccc--cCchhhcCCceeEEEecCC----CceEEEE-eccceEEEehhHHH--HHHHHhcCCeeeeeeeec
Confidence            4688888765431  1234445566999999996    3344433 46789999987632  112233455789999999


Q ss_pred             CCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         278 LTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       278 pdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |.|.-|+.++.|+.+..+|++..+
T Consensus       617 p~GDnli~gs~d~k~~WfDldlss  640 (733)
T KOG0650|consen  617 PNGDNLILGSYDKKMCWFDLDLSS  640 (733)
T ss_pred             CCCCeEEEecCCCeeEEEEcccCc
Confidence            999999999999999888887754

>KOG0771|consensus

Probab=99.60  E-value=5.6e-14  Score=122.15  Aligned_cols=204  Identities=14%  Similarity=0.134  Sum_probs=137.9

Q ss_pred             EEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC
Q psy2762          70 WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS  149 (318)
Q Consensus        70 ~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~  149 (318)
                      ..++|++  +|..|++++.||++|||+..+..  .......|...|.++.|+||  ++++++-+.| ..++|+...+.. 
T Consensus       148 k~vaf~~--~gs~latgg~dg~lRv~~~Ps~~--t~l~e~~~~~eV~DL~FS~d--gk~lasig~d-~~~VW~~~~g~~-  219 (398)
T KOG0771|consen  148 KVVAFNG--DGSKLATGGTDGTLRVWEWPSML--TILEEIAHHAEVKDLDFSPD--GKFLASIGAD-SARVWSVNTGAA-  219 (398)
T ss_pred             eEEEEcC--CCCEeeeccccceEEEEecCcch--hhhhhHhhcCccccceeCCC--CcEEEEecCC-ceEEEEeccCch-
Confidence            4577764  58999999999999999955432  22334568899999999999  7889999999 889999865531 


Q ss_pred             cceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC---eEEEEEEcccCCCCee
Q psy2762         150 WESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD---KWIEETKLENHSDWVR  224 (318)
Q Consensus       150 ~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~---~~~~~~~~~~h~~~V~  224 (318)
                        +....  .-......+.|+.+..+            +.-..++.-..-+.|+.||...-   ...+..+...-...|.
T Consensus       220 --~a~~t~~~k~~~~~~cRF~~d~~~------------~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siS  285 (398)
T KOG0771|consen  220 --LARKTPFSKDEMFSSCRFSVDNAQ------------ETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSIS  285 (398)
T ss_pred             --hhhcCCcccchhhhhceecccCCC------------ceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcce
Confidence              11111  11112334455543210            00122334444456777664321   1112222222334589


Q ss_pred             EEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         225 DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       225 ~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +++-+++    |+++|.|+.||.|-|++..+... .......|...|..|+|+||.+++++.+.|.+.++-.+..+
T Consensus       286 sl~VS~d----Gkf~AlGT~dGsVai~~~~~lq~-~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd  356 (398)
T KOG0771|consen  286 SLAVSDD----GKFLALGTMDGSVAIYDAKSLQR-LQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD  356 (398)
T ss_pred             eEEEcCC----CcEEEEeccCCcEEEEEeceeee-eEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence            9999996    99999999999999999876432 12234567789999999999999999999999999987664

>KOG0649|consensus

Probab=99.59  E-value=1.6e-13  Score=111.59  Aligned_cols=200  Identities=17%  Similarity=0.239  Sum_probs=132.6

Q ss_pred             CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC--------cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG--------NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~--------~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                      .|..-+|+++  +++|+.|+.+|.|.+..+.+-        .........+|.++|+.++|+.+    ++++|+ ||.|+
T Consensus        12 tvf~qa~sp~--~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~----~Lls~g-dG~V~   84 (325)
T KOG0649|consen   12 TVFAQAISPS--KQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDD----FLLSGG-DGLVY   84 (325)
T ss_pred             HHHHHhhCCc--ceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehh----heeecc-CceEE
Confidence            3555567654  899999999999999977431        11234455789999999999943    344444 59999


Q ss_pred             EEEeecCCCCccee---eec--ccc-----cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762         140 FLTYMSDTNSWESR---KIA--AHT-----IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK  209 (318)
Q Consensus       140 i~~~~~~~~~~~~~---~~~--~h~-----~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~  209 (318)
                      -|...........+   ++.  -|.     ..|+.+...|.                 .+.++.++.|+.++-||+++++
T Consensus        85 gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~-----------------enSi~~AgGD~~~y~~dlE~G~  147 (325)
T KOG0649|consen   85 GWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPS-----------------ENSILFAGGDGVIYQVDLEDGR  147 (325)
T ss_pred             EeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccC-----------------CCcEEEecCCeEEEEEEecCCE
Confidence            87654332110000   111  111     23455555553                 2457777899999999999997


Q ss_pred             EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE-------eeec-CCcEEEEEEcCCCC
Q psy2762         210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI-------MNTF-DDVVWNVSWSLTGD  281 (318)
Q Consensus       210 ~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~-------~~~~-~~~v~~v~~spdg~  281 (318)
                      .  ..++.||++.|.+|.--.    ...++.||++||++||||.++...-+...       +.++ ..+|..++-+  ..
T Consensus       148 i--~r~~rGHtDYvH~vv~R~----~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--ed  219 (325)
T KOG0649|consen  148 I--QREYRGHTDYVHSVVGRN----ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--ED  219 (325)
T ss_pred             E--EEEEcCCcceeeeeeecc----cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--Cc
Confidence            5  456899999999997632    24579999999999999998764321111       1111 2457666664  56


Q ss_pred             EEEEEeCCCeEEEEEECCC
Q psy2762         282 ILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       282 ~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|++|+. ..+.||.+...
T Consensus       220 WlvCGgG-p~lslwhLrss  237 (325)
T KOG0649|consen  220 WLVCGGG-PKLSLWHLRSS  237 (325)
T ss_pred             eEEecCC-CceeEEeccCC
Confidence            9987764 57899998764

>KOG2111|consensus

Probab=99.56  E-value=4e-12  Score=107.16  Aligned_cols=236  Identities=16%  Similarity=0.185  Sum_probs=146.8

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC--eEEEEecCCCCCcEEE-EEECC--
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP--VWQVAWAHPQFGTLLA-SCSYD--   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~~~~~~~~~la-s~s~D--   89 (318)
                      ....++|+.|..-++. +.|.-.|||+.+ +..+.          ..-+-+.+.  +..+-|.    .++|| .||.+  
T Consensus         7 ~~lsvs~NQD~ScFav-a~~~Gfriyn~~-P~ke~----------~~r~~~~~G~~~veMLfR----~N~laLVGGg~~p   70 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAV-ATDTGFRIYNCD-PFKES----------ASRQFIDGGFKIVEMLFR----SNYLALVGGGSRP   70 (346)
T ss_pred             ceeEEEEccCCceEEE-EecCceEEEecC-chhhh----------hhhccccCchhhhhHhhh----hceEEEecCCCCC
Confidence            4556899998876665 456668999987 32110          000111111  1112221    23333 34333  


Q ss_pred             ----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccccc
Q psy2762          90 ----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCN  163 (318)
Q Consensus        90 ----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~  163 (318)
                          ..|.|||=...++  +.++. ...+|.+|.+.++    .++.. ..+.|.+|.+..+.+  .++.+.  ..+.+. 
T Consensus        71 ky~pNkviIWDD~k~~~--i~el~-f~~~I~~V~l~r~----riVvv-l~~~I~VytF~~n~k--~l~~~et~~NPkGl-  139 (346)
T KOG2111|consen   71 KYPPNKVIIWDDLKERC--IIELS-FNSEIKAVKLRRD----RIVVV-LENKIYVYTFPDNPK--LLHVIETRSNPKGL-  139 (346)
T ss_pred             CCCCceEEEEecccCcE--EEEEE-eccceeeEEEcCC----eEEEE-ecCeEEEEEcCCChh--heeeeecccCCCce-
Confidence                4799999444443  33332 4688999999986    34443 356889998743321  222222  122232 


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEE-ecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVS-GGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~las-gs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                       ++.+|...               ..+||. |-.-|.|+|-|+...+.-....+++|...|.|++.+.+    |+.+||+
T Consensus       140 -C~~~~~~~---------------k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~----Gt~vATa  199 (346)
T KOG2111|consen  140 -CSLCPTSN---------------KSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQ----GTLVATA  199 (346)
T ss_pred             -EeecCCCC---------------ceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCC----ccEEEEe
Confidence             22333211               124443 34457799988765432123556899999999999986    8999999


Q ss_pred             eCCCe-EEEEEcCCCcceeeEEee-e-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         243 SQDRK-VIIWTSNDYVTWTPFIMN-T-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       243 s~D~~-i~vw~~~~~~~~~~~~~~-~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      |..|+ |||||..++...  .++. + -.+.|..++||||+.+||.+|+.|||.|+.+..
T Consensus       200 StkGTLIRIFdt~~g~~l--~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  200 STKGTLIRIFDTEDGTLL--QELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             ccCcEEEEEEEcCCCcEe--eeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            99998 799999886532  2221 2 235799999999999999999999999999866

>KOG1524|consensus

Probab=99.56  E-value=1.3e-13  Score=123.26  Aligned_cols=253  Identities=15%  Similarity=0.194  Sum_probs=161.2

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .|.+.|.++.+......+.+++.+.-+.-||+......-...++..  +.+ ..|.+.   ..-..-...+.|+.++.||
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df--~pt-~~h~~~---rs~~~g~~~d~~~i~s~DG   85 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDF--VPT-DMHLGG---RSSGGGKGSDTLLICSNDG   85 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCccc--CCc-cccccc---cccCCCCCcceEEEEcCCc
Confidence            5888898899988888777766555555555532100000000000  000 012111   1100011245788888899


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-eecccccccceeeeCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-KIAAHTIGCNAVSWGP  169 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p  169 (318)
                      .+.+-+-. ++  ....+..|.+.+.|-.|+|+  +.-+++.+.||.|++|.- .+.    ++ .+.....+|.+++|.|
T Consensus        86 kf~il~k~-~r--VE~sv~AH~~A~~~gRW~~d--GtgLlt~GEDG~iKiWSr-sGM----LRStl~Q~~~~v~c~~W~p  155 (737)
T KOG1524|consen   86 RFVILNKS-AR--VERSISAHAAAISSGRWSPD--GAGLLTAGEDGVIKIWSR-SGM----LRSTVVQNEESIRCARWAP  155 (737)
T ss_pred             eEEEeccc-ch--hhhhhhhhhhhhhhcccCCC--CceeeeecCCceEEEEec-cch----HHHHHhhcCceeEEEEECC
Confidence            98887532 22  12245689999999999999  666889999999999963 221    11 1234566899999999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +..                ..+.+.+.  .+.|=-+.-+  ......+.|.+-|.+++|+|.    ...++|||+|-..+
T Consensus       156 ~S~----------------~vl~c~g~--h~~IKpL~~n--~k~i~WkAHDGiiL~~~W~~~----s~lI~sgGED~kfK  211 (737)
T KOG1524|consen  156 NSN----------------SIVFCQGG--HISIKPLAAN--SKIIRWRAHDGLVLSLSWSTQ----SNIIASGGEDFRFK  211 (737)
T ss_pred             CCC----------------ceEEecCC--eEEEeecccc--cceeEEeccCcEEEEeecCcc----ccceeecCCceeEE
Confidence            732                34444443  3433323222  123456789999999999997    77999999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEee
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      |||..+..   ......|+-+|.+|+|.|| +.++.++ -+++|+=..++++-+...+.
T Consensus       212 vWD~~G~~---Lf~S~~~ey~ITSva~npd-~~~~v~S-~nt~R~~~p~~GSifnlsWS  265 (737)
T KOG1524|consen  212 IWDAQGAN---LFTSAAEEYAITSVAFNPE-KDYLLWS-YNTARFSSPRVGSIFNLSWS  265 (737)
T ss_pred             eecccCcc---cccCChhccceeeeeeccc-cceeeee-eeeeeecCCCccceEEEEEc
Confidence            99987643   3334567889999999999 6666666 46888766666665555444

>KOG0322|consensus

Probab=99.56  E-value=1.2e-13  Score=113.52  Aligned_cols=220  Identities=21%  Similarity=0.225  Sum_probs=147.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC-----------------------------CCC----C--
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-----------------------------DDS----H--   52 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-----------------------------~~~----~--   52 (318)
                      +...|...|+.+..-|+ ..|.+=+.|.++.+|++..+-..                             ++.    +  
T Consensus        51 ~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h  129 (323)
T KOG0322|consen   51 IRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETH  129 (323)
T ss_pred             hhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhh
Confidence            33457888998888787 45778899999999997631000                             000    0  


Q ss_pred             -CCcceE--EEE----ecccccCeEEEEecCCCCCc-EEEEEECCCeEEEEeCCCCcEE--------EEEEecCCCcCeE
Q psy2762          53 -SQKGTL--IAE----LKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWF--------KYYEYNNHDSSVN  116 (318)
Q Consensus        53 -~~~~~~--~~~----~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~v~vWd~~~~~~~--------~~~~~~~h~~~v~  116 (318)
                       .+.+..  +..    -.+-.+.|++..|.+..... +|+.|-++|.|.+||+.++...        .......|..+|.
T Consensus       130 ~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvl  209 (323)
T KOG0322|consen  130 KQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVL  209 (323)
T ss_pred             hhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcce
Confidence             000111  111    11335668888876543333 4445556899999999876321        1223446889999


Q ss_pred             EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee-ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec
Q psy2762         117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG  195 (318)
Q Consensus       117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs  195 (318)
                      ++.+.+..  ..=++|+.+..+..|.+.......+... +..-..++..+..-|+                 ++.+||++
T Consensus       210 sldyas~~--~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD-----------------~KIlATAG  270 (323)
T KOG0322|consen  210 SLDYASSC--DRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPD-----------------GKILATAG  270 (323)
T ss_pred             eeeechhh--cCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccC-----------------CcEEeecc
Confidence            99998763  2356777777888888754432222211 1122235666666665                 57899999


Q ss_pred             CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                      .|+.||||.-++..  +.+.++-|.+.|++|+|+|+    ...+|.+|.|++|.+|++
T Consensus       271 WD~RiRVyswrtl~--pLAVLkyHsagvn~vAfspd----~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  271 WDHRIRVYSWRTLN--PLAVLKYHSAGVNAVAFSPD----CELMAAASKDARISLWKL  322 (323)
T ss_pred             cCCcEEEEEeccCC--chhhhhhhhcceeEEEeCCC----CchhhhccCCceEEeeec
Confidence            99999999987765  46778889999999999996    578999999999999975

>KOG0644|consensus

Probab=99.55  E-value=1.2e-14  Score=135.58  Aligned_cols=214  Identities=17%  Similarity=0.262  Sum_probs=145.7

Q ss_pred             EEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762          58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT  137 (318)
Q Consensus        58 ~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~  137 (318)
                      .++.+.+|-.+|+|+.|..  .|.++++|+.|..|+||..+++.  +.....||.+.|..++.+..  +.++|++|.|..
T Consensus       182 ~ikrLlgH~naVyca~fDr--tg~~Iitgsdd~lvKiwS~et~~--~lAs~rGhs~ditdlavs~~--n~~iaaaS~D~v  255 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDR--TGRYIITGSDDRLVKIWSMETAR--CLASCRGHSGDITDLAVSSN--NTMIAAASNDKV  255 (1113)
T ss_pred             HHHHHHhhhhheeeeeecc--ccceEeecCccceeeeeeccchh--hhccCCCCccccchhccchh--hhhhhhcccCce
Confidence            3667889999999999963  59999999999999999977765  45567899999999999986  788999999999


Q ss_pred             EEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEE-EE
Q psy2762         138 ISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIE-ET  214 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~-~~  214 (318)
                      |++|....+.   .+..+.+|++.|++++|+|.                     ++.+.||++++||.+-..  ..+ ..
T Consensus       256 IrvWrl~~~~---pvsvLrghtgavtaiafsP~---------------------~sss~dgt~~~wd~r~~~~~y~prp~  311 (1113)
T KOG0644|consen  256 IRVWRLPDGA---PVSVLRGHTGAVTAIAFSPR---------------------ASSSDDGTCRIWDARLEPRIYVPRPL  311 (1113)
T ss_pred             EEEEecCCCc---hHHHHhccccceeeeccCcc---------------------ccCCCCCceEeccccccccccCCCCC
Confidence            9999874443   34456799999999999993                     467778888888755110  000 00


Q ss_pred             EcccCCCCeeEEEEccC---------------------------------CCCCccEEEEEeCCCeEEEEEcCCCcceee
Q psy2762         215 KLENHSDWVRDVAWAPS---------------------------------WGLSKCMIASCSQDRKVIIWTSNDYVTWTP  261 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~---------------------------------~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~  261 (318)
                      .+. -...+.++-|...                                 .+....+.+++=.+-.+.+|++....  ..
T Consensus       312 ~~~-~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~--l~  388 (1113)
T KOG0644|consen  312 KFT-EKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ--LL  388 (1113)
T ss_pred             Ccc-cccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccch--hh
Confidence            000 0011222222221                                 00011233333344556666655432  12


Q ss_pred             EEeeecCCcEEEEEEcCCCCE-EEEEeCCCeEEEEEECCCCceE
Q psy2762         262 FIMNTFDDVVWNVSWSLTGDI-LTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       262 ~~~~~~~~~v~~v~~spdg~~-l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      ..+.+|.+.+.-+.++|=... -.+++.||..-|||+..+..-+
T Consensus       389 H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik  432 (1113)
T KOG0644|consen  389 HNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIK  432 (1113)
T ss_pred             hhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcce
Confidence            345677889999999995544 4577899999999987765433

>KOG1310|consensus

Probab=99.54  E-value=2.6e-14  Score=127.96  Aligned_cols=174  Identities=21%  Similarity=0.255  Sum_probs=130.0

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      .+.|.||+|-|+++.|+.  +|.+|+|||.|-.+.|||....+..... -.+|...|.++.|-|...+.++++|..|..|
T Consensus        43 E~eL~GH~GCVN~LeWn~--dG~lL~SGSDD~r~ivWd~~~~KllhsI-~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i  119 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNA--DGELLASGSDDTRLIVWDPFEYKLLHSI-STGHTANIFSVKFVPYTNNRIVLSGAGDKLI  119 (758)
T ss_pred             hhhhccccceecceeecC--CCCEEeecCCcceEEeecchhcceeeee-ecccccceeEEeeeccCCCeEEEeccCcceE
Confidence            467899999999999974  6999999999999999998755443332 3589999999999998888999999999999


Q ss_pred             EEEEeecCCCC-------cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--
Q psy2762         139 SFLTYMSDTNS-------WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--  209 (318)
Q Consensus       139 ~i~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--  209 (318)
                      +++|+...+..       ........|...|..++-.|+.                -+.+-++++||+||=+|++...  
T Consensus       120 ~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~----------------PhtfwsasEDGtirQyDiREph~c  183 (758)
T KOG1310|consen  120 KLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNG----------------PHTFWSASEDGTIRQYDIREPHVC  183 (758)
T ss_pred             EEEecccccccccccCccchhhhhhhhhhhhhheecCCCC----------------CceEEEecCCcceeeecccCCccC
Confidence            99998532210       1112223577777777776652                2578999999999999987521  


Q ss_pred             -EEE-----EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         210 -WIE-----ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       210 -~~~-----~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                       +..     ...+...--..+|+..+|.   ...+|+.|+.|-..|+||..
T Consensus       184 ~p~~~~~~~l~ny~~~lielk~ltisp~---rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  184 NPDEDCPSILVNYNPQLIELKCLTISPS---RPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             CccccccHHHHHhchhhheeeeeeecCC---CCceEEecCCCchhhhhhhh
Confidence             000     0011111123578999997   67899999999999999954

>KOG4227|consensus

Probab=99.54  E-value=6.2e-13  Score=114.83  Aligned_cols=226  Identities=15%  Similarity=0.202  Sum_probs=153.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc---cCeEEEEecCCCCCcEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS---GPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~~~~~~~~~las~   86 (318)
                      .-|...|.+++|+...+.++||+.|++|.+-|++..           ..+.. ..|.   +.|+.+.. +|. .+.|++.
T Consensus       102 ~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~-----------qsi~V-~~~~~~~~~VY~m~~-~P~-DN~~~~~  167 (609)
T KOG4227|consen  102 HPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETK-----------QSIYV-ANENNNRGDVYHMDQ-HPT-DNTLIVV  167 (609)
T ss_pred             CccccceEEEEEccCCeeEecCCCcceeEeeecccc-----------eeeee-ecccCcccceeeccc-CCC-CceEEEE
Confidence            456789999999999999999999999999999732           22332 3344   58999997 454 6889999


Q ss_pred             ECCCeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-eecccccc---
Q psy2762          87 SYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-KIAAHTIG---  161 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~~~~h~~~---  161 (318)
                      +.++.|.+||+.... ....+-..........+.|+|.++ .++++.+.-+-+.+||.+......... ..++-+..   
T Consensus       168 t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P-~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~  246 (609)
T KOG4227|consen  168 TRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETP-ALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTE  246 (609)
T ss_pred             ecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCc-eeEEeccccCCCCceeeccccchHHhhhccccCcccchh
Confidence            999999999987653 222222333456678899999864 577788888888999986544211100 01111111   


Q ss_pred             cceeeeCCCCCCCcc--------------------------------ccccCCCCCCccceEEEecCCCeEEEEEccCC-
Q psy2762         162 CNAVSWGPGIGSLSE--------------------------------LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-  208 (318)
Q Consensus       162 v~~~~~~p~~~~~~~--------------------------------~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-  208 (318)
                      -+.+.|+|.+.++..                                ..+++..+-+ .+.+++||.+=.|+||.+-.. 
T Consensus       247 ~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~-D~~v~tGSD~~~i~~WklP~~~  325 (609)
T KOG4227|consen  247 WMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFID-DYTVATGSDHWGIHIWKLPRAN  325 (609)
T ss_pred             hhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeec-ceeeeccCcccceEEEecCCCc
Confidence            145566665432210                                0011111111 245899999999999975321 


Q ss_pred             ---------e---------E--EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         209 ---------K---------W--IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       209 ---------~---------~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                               .         .  .....+.||...++.|.|+|.    ..+|+|.+-.+.++||..-.
T Consensus       326 ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H----~~~l~SSGVE~~~KlWS~~r  388 (609)
T KOG4227|consen  326 DSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQH----NNLLVSSGVENSFKLWSDHR  388 (609)
T ss_pred             cccCccccCcchhhCchhheecceeEEEecccccccceeecCC----cceEeccchhhheecccccc
Confidence                     0         0  123567899999999999997    77899999999999996543

>KOG1354|consensus

Probab=99.52  E-value=2.8e-12  Score=109.20  Aligned_cols=259  Identities=17%  Similarity=0.216  Sum_probs=170.9

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------cCeEEEEecCCCC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------GPVWQVAWAHPQF   79 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~v~~~~~~~   79 (318)
                      --+.+.++.|+-+|.+|++|..+|.|-+|..+....      ...+...+++.|.            ..|..+.|-.+..
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~------~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n   97 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYK------GEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGN   97 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccc------cceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCC
Confidence            356889999999999999999999999997652210      0122334444453            3478889976666


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcE---------------------------------EEEEEe-cCCCcCeEEEEeeCCCC
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNW---------------------------------FKYYEY-NNHDSSVNSIAWAPKEF  125 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~---------------------------------~~~~~~-~~h~~~v~~v~~~p~~~  125 (318)
                      ...+....-|++|++|.+.....                                 .+...+ .+|+-.|++|+++.|. 
T Consensus        98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~-  176 (433)
T KOG1354|consen   98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDK-  176 (433)
T ss_pred             ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCcc-
Confidence            66777788899999998743110                                 111111 3578889999999983 


Q ss_pred             CcEEEEeecCCeEEEEEeecCCCCcceeeecccc-----cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeE
Q psy2762         126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-----IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLI  200 (318)
Q Consensus       126 ~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i  200 (318)
                       ..+.+ ..|=.|.+|.+.--+..+.+..++.+.     .-+++..|+|..                -..|+-.|..|+|
T Consensus       177 -Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~----------------cn~f~YSSSKGtI  238 (433)
T KOG1354|consen  177 -ETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHH----------------CNVFVYSSSKGTI  238 (433)
T ss_pred             -ceEee-ccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhH----------------ccEEEEecCCCcE
Confidence             44444 346678889876555555555555443     235677788852                2468888999999


Q ss_pred             EEEEccCCe-------EEEEEE-------cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         201 KIWKQEGDK-------WIEETK-------LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       201 ~iwd~~~~~-------~~~~~~-------~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      |+.|++...       +.+...       +..--..|.+|.|+++    |+++++-.. -+|+|||+.-... +....+.
T Consensus       239 rLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~s----GryilsRDy-ltvk~wD~nme~~-pv~t~~v  312 (433)
T KOG1354|consen  239 RLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHS----GRYILSRDY-LTVKLWDLNMEAK-PVETYPV  312 (433)
T ss_pred             EEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccC----CcEEEEecc-ceeEEEeccccCC-cceEEee
Confidence            999988421       000000       1122245889999995    888875432 6799999843321 1122222


Q ss_pred             cC------------C---cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         267 FD------------D---VVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       267 ~~------------~---~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |.            +   .-..++|+-++..+.+|+..+-.|+++...+.
T Consensus       313 h~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  313 HEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             hHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence            22            1   23578999999999999999999999955543

>KOG2394|consensus

Probab=99.51  E-value=6.2e-13  Score=118.91  Aligned_cols=190  Identities=18%  Similarity=0.300  Sum_probs=126.9

Q ss_pred             cceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      +..|++++|-|.+. +++..=.+|.+.+||.+                     +...++.-.|....++..|+..     
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~---------------------~~~~~t~p~~~~~k~~~~f~i~-----  272 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKE---------------------IVCGATAPSYQALKDGDQFAIL-----  272 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeecc---------------------ccccCCCCcccccCCCCeeEEe-----
Confidence            46788888866433 33334567888888753                     1122222233323344444332     


Q ss_pred             EEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          92 VIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                        .|.-... ..+..+.+  -.+.|+.++|+||  +.+||+.+.||.+||+++....   ..-.++..-.+..+|.||||
T Consensus       273 --t~ksk~~rNPv~~w~~--~~g~in~f~FS~D--G~~LA~VSqDGfLRvF~fdt~e---Llg~mkSYFGGLLCvcWSPD  343 (636)
T KOG2394|consen  273 --TSKSKKTRNPVARWHI--GEGSINEFAFSPD--GKYLATVSQDGFLRIFDFDTQE---LLGVMKSYFGGLLCVCWSPD  343 (636)
T ss_pred             --eeeccccCCccceeEe--ccccccceeEcCC--CceEEEEecCceEEEeeccHHH---HHHHHHhhccceEEEEEcCC
Confidence              2221111 22222322  3468999999998  8899999999999999984321   11122355677899999998


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEcc--------------------
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP--------------------  230 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp--------------------  230 (318)
                                       ++||++|++|--|.||-+..++.  .+.-.+|+.||..|+|.|                    
T Consensus       344 -----------------GKyIvtGGEDDLVtVwSf~erRV--VARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~  404 (636)
T KOG2394|consen  344 -----------------GKYIVTGGEDDLVTVWSFEERRV--VARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSD  404 (636)
T ss_pred             -----------------ccEEEecCCcceEEEEEeccceE--EEeccccccceeeEeecccccccccccccccccccccc
Confidence                             68999999999999999887754  345579999999999995                    


Q ss_pred             -----------CCCC-------------CccEEEEEeCCCeEEEEEcCCC
Q psy2762         231 -----------SWGL-------------SKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       231 -----------~~~~-------------~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                                 +++.             ....|.|+|.|..+.+||+...
T Consensus       405 ~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD  454 (636)
T KOG2394|consen  405 VAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTED  454 (636)
T ss_pred             hhcccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchh
Confidence                       1111             1257999999999999998764

>KOG2110|consensus

Probab=99.50  E-value=1.3e-10  Score=99.85  Aligned_cols=239  Identities=15%  Similarity=0.163  Sum_probs=155.9

Q ss_pred             CEEEEeeCCCc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762          26 LYLATCSSDHT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        26 ~~l~s~s~D~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~  103 (318)
                      .++|..+.+..  +++.+..+           +..+..+. ...+|-+|.++    -++|+.+=.+. |-|+|+..-+..
T Consensus        57 SLvaiV~~~qpr~Lkv~~~Kk-----------~~~ICe~~-fpt~IL~VrmN----r~RLvV~Lee~-IyIydI~~MklL  119 (391)
T KOG2110|consen   57 SLVAIVSIKQPRKLKVVHFKK-----------KTTICEIF-FPTSILAVRMN----RKRLVVCLEES-IYIYDIKDMKLL  119 (391)
T ss_pred             ceeEEEecCCCceEEEEEccc-----------CceEEEEe-cCCceEEEEEc----cceEEEEEccc-EEEEecccceee
Confidence            34554444433  77777652           23343332 46778889885    35677766655 999999987654


Q ss_pred             EEEEec-CCCcCeEEEEeeCCCCCcEEEEe--ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcccccc
Q psy2762         104 KYYEYN-NHDSSVNSIAWAPKEFGLILACG--SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK  180 (318)
Q Consensus       104 ~~~~~~-~h~~~v~~v~~~p~~~~~~lasg--s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~  180 (318)
                      .+.... .+...+.++++++.  +.++|-=  ...|.|.+||..+-.   ....+..|..++.+++|+|+          
T Consensus       120 hTI~t~~~n~~gl~AlS~n~~--n~ylAyp~s~t~GdV~l~d~~nl~---~v~~I~aH~~~lAalafs~~----------  184 (391)
T KOG2110|consen  120 HTIETTPPNPKGLCALSPNNA--NCYLAYPGSTTSGDVVLFDTINLQ---PVNTINAHKGPLAALAFSPD----------  184 (391)
T ss_pred             hhhhccCCCccceEeeccCCC--CceEEecCCCCCceEEEEEcccce---eeeEEEecCCceeEEEECCC----------
Confidence            433222 23344555555543  5555532  235789999975432   34566799999999999997          


Q ss_pred             CCCCCCccceEEEecCCCe-EEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce
Q psy2762         181 GSKLGGVAKRLVSGGCDNL-IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW  259 (318)
Q Consensus       181 ~~~~~~~~~~lasgs~d~~-i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~  259 (318)
                             |..|||+|+.|+ ||||...+++....+..---...|++|+|+|+    +.+|++.|.-++|.|+.++.....
T Consensus       185 -------G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d----s~~L~~sS~TeTVHiFKL~~~~~~  253 (391)
T KOG2110|consen  185 -------GTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD----SQFLAASSNTETVHIFKLEKVSNN  253 (391)
T ss_pred             -------CCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC----CCeEEEecCCCeEEEEEecccccC
Confidence                   689999999998 89999988865433332112345899999996    789999999999999987663200


Q ss_pred             ee----------------------EEe----------e----ecCCcEEEEEEc--CCCCEEEEEeCCCeEEEEEECC--
Q psy2762         260 TP----------------------FIM----------N----TFDDVVWNVSWS--LTGDILTVSCGDNSVSLWKENT--  299 (318)
Q Consensus       260 ~~----------------------~~~----------~----~~~~~v~~v~~s--pdg~~l~s~~~D~~v~iW~~~~--  299 (318)
                      .+                      ...          .    ...+.-..+++.  +..+.+..++.||.+..+.++.  
T Consensus       254 ~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~  333 (391)
T KOG2110|consen  254 PPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKE  333 (391)
T ss_pred             CCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCC
Confidence            00                      000          0    001112445555  4678888999999999999876  


Q ss_pred             CCceEEEe
Q psy2762         300 DGAWQCIT  307 (318)
Q Consensus       300 ~~~~~~~~  307 (318)
                      +|+-..++
T Consensus       334 gGec~lik  341 (391)
T KOG2110|consen  334 GGECALIK  341 (391)
T ss_pred             CceeEEEE
Confidence            56555554

>KOG2394|consensus

Probab=99.50  E-value=7e-13  Score=118.56  Aligned_cols=117  Identities=17%  Similarity=0.247  Sum_probs=91.0

Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      .+++..+|+|+                 +++||+.|+||.+||||+.+.++.  ..++.=-+...||+||||    |++|
T Consensus       291 g~in~f~FS~D-----------------G~~LA~VSqDGfLRvF~fdt~eLl--g~mkSYFGGLLCvcWSPD----GKyI  347 (636)
T KOG2394|consen  291 GSINEFAFSPD-----------------GKYLATVSQDGFLRIFDFDTQELL--GVMKSYFGGLLCVCWSPD----GKYI  347 (636)
T ss_pred             ccccceeEcCC-----------------CceEEEEecCceEEEeeccHHHHH--HHHHhhccceEEEEEcCC----ccEE
Confidence            46777788886                 689999999999999998875431  222222234789999996    9999


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-------------------------------C---------
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-------------------------------T---------  279 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-------------------------------d---------  279 (318)
                      ++|++|.-|.||.+.+.+  ....-.+|..+|..|+|.|                               +         
T Consensus       348 vtGGEDDLVtVwSf~erR--VVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s  425 (636)
T KOG2394|consen  348 VTGGEDDLVTVWSFEERR--VVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLS  425 (636)
T ss_pred             EecCCcceEEEEEeccce--EEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCccc
Confidence            999999999999987743  3445678999999999983                               1         


Q ss_pred             --------CCEEEEEeCCCeEEEEEECCCC
Q psy2762         280 --------GDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       280 --------g~~l~s~~~D~~v~iW~~~~~~  301 (318)
                              ...+.|++.|..+.+||+..+=
T Consensus       426 ~~~~~~~v~YRfGSVGqDTqlcLWDlteD~  455 (636)
T KOG2394|consen  426 SFNRINSVTYRFGSVGQDTQLCLWDLTEDV  455 (636)
T ss_pred             ccccccceEEEeecccccceEEEEecchhh
Confidence                    1247889999999999987653

>KOG0974|consensus

Probab=99.49  E-value=2.2e-12  Score=123.25  Aligned_cols=198  Identities=16%  Similarity=0.217  Sum_probs=147.2

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcC-----eEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS-----VNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~-----v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      .++|....+.  .+.+.++.+..+..+.+||...+..  ..++. +...     ..-+.++++  ..++++|+.-+.|.+
T Consensus        87 s~wi~g~~l~--~e~k~i~l~~~~ns~~i~d~~~~~~--~~~i~-~~er~~l~~~~~~g~s~~--~~~i~~gsv~~~iiv  159 (967)
T KOG0974|consen   87 SDWIFGAKLF--EENKKIALVTSRNSLLIRDSKNSSV--LSKIQ-SDERCTLYSSLIIGDSAE--ELYIASGSVFGEIIV  159 (967)
T ss_pred             cccccccchh--hhcceEEEEEcCceEEEEecccCce--ehhcC-CCceEEEEeEEEEeccCc--EEEEEeccccccEEE
Confidence            3444443332  3478899999999999999876532  11111 2221     122334554  678999999999999


Q ss_pred             EEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762         141 LTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      |++..++.   ...+.+|.+.+.++.|+-+                 +.++++.|+|+++|+|++++.+.. ..+..+|+
T Consensus       160 W~~~~dn~---p~~l~GHeG~iF~i~~s~d-----------------g~~i~s~SdDRsiRlW~i~s~~~~-~~~~fgHs  218 (967)
T KOG0974|consen  160 WKPHEDNK---PIRLKGHEGSIFSIVTSLD-----------------GRYIASVSDDRSIRLWPIDSREVL-GCTGFGHS  218 (967)
T ss_pred             EeccccCC---cceecccCCceEEEEEccC-----------------CcEEEEEecCcceeeeeccccccc-Cccccccc
Confidence            99863332   2367899999999999876                 579999999999999999987643 24567999


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ..|..++|.|.      .|+|++.|.+.++|+.....   ......|. .-+|.++..++...+.+++.|+++++|+...
T Consensus       219 aRvw~~~~~~n------~i~t~gedctcrvW~~~~~~---l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  219 ARVWACCFLPN------RIITVGEDCTCRVWGVNGTQ---LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             ceeEEEEeccc------eeEEeccceEEEEEecccce---ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            99999999983      79999999999999655422   12233333 5799999999999999999999999999765


Q ss_pred             C
Q psy2762         300 D  300 (318)
Q Consensus       300 ~  300 (318)
                      .
T Consensus       290 r  290 (967)
T KOG0974|consen  290 R  290 (967)
T ss_pred             c
Confidence            3

>KOG2111|consensus

Probab=99.47  E-value=2.1e-10  Score=96.92  Aligned_cols=222  Identities=15%  Similarity=0.223  Sum_probs=143.9

Q ss_pred             CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC-cEEEEEEecC-CC
Q psy2762          35 HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-NWFKYYEYNN-HD  112 (318)
Q Consensus        35 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~-~~~~~~~~~~-h~  112 (318)
                      ++|.|||-.           ...++.++. ...+|.+|.+.+    ++++.. ....|.||..... +......... ++
T Consensus        75 NkviIWDD~-----------k~~~i~el~-f~~~I~~V~l~r----~riVvv-l~~~I~VytF~~n~k~l~~~et~~NPk  137 (346)
T KOG2111|consen   75 NKVIIWDDL-----------KERCIIELS-FNSEIKAVKLRR----DRIVVV-LENKIYVYTFPDNPKLLHVIETRSNPK  137 (346)
T ss_pred             ceEEEEecc-----------cCcEEEEEE-eccceeeEEEcC----CeEEEE-ecCeEEEEEcCCChhheeeeecccCCC
Confidence            579999943           234566654 578999999863    455554 4789999987643 2222222221 22


Q ss_pred             cCeEEEEeeCCCCCcEEEE-eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceE
Q psy2762         113 SSVNSIAWAPKEFGLILAC-GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL  191 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~las-gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  191 (318)
                      + .  ++..|.....+||. |-.-|+|.|-++...... ....+.+|...+.+++.+-.                 |..+
T Consensus       138 G-l--C~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~-----------------Gt~v  196 (346)
T KOG2111|consen  138 G-L--CSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN-APSIINAHDSDIACVALNLQ-----------------GTLV  196 (346)
T ss_pred             c-e--EeecCCCCceEEEcCCCccceEEEEEhhhcCcC-CceEEEcccCceeEEEEcCC-----------------ccEE
Confidence            2 2  33445433344443 445688999887544321 23456799999999988764                 5789


Q ss_pred             EEecCCCe-EEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc------------
Q psy2762         192 VSGGCDNL-IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------  258 (318)
Q Consensus       192 asgs~d~~-i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~------------  258 (318)
                      ||+|..|+ |||||..+++..+...--.....|++++|||+    ..+||.+|+-|++.|+.+.....            
T Consensus       197 ATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~----~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~  272 (346)
T KOG2111|consen  197 ATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPN----SSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKR  272 (346)
T ss_pred             EEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCC----ccEEEEEcCCCeEEEEEeecCCCCccccccccccc
Confidence            99999998 89999999876655543334566999999996    88999999999999998776321            


Q ss_pred             ----------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         259 ----------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       259 ----------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                                |......-.++...-++|..+-+.++..+.||+-+=...+
T Consensus       273 ~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f~  322 (346)
T KOG2111|consen  273 LVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKFD  322 (346)
T ss_pred             cccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEec
Confidence                      0000011112345566777665566666677765544433

>KOG1272|consensus

Probab=99.47  E-value=3.8e-13  Score=118.32  Aligned_cols=231  Identities=17%  Similarity=0.246  Sum_probs=160.9

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .-+.+.++.+|++|+.|+.-|.|..+|..           ++.+...+. -...|..+.|-|.  .++||. .....+.|
T Consensus       131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~-----------t~~L~~Ei~-v~Etv~Dv~~LHn--eq~~AV-AQK~y~yv  195 (545)
T KOG1272|consen  131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWV-----------TKKLHFEIN-VMETVRDVTFLHN--EQFFAV-AQKKYVYV  195 (545)
T ss_pred             CCeeeeecCCccEEEecCCccceeeeecc-----------cceeeeeee-hhhhhhhhhhhcc--hHHHHh-hhhceEEE
Confidence            45678999999999999999999999985           345554443 2556888999753  455554 57889999


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL  174 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~  174 (318)
                      ||-...+.=|   +.. ...|..+.|-|.  ..+|++++..|.+..-|+..+.-   +..+..-.+.+..+.        
T Consensus       196 YD~~GtElHC---lk~-~~~v~rLeFLPy--HfLL~~~~~~G~L~Y~DVS~Gkl---Va~~~t~~G~~~vm~--------  258 (545)
T KOG1272|consen  196 YDNNGTELHC---LKR-HIRVARLEFLPY--HFLLVAASEAGFLKYQDVSTGKL---VASIRTGAGRTDVMK--------  258 (545)
T ss_pred             ecCCCcEEee---hhh-cCchhhhcccch--hheeeecccCCceEEEeechhhh---hHHHHccCCccchhh--------
Confidence            9965433222   222 356889999998  56899999999998888755431   111111111111111        


Q ss_pred             ccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       175 ~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                            .++.+   ..+-+|..+|+|.+|.....+  ++..+-.|.++|.+|++.|+    |.|+||.|.|+.++|||+.
T Consensus       259 ------qNP~N---aVih~GhsnGtVSlWSP~ske--PLvKiLcH~g~V~siAv~~~----G~YMaTtG~Dr~~kIWDlR  323 (545)
T KOG1272|consen  259 ------QNPYN---AVIHLGHSNGTVSLWSPNSKE--PLVKILCHRGPVSSIAVDRG----GRYMATTGLDRKVKIWDLR  323 (545)
T ss_pred             ------cCCcc---ceEEEcCCCceEEecCCCCcc--hHHHHHhcCCCcceEEECCC----CcEEeecccccceeEeeec
Confidence                  22222   368899999999999876654  45667789999999999996    9999999999999999998


Q ss_pred             CCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         255 DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       255 ~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ...  ++..... .-+...++||..| +||.+ ...-|.||.-
T Consensus       324 ~~~--ql~t~~t-p~~a~~ls~Sqkg-lLA~~-~G~~v~iw~d  361 (545)
T KOG1272|consen  324 NFY--QLHTYRT-PHPASNLSLSQKG-LLALS-YGDHVQIWKD  361 (545)
T ss_pred             ccc--ccceeec-CCCcccccccccc-ceeee-cCCeeeeehh
Confidence            743  1211111 2457789999555 55544 4458999973

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=7.7e-11  Score=109.63  Aligned_cols=219  Identities=14%  Similarity=0.166  Sum_probs=135.6

Q ss_pred             CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC---CCeEEEEeCCCCcEEEEEEecCC
Q psy2762          35 HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY---DRKVIIWRGDNGNWFKYYEYNNH  111 (318)
Q Consensus        35 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~---Dg~v~vWd~~~~~~~~~~~~~~h  111 (318)
                      ..|.++|.+            +.....+..|...+.+.+|++  +|+.|+..+.   +..|.+||+.+++...   +..+
T Consensus       182 ~~l~~~d~d------------g~~~~~lt~~~~~v~~p~wSp--DG~~lay~s~~~g~~~i~~~dl~~g~~~~---l~~~  244 (435)
T PRK05137        182 KRLAIMDQD------------GANVRYLTDGSSLVLTPRFSP--NRQEITYMSYANGRPRVYLLDLETGQREL---VGNF  244 (435)
T ss_pred             eEEEEECCC------------CCCcEEEecCCCCeEeeEECC--CCCEEEEEEecCCCCEEEEEECCCCcEEE---eecC
Confidence            367777764            223455667888999999974  5888888775   4689999998876433   3345


Q ss_pred             CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceE
Q psy2762         112 DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL  191 (318)
Q Consensus       112 ~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  191 (318)
                      .+.+...+|+|++ ..++.+.+.++...||-+.....  ....+..+........|+|+                 +++|
T Consensus       245 ~g~~~~~~~SPDG-~~la~~~~~~g~~~Iy~~d~~~~--~~~~Lt~~~~~~~~~~~spD-----------------G~~i  304 (435)
T PRK05137        245 PGMTFAPRFSPDG-RKVVMSLSQGGNTDIYTMDLRSG--TTTRLTDSPAIDTSPSYSPD-----------------GSQI  304 (435)
T ss_pred             CCcccCcEECCCC-CEEEEEEecCCCceEEEEECCCC--ceEEccCCCCccCceeEcCC-----------------CCEE
Confidence            5667789999994 23445666666644443322221  23445445545567889997                 4556


Q ss_pred             EEecC-CC--eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEee
Q psy2762         192 VSGGC-DN--LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMN  265 (318)
Q Consensus       192 asgs~-d~--~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~  265 (318)
                      +..+. ++  .|+++|+.+++..+.   ..+...+....|+|+    |..|+..+.+   ..|.+|++.+...   ..+.
T Consensus       305 ~f~s~~~g~~~Iy~~d~~g~~~~~l---t~~~~~~~~~~~Spd----G~~ia~~~~~~~~~~i~~~d~~~~~~---~~lt  374 (435)
T PRK05137        305 VFESDRSGSPQLYVMNADGSNPRRI---SFGGGRYSTPVWSPR----GDLIAFTKQGGGQFSIGVMKPDGSGE---RILT  374 (435)
T ss_pred             EEEECCCCCCeEEEEECCCCCeEEe---ecCCCcccCeEECCC----CCEEEEEEcCCCceEEEEEECCCCce---Eecc
Confidence            65543 33  577778776654322   223344667889996    7777776654   3578888754321   1221


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEeCCC-e---EEEEEECCCC
Q psy2762         266 TFDDVVWNVSWSLTGDILTVSCGDN-S---VSLWKENTDG  301 (318)
Q Consensus       266 ~~~~~v~~v~~spdg~~l~s~~~D~-~---v~iW~~~~~~  301 (318)
                       ....+.+.+|+|||+.|+..+.++ .   .+||-++..|
T Consensus       375 -~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g  413 (435)
T PRK05137        375 -SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTG  413 (435)
T ss_pred             -CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCC
Confidence             122467889999999988766532 1   3455554433

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=5.4e-11  Score=110.27  Aligned_cols=219  Identities=15%  Similarity=0.090  Sum_probs=137.0

Q ss_pred             CCcceeeeeeecCCCCEEEEee---CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE-
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCS---SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC-   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s---~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~-   86 (318)
                      .+.+.+...+|+|||++|+..+   .+..|.+|++..+         ....+..+.+|   +....|++  ||+.|+.. 
T Consensus       196 ~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G---------~~~~l~~~~~~---~~~~~~SP--DG~~La~~~  261 (429)
T PRK03629        196 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---------AVRQVASFPRH---NGAPAFSP--DGSKLAFAL  261 (429)
T ss_pred             cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCC---------CeEEccCCCCC---cCCeEECC--CCCEEEEEE
Confidence            4566888999999999988654   2456888888632         11233334444   44678974  58877754 


Q ss_pred             ECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          87 SYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        87 s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      +.++  .|.+||+.++...+   +..+...+...+|+|+  +..++..+. ++...+|.......  ....+..+.....
T Consensus       262 ~~~g~~~I~~~d~~tg~~~~---lt~~~~~~~~~~wSPD--G~~I~f~s~~~g~~~Iy~~d~~~g--~~~~lt~~~~~~~  334 (429)
T PRK03629        262 SKTGSLNLYVMDLASGQIRQ---VTDGRSNNTEPTWFPD--SQNLAYTSDQAGRPQVYKVNINGG--APQRITWEGSQNQ  334 (429)
T ss_pred             cCCCCcEEEEEECCCCCEEE---ccCCCCCcCceEECCC--CCEEEEEeCCCCCceEEEEECCCC--CeEEeecCCCCcc
Confidence            4455  48888988775433   3334456788999999  555555554 45556665433322  2233333333445


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ...|+|+                 +++|+..+.+   ..|.+||+.+++.....  ..+  ......|+|+    |.+|+
T Consensus       335 ~~~~SpD-----------------G~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt--~~~--~~~~p~~SpD----G~~i~  389 (429)
T PRK03629        335 DADVSSD-----------------GKFMVMVSSNGGQQHIAKQDLATGGVQVLT--DTF--LDETPSIAPN----GTMVI  389 (429)
T ss_pred             CEEECCC-----------------CCEEEEEEccCCCceEEEEECCCCCeEEeC--CCC--CCCCceECCC----CCEEE
Confidence            6788997                 4566655433   35888898877543222  111  2346789996    88888


Q ss_pred             EEeCCCe---EEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         241 SCSQDRK---VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       241 s~s~D~~---i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      .++.|+.   +.++++.+..   ...+..+...+...+|+|
T Consensus       390 ~~s~~~~~~~l~~~~~~G~~---~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        390 YSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSP  427 (429)
T ss_pred             EEEcCCCceEEEEEECCCCC---eEECccCCCCcCCcccCC
Confidence            8888765   6677775533   344556777788899987

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.43  E-value=2.3e-11  Score=100.29  Aligned_cols=110  Identities=15%  Similarity=0.335  Sum_probs=80.5

Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceE--EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL--VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l--asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      ..+|.+++|+|+.                 ..|  +.|..++.|.|||.+..   ....+  +...++.|.|||+    |
T Consensus        59 ~~~I~~~~WsP~g-----------------~~favi~g~~~~~v~lyd~~~~---~i~~~--~~~~~n~i~wsP~----G  112 (194)
T PF08662_consen   59 EGPIHDVAWSPNG-----------------NEFAVIYGSMPAKVTLYDVKGK---KIFSF--GTQPRNTISWSPD----G  112 (194)
T ss_pred             CCceEEEEECcCC-----------------CEEEEEEccCCcccEEEcCccc---EeEee--cCCCceEEEECCC----C
Confidence            4469999999973                 343  44567789999999733   23444  3456889999996    8


Q ss_pred             cEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC------CCeEEEEEEC
Q psy2762         237 CMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG------DNSVSLWKEN  298 (318)
Q Consensus       237 ~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~------D~~v~iW~~~  298 (318)
                      ++|++++.+   |.|.+||..+..   ......+ ..+..++|||||++|+++..      |+.++||+..
T Consensus       113 ~~l~~~g~~n~~G~l~~wd~~~~~---~i~~~~~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  113 RFLVLAGFGNLNGDLEFWDVRKKK---KISTFEH-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             CEEEEEEccCCCcEEEEEECCCCE---Eeecccc-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec
Confidence            899998754   669999998532   1111222 34679999999999999874      8899999863

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=1.2e-10  Score=107.96  Aligned_cols=210  Identities=16%  Similarity=0.170  Sum_probs=132.0

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECC---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYD---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~D---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ...+..+...+.+.+|++  +|+.|+..+.+   ..|.+||+.+++.....   ...+.+.+.+|+|++ ..++.+.+.+
T Consensus       188 ~~~l~~~~~~v~~p~wSP--DG~~la~~s~~~~~~~I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG-~~la~~~~~~  261 (427)
T PRK02889        188 AQSALSSPEPIISPAWSP--DGTKLAYVSFESKKPVVYVHDLATGRRRVVA---NFKGSNSAPAWSPDG-RTLAVALSRD  261 (427)
T ss_pred             ceEeccCCCCcccceEcC--CCCEEEEEEccCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCC-CEEEEEEccC
Confidence            344556788899999974  58888887754   35999999887644332   233456688999994 2344466778


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEc--cCCeEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQ--EGDKWIE  212 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~--~~~~~~~  212 (318)
                      +...||.+.....  ....+..+........|+|+                 +++|+..+ .++...||.+  .+++.. 
T Consensus       262 g~~~Iy~~d~~~~--~~~~lt~~~~~~~~~~wSpD-----------------G~~l~f~s~~~g~~~Iy~~~~~~g~~~-  321 (427)
T PRK02889        262 GNSQIYTVNADGS--GLRRLTQSSGIDTEPFFSPD-----------------GRSIYFTSDRGGAPQIYRMPASGGAAQ-  321 (427)
T ss_pred             CCceEEEEECCCC--CcEECCCCCCCCcCeEEcCC-----------------CCEEEEEecCCCCcEEEEEECCCCceE-
Confidence            8878887643322  23344444444566789997                 45566444 3466777764  344322 


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC---eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR---KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      ...+.+  .......|||+    |++|+..+.++   .|.+|++.+...   ..+.. .....+.+|+|||+.|+.++.+
T Consensus       322 ~lt~~g--~~~~~~~~SpD----G~~Ia~~s~~~g~~~I~v~d~~~g~~---~~lt~-~~~~~~p~~spdg~~l~~~~~~  391 (427)
T PRK02889        322 RVTFTG--SYNTSPRISPD----GKLLAYISRVGGAFKLYVQDLATGQV---TALTD-TTRDESPSFAPNGRYILYATQQ  391 (427)
T ss_pred             EEecCC--CCcCceEECCC----CCEEEEEEccCCcEEEEEEECCCCCe---EEccC-CCCccCceECCCCCEEEEEEec
Confidence            222333  23346789996    77888777654   699999876432   22221 2234678999999998888754


Q ss_pred             C-eEEEEEECCCCceE
Q psy2762         290 N-SVSLWKENTDGAWQ  304 (318)
Q Consensus       290 ~-~v~iW~~~~~~~~~  304 (318)
                      + .-.++-++..|...
T Consensus       392 ~g~~~l~~~~~~g~~~  407 (427)
T PRK02889        392 GGRSVLAAVSSDGRIK  407 (427)
T ss_pred             CCCEEEEEEECCCCce
Confidence            4 44466555555433

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=2.6e-10  Score=105.78  Aligned_cols=211  Identities=14%  Similarity=0.167  Sum_probs=130.4

Q ss_pred             cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC---CCeEEEEeCCCCcEEEEEEecCCC
Q psy2762          36 TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY---DRKVIIWRGDNGNWFKYYEYNNHD  112 (318)
Q Consensus        36 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~---Dg~v~vWd~~~~~~~~~~~~~~h~  112 (318)
                      .|.+||.+..            ....+..+...+.+.+|++  +|+.|+..+.   +..+.+|++.+++...+..+.   
T Consensus       180 ~l~~~d~dg~------------~~~~lt~~~~~~~~p~wSP--DG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~---  242 (429)
T PRK03629        180 ELRVSDYDGY------------NQFVVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVRQVASFP---  242 (429)
T ss_pred             eEEEEcCCCC------------CCEEeecCCCceeeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCCeEEccCCC---
Confidence            6777877521            1233445677899999984  5888887653   357889999877644433333   


Q ss_pred             cCeEEEEeeCCCCCcEEE-EeecCC--eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         113 SSVNSIAWAPKEFGLILA-CGSSDG--TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~la-sgs~d~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      ..+..++|+|+  +..++ +.+.++  .|.+||...+    ....+..+...+....|+|+                 ++
T Consensus       243 ~~~~~~~~SPD--G~~La~~~~~~g~~~I~~~d~~tg----~~~~lt~~~~~~~~~~wSPD-----------------G~  299 (429)
T PRK03629        243 RHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASG----QIRQVTDGRSNNTEPTWFPD-----------------SQ  299 (429)
T ss_pred             CCcCCeEECCC--CCEEEEEEcCCCCcEEEEEECCCC----CEEEccCCCCCcCceEECCC-----------------CC
Confidence            33456899999  54454 334455  4666775332    23344444445678899997                 45


Q ss_pred             eEEEecC-CCeEEEE--EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEE
Q psy2762         190 RLVSGGC-DNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFI  263 (318)
Q Consensus       190 ~lasgs~-d~~i~iw--d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~  263 (318)
                      .|+..+. ++..+||  |+.+++..+   +..+........|+|+    |.+|+..+.+   ..|.+|++.+...   ..
T Consensus       300 ~I~f~s~~~g~~~Iy~~d~~~g~~~~---lt~~~~~~~~~~~SpD----G~~Ia~~~~~~g~~~I~~~dl~~g~~---~~  369 (429)
T PRK03629        300 NLAYTSDQAGRPQVYKVNINGGAPQR---ITWEGSQNQDADVSSD----GKFMVMVSSNGGQQHIAKQDLATGGV---QV  369 (429)
T ss_pred             EEEEEeCCCCCceEEEEECCCCCeEE---eecCCCCccCEEECCC----CCEEEEEEccCCCceEEEEECCCCCe---EE
Confidence            6665554 3455555  555554322   2223334567899996    7777776543   3588888876431   22


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCCCe---EEEEEE
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGDNS---VSLWKE  297 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~---v~iW~~  297 (318)
                      +.. .....+.+|+|||++|+.++.++.   +.++++
T Consensus       370 Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~  405 (429)
T PRK03629        370 LTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST  405 (429)
T ss_pred             eCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC
Confidence            221 112346889999999999998774   555554

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=9.5e-11  Score=108.90  Aligned_cols=217  Identities=14%  Similarity=0.142  Sum_probs=133.3

Q ss_pred             CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC---CeEEEEeCCCCcEEEEEEecCC
Q psy2762          35 HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD---RKVIIWRGDNGNWFKYYEYNNH  111 (318)
Q Consensus        35 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D---g~v~vWd~~~~~~~~~~~~~~h  111 (318)
                      ..|.+||.+.            .....+..|...+.+.+|++  +|+.|+..+.+   ..|.+||+.+++.....   ..
T Consensus       184 ~~l~i~D~~g------------~~~~~lt~~~~~v~~p~wSp--Dg~~la~~s~~~~~~~l~~~dl~~g~~~~l~---~~  246 (433)
T PRK04922        184 YALQVADSDG------------YNPQTILRSAEPILSPAWSP--DGKKLAYVSFERGRSAIYVQDLATGQRELVA---SF  246 (433)
T ss_pred             EEEEEECCCC------------CCceEeecCCCccccccCCC--CCCEEEEEecCCCCcEEEEEECCCCCEEEec---cC
Confidence            3588888752            12344556778899999974  58889988754   36999999877643332   23


Q ss_pred             CcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         112 DSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       112 ~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      .+...+++|+|++ ..++.+.+.++  .|.+|+...+    ....+..+.......+|+|+                 ++
T Consensus       247 ~g~~~~~~~SpDG-~~l~~~~s~~g~~~Iy~~d~~~g----~~~~lt~~~~~~~~~~~spD-----------------G~  304 (433)
T PRK04922        247 RGINGAPSFSPDG-RRLALTLSRDGNPEIYVMDLGSR----QLTRLTNHFGIDTEPTWAPD-----------------GK  304 (433)
T ss_pred             CCCccCceECCCC-CEEEEEEeCCCCceEEEEECCCC----CeEECccCCCCccceEECCC-----------------CC
Confidence            3445578999984 23444555555  4777776332    23444445444567889997                 45


Q ss_pred             eEEEec-CCCe--EEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC---eEEEEEcCCCcceeeEE
Q psy2762         190 RLVSGG-CDNL--IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR---KVIIWTSNDYVTWTPFI  263 (318)
Q Consensus       190 ~lasgs-~d~~--i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~---~i~vw~~~~~~~~~~~~  263 (318)
                      +|+..+ .++.  |.++++.+++... .++.+  .....++|+|+    |.+|+..+.++   .|.+|++.+..   ...
T Consensus       305 ~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g--~~~~~~~~SpD----G~~Ia~~~~~~~~~~I~v~d~~~g~---~~~  374 (433)
T PRK04922        305 SIYFTSDRGGRPQIYRVAASGGSAER-LTFQG--NYNARASVSPD----GKKIAMVHGSGGQYRIAVMDLSTGS---VRT  374 (433)
T ss_pred             EEEEEECCCCCceEEEEECCCCCeEE-eecCC--CCccCEEECCC----CCEEEEEECCCCceeEEEEECCCCC---eEE
Confidence            666555 4444  5555666654322 22222  33457899996    67777665433   68999986643   222


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCC-CeEEEEEECCCC
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGD-NSVSLWKENTDG  301 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D-~~v~iW~~~~~~  301 (318)
                      +. +.....+.+|+|||++|+.++.+ +.-+||-++..|
T Consensus       375 Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g  412 (433)
T PRK04922        375 LT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG  412 (433)
T ss_pred             CC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence            32 22245578999999998777653 444555555544

>KOG2321|consensus

Probab=99.41  E-value=4.8e-11  Score=107.80  Aligned_cols=257  Identities=14%  Similarity=0.202  Sum_probs=163.1

Q ss_pred             CCCcceeeeeeecCCCCEEE-EeeCCCcEEEEEcCCC---cCCC------------CCCCCcceE---EEEecccccC--
Q psy2762          10 TGHEDMIHDAEMDYLGLYLA-TCSSDHTVKVFNLDRN---LKKD------------DSHSQKGTL---IAELKGHSGP--   68 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~-s~s~D~~v~vwd~~~~---~~~~------------~~~~~~~~~---~~~~~~h~~~--   68 (318)
                      -+|++.-+.+.++|||+||+ ||-+--.|++||+..-   ++.+            ++.++ -..   -+++.-|...  
T Consensus        48 fe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK-~v~L~~DR~IefHak~G~  126 (703)
T KOG2321|consen   48 FEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSK-SVFLQNDRTIEFHAKYGR  126 (703)
T ss_pred             cCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhh-heEeecCceeeehhhcCe
Confidence            46888889999999999955 5667888999998621   1111            11111 000   1222223211  


Q ss_pred             ---------eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          69 ---------VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        69 ---------V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                               -..+.+..+ ...+++.| ....|-=.+++.+++...+..  ..+.+++|..++-  ..++++|+.+|.|-
T Consensus       127 hy~~RIP~~GRDm~y~~~-scDly~~g-sg~evYRlNLEqGrfL~P~~~--~~~~lN~v~in~~--hgLla~Gt~~g~VE  200 (703)
T KOG2321|consen  127 HYRTRIPKFGRDMKYHKP-SCDLYLVG-SGSEVYRLNLEQGRFLNPFET--DSGELNVVSINEE--HGLLACGTEDGVVE  200 (703)
T ss_pred             eeeeecCcCCccccccCC-CccEEEee-cCcceEEEEcccccccccccc--ccccceeeeecCc--cceEEecccCceEE
Confidence                     222333322 24444444 445565568888887665543  3578999999997  56899999999999


Q ss_pred             EEEeecCCCCcce---eeecccccc-----cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         140 FLTYMSDTNSWES---RKIAAHTIG-----CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       140 i~~~~~~~~~~~~---~~~~~h~~~-----v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      +||.+.......+   ..+..|...     |+++.|+.+                 +-.+++|..+|.|.|||++..++.
T Consensus       201 fwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~-----------------gL~~aVGts~G~v~iyDLRa~~pl  263 (703)
T KOG2321|consen  201 FWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDD-----------------GLHVAVGTSTGSVLIYDLRASKPL  263 (703)
T ss_pred             EecchhhhhheeeecccccCCCccccccCcceEEEecCC-----------------ceeEEeeccCCcEEEEEcccCCce
Confidence            9998654321111   011123332     667777654                 457999999999999999987653


Q ss_pred             EEEEcccCC--CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         212 EETKLENHS--DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       212 ~~~~~~~h~--~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      .   ...|.  -+|..+.|.+..  ....++|. ....++||+-.++...   .....+..++.+.+-|++-++.+|-++
T Consensus       264 ~---~kdh~~e~pi~~l~~~~~~--~q~~v~S~-Dk~~~kiWd~~~Gk~~---asiEpt~~lND~C~~p~sGm~f~Ane~  334 (703)
T KOG2321|consen  264 L---VKDHGYELPIKKLDWQDTD--QQNKVVSM-DKRILKIWDECTGKPM---ASIEPTSDLNDFCFVPGSGMFFTANES  334 (703)
T ss_pred             e---ecccCCccceeeecccccC--CCceEEec-chHHhhhcccccCCce---eeccccCCcCceeeecCCceEEEecCC
Confidence            2   23454  468899998851  12334433 5577999998775421   111234459999999999999999988


Q ss_pred             CeEEEEEECC
Q psy2762         290 NSVSLWKENT  299 (318)
Q Consensus       290 ~~v~iW~~~~  299 (318)
                      ..+..+-+-.
T Consensus       335 ~~m~~yyiP~  344 (703)
T KOG2321|consen  335 SKMHTYYIPS  344 (703)
T ss_pred             CcceeEEccc
Confidence            8777765544

>KOG4497|consensus

Probab=99.41  E-value=3.4e-12  Score=108.11  Aligned_cols=231  Identities=16%  Similarity=0.238  Sum_probs=145.2

Q ss_pred             eeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-----ccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          18 DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-----SGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      -+.|||+|+|+|+++.- .+-|=|.+                 +++-|     -+.|.-+.|..+ ....|....-|+.|
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~-----------------tlq~~qlf~cldki~yieW~ad-s~~ilC~~yk~~~v   73 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSE-----------------TLQLHQLFLCLDKIVYIEWKAD-SCHILCVAYKDPKV   73 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccc-----------------hhhHHHHHHHHHHhhheeeecc-ceeeeeeeeccceE
Confidence            47899999999999865 55555543                 22222     356777888753 35566777778899


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc-cccceeeeCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-IGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~  171 (318)
                      .+|++...++-+.  ++.....+.++.|+|+++ +++.+...|-.|.+|.+.+.+     .....|. .++..++|+|+ 
T Consensus        74 qvwsl~Qpew~ck--Ideg~agls~~~WSPdgr-hiL~tseF~lriTVWSL~t~~-----~~~~~~pK~~~kg~~f~~d-  144 (447)
T KOG4497|consen   74 QVWSLVQPEWYCK--IDEGQAGLSSISWSPDGR-HILLTSEFDLRITVWSLNTQK-----GYLLPHPKTNVKGYAFHPD-  144 (447)
T ss_pred             EEEEeecceeEEE--eccCCCcceeeeECCCcc-eEeeeecceeEEEEEEeccce-----eEEecccccCceeEEECCC-
Confidence            9999988777653  445577899999999953 678888999999999874332     1222232 34567889987 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                      +++.|..+.--.....++. -..++....+.-.+...+.+-|+|+    |+.         +-|
T Consensus       145 ----------------g~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPd----g~~---------laV  195 (447)
T KOG4497|consen  145 ----------------GQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPD----GNW---------LAV  195 (447)
T ss_pred             ----------------CceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCC----CcE---------EEE
Confidence                            4555554432111000110 0111112233444555788999996    544         456


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      ||..-.-  .. ....-.-.+..++|+|.+++||.|+.|+-+||-+-   =.|.+..|+.+
T Consensus       196 wd~~Ley--kv-~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh---~tWk~f~eflh  250 (447)
T KOG4497|consen  196 WDNVLEY--KV-YAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNH---FTWKPFGEFLH  250 (447)
T ss_pred             ecchhhh--ee-eeeeeccceeEEEeccccceEEeeccchhhhhhce---eeeeehhhhcc
Confidence            7632110  00 01111135789999999999999999999999751   13666666544

>KOG2139|consensus

Probab=99.40  E-value=1.3e-10  Score=99.76  Aligned_cols=230  Identities=18%  Similarity=0.331  Sum_probs=145.2

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      -++.+++++--.-+|.+..|.+||+||-++.            ....++ --...|++++|. |-.+.-|+.|.. +-|.
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~ksst------------~pt~Lks~sQrnvtclawR-PlsaselavgCr-~gIc  165 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSST------------CPTKLKSVSQRNVTCLAWR-PLSASELAVGCR-AGIC  165 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCCC------------CCceecchhhcceeEEEec-cCCcceeeeeec-ceeE
Confidence            4566788886666888999999999987532            122222 235679999995 555677777765 4578


Q ss_pred             EEeCCCC------------cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeec-ccc
Q psy2762          94 IWRGDNG------------NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIA-AHT  159 (318)
Q Consensus        94 vWd~~~~------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~-~h~  159 (318)
                      +|.....            -..++.+.++| .+|.++.|++|  +..+++++. |..|.|||+..+...    .+. -..
T Consensus       166 iW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~d--gt~l~tAS~gsssi~iWdpdtg~~~----pL~~~gl  238 (445)
T KOG2139|consen  166 IWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNED--GTILVTASFGSSSIMIWDPDTGQKI----PLIPKGL  238 (445)
T ss_pred             EEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCC--CCEEeecccCcceEEEEcCCCCCcc----cccccCC
Confidence            9965321            11223344455 68999999999  677777776 568999998665532    222 233


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      .++.-+.|||+                 +.+|..+..|++.++|+.... +-.+.-.. -.+.|..-+|+|.+   ..+|
T Consensus       239 gg~slLkwSPd-----------------gd~lfaAt~davfrlw~e~q~-wt~erw~l-gsgrvqtacWspcG---sfLL  296 (445)
T KOG2139|consen  239 GGFSLLKWSPD-----------------GDVLFAATCDAVFRLWQENQS-WTKERWIL-GSGRVQTACWSPCG---SFLL  296 (445)
T ss_pred             CceeeEEEcCC-----------------CCEEEEecccceeeeehhccc-ceecceec-cCCceeeeeecCCC---CEEE
Confidence            46778999998                 578999999999999964322 11111111 22378999999973   3345


Q ss_pred             EEEeCCCeEEEEEcCCCc----------cee---eEEeee---------cCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         240 ASCSQDRKVIIWTSNDYV----------TWT---PFIMNT---------FDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~----------~~~---~~~~~~---------~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      .+++..  -+||.+.-..          .+.   +..+..         .-+....++|.|.|.+||+.=..
T Consensus       297 f~~sgs--p~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg  366 (445)
T KOG2139|consen  297 FACSGS--PRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKG  366 (445)
T ss_pred             EEEcCC--ceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcC
Confidence            555433  3444422110          000   011110         12568899999999999986443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=9.9e-11  Score=108.54  Aligned_cols=220  Identities=15%  Similarity=0.124  Sum_probs=131.9

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-E
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-S   85 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s   85 (318)
                      +.+.+.+.+.+|+|||++|+..+.+   ..|.+||+..+           .. ..+....+.+.+.+|++  +|+.|+ +
T Consensus       192 ~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g-----------~~-~~l~~~~g~~~~~~~SP--DG~~la~~  257 (427)
T PRK02889        192 LSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATG-----------RR-RVVANFKGSNSAPAWSP--DGRTLAVA  257 (427)
T ss_pred             ccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCC-----------CE-EEeecCCCCccceEECC--CCCEEEEE
Confidence            4577889999999999999887643   34899998632           21 12233344566789974  477665 6


Q ss_pred             EECCCeEEEEeC--CCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          86 CSYDRKVIIWRG--DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        86 ~s~Dg~v~vWd~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      .+.++...||.+  .++.   ...+..+.......+|+|+  +..++..+ .++...+|.......  ....+..+....
T Consensus       258 ~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpD--G~~l~f~s~~~g~~~Iy~~~~~~g--~~~~lt~~g~~~  330 (427)
T PRK02889        258 LSRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSPD--GRSIYFTSDRGGAPQIYRMPASGG--AAQRVTFTGSYN  330 (427)
T ss_pred             EccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcCC--CCEEEEEecCCCCcEEEEEECCCC--ceEEEecCCCCc
Confidence            678888888864  3333   2234445555667899999  55555444 456677776543322  122222222223


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ...+|+|+                 +++|+..+.++   .|.+||+.+++...   +... .......|+|+    +++|
T Consensus       331 ~~~~~SpD-----------------G~~Ia~~s~~~g~~~I~v~d~~~g~~~~---lt~~-~~~~~p~~spd----g~~l  385 (427)
T PRK02889        331 TSPRISPD-----------------GKLLAYISRVGGAFKLYVQDLATGQVTA---LTDT-TRDESPSFAPN----GRYI  385 (427)
T ss_pred             CceEECCC-----------------CCEEEEEEccCCcEEEEEEECCCCCeEE---ccCC-CCccCceECCC----CCEE
Confidence            45678987                 46777665544   69999988775432   2222 23467899996    6777


Q ss_pred             EEEeCCC-e--EEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         240 ASCSQDR-K--VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       240 ~s~s~D~-~--i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      +.++.++ .  +.+-+..+.   ....+..+.+.+...+|+|
T Consensus       386 ~~~~~~~g~~~l~~~~~~g~---~~~~l~~~~g~~~~p~wsp  424 (427)
T PRK02889        386 LYATQQGGRSVLAAVSSDGR---IKQRLSVQGGDVREPSWGP  424 (427)
T ss_pred             EEEEecCCCEEEEEEECCCC---ceEEeecCCCCCCCCccCC
Confidence            7666544 3  333344332   1223333445667778887

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=2.1e-10  Score=106.65  Aligned_cols=220  Identities=15%  Similarity=0.143  Sum_probs=132.6

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-E
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-S   85 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s   85 (318)
                      +.|...+...+|+|||++|+..+.+   ..|.+||+...           .. ..+..+.+...+.+|++  +|+.|+ +
T Consensus       200 t~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g-----------~~-~~l~~~~g~~~~~~~Sp--DG~~l~~~  265 (433)
T PRK04922        200 LRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATG-----------QR-ELVASFRGINGAPSFSP--DGRRLALT  265 (433)
T ss_pred             ecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCC-----------CE-EEeccCCCCccCceECC--CCCEEEEE
Confidence            3567788999999999999987743   35899998632           21 22333344455789974  477664 5


Q ss_pred             EECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          86 CSYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        86 ~s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      .+.++  .|.+||+.++...+   +..+......++|+|+  +..++..+ .++...+|.......  ....+..+....
T Consensus       266 ~s~~g~~~Iy~~d~~~g~~~~---lt~~~~~~~~~~~spD--G~~l~f~sd~~g~~~iy~~dl~~g--~~~~lt~~g~~~  338 (433)
T PRK04922        266 LSRDGNPEIYVMDLGSRQLTR---LTNHFGIDTEPTWAPD--GKSIYFTSDRGGRPQIYRVAASGG--SAERLTFQGNYN  338 (433)
T ss_pred             EeCCCCceEEEEECCCCCeEE---CccCCCCccceEECCC--CCEEEEEECCCCCceEEEEECCCC--CeEEeecCCCCc
Confidence            56666  58889988775332   3344455567899998  55555544 455544554432222  122333222234


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ...+|+|+                 +++|+..+.++   .|.+||+.+++..   .+. +........|+|+    |++|
T Consensus       339 ~~~~~SpD-----------------G~~Ia~~~~~~~~~~I~v~d~~~g~~~---~Lt-~~~~~~~p~~spd----G~~i  393 (433)
T PRK04922        339 ARASVSPD-----------------GKKIAMVHGSGGQYRIAVMDLSTGSVR---TLT-PGSLDESPSFAPN----GSMV  393 (433)
T ss_pred             cCEEECCC-----------------CCEEEEEECCCCceeEEEEECCCCCeE---ECC-CCCCCCCceECCC----CCEE
Confidence            46789997                 45666544332   5899998877543   222 2223456789996    7777


Q ss_pred             EEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         240 ASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       240 ~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      +..+.+   ..|.++++.+..   ...+..+.+.+...+|+|
T Consensus       394 ~~~s~~~g~~~L~~~~~~g~~---~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        394 LYATREGGRGVLAAVSTDGRV---RQRLVSADGEVREPAWSP  432 (433)
T ss_pred             EEEEecCCceEEEEEECCCCc---eEEcccCCCCCCCCccCC
Confidence            666653   346677775432   233333445667778886

>KOG3881|consensus

Probab=99.37  E-value=1e-10  Score=101.22  Aligned_cols=194  Identities=15%  Similarity=0.192  Sum_probs=139.8

Q ss_pred             EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC--CeEEEEeCCCCcEEE
Q psy2762          27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD--RKVIIWRGDNGNWFK  104 (318)
Q Consensus        27 ~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D--g~v~vWd~~~~~~~~  104 (318)
                      .|++|-.+|.+.+|....+    +-.   ...+..+..| ..+..+.- .|.+...+|+||..  ..++|||+++.  .+
T Consensus       117 ~Litc~~sG~l~~~~~k~~----d~h---ss~l~~la~g-~g~~~~r~-~~~~p~Iva~GGke~~n~lkiwdle~~--~q  185 (412)
T KOG3881|consen  117 TLITCVSSGNLQVRHDKSG----DLH---SSKLIKLATG-PGLYDVRQ-TDTDPYIVATGGKENINELKIWDLEQS--KQ  185 (412)
T ss_pred             EEEEEecCCcEEEEeccCC----ccc---cccceeeecC-Cceeeecc-CCCCCceEecCchhcccceeeeecccc--ee
Confidence            5777888999999987632    100   1123333333 34555654 35667889999999  89999998865  35


Q ss_pred             EEEecCC---------CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCc
Q psy2762         105 YYEYNNH---------DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLS  175 (318)
Q Consensus       105 ~~~~~~h---------~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~  175 (318)
                      ++.-...         +--++++.|-|......||+++.-+++++||.....+.  +..+.--..+++++..-|.     
T Consensus       186 iw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP--V~~fd~~E~~is~~~l~p~-----  258 (412)
T KOG3881|consen  186 IWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP--VAQFDFLENPISSTGLTPS-----  258 (412)
T ss_pred             eeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc--eeEeccccCcceeeeecCC-----
Confidence            5442211         12356788888755678999999999999998654432  2233333455666666664     


Q ss_pred             cccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       176 ~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                                  +++|++|..-+.+..||.+.+.. ....+.+.++.|++|-.+|.    ..+||++|.|+.|||+|+++
T Consensus       259 ------------gn~Iy~gn~~g~l~~FD~r~~kl-~g~~~kg~tGsirsih~hp~----~~~las~GLDRyvRIhD~kt  321 (412)
T KOG3881|consen  259 ------------GNFIYTGNTKGQLAKFDLRGGKL-LGCGLKGITGSIRSIHCHPT----HPVLASCGLDRYVRIHDIKT  321 (412)
T ss_pred             ------------CcEEEEecccchhheecccCcee-eccccCCccCCcceEEEcCC----CceEEeeccceeEEEeeccc
Confidence                        57899999999999999988753 34457889999999999995    78999999999999999987

>KOG1334|consensus

Probab=99.35  E-value=8.1e-12  Score=110.66  Aligned_cols=217  Identities=19%  Similarity=0.214  Sum_probs=155.2

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      ...|..|.|-|..|.|++  .|..|+|||.|..|.+||-..+..+..+. .+|...|....|-|.....-+++++.||+|
T Consensus       135 ~~kL~~H~GcVntV~FN~--~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~-SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv  211 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQ--RGDVLASGSDDLQVVVWDWVSGSPKLSFE-SGHCNNVFQAKFIPFSGDRTIVTSSRDGQV  211 (559)
T ss_pred             hhcccCCCCccceeeecc--cCceeeccCccceEEeehhhccCcccccc-cccccchhhhhccCCCCCcCceeccccCce
Confidence            467889999999999974  59999999999999999987766444332 478888888889887656778999999999


Q ss_pred             EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762         139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~  218 (318)
                      ++=.+...........+..|..++..++.-|+.                .+.|.++++|+.+.-+|+..+.+........
T Consensus       212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~s----------------p~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~  275 (559)
T KOG1334|consen  212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDS----------------PKPFLSCGEDAVVFHIDLRQDVPAEKFVCRE  275 (559)
T ss_pred             eeeeeccccceecceecccccCccceeeecCCC----------------CCcccccccccceeeeeeccCCccceeeeec
Confidence            986543222211234556799999999887763                2568999999999999988764333333222


Q ss_pred             -CCC---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce---------eeE-EeeecCCcEEEEEEcCCCCEEE
Q psy2762         219 -HSD---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW---------TPF-IMNTFDDVVWNVSWSLTGDILT  284 (318)
Q Consensus       219 -h~~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~---------~~~-~~~~~~~~v~~v~~spdg~~l~  284 (318)
                       +..   ..+.++-.|-   ...++++++.|..+|+||.......         .|. +.....-.|..++|+.++.-|.
T Consensus       276 ~~~~~~v~L~~Ia~~P~---nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElL  352 (559)
T KOG1334|consen  276 ADEKERVGLYTIAVDPR---NTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELL  352 (559)
T ss_pred             cCCccceeeeeEecCCC---CccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCcccee
Confidence             222   3578888885   4568999999999999997654321         011 1111123589999998776665


Q ss_pred             EEeCCCeEEEEEE
Q psy2762         285 VSCGDNSVSLWKE  297 (318)
Q Consensus       285 s~~~D~~v~iW~~  297 (318)
                      ++-.|--+.++..
T Consensus       353 aSYnDe~IYLF~~  365 (559)
T KOG1334|consen  353 ASYNDEDIYLFNK  365 (559)
T ss_pred             eeecccceEEecc
Confidence            5656667788753

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.35  E-value=5.3e-10  Score=104.04  Aligned_cols=218  Identities=14%  Similarity=0.130  Sum_probs=132.6

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-   84 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-   84 (318)
                      .+.|...+...+|+|||++|+..+.   +..|.+||+...           . ...+..+.+.+...+|++  +|+.|+ 
T Consensus       197 lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g-----------~-~~~l~~~~g~~~~~~~SP--DG~~la~  262 (435)
T PRK05137        197 LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETG-----------Q-RELVGNFPGMTFAPRFSP--DGRKVVM  262 (435)
T ss_pred             EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCC-----------c-EEEeecCCCcccCcEECC--CCCEEEE
Confidence            3467889999999999999988764   467999998632           2 233455667778889974  477664 


Q ss_pred             EEECCCe--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCC--eEEEEEeecCCCCcceeeecccc
Q psy2762          85 SCSYDRK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDG--TISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        85 s~s~Dg~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~--~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +.+.++.  |.+||+.++...   .+..+.......+|+|+  +..++..+ .++  .|.+++....    ..+.+..+.
T Consensus       263 ~~~~~g~~~Iy~~d~~~~~~~---~Lt~~~~~~~~~~~spD--G~~i~f~s~~~g~~~Iy~~d~~g~----~~~~lt~~~  333 (435)
T PRK05137        263 SLSQGGNTDIYTMDLRSGTTT---RLTDSPAIDTSPSYSPD--GSQIVFESDRSGSPQLYVMNADGS----NPRRISFGG  333 (435)
T ss_pred             EEecCCCceEEEEECCCCceE---EccCCCCccCceeEcCC--CCEEEEEECCCCCCeEEEEECCCC----CeEEeecCC
Confidence            6666766  555677766532   34445556678899999  55555544 344  4555554221    233443333


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      .......|+|+                 +++|+..+.+   ..|.+||+.++.. ..  +. ....+....|+|+    |
T Consensus       334 ~~~~~~~~Spd-----------------G~~ia~~~~~~~~~~i~~~d~~~~~~-~~--lt-~~~~~~~p~~spD----G  388 (435)
T PRK05137        334 GRYSTPVWSPR-----------------GDLIAFTKQGGGQFSIGVMKPDGSGE-RI--LT-SGFLVEGPTWAPN----G  388 (435)
T ss_pred             CcccCeEECCC-----------------CCEEEEEEcCCCceEEEEEECCCCce-Ee--cc-CCCCCCCCeECCC----C
Confidence            44566789997                 4566655433   3578888765542 22  21 1223667899996    6


Q ss_pred             cEEEEEeCC------CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         237 CMIASCSQD------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       237 ~~l~s~s~D------~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      +.|+..+.+      ..+.+.++.+..   ...+. ....+...+|+|
T Consensus       389 ~~i~~~~~~~~~~~~~~L~~~dl~g~~---~~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        389 RVIMFFRQTPGSGGAPKLYTVDLTGRN---EREVP-TPGDASDPAWSP  432 (435)
T ss_pred             CEEEEEEccCCCCCcceEEEEECCCCc---eEEcc-CCCCccCcccCC
Confidence            666655543      246666765532   22232 233456667776

>KOG1240|consensus

Probab=99.34  E-value=1.3e-10  Score=113.14  Aligned_cols=223  Identities=19%  Similarity=0.178  Sum_probs=144.1

Q ss_pred             cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-----CcEEEEEEecCCCcCeEEEEeeCCCCCcEE
Q psy2762          55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-----GNWFKYYEYNNHDSSVNSIAWAPKEFGLIL  129 (318)
Q Consensus        55 ~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-----~~~~~~~~~~~h~~~v~~v~~~p~~~~~~l  129 (318)
                      .|.++..+..|...|..++.+.+ ++.+|+|||.||+||+||...     +......++..-...+.++...+.  +..+
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~-~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~--~~~~ 1113 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSE-HTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN--GDQF 1113 (1431)
T ss_pred             cceEeehhhhccccccceeecCC-CCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC--CCeE
Confidence            47889999999999999998754 679999999999999999743     111222233334577889988887  6789


Q ss_pred             EEeecCCeEEEEEeecCCCC-cc---eeeeccccccc--ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762         130 ACGSSDGTISFLTYMSDTNS-WE---SRKIAAHTIGC--NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW  203 (318)
Q Consensus       130 asgs~d~~i~i~~~~~~~~~-~~---~~~~~~h~~~v--~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw  203 (318)
                      |+++.||.|.+.++..-... ..   .+....+..++  ..-+|...              .. ...++.+...+.|..|
T Consensus      1114 Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~--------------~~-S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1114 AVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAI--------------VQ-SHVLVYATDLSRIVSW 1178 (1431)
T ss_pred             EEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeeccccc--------------cc-ceeEEEEEeccceEEe
Confidence            99999999999876431110 00   00000111111  01111110              00 1257778888899999


Q ss_pred             EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC---
Q psy2762         204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG---  280 (318)
Q Consensus       204 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg---  280 (318)
                      |.....-.-..+..-..+.|++++.+|.    ++.+++|..-|.+-+||++=... ......++..++..|..+|.-   
T Consensus      1179 D~r~~~~~w~lk~~~~hG~vTSi~idp~----~~WlviGts~G~l~lWDLRF~~~-i~sw~~P~~~~i~~v~~~~~~~~~ 1253 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLKNQLRHGLVTSIVIDPW----CNWLVIGTSRGQLVLWDLRFRVP-ILSWEHPARAPIRHVWLCPTYPQE 1253 (1431)
T ss_pred             cchhhhhHHhhhcCccccceeEEEecCC----ceEEEEecCCceEEEEEeecCce-eecccCcccCCcceEEeeccCCCC
Confidence            9775421111122233466999999996    78999999999999999864321 111223445678888887753   


Q ss_pred             CEEEEEe--CCCeEEEEEECCC
Q psy2762         281 DILTVSC--GDNSVSLWKENTD  300 (318)
Q Consensus       281 ~~l~s~~--~D~~v~iW~~~~~  300 (318)
                      ...++++  ..+.|.+|++..+
T Consensus      1254 S~~vs~~~~~~nevs~wn~~~g 1275 (1431)
T KOG1240|consen 1254 SVSVSAGSSSNNEVSTWNMETG 1275 (1431)
T ss_pred             ceEEEecccCCCceeeeecccC
Confidence            3454544  4789999998775

>KOG3881|consensus

Probab=99.34  E-value=2.2e-10  Score=99.18  Aligned_cols=255  Identities=10%  Similarity=0.120  Sum_probs=169.6

Q ss_pred             cceeeeeeecCCC--CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          13 EDMIHDAEMDYLG--LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        13 ~~~v~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      ...|..+.|..++  ..|..++.|..+..+...+..    ..+ .-..+.+..+..+.|-.+...    ...|.+|-.+|
T Consensus        55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~----~~s-~~~~~~~~~l~~~~I~gl~~~----dg~Litc~~sG  125 (412)
T KOG3881|consen   55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFE----ISS-SLDDAKTVSLGTKSIKGLKLA----DGTLITCVSSG  125 (412)
T ss_pred             hhhhhhheeecCCceeEeeccccCcccccccccCCc----ccc-ccccccccccccccccchhhc----CCEEEEEecCC
Confidence            4456677776544  567777778788877765220    000 011233555667778777763    35678888999


Q ss_pred             eEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC--CeEEEEEeecCCCCcceeeecc----ccccc
Q psy2762          91 KVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD--GTISFLTYMSDTNSWESRKIAA----HTIGC  162 (318)
Q Consensus        91 ~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d--~~i~i~~~~~~~~~~~~~~~~~----h~~~v  162 (318)
                      .+++|....+.  ......+. ....+..+.-+|.. ..++|+|+..  ..+.|||+....+.|..+.+..    -..||
T Consensus       126 ~l~~~~~k~~d~hss~l~~la-~g~g~~~~r~~~~~-p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPv  203 (412)
T KOG3881|consen  126 NLQVRHDKSGDLHSSKLIKLA-TGPGLYDVRQTDTD-PYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPV  203 (412)
T ss_pred             cEEEEeccCCccccccceeee-cCCceeeeccCCCC-CceEecCchhcccceeeeecccceeeeeccCCCCccccceeee
Confidence            99999876332  11222222 22456667666654 4578889998  7889999866544443332221    11222


Q ss_pred             --ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         163 --NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       163 --~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                        +.+.|-|...               .+.||+++.-+.+|+||.+.+. .+...+.--..+|.++..-|+    +.+|+
T Consensus       204 W~tdi~Fl~g~~---------------~~~fat~T~~hqvR~YDt~~qR-RPV~~fd~~E~~is~~~l~p~----gn~Iy  263 (412)
T KOG3881|consen  204 WITDIRFLEGSP---------------NYKFATITRYHQVRLYDTRHQR-RPVAQFDFLENPISSTGLTPS----GNFIY  263 (412)
T ss_pred             eeccceecCCCC---------------CceEEEEecceeEEEecCcccC-cceeEeccccCcceeeeecCC----CcEEE
Confidence              2344444211               2579999999999999987542 133344444567999999996    78899


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEE-eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~-~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ++-.-+.+..+|.....  .+.. +.+..+.|.++..+|.+++||++|-|+-|||+|+.+.
T Consensus       264 ~gn~~g~l~~FD~r~~k--l~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr  322 (412)
T KOG3881|consen  264 TGNTKGQLAKFDLRGGK--LLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR  322 (412)
T ss_pred             EecccchhheecccCce--eeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc
Confidence            99999999999998754  1222 4566788999999999999999999999999998773

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.33  E-value=1.4e-07  Score=85.10  Aligned_cols=264  Identities=14%  Similarity=0.170  Sum_probs=157.5

Q ss_pred             eeeeeeecCCCCEEEEeeC----CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-C
Q psy2762          15 MIHDAEMDYLGLYLATCSS----DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-D   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~----D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-D   89 (318)
                      ...-++++|++++|.+...    ++.|..|.++..       +..-..+.+.......-..+++++  ++++|+++.+ +
T Consensus        38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~-------~g~L~~~~~~~~~g~~p~~i~~~~--~g~~l~vany~~  108 (345)
T PF10282_consen   38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPD-------TGTLTLLNSVPSGGSSPCHIAVDP--DGRFLYVANYGG  108 (345)
T ss_dssp             SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETT-------TTEEEEEEEEEESSSCEEEEEECT--TSSEEEEEETTT
T ss_pred             CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCC-------cceeEEeeeeccCCCCcEEEEEec--CCCEEEEEEccC
Confidence            4455888999999998876    578999988621       001123444432334445677753  5888888886 8


Q ss_pred             CeEEEEeCCC-CcEEEE---EEec--------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-eeec
Q psy2762          90 RKVIIWRGDN-GNWFKY---YEYN--------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIA  156 (318)
Q Consensus        90 g~v~vWd~~~-~~~~~~---~~~~--------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~~~  156 (318)
                      |.|.++++.. +.....   ....        ......-++.|+|++ ..++++.-....|.++++......... ..+.
T Consensus       109 g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg-~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~  187 (345)
T PF10282_consen  109 GSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDG-RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIK  187 (345)
T ss_dssp             TEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTS-SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEE
T ss_pred             CeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCC-CEEEEEecCCCEEEEEEEeCCCceEEEeeccc
Confidence            9999999876 332222   1111        112456789999984 234444444457888887544321111 1121


Q ss_pred             -ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc--CCeEEEEEEccc----C--CCCeeEEE
Q psy2762         157 -AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE--GDKWIEETKLEN----H--SDWVRDVA  227 (318)
Q Consensus       157 -~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~--~~~~~~~~~~~~----h--~~~V~~v~  227 (318)
                       ....+..-+.|+|+.                ....++.-.+++|.+++..  .+.+...+....    .  ......|.
T Consensus       188 ~~~G~GPRh~~f~pdg----------------~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  251 (345)
T PF10282_consen  188 VPPGSGPRHLAFSPDG----------------KYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIA  251 (345)
T ss_dssp             CSTTSSEEEEEE-TTS----------------SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEE
T ss_pred             cccCCCCcEEEEcCCc----------------CEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEE
Confidence             223345678888863                1234566778889999887  444433332211    1  12577899


Q ss_pred             EccCCCCCccEE-EEEeCCCeEEEEEcCCCc-cee-eEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC-CCCc
Q psy2762         228 WAPSWGLSKCMI-ASCSQDRKVIIWTSNDYV-TWT-PFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN-TDGA  302 (318)
Q Consensus       228 ~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~-~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~-~~~~  302 (318)
                      ++|+    |++| ++.-.+.+|-+|++.... ... .............++++|+|++|+++. .++.|.+|+++ .+|.
T Consensus       252 ispd----g~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~  327 (345)
T PF10282_consen  252 ISPD----GRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGK  327 (345)
T ss_dssp             E-TT----SSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred             EecC----CCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCc
Confidence            9997    5554 445567889999984321 111 122223334578999999999999988 46799999986 4677


Q ss_pred             eEEEee
Q psy2762         303 WQCITE  308 (318)
Q Consensus       303 ~~~~~~  308 (318)
                      +.....
T Consensus       328 l~~~~~  333 (345)
T PF10282_consen  328 LTPVGS  333 (345)
T ss_dssp             EEEEEE
T ss_pred             EEEecc
Confidence            765553

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.31  E-value=2.2e-09  Score=99.36  Aligned_cols=193  Identities=15%  Similarity=0.222  Sum_probs=121.4

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECC---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYD---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~D---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      ..+..+...+....|++  +|++|+.++.+   ..|.+||+.+++....   ..+...+.+++|+|++ ..++.+.+.++
T Consensus       183 ~~l~~~~~~~~~p~~Sp--dg~~la~~~~~~~~~~i~v~d~~~g~~~~~---~~~~~~~~~~~~spDg-~~l~~~~~~~~  256 (417)
T TIGR02800       183 QTITRSREPILSPAWSP--DGQKLAYVSFESGKPEIYVQDLATGQREKV---ASFPGMNGAPAFSPDG-SKLAVSLSKDG  256 (417)
T ss_pred             EEeecCCCceecccCCC--CCCEEEEEEcCCCCcEEEEEECCCCCEEEe---ecCCCCccceEECCCC-CEEEEEECCCC
Confidence            44556777888999974  58989887765   4799999987754332   2345566778999984 23444555555


Q ss_pred             --eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CC--eEEEEEccCCeEE
Q psy2762         137 --TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DN--LIKIWKQEGDKWI  211 (318)
Q Consensus       137 --~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~--~i~iwd~~~~~~~  211 (318)
                        .|.+|+...+    ....+..+........|+|+                 +++|+..+. ++  .|.++|+.+++..
T Consensus       257 ~~~i~~~d~~~~----~~~~l~~~~~~~~~~~~s~d-----------------g~~l~~~s~~~g~~~iy~~d~~~~~~~  315 (417)
T TIGR02800       257 NPDIYVMDLDGK----QLTRLTNGPGIDTEPSWSPD-----------------GKSIAFTSDRGGSPQIYMMDADGGEVR  315 (417)
T ss_pred             CccEEEEECCCC----CEEECCCCCCCCCCEEECCC-----------------CCEEEEEECCCCCceEEEEECCCCCEE
Confidence              4666665322    22344444444456678886                 355655443 33  5777777766532


Q ss_pred             EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC---eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR---KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      .   +..+...+..+.|+|+    +.+|+.++.++   .|.+|++.+..   ...+.. .......+|+|||+.|+.++.
T Consensus       316 ~---l~~~~~~~~~~~~spd----g~~i~~~~~~~~~~~i~~~d~~~~~---~~~l~~-~~~~~~p~~spdg~~l~~~~~  384 (417)
T TIGR02800       316 R---LTFRGGYNASPSWSPD----GDLIAFVHREGGGFNIAVMDLDGGG---ERVLTD-TGLDESPSFAPNGRMILYATT  384 (417)
T ss_pred             E---eecCCCCccCeEECCC----CCEEEEEEccCCceEEEEEeCCCCC---eEEccC-CCCCCCceECCCCCEEEEEEe
Confidence            2   2334455678899996    77888887776   78888887632   122221 122345689999999888876


Q ss_pred             CC
Q psy2762         289 DN  290 (318)
Q Consensus       289 D~  290 (318)
                      ++
T Consensus       385 ~~  386 (417)
T TIGR02800       385 RG  386 (417)
T ss_pred             CC
Confidence            54

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1272|consensus

Probab=99.30  E-value=5.8e-12  Score=111.00  Aligned_cols=229  Identities=17%  Similarity=0.236  Sum_probs=161.7

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +.|+++.|--+.+++|. .+-+-+.|||-.            |..+..++.| ..|..+.|. | .--+|++++.-|.++
T Consensus       171 Etv~Dv~~LHneq~~AV-AQK~y~yvYD~~------------GtElHClk~~-~~v~rLeFL-P-yHfLL~~~~~~G~L~  234 (545)
T KOG1272|consen  171 ETVRDVTFLHNEQFFAV-AQKKYVYVYDNN------------GTELHCLKRH-IRVARLEFL-P-YHFLLVAASEAGFLK  234 (545)
T ss_pred             hhhhhhhhhcchHHHHh-hhhceEEEecCC------------CcEEeehhhc-Cchhhhccc-c-hhheeeecccCCceE
Confidence            34555666555555553 556778888754            4566667654 467888986 3 357889999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      .-|+..++.+.  .+..-.+.+..+.-+|-  +-++-.|...|+|.+|.+....   .+.++..|..+|+++++.|.   
T Consensus       235 Y~DVS~GklVa--~~~t~~G~~~vm~qNP~--NaVih~GhsnGtVSlWSP~ske---PLvKiLcH~g~V~siAv~~~---  304 (545)
T KOG1272|consen  235 YQDVSTGKLVA--SIRTGAGRTDVMKQNPY--NAVIHLGHSNGTVSLWSPNSKE---PLVKILCHRGPVSSIAVDRG---  304 (545)
T ss_pred             EEeechhhhhH--HHHccCCccchhhcCCc--cceEEEcCCCceEEecCCCCcc---hHHHHHhcCCCcceEEECCC---
Confidence            99998886433  23334566777777887  6688899999999999864332   45667799999999999986   


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                                    |+|+||.+-|+.++|||++.-.  +.+++.. .-+...+++|..      -+..+|..-.|.||.-
T Consensus       305 --------------G~YMaTtG~Dr~~kIWDlR~~~--ql~t~~t-p~~a~~ls~Sqk------glLA~~~G~~v~iw~d  361 (545)
T KOG1272|consen  305 --------------GRYMATTGLDRKVKIWDLRNFY--QLHTYRT-PHPASNLSLSQK------GLLALSYGDHVQIWKD  361 (545)
T ss_pred             --------------CcEEeecccccceeEeeecccc--ccceeec-CCCccccccccc------cceeeecCCeeeeehh
Confidence                          6899999999999999987543  3333322 234677888874      2555677888999953


Q ss_pred             CCC---cceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCe
Q psy2762         254 NDY---VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNS  291 (318)
Q Consensus       254 ~~~---~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~  291 (318)
                      ...   ....+.+......+|..+.|+|-...|..|...|-
T Consensus       362 ~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~  402 (545)
T KOG1272|consen  362 ALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGI  402 (545)
T ss_pred             hhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCc
Confidence            222   12234444445578999999998777777666553

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.28  E-value=3.8e-10  Score=93.04  Aligned_cols=133  Identities=20%  Similarity=0.396  Sum_probs=87.8

Q ss_pred             eEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          91 KVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        91 ~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      ...||.++.. .......+. ..++|.+++|+|++....++.|..+..|.+|+.. ..   .+..  -+...++.+.|+|
T Consensus        38 ~~~l~~~~~~~~~~~~i~l~-~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~---~i~~--~~~~~~n~i~wsP  110 (194)
T PF08662_consen   38 EFELFYLNEKNIPVESIELK-KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GK---KIFS--FGTQPRNTISWSP  110 (194)
T ss_pred             eEEEEEEecCCCccceeecc-CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-cc---EeEe--ecCCCceEEEECC
Confidence            4555554222 222333332 3457999999998543334556677899999873 11   1222  2345678899999


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC--
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ--  244 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~--  244 (318)
                      +                 |++||+++.+   |.|.+||.++.+.+  .+. .|. .+..+.|+|+    |++|+++..  
T Consensus       111 ~-----------------G~~l~~~g~~n~~G~l~~wd~~~~~~i--~~~-~~~-~~t~~~WsPd----Gr~~~ta~t~~  165 (194)
T PF08662_consen  111 D-----------------GRFLVLAGFGNLNGDLEFWDVRKKKKI--STF-EHS-DATDVEWSPD----GRYLATATTSP  165 (194)
T ss_pred             C-----------------CCEEEEEEccCCCcEEEEEECCCCEEe--ecc-ccC-cEEEEEEcCC----CCEEEEEEecc
Confidence            7                 5788887644   56999999876543  333 233 3789999996    888888874  


Q ss_pred             ----CCeEEEEEcCC
Q psy2762         245 ----DRKVIIWTSND  255 (318)
Q Consensus       245 ----D~~i~vw~~~~  255 (318)
                          |..++||+..+
T Consensus       166 r~~~dng~~Iw~~~G  180 (194)
T PF08662_consen  166 RLRVDNGFKIWSFQG  180 (194)
T ss_pred             ceeccccEEEEEecC
Confidence                78889998865

>KOG0974|consensus

Probab=99.28  E-value=1.7e-10  Score=110.56  Aligned_cols=199  Identities=17%  Similarity=0.216  Sum_probs=143.1

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC---eEEEEecCCCCCcEEEEEECCC
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP---VWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +.+....+.-..+.++....++.+-+||....           ...... .+...   ..++-+-...+.-++++|+.-+
T Consensus        88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~-----------~~~~~i-~~~er~~l~~~~~~g~s~~~~~i~~gsv~~  155 (967)
T KOG0974|consen   88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNS-----------SVLSKI-QSDERCTLYSSLIIGDSAEELYIASGSVFG  155 (967)
T ss_pred             ccccccchhhhcceEEEEEcCceEEEEecccC-----------ceehhc-CCCceEEEEeEEEEeccCcEEEEEeccccc
Confidence            34444556666778888888999999998632           111111 11111   0111111112356899999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .|.+|++... ..+. .+.+|.+.|.++.++.+  +.++++.|.|.++++|++.+....  .....+|+.++..+.+.|+
T Consensus       156 ~iivW~~~~d-n~p~-~l~GHeG~iF~i~~s~d--g~~i~s~SdDRsiRlW~i~s~~~~--~~~~fgHsaRvw~~~~~~n  229 (967)
T KOG0974|consen  156 EIIVWKPHED-NKPI-RLKGHEGSIFSIVTSLD--GRYIASVSDDRSIRLWPIDSREVL--GCTGFGHSARVWACCFLPN  229 (967)
T ss_pred             cEEEEecccc-CCcc-eecccCCceEEEEEccC--CcEEEEEecCcceeeeeccccccc--CcccccccceeEEEEeccc
Confidence            9999997632 2233 46799999999999988  789999999999999998655421  2245689999999999984


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC-CeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD-WVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~-~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                                         +|+|+++|.+.|+|+....+   ..++++|.. .+..+...+.    .-.++|++.|+.++
T Consensus       230 -------------------~i~t~gedctcrvW~~~~~~---l~~y~~h~g~~iw~~~~~~~----~~~~vT~g~Ds~lk  283 (967)
T KOG0974|consen  230 -------------------RIITVGEDCTCRVWGVNGTQ---LEVYDEHSGKGIWKIAVPIG----VIIKVTGGNDSTLK  283 (967)
T ss_pred             -------------------eeEEeccceEEEEEecccce---ehhhhhhhhcceeEEEEcCC----ceEEEeeccCcchh
Confidence                               69999999999999765433   336777753 4888888885    67899999999999


Q ss_pred             EEEcCCC
Q psy2762         250 IWTSNDY  256 (318)
Q Consensus       250 vw~~~~~  256 (318)
                      +|++...
T Consensus       284 ~~~l~~r  290 (967)
T KOG0974|consen  284 LWDLNGR  290 (967)
T ss_pred             hhhhhcc
Confidence            9987653

>KOG0280|consensus

Probab=99.27  E-value=2.2e-10  Score=95.88  Aligned_cols=202  Identities=18%  Similarity=0.154  Sum_probs=131.5

Q ss_pred             eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      .++.|++.|..++++-.+|.+.+-+...+         .-+.+++++.|.-+.|-+.|+. .+++++.+||.|+.+..||
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~---------~le~vq~wk~He~E~Wta~f~~-~~pnlvytGgDD~~l~~~D  194 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEM---------VLEKVQTWKVHEFEAWTAKFSD-KEPNLVYTGGDDGSLSCWD  194 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEeccee---------eeeecccccccceeeeeeeccc-CCCceEEecCCCceEEEEE
Confidence            34667888888888888888884433211         0112447899999999999974 5689999999999999999


Q ss_pred             CCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCc
Q psy2762          97 GDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLS  175 (318)
Q Consensus        97 ~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~  175 (318)
                      ++-.+ ..++. ...|...|.+|.-+|. .+.++++|+.|..|++||.++-.+..   .-..-.++|..+.++|...   
T Consensus       195 ~R~p~-~~i~~n~kvH~~GV~SI~ss~~-~~~~I~TGsYDe~i~~~DtRnm~kPl---~~~~v~GGVWRi~~~p~~~---  266 (339)
T KOG0280|consen  195 IRIPK-TFIWHNSKVHTSGVVSIYSSPP-KPTYIATGSYDECIRVLDTRNMGKPL---FKAKVGGGVWRIKHHPEIF---  266 (339)
T ss_pred             ecCCc-ceeeecceeeecceEEEecCCC-CCceEEEeccccceeeeehhcccCcc---ccCccccceEEEEecchhh---
Confidence            88332 12222 3458899999998886 47899999999999999986443211   1113347899999998632   


Q ss_pred             cccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---EEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCCeEE-E
Q psy2762         176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---EETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVI-I  250 (318)
Q Consensus       176 ~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~-v  250 (318)
                                  +..|+++=. +-.+|-+...+...   .....+.|.+-++.-.|..    ....||||+ .|+.++ +
T Consensus       267 ------------~~lL~~CMh-~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~----~~~~lATCsFYDk~~~~~  329 (339)
T KOG0280|consen  267 ------------HRLLAACMH-NGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDS----KDSFLATCSFYDKKIRQL  329 (339)
T ss_pred             ------------hHHHHHHHh-cCceEEEecccccchheeeeccccccceeecccccc----ccceeeeeeccccceeee
Confidence                        122222222 23455554433211   2333456655555555533    245788876 477755 7


Q ss_pred             EEc
Q psy2762         251 WTS  253 (318)
Q Consensus       251 w~~  253 (318)
                      |-.
T Consensus       330 Wl~  332 (339)
T KOG0280|consen  330 WLH  332 (339)
T ss_pred             eee
Confidence            743

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.24  E-value=1.9e-08  Score=91.06  Aligned_cols=256  Identities=16%  Similarity=0.116  Sum_probs=132.6

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .++..|+ ..-..+.|+|||++++.++.||.|.++|+.+           ++.+++++.... -.++++++  +|++++.
T Consensus        30 ~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~-----------~~~v~~i~~G~~-~~~i~~s~--DG~~~~v   94 (369)
T PF02239_consen   30 ARIPTGG-APHAGLKFSPDGRYLYVANRDGTVSVIDLAT-----------GKVVATIKVGGN-PRGIAVSP--DGKYVYV   94 (369)
T ss_dssp             EEEE-ST-TEEEEEE-TT-SSEEEEEETTSEEEEEETTS-----------SSEEEEEE-SSE-EEEEEE----TTTEEEE
T ss_pred             EEEcCCC-CceeEEEecCCCCEEEEEcCCCeEEEEECCc-----------ccEEEEEecCCC-cceEEEcC--CCCEEEE
Confidence            3344443 2334477999999999999999999999973           457777775443 46788874  5888887


Q ss_pred             EE-CCCeEEEEeCCCCcEEEEEEecC-----CCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeeccc
Q psy2762          86 CS-YDRKVIIWRGDNGNWFKYYEYNN-----HDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        86 ~s-~Dg~v~vWd~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      +. .++.+.++|.++-+.+......+     ....+..|..+|.  ...++..-.| +.|.+.|+..... .....+. -
T Consensus        95 ~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~--~~~fVv~lkd~~~I~vVdy~d~~~-~~~~~i~-~  170 (369)
T PF02239_consen   95 ANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPG--RPEFVVNLKDTGEIWVVDYSDPKN-LKVTTIK-V  170 (369)
T ss_dssp             EEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SS--SSEEEEEETTTTEEEEEETTTSSC-EEEEEEE--
T ss_pred             EecCCCceeEeccccccceeecccccccccccCCCceeEEecCC--CCEEEEEEccCCeEEEEEeccccc-cceeeec-c
Confidence            76 58999999988765444332221     2346778877887  3334444444 6776666643321 1111221 1


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---------------------------
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---------------------------  211 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---------------------------  211 (318)
                      ........|+|+..+                +++....++.|-++|.++++..                           
T Consensus       171 g~~~~D~~~dpdgry----------------~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~  234 (369)
T PF02239_consen  171 GRFPHDGGFDPDGRY----------------FLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWA  234 (369)
T ss_dssp             -TTEEEEEE-TTSSE----------------EEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEE
T ss_pred             cccccccccCcccce----------------eeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEe
Confidence            122345567775321                1222222333333333322111                           


Q ss_pred             --------------------------EEEEcccCCCCeeEEEEccCCCCCccEEEEE----eCCCeEEEEEcCCCcceee
Q psy2762         212 --------------------------EETKLENHSDWVRDVAWAPSWGLSKCMIASC----SQDRKVIIWTSNDYVTWTP  261 (318)
Q Consensus       212 --------------------------~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~----s~D~~i~vw~~~~~~~~~~  261 (318)
                                                ...+++..... ..+..+|+    +.++...    ....+|.|+|.++..  ..
T Consensus       235 ~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~----s~~vwvd~~~~~~~~~v~viD~~tl~--~~  307 (369)
T PF02239_consen  235 TSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPD----SRYVWVDTFLNPDADTVQVIDKKTLK--VV  307 (369)
T ss_dssp             EEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-----SEEEEE-TT-SSHT-EEEEECCGTE--EE
T ss_pred             eccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCC----CccEEeeccCCCCCceEEEEECcCcc--ee
Confidence                                      11122222222 45566775    5666665    456889999987742  11


Q ss_pred             EEee-ecCCcEEEEEEcCCCCEEEEEeCC--CeEEEEEECCCCce
Q psy2762         262 FIMN-TFDDVVWNVSWSLTGDILTVSCGD--NSVSLWKENTDGAW  303 (318)
Q Consensus       262 ~~~~-~~~~~v~~v~~spdg~~l~s~~~D--~~v~iW~~~~~~~~  303 (318)
                      ..+. .....+.++.|++||+++..+..|  +.|.|+|..+-...
T Consensus       308 ~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~  352 (369)
T PF02239_consen  308 KTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEK  352 (369)
T ss_dssp             E-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred             EEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEE
Confidence            1121 122358899999999987766543  36999996664333

...

>KOG2139|consensus

Probab=99.23  E-value=1.4e-09  Score=93.50  Aligned_cols=198  Identities=21%  Similarity=0.328  Sum_probs=129.8

Q ss_pred             eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN  148 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~  148 (318)
                      +..++| |+ .=..||++.-|-+|+++|-... .....+ ..-...|.|++|-|-. +..++.|...| |.||......+
T Consensus       101 lr~~aW-hq-H~~~fava~nddvVriy~ksst-~pt~Lk-s~sQrnvtclawRPls-aselavgCr~g-IciW~~s~tln  174 (445)
T KOG2139|consen  101 LRGVAW-HQ-HIIAFAVATNDDVVRIYDKSST-CPTKLK-SVSQRNVTCLAWRPLS-ASELAVGCRAG-ICIWSDSRTLN  174 (445)
T ss_pred             eeeEee-ch-hhhhhhhhccCcEEEEeccCCC-CCceec-chhhcceeEEEeccCC-cceeeeeecce-eEEEEcCcccc
Confidence            566888 44 3467899999999999986652 222221 1123569999999976 45677776655 67896532211


Q ss_pred             C-cc----------eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-CeEEEEEccCCeEEEEEEc
Q psy2762         149 S-WE----------SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKL  216 (318)
Q Consensus       149 ~-~~----------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-~~i~iwd~~~~~~~~~~~~  216 (318)
                      . ..          +.+-.+| .+|.++.|.++                 +..+++++.+ ..|.|||.+++...++.. 
T Consensus       175 ~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~d-----------------gt~l~tAS~gsssi~iWdpdtg~~~pL~~-  235 (445)
T KOG2139|consen  175 ANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNED-----------------GTILVTASFGSSSIMIWDPDTGQKIPLIP-  235 (445)
T ss_pred             cccccccccccchhheeCCCC-ceeeEEEEcCC-----------------CCEEeecccCcceEEEEcCCCCCcccccc-
Confidence            0 00          1111233 57889999887                 4567777754 469999999886554432 


Q ss_pred             ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         217 ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       217 ~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                       ---..+.-+.|||+    +.+|..+.-|+..++|....  .|..+.-.--.+.|.+..|+|+|+.|+-++. |.-+|+.
T Consensus       236 -~glgg~slLkwSPd----gd~lfaAt~davfrlw~e~q--~wt~erw~lgsgrvqtacWspcGsfLLf~~s-gsp~lys  307 (445)
T KOG2139|consen  236 -KGLGGFSLLKWSPD----GDVLFAATCDAVFRLWQENQ--SWTKERWILGSGRVQTACWSPCGSFLLFACS-GSPRLYS  307 (445)
T ss_pred             -cCCCceeeEEEcCC----CCEEEEecccceeeeehhcc--cceecceeccCCceeeeeecCCCCEEEEEEc-CCceEEE
Confidence             22344778999997    77888899999999995432  1221111122458999999999998876664 4567777


Q ss_pred             ECC
Q psy2762         297 ENT  299 (318)
Q Consensus       297 ~~~  299 (318)
                      +..
T Consensus       308 l~f  310 (445)
T KOG2139|consen  308 LTF  310 (445)
T ss_pred             Eee
Confidence            544

>KOG0280|consensus

Probab=99.21  E-value=1.3e-09  Score=91.36  Aligned_cols=200  Identities=16%  Similarity=0.160  Sum_probs=133.3

Q ss_pred             EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc
Q psy2762          71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW  150 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~  150 (318)
                      ++.|+.  .+..++++-.+|.+.+-+.........+.++.|..++..++|+..++ .++.+|+.|+.+..||.+.++ .+
T Consensus       126 slD~~~--~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~p-nlvytGgDD~~l~~~D~R~p~-~~  201 (339)
T KOG0280|consen  126 SLDIST--SGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEP-NLVYTGGDDGSLSCWDIRIPK-TF  201 (339)
T ss_pred             EEEeec--cCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCC-ceEEecCCCceEEEEEecCCc-ce
Confidence            566653  47788898889988865555444444556778999999999998764 688999999999999997443 34


Q ss_pred             ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEc
Q psy2762         151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWA  229 (318)
Q Consensus       151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~s  229 (318)
                      .....+-|..+|.++.-+|..                ..+|+||+.|-.|++||.++. ++....   .-.+.|..+.++
T Consensus       202 i~~n~kvH~~GV~SI~ss~~~----------------~~~I~TGsYDe~i~~~DtRnm~kPl~~~---~v~GGVWRi~~~  262 (339)
T KOG0280|consen  202 IWHNSKVHTSGVVSIYSSPPK----------------PTYIATGSYDECIRVLDTRNMGKPLFKA---KVGGGVWRIKHH  262 (339)
T ss_pred             eeecceeeecceEEEecCCCC----------------CceEEEeccccceeeeehhcccCccccC---ccccceEEEEec
Confidence            444566799999999888753                468999999999999998743 322222   223669999999


Q ss_pred             cCCCCCccEEEEEeCCCeEEEEEcCCCcce---eeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEE-EEE
Q psy2762         230 PSWGLSKCMIASCSQDRKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVS-LWK  296 (318)
Q Consensus       230 p~~~~~~~~l~s~s~D~~i~vw~~~~~~~~---~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~-iW~  296 (318)
                      |.-.  ..+|++ +.-.-.+|-+..+....   .......|......-.|.-....||+.+ .|+.++ +|-
T Consensus       263 p~~~--~~lL~~-CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl  331 (339)
T KOG0280|consen  263 PEIF--HRLLAA-CMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWL  331 (339)
T ss_pred             chhh--hHHHHH-HHhcCceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeee
Confidence            9621  223333 33333567666554322   1122334556666667744445677765 366644 664

>KOG1409|consensus

Probab=99.20  E-value=1.9e-09  Score=92.14  Aligned_cols=250  Identities=17%  Similarity=0.197  Sum_probs=166.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ..+||.+-|++...-|...-+++.+.|.++|||--.+.          +..-.. ...-..++.++.+.+  +..+|+.|
T Consensus        19 ~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds----------~q~wpsI~~~mP~~~~~~~y~~--e~~~L~vg   86 (404)
T KOG1409|consen   19 KIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDS----------GQYWPSIYHYMPSPCSAMEYVS--ESRRLYVG   86 (404)
T ss_pred             hhcCchhhhhhheeccCCCCeEEccccceeeeEEeccc----------cccCchhhhhCCCCceEeeeec--cceEEEEE
Confidence            44799999999988888888999999999999953211          111111 112346677788753  36778887


Q ss_pred             ECCCeEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          87 SYDRKVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        87 s~Dg~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      -..|++.-+-....  +-........|...|..+-|+..  ...+++.+.|+.+..--.+.+.      .+-++.....+
T Consensus        87 ~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~--~e~V~s~~~dk~~~~hc~e~~~------~lg~Y~~~~~~  158 (404)
T KOG1409|consen   87 QDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLT--HEWVLSTGKDKQFAWHCTESGN------RLGGYNFETPA  158 (404)
T ss_pred             EecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCC--ceeEEEeccccceEEEeeccCC------cccceEeeccC
Confidence            77788877743321  11112234468889999988865  4577888888876432222221      11111111110


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      .+  +.      +        + ..+...|-..|.|-+-.+....+....++.+|.+.+++++|.|.    ...|.||..
T Consensus       159 t~--~~------~--------d-~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~----~~~LfSg~~  217 (404)
T KOG1409|consen  159 SA--LQ------F--------D-ALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPG----QRLLFSGAS  217 (404)
T ss_pred             CC--Cc------e--------e-eEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCC----CcEEEeccc
Confidence            00  00      0        0 01233444455555554444444456778999999999999995    778999999


Q ss_pred             CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      |..+.+||+.... ....++.+|.+.|..+.+.+.-+.|.|++.||.|.+|+.+.
T Consensus       218 d~~vi~wdigg~~-g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  218 DHSVIMWDIGGRK-GTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             cCceEEEeccCCc-ceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccc
Confidence            9999999997654 34557788999999999999999999999999999999876

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.19  E-value=1.2e-09  Score=92.24  Aligned_cols=260  Identities=17%  Similarity=0.220  Sum_probs=166.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------cCeEEEEecCC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------GPVWQVAWAHP   77 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~v~~~~~   77 (318)
                      ....+.|+++.|.-.|.||++|...|.|.+|..+..      .....+....+++|.            ..|..+.|-.+
T Consensus        23 ~tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s------~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~   96 (460)
T COG5170          23 STEADKITAVEFDETGLYLATGDKGGRVVLFEREKS------YGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDD   96 (460)
T ss_pred             ccccceeeEEEeccccceEeecCCCceEEEeecccc------cccchhhhhhhcccccchhhhhhccHHHHhhheeeecC
Confidence            445678999999999999999988899999986522      011123344455553            34777888655


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCC-------------------------------c------EEE---EE-EecCCCcCeE
Q psy2762          78 QFGTLLASCSYDRKVIIWRGDNG-------------------------------N------WFK---YY-EYNNHDSSVN  116 (318)
Q Consensus        78 ~~~~~las~s~Dg~v~vWd~~~~-------------------------------~------~~~---~~-~~~~h~~~v~  116 (318)
                      ..-..+.-.+-|++|++|.+...                               +      .++   .. ....|+-.++
T Consensus        97 t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiN  176 (460)
T COG5170          97 TGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHIN  176 (460)
T ss_pred             CCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEee
Confidence            44456666778999999987421                               0      000   01 1135777899


Q ss_pred             EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc-----ccceeeeCCCCCCCccccccCCCCCCccceE
Q psy2762         117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-----GCNAVSWGPGIGSLSELDLKGSKLGGVAKRL  191 (318)
Q Consensus       117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  191 (318)
                      +++|+.+.  ..+++ ..|=.|.+|.+......+.+..++.|..     -+++..|+|..                -..+
T Consensus       177 SiS~NsD~--et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~----------------cn~f  237 (460)
T COG5170         177 SISFNSDK--ETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEM----------------CNVF  237 (460)
T ss_pred             eeeecCch--heeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhH----------------cceE
Confidence            99999883  33444 3466788898765555555556665543     35677788752                1345


Q ss_pred             EEecCCCeEEEEEccCCe-----EE---------EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         192 VSGGCDNLIKIWKQEGDK-----WI---------EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~-----~~---------~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                      --.+..|.|++-|++...     ..         ...-+++-...|.++.|+|.    |++|++-+. -+|+|||..-..
T Consensus       238 mYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~n----gryIlsRdy-ltvkiwDvnm~k  312 (460)
T COG5170         238 MYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDN----GRYILSRDY-LTVKIWDVNMAK  312 (460)
T ss_pred             EEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCC----CcEEEEecc-ceEEEEeccccc
Confidence            566777999999987321     00         00112233456888999995    888876543 569999986543


Q ss_pred             ceeeEEeeecC------------Cc---EEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         258 TWTPFIMNTFD------------DV---VWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       258 ~~~~~~~~~~~------------~~---v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      . .....+-|.            +.   -..+.||-|.+.+.+|+..+..-|+-+.+.
T Consensus       313 ~-pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~ss  369 (460)
T COG5170         313 N-PIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDSS  369 (460)
T ss_pred             C-CceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeeccccC
Confidence            1 122222221            11   346899999999999998888888875543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.18  E-value=6.5e-09  Score=96.17  Aligned_cols=188  Identities=19%  Similarity=0.194  Sum_probs=114.3

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SC   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~   86 (318)
                      .+...+...+|+|+|++|+.++.+   ..|.+||+...           .. ..+..+.+.+.+++|++  +++.|+ +.
T Consensus       187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g-----------~~-~~~~~~~~~~~~~~~sp--Dg~~l~~~~  252 (417)
T TIGR02800       187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATG-----------QR-EKVASFPGMNGAPAFSP--DGSKLAVSL  252 (417)
T ss_pred             cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCC-----------CE-EEeecCCCCccceEECC--CCCEEEEEE
Confidence            456678889999999999987654   47999998632           21 22334556677789974  477665 45


Q ss_pred             ECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCe--EEEEEeecCCCCcceeeecccccc
Q psy2762          87 SYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGT--ISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        87 s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~--i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      +.++  .|.+||+.++....   +..+.......+|+|+  +..++..+ .++.  |.+++..  ..  +...+..+...
T Consensus       253 ~~~~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~s~d--g~~l~~~s~~~g~~~iy~~d~~--~~--~~~~l~~~~~~  323 (417)
T TIGR02800       253 SKDGNPDIYVMDLDGKQLTR---LTNGPGIDTEPSWSPD--GKSIAFTSDRGGSPQIYMMDAD--GG--EVRRLTFRGGY  323 (417)
T ss_pred             CCCCCccEEEEECCCCCEEE---CCCCCCCCCCEEECCC--CCEEEEEECCCCCceEEEEECC--CC--CEEEeecCCCC
Confidence            5554  57788887764322   3334444556789998  44554443 3443  4444432  21  22334334445


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      +....|+|+                 +.+|+..+.++   .|.+||+.++....   +... .......|+|+    +.+
T Consensus       324 ~~~~~~spd-----------------g~~i~~~~~~~~~~~i~~~d~~~~~~~~---l~~~-~~~~~p~~spd----g~~  378 (417)
T TIGR02800       324 NASPSWSPD-----------------GDLIAFVHREGGGFNIAVMDLDGGGERV---LTDT-GLDESPSFAPN----GRM  378 (417)
T ss_pred             ccCeEECCC-----------------CCEEEEEEccCCceEEEEEeCCCCCeEE---ccCC-CCCCCceECCC----CCE
Confidence            567788886                 45677766665   68888887754322   2222 12345689996    666


Q ss_pred             EEEEeCCC
Q psy2762         239 IASCSQDR  246 (318)
Q Consensus       239 l~s~s~D~  246 (318)
                      |+..+.++
T Consensus       379 l~~~~~~~  386 (417)
T TIGR02800       379 ILYATTRG  386 (417)
T ss_pred             EEEEEeCC
Confidence            76666654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.13  E-value=7.9e-08  Score=89.69  Aligned_cols=209  Identities=16%  Similarity=0.128  Sum_probs=117.4

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECC-C--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYD-R--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      +.+..+...+.+..|++  +|+.|+..+.+ +  .|.+||+.+++......+.   ......+|+|++ ..++.+.+.++
T Consensus       211 ~~l~~~~~~~~~p~wSP--DG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~wSPDG-~~La~~~~~~g  284 (448)
T PRK04792        211 QMLLRSPEPLMSPAWSP--DGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRFSPDG-KKLALVLSKDG  284 (448)
T ss_pred             eEeecCCCcccCceECC--CCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeECCCC-CEEEEEEeCCC
Confidence            34455677888999974  58888876653 3  5777888776543333232   334578999994 23444556677


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCe--EEEEEccCCeEEEE
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNL--IKIWKQEGDKWIEE  213 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~--i~iwd~~~~~~~~~  213 (318)
                      ...||-+.....  +...+..+........|+|+                 +++|+..+ .++.  |.++|+.+++....
T Consensus       285 ~~~Iy~~dl~tg--~~~~lt~~~~~~~~p~wSpD-----------------G~~I~f~s~~~g~~~Iy~~dl~~g~~~~L  345 (448)
T PRK04792        285 QPEIYVVDIATK--ALTRITRHRAIDTEPSWHPD-----------------GKSLIFTSERGGKPQIYRVNLASGKVSRL  345 (448)
T ss_pred             CeEEEEEECCCC--CeEECccCCCCccceEECCC-----------------CCEEEEEECCCCCceEEEEECCCCCEEEE
Confidence            644443322221  23444444444567789997                 34454433 3444  55566766654322


Q ss_pred             EEcccCCCCeeEEEEccCCCCCccEEEEEeC-CCeEEE--EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC-C
Q psy2762         214 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DRKVII--WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-D  289 (318)
Q Consensus       214 ~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~~i~v--w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~-D  289 (318)
                       ++.++  .....+|+|+    |.+|+..+. ++..+|  +++.+..   ...+... ....+.+|+|||+.|+.++. +
T Consensus       346 -t~~g~--~~~~~~~SpD----G~~l~~~~~~~g~~~I~~~dl~~g~---~~~lt~~-~~d~~ps~spdG~~I~~~~~~~  414 (448)
T PRK04792        346 -TFEGE--QNLGGSITPD----GRSMIMVNRTNGKFNIARQDLETGA---MQVLTST-RLDESPSVAPNGTMVIYSTTYQ  414 (448)
T ss_pred             -ecCCC--CCcCeeECCC----CCEEEEEEecCCceEEEEEECCCCC---eEEccCC-CCCCCceECCCCCEEEEEEecC
Confidence             23333  2345789996    666666554 444444  5655432   2222211 12234589999999877654 4


Q ss_pred             CeEEEEEECCCCceE
Q psy2762         290 NSVSLWKENTDGAWQ  304 (318)
Q Consensus       290 ~~v~iW~~~~~~~~~  304 (318)
                      +.-.||-.+..|.+.
T Consensus       415 g~~~l~~~~~~G~~~  429 (448)
T PRK04792        415 GKQVLAAVSIDGRFK  429 (448)
T ss_pred             CceEEEEEECCCCce
Confidence            444455445556544

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.13  E-value=4.9e-08  Score=90.43  Aligned_cols=224  Identities=14%  Similarity=0.138  Sum_probs=125.0

Q ss_pred             CcceeeeeeecCCCCE--E-EEeeCCCcEEEE--EcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762          12 HEDMIHDAEMDYLGLY--L-ATCSSDHTVKVF--NLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~--l-~s~s~D~~v~vw--d~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.......+|+|||+.  + +..-.++.-.||  +++.+         ....+..+   .+.....+|++  ||+.||..
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g---------~~~~lt~~---~g~~~~p~wSP--DG~~Laf~  248 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENP---------AGKKILAL---QGNQLMPTFSP--RKKLLAFI  248 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCC---------CceEeecC---CCCccceEECC--CCCEEEEE
Confidence            3455677899999975  2 244445554455  55422         22334334   34445678974  58888765


Q ss_pred             EC-----CCeEEEEeCCCC---cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecc
Q psy2762          87 SY-----DRKVIIWRGDNG---NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        87 s~-----Dg~v~vWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      +.     |-.+.+|++..+   ....+  ...+.......+|+||  +..++..+ .++...+|....+........+..
T Consensus       249 s~~~g~~di~~~~~~~~~g~~g~~~~l--t~~~~~~~~~p~wSPD--G~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~  324 (428)
T PRK01029        249 SDRYGNPDLFIQSFSLETGAIGKPRRL--LNEAFGTQGNPSFSPD--GTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTK  324 (428)
T ss_pred             ECCCCCcceeEEEeecccCCCCcceEe--ecCCCCCcCCeEECCC--CCEEEEEECCCCCceEEEEECcccccceEEecc
Confidence            53     334556776542   21222  1222234467899999  55555444 567666665432211112333444


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      +...+....|+|+                 ++.|+..+.+   ..|.+||+.+++...   +......+....|+|+   
T Consensus       325 ~~~~~~~p~wSPD-----------------G~~Laf~~~~~g~~~I~v~dl~~g~~~~---Lt~~~~~~~~p~wSpD---  381 (428)
T PRK01029        325 KYRNSSCPAWSPD-----------------GKKIAFCSVIKGVRQICVYDLATGRDYQ---LTTSPENKESPSWAID---  381 (428)
T ss_pred             CCCCccceeECCC-----------------CCEEEEEEcCCCCcEEEEEECCCCCeEE---ccCCCCCccceEECCC---
Confidence            4445667889997                 4556554432   368999998876433   2222334677899996   


Q ss_pred             CccEEEEEe-C--CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762         235 SKCMIASCS-Q--DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       235 ~~~~l~s~s-~--D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg  280 (318)
                       |+.|+..+ .  ...|.++++.+..   ...+......+...+|+|-.
T Consensus       382 -G~~L~f~~~~~g~~~L~~vdl~~g~---~~~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        382 -SLHLVYSAGNSNESELYLISLITKK---TRKIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             -CCEEEEEECCCCCceEEEEECCCCC---EEEeecCCCcccCceecCCC
Confidence             66665433 2  3567788876643   22233333456677888754

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=4.7e-08  Score=90.91  Aligned_cols=219  Identities=16%  Similarity=0.128  Sum_probs=121.5

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SC   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~   86 (318)
                      .|...+...+|+|||++|+..+.+   ..|.+||+...           .. ..+....+.+....|++  +|+.|+ +.
T Consensus       196 ~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g-----------~~-~~l~~~~g~~~~~~~Sp--DG~~la~~~  261 (430)
T PRK00178        196 QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTG-----------RR-EQITNFEGLNGAPAWSP--DGSKLAFVL  261 (430)
T ss_pred             cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCC-----------CE-EEccCCCCCcCCeEECC--CCCEEEEEE
Confidence            466788899999999999876644   35778888632           11 22223334455688974  477776 55


Q ss_pred             ECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          87 SYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        87 s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      +.++  .|.+||+.++....   +..+........|+|++  ..++ +...++...+|.......  +...+........
T Consensus       262 ~~~g~~~Iy~~d~~~~~~~~---lt~~~~~~~~~~~spDg--~~i~f~s~~~g~~~iy~~d~~~g--~~~~lt~~~~~~~  334 (430)
T PRK00178        262 SKDGNPEIYVMDLASRQLSR---VTNHPAIDTEPFWGKDG--RTLYFTSDRGGKPQIYKVNVNGG--RAERVTFVGNYNA  334 (430)
T ss_pred             ccCCCceEEEEECCCCCeEE---cccCCCCcCCeEECCCC--CEEEEEECCCCCceEEEEECCCC--CEEEeecCCCCcc
Confidence            5555  57777888765332   33444556678899984  4444 333444434443322221  1222221112233


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecC-CC--eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DN--LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~--~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ...|+|+                 +++|+..+. ++  .|.++|+.+++......  .  .......|+|+    |+.|+
T Consensus       335 ~~~~Spd-----------------g~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~--~--~~~~~p~~spd----g~~i~  389 (430)
T PRK00178        335 RPRLSAD-----------------GKTLVMVHRQDGNFHVAAQDLQRGSVRILTD--T--SLDESPSVAPN----GTMLI  389 (430)
T ss_pred             ceEECCC-----------------CCEEEEEEccCCceEEEEEECCCCCEEEccC--C--CCCCCceECCC----CCEEE
Confidence            4678886                 345555443 33  47888988775432221  1  12235689996    66666


Q ss_pred             EEeCC-C--eEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         241 SCSQD-R--KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       241 s~s~D-~--~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      -.+.+ +  .|.+.+..+..   ...+......+...+|+|
T Consensus       390 ~~~~~~g~~~l~~~~~~g~~---~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        390 YATRQQGRGVLMLVSINGRV---RLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             EEEecCCceEEEEEECCCCc---eEECcCCCCCcCCCccCC
Confidence            55543 3  35555654322   223333345566777776

>KOG1409|consensus

Probab=99.11  E-value=7.6e-09  Score=88.51  Aligned_cols=204  Identities=22%  Similarity=0.328  Sum_probs=140.7

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ..+++++.+.+...+|+.|-..|++.=+.+....+       +...++.+..|...|..+.|+.+  .+.++|.+.|+-+
T Consensus        68 P~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfn-------km~~~r~~~~h~~~v~~~if~~~--~e~V~s~~~dk~~  138 (404)
T KOG1409|consen   68 PSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFN-------KMTFLKDYLAHQARVSAIVFSLT--HEWVLSTGKDKQF  138 (404)
T ss_pred             CCCceEeeeeccceEEEEEEecceEEEEEhhhhhh-------hcchhhhhhhhhcceeeEEecCC--ceeEEEeccccce
Confidence            56788899999999999999999998887753211       23456778899999999999754  6899999999876


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      .---.+.+...--+.+..       .+-.++-.-.+.-.|...+.|.+..+....- ..+..+.+|..++.++.|.|.. 
T Consensus       139 ~~hc~e~~~~lg~Y~~~~-------~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~-~~i~~~~~h~~~~~~l~Wd~~~-  209 (404)
T KOG1409|consen  139 AWHCTESGNRLGGYNFET-------PASALQFDALYAFVGDHSGQITMLKLEQNGC-QLITTFNGHTGEVTCLKWDPGQ-  209 (404)
T ss_pred             EEEeeccCCcccceEeec-------cCCCCceeeEEEEecccccceEEEEEeecCC-ceEEEEcCcccceEEEEEcCCC-
Confidence            422223222111111110       0000100011333455556666655533321 2345667999999999999862 


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                      ..|.+|.+|..|-+||+-.++. ...++.+|...|..++..+.    -.+|.|++.|+.|-+|+
T Consensus       210 ----------------~~LfSg~~d~~vi~wdigg~~g-~~~el~gh~~kV~~l~~~~~----t~~l~S~~edg~i~~w~  268 (404)
T KOG1409|consen  210 ----------------RLLFSGASDHSVIMWDIGGRKG-TAYELQGHNDKVQALSYAQH----TRQLISCGEDGGIVVWN  268 (404)
T ss_pred             ----------------cEEEeccccCceEEEeccCCcc-eeeeeccchhhhhhhhhhhh----heeeeeccCCCeEEEEe
Confidence                            5799999999999999876553 45677899999999999885    67899999999999998


Q ss_pred             cCC
Q psy2762         253 SND  255 (318)
Q Consensus       253 ~~~  255 (318)
                      -..
T Consensus       269 mn~  271 (404)
T KOG1409|consen  269 MNV  271 (404)
T ss_pred             ccc
Confidence            544

>KOG4547|consensus

Probab=99.11  E-value=6.4e-08  Score=88.17  Aligned_cols=205  Identities=16%  Similarity=0.215  Sum_probs=136.2

Q ss_pred             ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEE--EecC------------CCCCcEEEE
Q psy2762          21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQV--AWAH------------PQFGTLLAS   85 (318)
Q Consensus        21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v--~~~~------------~~~~~~las   85 (318)
                      ++|...|+|....||.+||||.......     +...++..+.+- ...+|.+  ..++            ..+-..++-
T Consensus         1 ~~~~~~~~A~~~~~g~l~iw~t~~~~~~-----~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvl   75 (541)
T KOG4547|consen    1 SPPALDYFALSTGDGRLRIWDTAKNQLQ-----QEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVL   75 (541)
T ss_pred             CCchhheEeecCCCCeEEEEEccCceee-----eeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEe
Confidence            3566789999999999999998632100     000011111110 0111111  1111            112357778


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      |-..|.|.+++...++......-..|.+.|+++.++.+  --.+-+++.|..+..|++....   ..+....-...+.++
T Consensus        76 gt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~--~~ciyS~~ad~~v~~~~~~~~~---~~~~~~~~~~~~~sl  150 (541)
T KOG4547|consen   76 GTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQR--LGCIYSVGADLKVVYILEKEKV---IIRIWKEQKPLVSSL  150 (541)
T ss_pred             ecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccc--cCceEecCCceeEEEEecccce---eeeeeccCCCccceE
Confidence            88899999999888875555555679999999998876  4568899999999999874322   122333445556777


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC--CCccEEEEEe
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG--LSKCMIASCS  243 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~--~~~~~l~s~s  243 (318)
                      ..+|+                 +..++++|.  .|++||.++++.  ..+|+||..+|++++|--...  ....+|.+..
T Consensus       151 ~is~D-----------------~~~l~~as~--~ik~~~~~~kev--v~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~  209 (541)
T KOG4547|consen  151 CISPD-----------------GKILLTASR--QIKVLDIETKEV--VITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAA  209 (541)
T ss_pred             EEcCC-----------------CCEEEeccc--eEEEEEccCceE--EEEecCCCcceEEEEEEEeccccccceeeeccc
Confidence            78886                 456787774  799999998875  467899999999999987521  1244666677


Q ss_pred             CCCeEEEEEcCCC
Q psy2762         244 QDRKVIIWTSNDY  256 (318)
Q Consensus       244 ~D~~i~vw~~~~~  256 (318)
                      .++-+.+|-.+..
T Consensus       210 ~~r~i~~w~v~~~  222 (541)
T KOG4547|consen  210 AERGITVWVVEKE  222 (541)
T ss_pred             cccceeEEEEEcc
Confidence            7888999976653

>KOG2041|consensus

Probab=99.10  E-value=2.2e-08  Score=93.15  Aligned_cols=279  Identities=18%  Similarity=0.282  Sum_probs=173.8

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCC----CcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS----QKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      -....+.++.|+....||+.||.||.++|-.+.....+....+    .+-..-.++.||++.|..+.|+.  ..+.|-|+
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe--~~QKLTtS   89 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE--NNQKLTTS   89 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc--cccccccc
Confidence            3456889999999999999999999999998863211111000    01112367899999999999963  47889999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      ..+|.|.||=+-.+.|.....-..-++.|.+++|+.+  +..++..-.||.|++=.+ .++..|- +.+++.  -..-+.
T Consensus        90 Dt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~d--G~kIcIvYeDGavIVGsv-dGNRIwg-KeLkg~--~l~hv~  163 (1189)
T KOG2041|consen   90 DTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLD--GTKICIVYEDGAVIVGSV-DGNRIWG-KELKGQ--LLAHVL  163 (1189)
T ss_pred             CCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCC--CcEEEEEEccCCEEEEee-ccceecc-hhcchh--ecccee
Confidence            9999999998877654221111224567889999998  666777777887766433 2222221 111110  012334


Q ss_pred             eCCCCCCCc---------c-----------------------------c-c-----ccCCCCCCccceEEEecCCCeEEE
Q psy2762         167 WGPGIGSLS---------E-----------------------------L-D-----LKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       167 ~~p~~~~~~---------~-----------------------------~-~-----~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                      |+|+.....         .                             + .     ....+.+..-..||.+-.+|.+.|
T Consensus       164 ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~Qi  243 (1189)
T KOG2041|consen  164 WSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQI  243 (1189)
T ss_pred             ecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehh
Confidence            555421100         0                             0 0     000111111236888888888888


Q ss_pred             EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC---------eEEEEEcCCCcceeeEEeeecCCcEEE
Q psy2762         203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR---------KVIIWTSNDYVTWTPFIMNTFDDVVWN  273 (318)
Q Consensus       203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~---------~i~vw~~~~~~~~~~~~~~~~~~~v~~  273 (318)
                      -+-.+.+ .+...-.+  -.|....|+|+    |..||.+|.|.         .|.+|..-+..   ...+.....-|.+
T Consensus       244 MR~eND~-~Pvv~dtg--m~~vgakWnh~----G~vLAvcG~~~da~~~~d~n~v~Fysp~G~i---~gtlkvpg~~It~  313 (1189)
T KOG2041|consen  244 MRSENDP-EPVVVDTG--MKIVGAKWNHN----GAVLAVCGNDSDADEPTDSNKVHFYSPYGHI---VGTLKVPGSCITG  313 (1189)
T ss_pred             hhhcCCC-CCeEEecc--cEeecceecCC----CcEEEEccCcccccCccccceEEEeccchhh---eEEEecCCceeee
Confidence            6544321 12222122  45788999995    89999999764         46666543322   1234444567999


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEee
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      ++|--.|-.+|.+- |+.+.+=+++...+|.-.++
T Consensus       314 lsWEg~gLriA~Av-dsfiyfanIRP~ykWgy~e~  347 (1189)
T KOG2041|consen  314 LSWEGTGLRIAIAV-DSFIYFANIRPEYKWGYIEE  347 (1189)
T ss_pred             eEEcCCceEEEEEe-cceEEEEeecccceEEEeee
Confidence            99998887777664 78999989999999975443

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=9.2e-08  Score=89.24  Aligned_cols=219  Identities=13%  Similarity=0.077  Sum_probs=117.9

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCC-C--cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSD-H--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SC   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D-~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~   86 (318)
                      .+...+....|+|||++|+..+.+ +  .|.+||+...         ....+..+.+   ......|++  +|+.|+ +.
T Consensus       215 ~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg---------~~~~lt~~~g---~~~~~~wSP--DG~~La~~~  280 (448)
T PRK04792        215 RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQ---------VREKVTSFPG---INGAPRFSP--DGKKLALVL  280 (448)
T ss_pred             cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCC---------CeEEecCCCC---CcCCeeECC--CCCEEEEEE
Confidence            345677889999999998876543 3  4677777522         1123333333   344678974  477665 45


Q ss_pred             ECCCe--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          87 SYDRK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        87 s~Dg~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      +.++.  |.++|+.+++...   +..+.......+|+|++  ..++ +...++...+|.......  +...+........
T Consensus       281 ~~~g~~~Iy~~dl~tg~~~~---lt~~~~~~~~p~wSpDG--~~I~f~s~~~g~~~Iy~~dl~~g--~~~~Lt~~g~~~~  353 (448)
T PRK04792        281 SKDGQPEIYVVDIATKALTR---ITRHRAIDTEPSWHPDG--KSLIFTSERGGKPQIYRVNLASG--KVSRLTFEGEQNL  353 (448)
T ss_pred             eCCCCeEEEEEECCCCCeEE---CccCCCCccceEECCCC--CEEEEEECCCCCceEEEEECCCC--CEEEEecCCCCCc
Confidence            66775  6666777665322   33344556778999984  4444 444455545554332222  1223321112223


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecC-CCe--EEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNL--IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~--i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ..+|+|+                 +++|+..+. ++.  |.++|+.+++...   +... .......|+|+    |.+|+
T Consensus       354 ~~~~SpD-----------------G~~l~~~~~~~g~~~I~~~dl~~g~~~~---lt~~-~~d~~ps~spd----G~~I~  408 (448)
T PRK04792        354 GGSITPD-----------------GRSMIMVNRTNGKFNIARQDLETGAMQV---LTST-RLDESPSVAPN----GTMVI  408 (448)
T ss_pred             CeeECCC-----------------CCEEEEEEecCCceEEEEEECCCCCeEE---ccCC-CCCCCceECCC----CCEEE
Confidence            4678887                 345544433 444  4445766665322   2211 11224578886    56555


Q ss_pred             EEe-CCCe--EEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         241 SCS-QDRK--VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       241 s~s-~D~~--i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      ..+ .++.  +.+++..+..   ...+....+.+...+|+|
T Consensus       409 ~~~~~~g~~~l~~~~~~G~~---~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        409 YSTTYQGKQVLAAVSIDGRF---KARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             EEEecCCceEEEEEECCCCc---eEECcCCCCCcCCCccCC
Confidence            544 4444  5556664432   233333445567778887

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=1.7e-07  Score=87.26  Aligned_cols=204  Identities=16%  Similarity=0.185  Sum_probs=120.5

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECC---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecC
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYD---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSD  135 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~D---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d  135 (318)
                      ..+..+...+....|++  +|+.|+..+.+   ..|.+||+.++.......   ..+.+...+|+|+  +..++ +.+.+
T Consensus       192 ~~l~~~~~~~~~p~wSp--DG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~---~~g~~~~~~~SpD--G~~la~~~~~~  264 (430)
T PRK00178        192 VTLLQSREPILSPRWSP--DGKRIAYVSFEQKRPRIFVQNLDTGRREQITN---FEGLNGAPAWSPD--GSKLAFVLSKD  264 (430)
T ss_pred             eEEecCCCceeeeeECC--CCCEEEEEEcCCCCCEEEEEECCCCCEEEccC---CCCCcCCeEECCC--CCEEEEEEccC
Confidence            44556777899999974  58888877654   358888998776433322   2344557899998  44444 55555


Q ss_pred             C--eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCC--eEEEEEccCCeE
Q psy2762         136 G--TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDN--LIKIWKQEGDKW  210 (318)
Q Consensus       136 ~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~--~i~iwd~~~~~~  210 (318)
                      +  .|.++|...+    ....+..+........|+|+                 +..|+..+ .++  .|+++++.+++.
T Consensus       265 g~~~Iy~~d~~~~----~~~~lt~~~~~~~~~~~spD-----------------g~~i~f~s~~~g~~~iy~~d~~~g~~  323 (430)
T PRK00178        265 GNPEIYVMDLASR----QLSRVTNHPAIDTEPFWGKD-----------------GRTLYFTSDRGGKPQIYKVNVNGGRA  323 (430)
T ss_pred             CCceEEEEECCCC----CeEEcccCCCCcCCeEECCC-----------------CCEEEEEECCCCCceEEEEECCCCCE
Confidence            5  4555665322    23344444444556789987                 34444433 333  466667766654


Q ss_pred             EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-C--eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe
Q psy2762         211 IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-R--KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       211 ~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~--~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      .+. .+.+.  ......|+|+    +..|+..+.+ +  .|.++|+.+..   ...+.. .....+..|+|||+.|+-++
T Consensus       324 ~~l-t~~~~--~~~~~~~Spd----g~~i~~~~~~~~~~~l~~~dl~tg~---~~~lt~-~~~~~~p~~spdg~~i~~~~  392 (430)
T PRK00178        324 ERV-TFVGN--YNARPRLSAD----GKTLVMVHRQDGNFHVAAQDLQRGS---VRILTD-TSLDESPSVAPNGTMLIYAT  392 (430)
T ss_pred             EEe-ecCCC--CccceEECCC----CCEEEEEEccCCceEEEEEECCCCC---EEEccC-CCCCCCceECCCCCEEEEEE
Confidence            332 22222  2345689996    6677666643 3  47788877643   122221 11223568999999988776


Q ss_pred             C-CCeEEEEEECCCCc
Q psy2762         288 G-DNSVSLWKENTDGA  302 (318)
Q Consensus       288 ~-D~~v~iW~~~~~~~  302 (318)
                      . ++.-+||-++..|.
T Consensus       393 ~~~g~~~l~~~~~~g~  408 (430)
T PRK00178        393 RQQGRGVLMLVSINGR  408 (430)
T ss_pred             ecCCceEEEEEECCCC
Confidence            4 34455555555444

>KOG1064|consensus

Probab=99.06  E-value=9.2e-10  Score=110.79  Aligned_cols=191  Identities=14%  Similarity=0.287  Sum_probs=141.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      -|-.+|.++.-+|.-.+-+||+.||.|++|....+           ..+..++ +.+..|+.+.|++  .|+.+..+..|
T Consensus      2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~-----------~~v~~~rt~g~s~vtr~~f~~--qGnk~~i~d~d 2272 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHG-----------QQVVCFRTAGNSRVTRSRFNH--QGNKFGIVDGD 2272 (2439)
T ss_pred             cccCceeeecCCCCCceEEecCCCceEEEEeccCC-----------CeEEEeeccCcchhhhhhhcc--cCCceeeeccC
Confidence            35678888888899999999999999999988632           2233332 3348899999975  58999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEe---ecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACG---SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg---s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      |.+.+|.+...   +....+-|......+.|-..    ++++.   +.++.+.+||.......+.+.  ..|..+++.++
T Consensus      2273 g~l~l~q~~pk---~~~s~qchnk~~~Df~Fi~s----~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~ 2343 (2439)
T KOG1064|consen 2273 GDLSLWQASPK---PYTSWQCHNKALSDFRFIGS----LLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLA 2343 (2439)
T ss_pred             CceeecccCCc---ceeccccCCccccceeeeeh----hhhccccCCCCCcccchhcccCcccceee--eecCCCceEEE
Confidence            99999987743   44445567777777877752    34544   346789999975444333333  68999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      +-|.                 .+.|++||.+|-|.+||.+.+++.  +.++     .    +. .    ..+|++++..|
T Consensus      2344 ~~P~-----------------~qllisggr~G~v~l~D~rqrql~--h~~~-----~----~~-~----~~~f~~~ss~g 2390 (2439)
T KOG1064|consen 2344 YAPK-----------------HQLLISGGRKGEVCLFDIRQRQLR--HTFQ-----A----LD-T----REYFVTGSSEG 2390 (2439)
T ss_pred             EcCc-----------------ceEEEecCCcCcEEEeehHHHHHH--HHhh-----h----hh-h----hheeeccCccc
Confidence            9996                 468999999999999998865431  2222     1    22 1    56899999999


Q ss_pred             eEEEEEcCCC
Q psy2762         247 KVIIWTSNDY  256 (318)
Q Consensus       247 ~i~vw~~~~~  256 (318)
                      +++||++...
T Consensus      2391 ~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2391 NIKIWRLSEF 2400 (2439)
T ss_pred             ceEEEEcccc
Confidence            9999998764

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.04  E-value=5.1e-07  Score=83.70  Aligned_cols=211  Identities=18%  Similarity=0.155  Sum_probs=114.6

Q ss_pred             ecccccCeEEEEecCCCCCcE--E-EEEECCCe--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cC
Q psy2762          62 LKGHSGPVWQVAWAHPQFGTL--L-ASCSYDRK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SD  135 (318)
Q Consensus        62 ~~~h~~~V~~v~~~~~~~~~~--l-as~s~Dg~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d  135 (318)
                      +......+..-+|++  ||+.  + +....++.  |-+.++.+++..++..+   .+.....+|+||  +..|+..+ .+
T Consensus       180 lt~~~~~~~sP~wSP--DG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~---~g~~~~p~wSPD--G~~Laf~s~~~  252 (428)
T PRK01029        180 LTQEHSLSITPTWMH--IGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILAL---QGNQLMPTFSPR--KKLLAFISDRY  252 (428)
T ss_pred             cccCCCCcccceEcc--CCCceEEEEEEccCCCceEEEEECCCCCceEeecC---CCCccceEECCC--CCEEEEEECCC
Confidence            444555667779985  4654  3 24444554  44457776654444333   334456899999  54455433 23


Q ss_pred             C----eEEEEEeecCCCCcceeeeccc-ccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEc--cC
Q psy2762         136 G----TISFLTYMSDTNSWESRKIAAH-TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQ--EG  207 (318)
Q Consensus       136 ~----~i~i~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~--~~  207 (318)
                      +    .+.+|+...+.. .....+... .......+|+|+                 +++|+..+ .++..+||.+  ..
T Consensus       253 g~~di~~~~~~~~~g~~-g~~~~lt~~~~~~~~~p~wSPD-----------------G~~Laf~s~~~g~~~ly~~~~~~  314 (428)
T PRK01029        253 GNPDLFIQSFSLETGAI-GKPRRLLNEAFGTQGNPSFSPD-----------------GTRLVFVSNKDGRPRIYIMQIDP  314 (428)
T ss_pred             CCcceeEEEeecccCCC-CcceEeecCCCCCcCCeEECCC-----------------CCEEEEEECCCCCceEEEEECcc
Confidence            3    223344432110 112233322 223356789997                 45566544 5666666653  21


Q ss_pred             CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEE
Q psy2762         208 DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT  284 (318)
Q Consensus       208 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~  284 (318)
                      ... ....+..+...+....|||+    |+.|+..+.+   ..|.+||+.+...   ..+......+.+..|+|||+.|+
T Consensus       315 ~g~-~~~~lt~~~~~~~~p~wSPD----G~~Laf~~~~~g~~~I~v~dl~~g~~---~~Lt~~~~~~~~p~wSpDG~~L~  386 (428)
T PRK01029        315 EGQ-SPRLLTKKYRNSSCPAWSPD----GKKIAFCSVIKGVRQICVYDLATGRD---YQLTTSPENKESPSWAIDSLHLV  386 (428)
T ss_pred             ccc-ceEEeccCCCCccceeECCC----CCEEEEEEcCCCCcEEEEEECCCCCe---EEccCCCCCccceEECCCCCEEE
Confidence            110 11223344455678899996    7777766553   4689999876542   22322233567899999999887


Q ss_pred             EEeC-C--CeEEEEEECCCCceEEE
Q psy2762         285 VSCG-D--NSVSLWKENTDGAWQCI  306 (318)
Q Consensus       285 s~~~-D--~~v~iW~~~~~~~~~~~  306 (318)
                      ..+. +  ..|.+|+++. ++...+
T Consensus       387 f~~~~~g~~~L~~vdl~~-g~~~~L  410 (428)
T PRK01029        387 YSAGNSNESELYLISLIT-KKTRKI  410 (428)
T ss_pred             EEECCCCCceEEEEECCC-CCEEEe
Confidence            5443 3  3566666544 344433

>KOG1354|consensus

Probab=99.02  E-value=2.5e-08  Score=85.43  Aligned_cols=212  Identities=17%  Similarity=0.244  Sum_probs=130.7

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEEEEEecCC------------CcCeEEEEeeCCCCCcEEE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFKYYEYNNH------------DSSVNSIAWAPKEFGLILA  130 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~~~~~~~h------------~~~v~~v~~~p~~~~~~la  130 (318)
                      .+.|.++.|.+  .|.+||+|..+|.|-++.-...   ...-...+..|            ...|+.+.|.++.....++
T Consensus        25 adiis~vef~~--~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   25 ADIISAVEFDH--YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             hcceeeEEeec--ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            45678899975  5999999999999999964322   11112223333            2478999999887666777


Q ss_pred             EeecCCeEEEEEeecCCCCcceeee--c-------------------------------ccccccceeeeCCCCCCCccc
Q psy2762         131 CGSSDGTISFLTYMSDTNSWESRKI--A-------------------------------AHTIGCNAVSWGPGIGSLSEL  177 (318)
Q Consensus       131 sgs~d~~i~i~~~~~~~~~~~~~~~--~-------------------------------~h~~~v~~~~~~p~~~~~~~~  177 (318)
                      ..+.|++|++|.+...........+  .                               +|+-.+++++++.+       
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD-------  175 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSD-------  175 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCc-------
Confidence            7889999999987544321100000  0                               12222222222221       


Q ss_pred             cccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEE-----cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETK-----LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       178 ~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~-----~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                 +.......|=.|.+|+++-- +...+..     ++.-++-|++-.|+|.   .-..|+-.|.-|+||+-
T Consensus       176 -----------~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~---~cn~f~YSSSKGtIrLc  241 (433)
T KOG1354|consen  176 -----------KETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPH---HCNVFVYSSSKGTIRLC  241 (433)
T ss_pred             -----------cceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHh---HccEEEEecCCCcEEEe
Confidence                       22344566778999987632 1112222     3333456888899997   34578888889999999


Q ss_pred             EcCCCcce----eeEEe----------eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         252 TSNDYVTW----TPFIM----------NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       252 ~~~~~~~~----~~~~~----------~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |.+....+    ...+.          ...-..|..|.|++.|+++++-. --+|+|||++-..
T Consensus       242 DmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~  304 (433)
T KOG1354|consen  242 DMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEA  304 (433)
T ss_pred             echhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccC
Confidence            98742200    00000          01124588999999999997653 3799999996644

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.01  E-value=1.2e-06  Score=89.53  Aligned_cols=245  Identities=11%  Similarity=0.037  Sum_probs=146.6

Q ss_pred             eeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc--------------cccCeEEEEecCCCCCcE
Q psy2762          18 DAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--------------HSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus        18 ~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--------------h~~~V~~v~~~~~~~~~~   82 (318)
                      .+++++ +|.++++-+.++.|++||...            ..+..+.+              +-..-..+++.+  +++.
T Consensus       572 gvavd~~~g~lyVaDs~n~rI~v~d~~G------------~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~--~gn~  637 (1057)
T PLN02919        572 KLAIDLLNNRLFISDSNHNRIVVTDLDG------------NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNA--KKNL  637 (1057)
T ss_pred             eEEEECCCCeEEEEECCCCeEEEEeCCC------------CEEEEEccCCCcCCCCCchhccccCCCcEEEEeC--CCCE
Confidence            477876 467788888889999999752            22222211              112245677753  3555


Q ss_pred             EEEEE-CCCeEEEEeCCCCcEEEEEEecCC---------------CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC
Q psy2762          83 LASCS-YDRKVIIWRGDNGNWFKYYEYNNH---------------DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD  146 (318)
Q Consensus        83 las~s-~Dg~v~vWd~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~  146 (318)
                      |+.+. ..+.|+++|..++.. .+..-.+.               -.....|+++|++ +.++++...++.|++|+...+
T Consensus       638 LYVaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~-g~LyVad~~~~~I~v~d~~~g  715 (1057)
T PLN02919        638 LYVADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVN-EKVYIAMAGQHQIWEYNISDG  715 (1057)
T ss_pred             EEEEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCC-CeEEEEECCCCeEEEEECCCC
Confidence            55544 457899999876532 22111000               0123578999953 667778788889999886432


Q ss_pred             CCCcceeeecc---------c------ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         147 TNSWESRKIAA---------H------TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       147 ~~~~~~~~~~~---------h------~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      .    ...+.+         +      -.....++++|+.                ...+++-+.++.|++||+.++...
T Consensus       716 ~----v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG----------------~~LYVADs~n~~Irv~D~~tg~~~  775 (1057)
T PLN02919        716 V----TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDL----------------KELYIADSESSSIRALDLKTGGSR  775 (1057)
T ss_pred             e----EEEEecCCccccCCCCccccccccCccEEEEeCCC----------------CEEEEEECCCCeEEEEECCCCcEE
Confidence            1    111111         0      0122345666642                125567777889999998765321


Q ss_pred             EEE-----------Eccc--------CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE---------
Q psy2762         212 EET-----------KLEN--------HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI---------  263 (318)
Q Consensus       212 ~~~-----------~~~~--------h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~---------  263 (318)
                      ...           .+..        .-.....++++|+    |.++++-+.++.|++||..+.......-         
T Consensus       776 ~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d----G~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG  851 (1057)
T PLN02919        776 LLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD----GQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDG  851 (1057)
T ss_pred             EEEecccccCcccccccCCCCchhhhhccCCceeeEeCC----CcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCC
Confidence            111           0000        0112357888885    6788888899999999987643111100         


Q ss_pred             --eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         264 --MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       264 --~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                        ....-.....++++|+|+.+++-+.+++||+|+.+++..
T Consensus       852 ~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        852 KALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             cccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence              001112467899999999988888999999999877543

>KOG4497|consensus

Probab=99.01  E-value=1.6e-08  Score=86.19  Aligned_cols=256  Identities=16%  Similarity=0.282  Sum_probs=148.5

Q ss_pred             eeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC-cEEEEEECCCeE
Q psy2762          15 MIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG-TLLASCSYDRKV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~-~~las~s~Dg~v   92 (318)
                      .|.-+.+..|..+++. ...|+.|.+|++..+           .-...+....+.+.+++|++  +| .+|.+...|-.|
T Consensus        50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qp-----------ew~ckIdeg~agls~~~WSP--dgrhiL~tseF~lri  116 (447)
T KOG4497|consen   50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQP-----------EWYCKIDEGQAGLSSISWSP--DGRHILLTSEFDLRI  116 (447)
T ss_pred             HhhheeeeccceeeeeeeeccceEEEEEeecc-----------eeEEEeccCCCcceeeeECC--CcceEeeeecceeEE
Confidence            3445677777777655 467889999999733           23445666778889999985  46 677788889999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-eeecccccccceeeeCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~  171 (318)
                      .||.+.+.+...   ++..+..+..++|+|+  +++.+..+.-..--...+. ..+.|.+ +..+..+.....+.|+|++
T Consensus       117 TVWSL~t~~~~~---~~~pK~~~kg~~f~~d--g~f~ai~sRrDCkdyv~i~-~c~~W~ll~~f~~dT~DltgieWsPdg  190 (447)
T KOG4497|consen  117 TVWSLNTQKGYL---LPHPKTNVKGYAFHPD--GQFCAILSRRDCKDYVQIS-SCKAWILLKEFKLDTIDLTGIEWSPDG  190 (447)
T ss_pred             EEEEeccceeEE---ecccccCceeEEECCC--CceeeeeecccHHHHHHHH-hhHHHHHHHhcCCCcccccCceECCCC
Confidence            999987754322   3334556789999999  6666655432100000000 0011211 1112233344556677764


Q ss_pred             CCCcccc---------------ccCCCCCCccceEEEecCCCeEEEEEccC----Ce-----------------------
Q psy2762         172 GSLSELD---------------LKGSKLGGVAKRLVSGGCDNLIKIWKQEG----DK-----------------------  209 (318)
Q Consensus       172 ~~~~~~~---------------~~~~~~~~~~~~lasgs~d~~i~iwd~~~----~~-----------------------  209 (318)
                      .-+...+               +.......-++.||.|+.|+++||.+--+    ++                       
T Consensus       191 ~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~  270 (447)
T KOG4497|consen  191 NWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIV  270 (447)
T ss_pred             cEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchh
Confidence            2211110               00001112247899999999999854211    00                       


Q ss_pred             -------------------------------EEEEEEc------ccCCCCeeEEEEccCCCCCccEEEEEeC--CCeEEE
Q psy2762         210 -------------------------------WIEETKL------ENHSDWVRDVAWAPSWGLSKCMIASCSQ--DRKVII  250 (318)
Q Consensus       210 -------------------------------~~~~~~~------~~h~~~V~~v~~sp~~~~~~~~l~s~s~--D~~i~v  250 (318)
                                                     ++..+.+      ......+--++||++    .++++|--+  -..+.+
T Consensus       271 ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~D----s~y~aTrnd~~PnalW~  346 (447)
T KOG4497|consen  271 QLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCD----STYAATRNDKYPNALWL  346 (447)
T ss_pred             hhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCC----ceEEeeecCCCCceEEE
Confidence                                           0000111      112233556788885    777777643  256899


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ||+++...  ...+ .-..+|....|.|....|+.....-.+.+|.
T Consensus       347 Wdlq~l~l--~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~  389 (447)
T KOG4497|consen  347 WDLQNLKL--HAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWA  389 (447)
T ss_pred             Eechhhhh--hhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEc
Confidence            99876431  1111 1135799999999988887776666788885

>KOG1064|consensus

Probab=98.99  E-value=4.6e-09  Score=105.95  Aligned_cols=196  Identities=14%  Similarity=0.218  Sum_probs=137.7

Q ss_pred             cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762          63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT  142 (318)
Q Consensus        63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~  142 (318)
                      +-|-..|.++. +||. ..+.+||+.||.|++|.-..++.+..+...+. +.|..+.|+.+  |.-+..+..||.+.+|.
T Consensus      2205 k~~v~~v~r~~-sHp~-~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~q--Gnk~~i~d~dg~l~l~q 2279 (2439)
T KOG1064|consen 2205 KHPVENVRRMT-SHPS-DPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQ--GNKFGIVDGDGDLSLWQ 2279 (2439)
T ss_pred             ecccCceeeec-CCCC-CceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhccc--CCceeeeccCCceeecc
Confidence            34455666666 4664 45677999999999999877776666665554 88999999987  55678889999999998


Q ss_pred             eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEe---cCCCeEEEEEccCCeE-EEEEEccc
Q psy2762         143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG---GCDNLIKIWKQEGDKW-IEETKLEN  218 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg---s~d~~i~iwd~~~~~~-~~~~~~~~  218 (318)
                      ..+.    .......|......+.|-.                   ..++++   +.++.+-+||.....- ....  ..
T Consensus      2280 ~~pk----~~~s~qchnk~~~Df~Fi~-------------------s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~ 2334 (2439)
T KOG1064|consen 2280 ASPK----PYTSWQCHNKALSDFRFIG-------------------SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TC 2334 (2439)
T ss_pred             cCCc----ceeccccCCccccceeeee-------------------hhhhccccCCCCCcccchhcccCcccceee--ee
Confidence            6411    1223345666655555532                   123433   4567899999543211 1122  67


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      |.+.++++.+.|.    .+.|+|||.+|.|+|||++...     +...++.      +. ...++++++..|.++||+++
T Consensus      2335 H~~gaT~l~~~P~----~qllisggr~G~v~l~D~rqrq-----l~h~~~~------~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2335 HDGGATVLAYAPK----HQLLISGGRKGEVCLFDIRQRQ-----LRHTFQA------LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred             cCCCceEEEEcCc----ceEEEecCCcCcEEEeehHHHH-----HHHHhhh------hh-hhheeeccCcccceEEEEcc
Confidence            9999999999996    7899999999999999987532     1222222      44 56789999999999999988


Q ss_pred             CCCceE
Q psy2762         299 TDGAWQ  304 (318)
Q Consensus       299 ~~~~~~  304 (318)
                      ..+...
T Consensus      2399 ~~~ll~ 2404 (2439)
T KOG1064|consen 2399 EFGLLH 2404 (2439)
T ss_pred             ccchhh
Confidence            876543

>KOG4547|consensus

Probab=98.97  E-value=1.6e-07  Score=85.70  Aligned_cols=191  Identities=12%  Similarity=0.182  Sum_probs=134.9

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeC--CC----------------CCcEEEEeecCCeEEE
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAP--KE----------------FGLILACGSSDGTISF  140 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p--~~----------------~~~~lasgs~d~~i~i  140 (318)
                      ..+||....||.+|+|+...++..+-+. .....+...+..|.-  +.                ....++-|...|.|.+
T Consensus         5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~   84 (541)
T KOG4547|consen    5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL   84 (541)
T ss_pred             hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence            6899999999999999987765322111 111234455555541  10                1347777888888888


Q ss_pred             EEeecCCCCcceeee-cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         141 LTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      ++...+.  ...+.. ..|..+|+++.++..                 ...|.+++.|+.+-.|+.+.....  .....-
T Consensus        85 ys~~~g~--it~~~st~~h~~~v~~~~~~~~-----------------~~ciyS~~ad~~v~~~~~~~~~~~--~~~~~~  143 (541)
T KOG4547|consen   85 YSVAGGE--ITAKLSTDKHYGNVNEILDAQR-----------------LGCIYSVGADLKVVYILEKEKVII--RIWKEQ  143 (541)
T ss_pred             EEecCCe--EEEEEecCCCCCcceeeecccc-----------------cCceEecCCceeEEEEecccceee--eeeccC
Confidence            8764332  111112 268888988887764                 346999999999999998876543  334566


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC-----CCEEEE-EeCCCeEE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT-----GDILTV-SCGDNSVS  293 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd-----g~~l~s-~~~D~~v~  293 (318)
                      +..+.+++.+|+    +..|+++|  +.|++|+.++..  ....+.+|..+|.+++|-.+     |.++++ +..+.-+.
T Consensus       144 ~~~~~sl~is~D----~~~l~~as--~~ik~~~~~~ke--vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~  215 (541)
T KOG4547|consen  144 KPLVSSLCISPD----GKILLTAS--RQIKVLDIETKE--VVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGIT  215 (541)
T ss_pred             CCccceEEEcCC----CCEEEecc--ceEEEEEccCce--EEEEecCCCcceEEEEEEEeccccccceeeecccccccee
Confidence            677899999996    78888887  889999998754  34456789999999999987     666554 45677888


Q ss_pred             EEEECC
Q psy2762         294 LWKENT  299 (318)
Q Consensus       294 iW~~~~  299 (318)
                      +|.++.
T Consensus       216 ~w~v~~  221 (541)
T KOG4547|consen  216 VWVVEK  221 (541)
T ss_pred             EEEEEc
Confidence            998765

>KOG2321|consensus

Probab=98.96  E-value=3.2e-08  Score=89.93  Aligned_cols=193  Identities=20%  Similarity=0.311  Sum_probs=129.8

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD   98 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~   98 (318)
                      ++++.-..-|..++....|.-+|++           .|..+..++.-.+.+++|..++  ...+||.|+.||.|..||..
T Consensus       139 m~y~~~scDly~~gsg~evYRlNLE-----------qGrfL~P~~~~~~~lN~v~in~--~hgLla~Gt~~g~VEfwDpR  205 (703)
T KOG2321|consen  139 MKYHKPSCDLYLVGSGSEVYRLNLE-----------QGRFLNPFETDSGELNVVSINE--EHGLLACGTEDGVVEFWDPR  205 (703)
T ss_pred             ccccCCCccEEEeecCcceEEEEcc-----------ccccccccccccccceeeeecC--ccceEEecccCceEEEecch
Confidence            4444322234444445566666776           3556777777789999999863  36789999999999999987


Q ss_pred             CCcEEEEEE----ecCCCc-----CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc--ccccceeee
Q psy2762          99 NGNWFKYYE----YNNHDS-----SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH--TIGCNAVSW  167 (318)
Q Consensus        99 ~~~~~~~~~----~~~h~~-----~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h--~~~v~~~~~  167 (318)
                      .........    +..|++     .|++++|..+  +..+++|+.+|.|.|||++...    ...++.|  ..++..+.|
T Consensus       206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~--gL~~aVGts~G~v~iyDLRa~~----pl~~kdh~~e~pi~~l~~  279 (703)
T KOG2321|consen  206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDD--GLHVAVGTSTGSVLIYDLRASK----PLLVKDHGYELPIKKLDW  279 (703)
T ss_pred             hhhhheeeecccccCCCccccccCcceEEEecCC--ceeEEeeccCCcEEEEEcccCC----ceeecccCCccceeeecc
Confidence            654322221    222333     3999999987  8899999999999999986543    2233444  456777777


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      -+...               ...++|.. ...++|||..+++..  ..++ ....++.+|+-|+    +.++.++-++..
T Consensus       280 ~~~~~---------------q~~v~S~D-k~~~kiWd~~~Gk~~--asiE-pt~~lND~C~~p~----sGm~f~Ane~~~  336 (703)
T KOG2321|consen  280 QDTDQ---------------QNKVVSMD-KRILKIWDECTGKPM--ASIE-PTSDLNDFCFVPG----SGMFFTANESSK  336 (703)
T ss_pred             cccCC---------------CceEEecc-hHHhhhcccccCCce--eecc-ccCCcCceeeecC----CceEEEecCCCc
Confidence            66421               23455443 357999998888643  3333 3445999999996    567888888887


Q ss_pred             EEEEEc
Q psy2762         248 VIIWTS  253 (318)
Q Consensus       248 i~vw~~  253 (318)
                      +..|=+
T Consensus       337 m~~yyi  342 (703)
T KOG2321|consen  337 MHTYYI  342 (703)
T ss_pred             ceeEEc
Confidence            777644

>KOG0309|consensus

Probab=98.95  E-value=4.2e-09  Score=98.06  Aligned_cols=220  Identities=20%  Similarity=0.269  Sum_probs=141.9

Q ss_pred             cceeecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      .+.....||...|+.+-|+|.. ..|++|+.|-.|..||+.++          ...+.....-...-..|.|+- .++..
T Consensus       105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp----------~~p~ys~~~w~s~asqVkwny-k~p~v  173 (1081)
T KOG0309|consen  105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSP----------HRPFYSTSSWRSAASQVKWNY-KDPNV  173 (1081)
T ss_pred             ceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCC----------CcceeeeecccccCceeeecc-cCcch
Confidence            4555678999999999999865 57999999999999999743          223444333333446788864 46777


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      ||+ +-.+.|.+||...+.. +...+++|...|+.++|+.-.. ..+.+.+.|++|++|++......+  .....-..++
T Consensus       174 las-shg~~i~vwd~r~gs~-pl~s~K~~vs~vn~~~fnr~~~-s~~~s~~~d~tvkfw~y~kSt~e~--~~~vtt~~pi  248 (1081)
T KOG0309|consen  174 LAS-SHGNDIFVWDLRKGST-PLCSLKGHVSSVNSIDFNRFKY-SEIMSSSNDGTVKFWDYSKSTTES--KRTVTTNFPI  248 (1081)
T ss_pred             hhh-ccCCceEEEeccCCCc-ceEEecccceeeehHHHhhhhh-hhhcccCCCCceeeeccccccccc--ceeccccCcc
Confidence            766 5678999999876643 3335667999999999987543 357788999999999985433211  1111222334


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE---------EccCCeEEEEEEcccCCCCeeEEEEccCC-
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW---------KQEGDKWIEETKLENHSDWVRDVAWAPSW-  232 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw---------d~~~~~~~~~~~~~~h~~~V~~v~~sp~~-  232 (318)
                      ..-.+-|...               +.++--.-.++.+.++         +..++. .+.+.|.||.+.|...-|---. 
T Consensus       249 w~~r~~Pfg~---------------g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~-~pVh~F~GH~D~V~eFlWR~r~e  312 (1081)
T KOG0309|consen  249 WRGRYLPFGE---------------GYCIMPMVGGNMVPQLRCENSDLEWNVFDLN-TPVHTFVGHDDVVLEFLWRKRKE  312 (1081)
T ss_pred             eeccccccCc---------------eeEeccccCCeeeeeccccchhhhhccccCC-cceeeecCcchHHHHHhhhhccc
Confidence            3334444321               2222212222244444         322222 3567889999988877664321 


Q ss_pred             -----CCCccEEEEEeCCCeEEEEEcCC
Q psy2762         233 -----GLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       233 -----~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                           .....+|+|=|.|.++|+|-+..
T Consensus       313 ~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  313 CDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             ccCCCCccceeEEEeecCCceEeeeccH
Confidence                 11245899999999999997654

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.95  E-value=1.2e-06  Score=87.95  Aligned_cols=260  Identities=17%  Similarity=0.283  Sum_probs=157.4

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcC------CCcCCCCC-------------CCC----cceE-----------
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLD------RNLKKDDS-------------HSQ----KGTL-----------   58 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~------~~~~~~~~-------------~~~----~~~~-----------   58 (318)
                      ...|.+++||||+.+|+....+++|.+.+.+      .+....+.             +++    .++.           
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence            4589999999999999999889999887532      00000000             011    1111           


Q ss_pred             ---EEEecccccCeEEEEecCCCCCcEEEEEEC---C---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEE
Q psy2762          59 ---IAELKGHSGPVWQVAWAHPQFGTLLASCSY---D---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL  129 (318)
Q Consensus        59 ---~~~~~~h~~~V~~v~~~~~~~~~~las~s~---D---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~l  129 (318)
                         ...+. +.+.-..++|.  .||.+||..+.   .   +.+|||+-+ +....  ..+.-.+--.+++|.|.  +.++
T Consensus       200 ~~d~~~~s-~dd~~~~ISWR--GDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~s--tSE~v~gLe~~l~WrPs--G~lI  271 (928)
T PF04762_consen  200 KVDEGKLS-WDDGRVRISWR--GDGEYFAVSSVEPETGSRRVIRVYSRE-GELQS--TSEPVDGLEGALSWRPS--GNLI  271 (928)
T ss_pred             ccccCccc-cCCCceEEEEC--CCCcEEEEEEEEcCCCceeEEEEECCC-ceEEe--ccccCCCccCCccCCCC--CCEE
Confidence               01122 34445678995  47999999886   2   589999865 43222  11222333457899998  6777


Q ss_pred             EEeec---CCeEEEEEeecCCCCcceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEE
Q psy2762         130 ACGSS---DGTISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK  204 (318)
Q Consensus       130 asgs~---d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd  204 (318)
                      |+...   ...|.+|. +++-+-.+ ..+.  .....+..+.|+++                 +..||.--.|. |.+|.
T Consensus       272 A~~q~~~~~~~VvFfE-rNGLrhge-F~l~~~~~~~~v~~l~Wn~d-----------------s~iLAv~~~~~-vqLWt  331 (928)
T PF04762_consen  272 ASSQRLPDRHDVVFFE-RNGLRHGE-FTLRFDPEEEKVIELAWNSD-----------------SEILAVWLEDR-VQLWT  331 (928)
T ss_pred             EEEEEcCCCcEEEEEe-cCCcEeee-EecCCCCCCceeeEEEECCC-----------------CCEEEEEecCC-ceEEE
Confidence            77654   23444443 12211000 1111  23456889999987                 45677766655 99999


Q ss_pred             ccCCeEEEEEEcccC-CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc----CCCc------------------cee-
Q psy2762         205 QEGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS----NDYV------------------TWT-  260 (318)
Q Consensus       205 ~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~----~~~~------------------~~~-  260 (318)
                      ..+-.|...+++.-. ...+..+.|+|.   ....|.....++.+..++.    ....                  ..+ 
T Consensus       332 ~~NYHWYLKqei~~~~~~~~~~~~Wdpe---~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTp  408 (928)
T PF04762_consen  332 RSNYHWYLKQEIRFSSSESVNFVKWDPE---KPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTP  408 (928)
T ss_pred             eeCCEEEEEEEEEccCCCCCCceEECCC---CCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEec
Confidence            887777666655422 233556999997   4556666666566655431    1110                  000 


Q ss_pred             -------eEE---eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         261 -------PFI---MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       261 -------~~~---~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                             |.+   .-.+...|.+|+|++++..+|.-..||++.+|.......|
T Consensus       409 f~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~  461 (928)
T PF04762_consen  409 FRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMW  461 (928)
T ss_pred             ccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcc
Confidence                   000   0123478999999999988999999999999996665444

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.94  E-value=1.8e-05  Score=71.39  Aligned_cols=249  Identities=19%  Similarity=0.209  Sum_probs=143.0

Q ss_pred             EEEeeCC----CcEEEEEcCCCcCCCCCCCCcceE--EEEecccccCeEEEEecCCCCCcEEEEEEC----CCeEEEEeC
Q psy2762          28 LATCSSD----HTVKVFNLDRNLKKDDSHSQKGTL--IAELKGHSGPVWQVAWAHPQFGTLLASCSY----DRKVIIWRG   97 (318)
Q Consensus        28 l~s~s~D----~~v~vwd~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~v~~~~~~~~~~las~s~----Dg~v~vWd~   97 (318)
                      ++.|+..    +.|.+|+++..         .+++  +..+. -...-..+++++  ++++|.+...    ++.|..|++
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~---------~g~l~~~~~~~-~~~~Ps~l~~~~--~~~~LY~~~e~~~~~g~v~~~~i   69 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEE---------TGTLTLVQTVA-EGENPSWLAVSP--DGRRLYVVNEGSGDSGGVSSYRI   69 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETT---------TTEEEEEEEEE-ESSSECCEEE-T--TSSEEEEEETTSSTTTEEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCC---------CCCceEeeeec-CCCCCceEEEEe--CCCEEEEEEccccCCCCEEEEEE
Confidence            3445555    78999988422         2332  23222 223334466653  4788888877    579999987


Q ss_pred             CC--CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecccc-----------cccc
Q psy2762          98 DN--GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHT-----------IGCN  163 (318)
Q Consensus        98 ~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~-----------~~v~  163 (318)
                      ..  +....+............++++|+  +.++.++. .++.|.++++..+-.......+..|.           ....
T Consensus        70 ~~~~g~L~~~~~~~~~g~~p~~i~~~~~--g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H  147 (345)
T PF10282_consen   70 DPDTGTLTLLNSVPSGGSSPCHIAVDPD--GRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPH  147 (345)
T ss_dssp             ETTTTEEEEEEEEEESSSCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEE
T ss_pred             CCCcceeEEeeeeccCCCCcEEEEEecC--CCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccce
Confidence            65  344444444323455678999998  44555554 58899999885432111111111111           1234


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCe--EEEEEEcc-cCCCCeeEEEEccCCCCCccEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDK--WIEETKLE-NHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~--~~~~~~~~-~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      .+.++|+.                 ++ +++--....|++|+++...  +.....+. .....-+.+.|+|+    +.++
T Consensus       148 ~v~~~pdg-----------------~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pd----g~~~  206 (345)
T PF10282_consen  148 QVVFSPDG-----------------RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPD----GKYA  206 (345)
T ss_dssp             EEEE-TTS-----------------SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TT----SSEE
T ss_pred             eEEECCCC-----------------CEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCC----cCEE
Confidence            67777762                 33 3434444579999987653  33322222 22344689999997    5555


Q ss_pred             -EEEeCCCeEEEEEcCCCc-cee-eEEeee----c--CCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC-CCCceEEEee
Q psy2762         240 -ASCSQDRKVIIWTSNDYV-TWT-PFIMNT----F--DDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN-TDGAWQCITE  308 (318)
Q Consensus       240 -~s~s~D~~i~vw~~~~~~-~~~-~~~~~~----~--~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~-~~~~~~~~~~  308 (318)
                       +..-.+.+|.+++..... ... ......    .  ......+.++|||++|..+. ..++|.+++++ .+|....+..
T Consensus       207 Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~  286 (345)
T PF10282_consen  207 YVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQT  286 (345)
T ss_dssp             EEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEE
T ss_pred             EEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEE
Confidence             555568889999887221 111 111111    1  12578999999999988776 46799999994 4677777766


Q ss_pred             ecc
Q psy2762         309 MGK  311 (318)
Q Consensus       309 ~~~  311 (318)
                      +..
T Consensus       287 ~~~  289 (345)
T PF10282_consen  287 VPT  289 (345)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            544

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4190|consensus

Probab=98.93  E-value=1.2e-08  Score=92.45  Aligned_cols=175  Identities=15%  Similarity=0.197  Sum_probs=110.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .++||+..|+.+.--.+.+-++|+|.|++|++|.+...    -+.-.+..+--+++.|+.+|..+.|-.  +.++++|+ 
T Consensus       730 nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~E----gD~~~tsaCQfTY~aHkk~i~~igfL~--~lr~i~Sc-  802 (1034)
T KOG4190|consen  730 NFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPE----GDEIGTSACQFTYQAHKKPIHDIGFLA--DLRSIASC-  802 (1034)
T ss_pred             cccCcHHHhHHHHhcccccceeeccCCceEEEEEeccc----cCccccceeeeEhhhccCcccceeeee--ccceeeec-
Confidence            46899999999886667777899999999999998521    111122345678999999999999963  35666654 


Q ss_pred             CCCeEEEEeCCCCcEEEE-EEe--cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--ccccccc
Q psy2762          88 YDRKVIIWRGDNGNWFKY-YEY--NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGC  162 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~-~~~--~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v  162 (318)
                       |+-|.+||.--++.... ..-  .+..+.|.|+.=-  ++..++|-++...+|+++|.+......+.+.-  .+...-+
T Consensus       803 -D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv--~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~  879 (1034)
T KOG4190|consen  803 -DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENV--DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALT  879 (1034)
T ss_pred             -cCcceeecccccchhHhhhcCcccCCCceeEecccC--cchheeeeccchhhheeeecccccceeeEEeccCCCCchhe
Confidence             89999999754442211 111  1223445555311  22345555588999999987554321111111  1122223


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK  209 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~  209 (318)
                      .+++.-|.                 |+.+|.+-.+|+|-+.|.+++.
T Consensus       880 R~iaVa~~-----------------GN~lAa~LSnGci~~LDaR~G~  909 (1034)
T KOG4190|consen  880 RAIAVADK-----------------GNKLAAALSNGCIAILDARNGK  909 (1034)
T ss_pred             eEEEeccC-----------------cchhhHHhcCCcEEEEecCCCc
Confidence            44444443                 4678888888888888877764

>KOG0309|consensus

Probab=98.93  E-value=1.3e-08  Score=94.82  Aligned_cols=250  Identities=17%  Similarity=0.259  Sum_probs=154.4

Q ss_pred             eeeeeeecCCC---CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          15 MIHDAEMDYLG---LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        15 ~v~~~~~~~~g---~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      .|-...++|..   ..+++-+ ...-.||++..+        ....+...+.+|+..|+.+-|. +.....||+++.|-.
T Consensus        69 ~vad~qws~h~a~~~wiVsts-~qkaiiwnlA~s--------s~~aIef~lhghsraitd~n~~-~q~pdVlatcsvdt~  138 (1081)
T KOG0309|consen   69 QVADVQWSPHPAKPYWIVSTS-NQKAIIWNLAKS--------SSNAIEFVLHGHSRAITDINFN-PQHPDVLATCSVDTY  138 (1081)
T ss_pred             hhcceecccCCCCceeEEecC-cchhhhhhhhcC--------CccceEEEEecCccceeccccC-CCCCcceeecccccc
Confidence            35556677643   2466555 455679998743        1233456788999999999995 567899999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |..||..+... +.+.+..-......|+|+.... . +.+.+..+.|.+||.+.+.  .....+++|...++.+.|....
T Consensus       139 vh~wd~rSp~~-p~ys~~~w~s~asqVkwnyk~p-~-vlasshg~~i~vwd~r~gs--~pl~s~K~~vs~vn~~~fnr~~  213 (1081)
T KOG0309|consen  139 VHAWDMRSPHR-PFYSTSSWRSAASQVKWNYKDP-N-VLASSHGNDIFVWDLRKGS--TPLCSLKGHVSSVNSIDFNRFK  213 (1081)
T ss_pred             ceeeeccCCCc-ceeeeecccccCceeeecccCc-c-hhhhccCCceEEEeccCCC--cceEEecccceeeehHHHhhhh
Confidence            99999887542 3444333334567789998743 3 3445667789999986654  2455677888888877776532


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE-
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII-  250 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v-  250 (318)
                                      -..+.+++.|++|++||.+......... ...+.+|..-+|-|=+  +|.++.--=-+..+-+ 
T Consensus       214 ----------------~s~~~s~~~d~tvkfw~y~kSt~e~~~~-vtt~~piw~~r~~Pfg--~g~~~mp~~G~n~v~~~  274 (1081)
T KOG0309|consen  214 ----------------YSEIMSSSNDGTVKFWDYSKSTTESKRT-VTTNFPIWRGRYLPFG--EGYCIMPMVGGNMVPQL  274 (1081)
T ss_pred             ----------------hhhhcccCCCCceeeeccccccccccee-ccccCcceeccccccC--ceeEeccccCCeeeeec
Confidence                            1247899999999999976542111111 1233445555555521  1222211111112333 


Q ss_pred             --------EEcCCCcceeeEEeeecCCcEEEEEEcCCC----------CEEEEEeCCCeEEEEEECC
Q psy2762         251 --------WTSNDYVTWTPFIMNTFDDVVWNVSWSLTG----------DILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       251 --------w~~~~~~~~~~~~~~~~~~~v~~v~~spdg----------~~l~s~~~D~~v~iW~~~~  299 (318)
                              |+..+.. .......+|++.|...-|=-.+          -+|++=+.|.+||+|-++.
T Consensus       275 ~c~n~d~e~n~~~~~-~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  275 RCENSDLEWNVFDLN-TPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             cccchhhhhccccCC-cceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence                    3322221 1223455777776655553222          3688999999999998654

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.92  E-value=1.6e-05  Score=69.09  Aligned_cols=232  Identities=18%  Similarity=0.201  Sum_probs=140.6

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceE-EEEecccccCeEEEEecCCCCCcEEEEEECC---CeEEEEeCCC--CcEEEEEE
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTL-IAELKGHSGPVWQVAWAHPQFGTLLASCSYD---RKVIIWRGDN--GNWFKYYE  107 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~~~~~~~~~las~s~D---g~v~vWd~~~--~~~~~~~~  107 (318)
                      ++-|.+|+++..         .+++ ...+-.+.+..+-+.|++  +.++|.++-.+   |.|..+.++.  +.......
T Consensus        15 s~gI~v~~ld~~---------~g~l~~~~~v~~~~nptyl~~~~--~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~   83 (346)
T COG2706          15 SQGIYVFNLDTK---------TGELSLLQLVAELGNPTYLAVNP--DQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNR   83 (346)
T ss_pred             CCceEEEEEeCc---------ccccchhhhccccCCCceEEECC--CCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeec
Confidence            567999999732         2222 222345677888899963  47788887654   7788877664  44433322


Q ss_pred             ecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeecccccc----------cceeeeCCCCCCCcc
Q psy2762         108 YNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIAAHTIG----------CNAVSWGPGIGSLSE  176 (318)
Q Consensus       108 ~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~p~~~~~~~  176 (318)
                      ......+.+.|++.++  +.++.++.. .|.|.++.+..+-.......+..|..+          +-...+.|+      
T Consensus        84 ~~~~g~~p~yvsvd~~--g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~------  155 (346)
T COG2706          84 QTLPGSPPCYVSVDED--GRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPD------  155 (346)
T ss_pred             cccCCCCCeEEEECCC--CCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCC------
Confidence            2223344478999988  555555554 468888766433211122222234433          444555554      


Q ss_pred             ccccCCCCCCccceEEEe--cCCCeEEEEEccCCeEEEE--EEcccCCCCeeEEEEccCCCCCccEEEEEeC-CCeEEEE
Q psy2762         177 LDLKGSKLGGVAKRLVSG--GCDNLIKIWKQEGDKWIEE--TKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DRKVIIW  251 (318)
Q Consensus       177 ~~~~~~~~~~~~~~lasg--s~d~~i~iwd~~~~~~~~~--~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~~i~vw  251 (318)
                                 +++|++.  +.| .|.+|++..+.+...  ..+ .....-+-|.|+|+    +++.....+ +.+|-+|
T Consensus       156 -----------~~~l~v~DLG~D-ri~~y~~~dg~L~~~~~~~v-~~G~GPRHi~FHpn----~k~aY~v~EL~stV~v~  218 (346)
T COG2706         156 -----------GRYLVVPDLGTD-RIFLYDLDDGKLTPADPAEV-KPGAGPRHIVFHPN----GKYAYLVNELNSTVDVL  218 (346)
T ss_pred             -----------CCEEEEeecCCc-eEEEEEcccCcccccccccc-CCCCCcceEEEcCC----CcEEEEEeccCCEEEEE
Confidence                       3555554  344 588999887654322  222 22334588999996    677666665 9999999


Q ss_pred             EcCCCcceeeEEee-------ecC--CcEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCc
Q psy2762         252 TSNDYVTWTPFIMN-------TFD--DVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGA  302 (318)
Q Consensus       252 ~~~~~~~~~~~~~~-------~~~--~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~  302 (318)
                      ...+.. .....++       .++  .+...+..+|||++|..+-+ ...|-++.++..+.
T Consensus       219 ~y~~~~-g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g  278 (346)
T COG2706         219 EYNPAV-GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGG  278 (346)
T ss_pred             EEcCCC-ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCC
Confidence            887742 1111111       222  46778899999999987754 44888999888544

>KOG3914|consensus

Probab=98.91  E-value=3.5e-08  Score=86.10  Aligned_cols=163  Identities=15%  Similarity=0.163  Sum_probs=100.8

Q ss_pred             EEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC
Q psy2762         118 IAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD  197 (318)
Q Consensus       118 v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d  197 (318)
                      +..+|.  +.++|++..++.+.+++++...+..+......-....+.+.+..+...              ....-..+..
T Consensus        68 ~~~s~~--~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~s--------------v~v~dkagD~  131 (390)
T KOG3914|consen   68 VLTSDS--GRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTS--------------VLVADKAGDV  131 (390)
T ss_pred             cccCCC--ceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccce--------------EEEEeecCCc
Confidence            344454  678888888887777776544321221111111112222222221100              1122334455


Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS  277 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s  277 (318)
                      ..+.+|....+.+   ..+-||-.-+++|.|+|+    +++|+++..|..|||-.......- ....-+|+..|..++.-
T Consensus       132 ~~~di~s~~~~~~---~~~lGhvSml~dVavS~D----~~~IitaDRDEkIRvs~ypa~f~I-esfclGH~eFVS~isl~  203 (390)
T KOG3914|consen  132 YSFDILSADSGRC---EPILGHVSMLLDVAVSPD----DQFIITADRDEKIRVSRYPATFVI-ESFCLGHKEFVSTISLT  203 (390)
T ss_pred             eeeeeecccccCc---chhhhhhhhhheeeecCC----CCEEEEecCCceEEEEecCcccch-hhhccccHhheeeeeec
Confidence            5566666543322   234589999999999996    789999999999999765432210 01234788999999998


Q ss_pred             CCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         278 LTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       278 pdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      + ++.|+|+|+|++||+||...+....|
T Consensus       204 ~-~~~LlS~sGD~tlr~Wd~~sgk~L~t  230 (390)
T KOG3914|consen  204 D-NYLLLSGSGDKTLRLWDITSGKLLDT  230 (390)
T ss_pred             c-CceeeecCCCCcEEEEecccCCcccc
Confidence            5 45689999999999999998877654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.91  E-value=2.1e-05  Score=70.24  Aligned_cols=246  Identities=12%  Similarity=0.120  Sum_probs=131.0

Q ss_pred             ecCCCCEEEEeeC----------CCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc-------CeEEEEecCCCCCcEE
Q psy2762          21 MDYLGLYLATCSS----------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG-------PVWQVAWAHPQFGTLL   83 (318)
Q Consensus        21 ~~~~g~~l~s~s~----------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~-------~V~~v~~~~~~~~~~l   83 (318)
                      ++|||+.|+.|..          +..|.|||..+           .+.+..+..-..       .-..+++++  +|++|
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t-----------~~~~~~i~~p~~p~~~~~~~~~~~~ls~--dgk~l  119 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT-----------HLPIADIELPEGPRFLVGTYPWMTSLTP--DNKTL  119 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECcc-----------CcEEeEEccCCCchhhccCccceEEECC--CCCEE
Confidence            8999998887665          78999999873           455555543111       122456653  58888


Q ss_pred             EEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccc-
Q psy2762          84 ASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHT-  159 (318)
Q Consensus        84 as~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~-  159 (318)
                      +....  +..|-+.|+.+++.+......   +...-...++.  ...+  -+.||......+....+ ....... -+. 
T Consensus       120 ~V~n~~p~~~V~VvD~~~~kvv~ei~vp---~~~~vy~t~e~--~~~~--~~~Dg~~~~v~~d~~g~-~~~~~~~vf~~~  191 (352)
T TIGR02658       120 LFYQFSPSPAVGVVDLEGKAFVRMMDVP---DCYHIFPTAND--TFFM--HCRDGSLAKVGYGTKGN-PKIKPTEVFHPE  191 (352)
T ss_pred             EEecCCCCCEEEEEECCCCcEEEEEeCC---CCcEEEEecCC--ccEE--EeecCceEEEEecCCCc-eEEeeeeeecCC
Confidence            87663  689999999988754433321   21111222222  2222  22344433322211111 0000000 000 


Q ss_pred             -ccccee-eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-----EEEEEEccc-----CCCCeeEEE
Q psy2762         160 -IGCNAV-SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-----WIEETKLEN-----HSDWVRDVA  227 (318)
Q Consensus       160 -~~v~~~-~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-----~~~~~~~~~-----h~~~V~~v~  227 (318)
                       .++..- .|.+.                .+.++....+ |+|.+.|+....     ......+..     ......-++
T Consensus       192 ~~~v~~rP~~~~~----------------dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia  254 (352)
T TIGR02658       192 DEYLINHPAYSNK----------------SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVA  254 (352)
T ss_pred             ccccccCCceEcC----------------CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEE
Confidence             000000 11220                1345555555 999999964432     111111110     122233489


Q ss_pred             EccCCCCCccEEEEEe---------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEEEEE
Q psy2762         228 WAPSWGLSKCMIASCS---------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVSLWK  296 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s---------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~iW~  296 (318)
                      ++|+   .++.++..-         ..+.|.++|..+...  ...+ .....+++++++|||+ .|.++. .++.|.+.|
T Consensus       255 ~~~d---g~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv--i~~i-~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD  328 (352)
T TIGR02658       255 YHRA---RDRIYLLADQRAKWTHKTASRFLFVVDAKTGKR--LRKI-ELGHEIDSINVSQDAKPLLYALSTGDKTLYIFD  328 (352)
T ss_pred             EcCC---CCEEEEEecCCccccccCCCCEEEEEECCCCeE--EEEE-eCCCceeeEEECCCCCeEEEEeCCCCCcEEEEE
Confidence            9987   233333231         125788888876431  2222 2346899999999999 888776 578999999


Q ss_pred             ECCCCceEEEeeec
Q psy2762         297 ENTDGAWQCITEMG  310 (318)
Q Consensus       297 ~~~~~~~~~~~~~~  310 (318)
                      ..+....+.+..++
T Consensus       329 ~~t~k~i~~i~~vg  342 (352)
T TIGR02658       329 AETGKELSSVNQLG  342 (352)
T ss_pred             CcCCeEEeeeccCC
Confidence            88876666665544

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4532|consensus

Probab=98.88  E-value=7.5e-07  Score=74.20  Aligned_cols=247  Identities=10%  Similarity=0.003  Sum_probs=144.5

Q ss_pred             eeeecCC-----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          18 DAEMDYL-----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        18 ~~~~~~~-----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .+.|.|-     ..+||.||+-|...+|.....          ...+.....|...|+-+.-..+ ..-.+.-++-|.++
T Consensus        72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn----------~~h~~~cd~snn~v~~~~r~cd-~~~~~~i~sndht~  140 (344)
T KOG4532|consen   72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTN----------DGHLYQCDVSNNDVTLVKRYCD-LKFPLNIASNDHTG  140 (344)
T ss_pred             cccccchHhhccccEEEeccccceeeeecccCc----------ccceeeecccccchhhhhhhcc-cccceeeccCCcce
Confidence            3555553     368999999999999998632          1223333444443332211111 12235567889999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      ++.+++.+....  .+....-.+++++.+|+  +.++++.+....|-+|.+...........++.-+..-.+.+|+..  
T Consensus       141 k~~~~~~~s~~~--~~h~~~~~~ns~~~snd--~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~--  214 (344)
T KOG4532|consen  141 KTMVVSGDSNKF--AVHNQNLTQNSLHYSND--PSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEN--  214 (344)
T ss_pred             eEEEEecCcccc--eeeccccceeeeEEcCC--CceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccC--
Confidence            999876543211  11111233889999998  778999888888888876433221111122223333455666643  


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EEE--EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIE--ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~~--~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                                     ...+|++++||++-|||++... +..  ..+-+.|++.++.+.|+|.+.. .-++.| -.=+.+.
T Consensus       215 ---------------~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~l-DLLf~s-Ehfs~~h  277 (344)
T KOG4532|consen  215 ---------------DLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLL-DLLFIS-EHFSRVH  277 (344)
T ss_pred             ---------------cceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcc-eEEEEe-cCcceEE
Confidence                           3579999999999999987532 111  1223569999999999995322 223333 3346688


Q ss_pred             EEEcCCCcceeeEEee-----ecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         250 IWTSNDYVTWTPFIMN-----TFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~-----~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      |-|.++....+...+.     .|. +-|....|+.++..+.+..++ .+.=|+++.
T Consensus       278 v~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  278 VVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILS  332 (344)
T ss_pred             EEEcccCceeeEEecCccccccccccccccccccCCCcccccccch-hhheeeccc
Confidence            8888876533222211     122 337777788777776666554 233344433

>KOG2315|consensus

Probab=98.86  E-value=1.1e-06  Score=79.93  Aligned_cols=131  Identities=15%  Similarity=0.149  Sum_probs=77.0

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE-----ECC
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC-----SYD   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~-----s~D   89 (318)
                      ..+..+++++|++++- +.+..++|++...           ...+.+...-  .++++.|++  .+.+|.+-     -.|
T Consensus        36 ~~~v~~~S~~G~lfA~-~~~~~v~i~~~~~-----------~~~~lt~~~~--~~~~L~fSP--~g~yL~T~e~~~i~~~   99 (566)
T KOG2315|consen   36 PCNVFAYSNNGRLFAY-SDNQVVKVFEIAT-----------LKVVLCVELK--KTYDLLFSP--KGNYLLTWEPWAIYGP   99 (566)
T ss_pred             cceeEEEcCCCcEEEE-EcCCeEEEEEccC-----------CcEEEEeccc--eeeeeeecc--cccccccccccccccC
Confidence            3667888999998875 5578999998862           2223232222  688999974  36777652     223


Q ss_pred             C-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          90 R-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        90 g-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +     -+++|+.+++.....+....  ..-.+..|++|+.   +++=-..+.+.+++....+    ...-+-|..++..
T Consensus       100 ~~~~~pn~~v~~vet~~~~s~~q~k~--Q~~W~~qfs~dEs---l~arlv~nev~f~~~~~f~----~~~~kl~~~~i~~  170 (566)
T KOG2315|consen  100 KNASNPNVLVYNVETGVQRSQIQKKM--QNGWVPQFSIDES---LAARLVSNEVQFYDLGSFK----TIQHKLSVSGITM  170 (566)
T ss_pred             CCCCCCceeeeeeccceehhheehhh--hcCcccccccchh---hhhhhhcceEEEEecCCcc----ceeeeeeccceee
Confidence            3     46699887743222222222  2226889998852   3444445678888764422    1122235566777


Q ss_pred             eeeCCC
Q psy2762         165 VSWGPG  170 (318)
Q Consensus       165 ~~~~p~  170 (318)
                      +++||.
T Consensus       171 f~lSpg  176 (566)
T KOG2315|consen  171 LSLSPG  176 (566)
T ss_pred             EEecCC
Confidence            777775

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.78  E-value=2.3e-05  Score=78.87  Aligned_cols=227  Identities=18%  Similarity=0.298  Sum_probs=132.5

Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEE----eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIW----RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW----d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      ..+.|.++.|-.  +...++.+..+|.|.+.    +........+..+   ...|.+.+||||  +.+++..+.++++.+
T Consensus        74 ~~~~ivs~~yl~--d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~v---d~GI~a~~WSPD--~Ella~vT~~~~l~~  146 (928)
T PF04762_consen   74 PNDKIVSFQYLA--DSESLCIALASGDIILVREDPDPDEDEIEIVGSV---DSGILAASWSPD--EELLALVTGEGNLLL  146 (928)
T ss_pred             CCCcEEEEEecc--CCCcEEEEECCceEEEEEccCCCCCceeEEEEEE---cCcEEEEEECCC--cCEEEEEeCCCEEEE
Confidence            356788888864  46678888889999999    6555443333333   467999999999  567777788888877


Q ss_pred             EEeecCCCCcceeeecccc---cccceeeeCCCCCCC----cc--------------------ccccC--CCCCCccceE
Q psy2762         141 LTYMSDTNSWESRKIAAHT---IGCNAVSWGPGIGSL----SE--------------------LDLKG--SKLGGVAKRL  191 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~----~~--------------------~~~~~--~~~~~~~~~l  191 (318)
                      ..-..+.  .....+....   ..-..|-|+...-+.    ..                    .+...  -.+...|.||
T Consensus       147 mt~~fd~--i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yF  224 (928)
T PF04762_consen  147 MTRDFDP--ISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYF  224 (928)
T ss_pred             EeccceE--EEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEE
Confidence            4311000  0000000000   001123333321000    00                    00000  0123347788


Q ss_pred             EEecC---C---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC---CCeEEEEEcCCCcceeeE
Q psy2762         192 VSGGC---D---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ---DRKVIIWTSNDYVTWTPF  262 (318)
Q Consensus       192 asgs~---d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~---D~~i~vw~~~~~~~~~~~  262 (318)
                      |+.+-   .   +.||||+.+ +.+  ..+.+.-.+--.+++|-|.    |.+||+.-.   ...|.+|.-.+.+... .
T Consensus       225 AVss~~~~~~~~R~iRVy~Re-G~L--~stSE~v~gLe~~l~WrPs----G~lIA~~q~~~~~~~VvFfErNGLrhge-F  296 (928)
T PF04762_consen  225 AVSSVEPETGSRRVIRVYSRE-GEL--QSTSEPVDGLEGALSWRPS----GNLIASSQRLPDRHDVVFFERNGLRHGE-F  296 (928)
T ss_pred             EEEEEEcCCCceeEEEEECCC-ceE--EeccccCCCccCCccCCCC----CCEEEEEEEcCCCcEEEEEecCCcEeee-E
Confidence            88764   2   579999876 332  2222322333457899996    788888875   4557778765543221 1


Q ss_pred             Eee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762         263 IMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       263 ~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      .+.  ..+..|..+.|++|+..||..-.|. |++|-..- ++|=.=.|+.
T Consensus       297 ~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N-YHWYLKqei~  344 (928)
T PF04762_consen  297 TLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN-YHWYLKQEIR  344 (928)
T ss_pred             ecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC-CEEEEEEEEE
Confidence            221  3346799999999999999988765 99997543 6776555554

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=98.78  E-value=6.5e-06  Score=74.71  Aligned_cols=196  Identities=12%  Similarity=0.134  Sum_probs=113.9

Q ss_pred             CcEE-EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          80 GTLL-ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        80 ~~~l-as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      ++++ ++-..++.|.|.|..+.+.+.  +++.....-..+.|+||  +.++...+.|+.|.++|+...+   .+..+..-
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~~--~i~~~~~~h~~~~~s~D--gr~~yv~~rdg~vsviD~~~~~---~v~~i~~G   77 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVVA--RIPTGGAPHAGLKFSPD--GRYLYVANRDGTVSVIDLATGK---VVATIKVG   77 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEEE--EEE-STTEEEEEE-TT---SSEEEEEETTSEEEEEETTSSS---EEEEEE-S
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEEE--EEcCCCCceeEEEecCC--CCEEEEEcCCCeEEEEECCccc---EEEEEecC
Confidence            3445 345568999999988776444  34432333345788998  5667777899999999985443   23334321


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEccc-----CCCCeeEEEEccCC
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLEN-----HSDWVRDVAWAPSW  232 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~-----h~~~V~~v~~sp~~  232 (318)
                       .....++++|+                 +++++++ -.++.+.|+|.++.+.+......+     ....+..|-.+|. 
T Consensus        78 -~~~~~i~~s~D-----------------G~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~-  138 (369)
T PF02239_consen   78 -GNPRGIAVSPD-----------------GKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPG-  138 (369)
T ss_dssp             -SEEEEEEE--T-----------------TTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SS-
T ss_pred             -CCcceEEEcCC-----------------CCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCC-
Confidence             23456888887                 4666655 578899999988876544332222     2345778888885 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE-eCCCeEEEEEECCCCceE
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~-~~D~~v~iW~~~~~~~~~  304 (318)
                        ...++++.-+-+.|.+-|..+....... ............|+|+|+++..+ -.++.+-++|..+.+...
T Consensus       139 --~~~fVv~lkd~~~I~vVdy~d~~~~~~~-~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~  208 (369)
T PF02239_consen  139 --RPEFVVNLKDTGEIWVVDYSDPKNLKVT-TIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVA  208 (369)
T ss_dssp             --SSEEEEEETTTTEEEEEETTTSSCEEEE-EEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             --CCEEEEEEccCCeEEEEEecccccccee-eecccccccccccCcccceeeecccccceeEEEeeccceEEE
Confidence              2334554444577777776654322111 22234567889999999987665 457789999976654433

...

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.76  E-value=3.9e-08  Score=58.50  Aligned_cols=39  Identities=33%  Similarity=0.687  Sum_probs=35.3

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      ++++.++++|.+.|++++|++  ++.+|+|++.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~--~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSP--DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEET--TSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEec--ccccceeeCCCCEEEEEC
Confidence            357889999999999999974  489999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.75  E-value=0.00011  Score=64.01  Aligned_cols=258  Identities=12%  Similarity=0.188  Sum_probs=155.0

Q ss_pred             CCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceE--EEEecccccCeEEEEecCCCCCcEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTL--IAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.+.++-++|+|++++|.++-.   +|.|..|.++..         .|.+  +.....-..+-+.++.+  .++++|++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~---------~G~Lt~ln~~~~~g~~p~yvsvd--~~g~~vf~  105 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPD---------DGRLTFLNRQTLPGSPPCYVSVD--EDGRFVFV  105 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCC---------CCeEEEeeccccCCCCCeEEEEC--CCCCEEEE
Confidence            45778888999999999998754   478888888621         2332  21111111222667775  46899999


Q ss_pred             EECC-CeEEEEeCCC-CcEEEEEEecCCCcC----------eEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCc-c
Q psy2762          86 CSYD-RKVIIWRGDN-GNWFKYYEYNNHDSS----------VNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSW-E  151 (318)
Q Consensus        86 ~s~D-g~v~vWd~~~-~~~~~~~~~~~h~~~----------v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~-~  151 (318)
                      +.+- |.|.++.++. +.......+..|.+.          +-+..+.|+  ++++++..- --.|.+|++..+.-.. .
T Consensus       106 AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~--~~~l~v~DLG~Dri~~y~~~dg~L~~~~  183 (346)
T COG2706         106 ANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPD--GRYLVVPDLGTDRIFLYDLDDGKLTPAD  183 (346)
T ss_pred             EEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCC--CCEEEEeecCCceEEEEEcccCcccccc
Confidence            9885 7899998754 333233223335544          778889998  555555432 2357788876332110 0


Q ss_pred             eeeecccccccceeeeCCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEccC--CeEEEEEEcc------cCCCC
Q psy2762         152 SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEG--DKWIEETKLE------NHSDW  222 (318)
Q Consensus       152 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~--~~~~~~~~~~------~h~~~  222 (318)
                      ...+ ....+-.=+.|+|+.                 ++. +..--+++|-+|....  +++.+.+.+.      .-..+
T Consensus       184 ~~~v-~~G~GPRHi~FHpn~-----------------k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~  245 (346)
T COG2706         184 PAEV-KPGAGPRHIVFHPNG-----------------KYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNW  245 (346)
T ss_pred             cccc-CCCCCcceEEEcCCC-----------------cEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCc
Confidence            1111 222344567888873                 332 2334467888887665  4443333321      12234


Q ss_pred             eeEEEEccCCCCCccEEEEEeC-CCeEEEEEcCCCcceeeE---EeeecCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEE
Q psy2762         223 VRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPF---IMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKE  297 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s~-D~~i~vw~~~~~~~~~~~---~~~~~~~~v~~v~~spdg~~l~s~~~D~-~v~iW~~  297 (318)
                      .-.|..+|+    |++|..+-. ...|-++.+..... ...   ..+.+........|+|+|++|+.+.+|. .+.++.+
T Consensus       246 ~aaIhis~d----GrFLYasNRg~dsI~~f~V~~~~g-~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~  320 (346)
T COG2706         246 AAAIHISPD----GRFLYASNRGHDSIAVFSVDPDGG-KLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFER  320 (346)
T ss_pred             eeEEEECCC----CCEEEEecCCCCeEEEEEEcCCCC-EEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEE
Confidence            667888886    777776643 34677777665432 111   1123334577899999999999998744 7999987


Q ss_pred             CC-CCceE
Q psy2762         298 NT-DGAWQ  304 (318)
Q Consensus       298 ~~-~~~~~  304 (318)
                      +. .|...
T Consensus       321 d~~TG~L~  328 (346)
T COG2706         321 DKETGRLT  328 (346)
T ss_pred             cCCCceEE
Confidence            66 44443

>KOG0882|consensus

Probab=98.75  E-value=3.8e-07  Score=80.85  Aligned_cols=267  Identities=15%  Similarity=0.199  Sum_probs=171.3

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-C
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-D   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-D   89 (318)
                      -|.+.|+.+ |....+++.+++.||.++.|.-...        ..-+.+.-+..|.+.|.+++.+  .++.+++|.+. |
T Consensus         7 mhrd~i~hv-~~tka~fiiqASlDGh~KFWkKs~i--------sGvEfVKhFraHL~~I~sl~~S--~dg~L~~Sv~d~D   75 (558)
T KOG0882|consen    7 MHRDVITHV-FPTKAKFIIQASLDGHKKFWKKSRI--------SGVEFVKHFRAHLGVILSLAVS--YDGWLFRSVEDPD   75 (558)
T ss_pred             cccceeeeE-eeehhheEEeeecchhhhhcCCCCc--------cceeehhhhHHHHHHHHhhhcc--ccceeEeeccCcc
Confidence            488888877 4456689999999999999975421        0113456678899999988865  46899999888 9


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeee-cccccccceeee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSW  167 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~  167 (318)
                      ..+|++|+.+-....-.++.--++.+.++. +|...-.++|.+. .++.|.++|-..+..  +.... .-|..+|....+
T Consensus        76 hs~KvfDvEn~DminmiKL~~lPg~a~wv~-skGd~~s~IAVs~~~sg~i~VvD~~~d~~--q~~~fkklH~sPV~~i~y  152 (558)
T KOG0882|consen   76 HSVKVFDVENFDMINMIKLVDLPGFAEWVT-SKGDKISLIAVSLFKSGKIFVVDGFGDFC--QDGYFKKLHFSPVKKIRY  152 (558)
T ss_pred             cceeEEEeeccchhhhcccccCCCceEEec-CCCCeeeeEEeecccCCCcEEECCcCCcC--ccceecccccCceEEEEe
Confidence            999999987654332223332333343332 2221112344433 456778877543331  22222 358888888887


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC------Ce----E---EEEEEcccCCCCeeEEEEccCCCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG------DK----W---IEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~------~~----~---~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      .|.                 +..+++.-..|+|.-|....      .+    +   ..+..+........++.|+|+   
T Consensus       153 ~qa-----------------~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~---  212 (558)
T KOG0882|consen  153 NQA-----------------GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPD---  212 (558)
T ss_pred             ecc-----------------ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccc---
Confidence            774                 45678888889999997653      00    0   001112334455789999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCccee------------e---E---------------EeeecC-CcEEEEEEcCCCCEE
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWT------------P---F---------------IMNTFD-DVVWNVSWSLTGDIL  283 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~------------~---~---------------~~~~~~-~~v~~v~~spdg~~l  283 (318)
                       +..+.+-+.|+.||++.+.++...+            +   .               ++..+. ..-..+.|.-.|++|
T Consensus       213 -g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~fl  291 (558)
T KOG0882|consen  213 -GAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFL  291 (558)
T ss_pred             -cCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEE
Confidence             8889999999999999987753100            0   0               111111 123456788889998


Q ss_pred             EEEeCCCeEEEEEECCCCceEEEeeeccccccc
Q psy2762         284 TVSCGDNSVSLWKENTDGAWQCITEMGKTSEQR  316 (318)
Q Consensus       284 ~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~~~~  316 (318)
                      +-+.-= -+++.++.+.   .++.-+|+.+.-|
T Consensus       292 ly~t~~-gikvin~~tn---~v~ri~gk~e~ir  320 (558)
T KOG0882|consen  292 LYGTIL-GIKVINLDTN---TVVRILGKDEAIR  320 (558)
T ss_pred             Eeecce-eEEEEEeecC---eEEEEeccchhhh
Confidence            877654 4788888776   5677777776544

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.71  E-value=8.1e-08  Score=57.11  Aligned_cols=37  Identities=27%  Similarity=0.580  Sum_probs=33.9

Q ss_pred             EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      ...++.+|...|++|+|+|+    +.+|++++.|++|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~----~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPD----GNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETT----SSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecc----cccceeeCCCCEEEEEC
Confidence            45678899999999999996    88999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG3914|consensus

Probab=98.70  E-value=3.9e-07  Score=79.68  Aligned_cols=149  Identities=13%  Similarity=0.181  Sum_probs=94.5

Q ss_pred             CCcEEEEEECCCeEEEEeCCCCc----EEEEEEecCCCcCeEEEEeeCCCC-CcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGN----WFKYYEYNNHDSSVNSIAWAPKEF-GLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~----~~~~~~~~~h~~~v~~v~~~p~~~-~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                      .+.+||.+..++...+++.....    ....+.+..-.   +++.|..++. ..++--.+....+.+|..   .. +...
T Consensus        73 ~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~---~ai~~~~~~~sv~v~dkagD~~~~di~s~---~~-~~~~  145 (390)
T KOG3914|consen   73 SGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRP---TAISFIREDTSVLVADKAGDVYSFDILSA---DS-GRCE  145 (390)
T ss_pred             CceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCc---ceeeeeeccceEEEEeecCCceeeeeecc---cc-cCcc
Confidence            58899998888876666654332    12222222222   2333333221 112222222333444432   11 3455


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                      .+.+|-.-+..++|+|+                 +++|+++-.|..|||=....-. .-..-+-||++.|..++.-+   
T Consensus       146 ~~lGhvSml~dVavS~D-----------------~~~IitaDRDEkIRvs~ypa~f-~IesfclGH~eFVS~isl~~---  204 (390)
T KOG3914|consen  146 PILGHVSMLLDVAVSPD-----------------DQFIITADRDEKIRVSRYPATF-VIESFCLGHKEFVSTISLTD---  204 (390)
T ss_pred             hhhhhhhhhheeeecCC-----------------CCEEEEecCCceEEEEecCccc-chhhhccccHhheeeeeecc---
Confidence            67799999999999998                 4789999999999997654211 11111358999999999987   


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                        ++.|+|+|-|++|++||.....
T Consensus       205 --~~~LlS~sGD~tlr~Wd~~sgk  226 (390)
T KOG3914|consen  205 --NYLLLSGSGDKTLRLWDITSGK  226 (390)
T ss_pred             --CceeeecCCCCcEEEEecccCC
Confidence              4679999999999999988754

>KOG0882|consensus

Probab=98.70  E-value=1.6e-07  Score=83.14  Aligned_cols=219  Identities=14%  Similarity=0.050  Sum_probs=142.6

Q ss_pred             ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEE
Q psy2762          64 GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFL  141 (318)
Q Consensus        64 ~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~  141 (318)
                      -|.+.|+.+.-+   ..+++.+++.||.++.|.... ....-+.-+..|-+.+.+++.+.+  +.++.+... |+.++++
T Consensus         7 mhrd~i~hv~~t---ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~d--g~L~~Sv~d~Dhs~Kvf   81 (558)
T KOG0882|consen    7 MHRDVITHVFPT---KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYD--GWLFRSVEDPDHSVKVF   81 (558)
T ss_pred             cccceeeeEeee---hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhcccc--ceeEeeccCcccceeEE
Confidence            388888888643   478999999999999997443 111111123457888999999988  678888777 9999999


Q ss_pred             EeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762         142 TYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      |+.+-+-   ...++ ..-.+-..+..+|..              ..+..-++.-.++.|.|+|.....+.....-.-|.
T Consensus        82 DvEn~Dm---inmiKL~~lPg~a~wv~skGd--------------~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~  144 (558)
T KOG0882|consen   82 DVENFDM---INMIKLVDLPGFAEWVTSKGD--------------KISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHF  144 (558)
T ss_pred             Eeeccch---hhhcccccCCCceEEecCCCC--------------eeeeEEeecccCCCcEEECCcCCcCccceeccccc
Confidence            8854321   10111 011111122223321              00122344456778999986554332333335699


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-------ceeeE---Ee---eecCCcEEEEEEcCCCCEEEEEe
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-------TWTPF---IM---NTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------~~~~~---~~---~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      .+|.++.++|.    +..++|....|-|.-|..+...       .+...   .+   ..-.....++.|+|+|..+++-+
T Consensus       145 sPV~~i~y~qa----~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~  220 (558)
T KOG0882|consen  145 SPVKKIRYNQA----GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLN  220 (558)
T ss_pred             CceEEEEeecc----ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccC
Confidence            99999999996    6678888888999999987411       01000   01   11124577999999999999999


Q ss_pred             CCCeEEEEEECCCCceEEEee
Q psy2762         288 GDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       288 ~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      .|..||++...++...+.+.|
T Consensus       221 ~DrkVR~F~~KtGklvqeiDE  241 (558)
T KOG0882|consen  221 PDRKVRGFVFKTGKLVQEIDE  241 (558)
T ss_pred             cccEEEEEEeccchhhhhhhc
Confidence            999999999888766665554

>KOG4190|consensus

Probab=98.69  E-value=6.5e-08  Score=87.72  Aligned_cols=205  Identities=16%  Similarity=0.261  Sum_probs=132.1

Q ss_pred             EEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC-----cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762          58 LIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG-----NWFKYYEYNNHDSSVNSIAWAPKEFGLILACG  132 (318)
Q Consensus        58 ~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg  132 (318)
                      .+..+.||+..|..+.-.  .+.+-++|++.|++|++|.++..     ...+.+++..|+.+|.++.|-.+  ..+++  
T Consensus       727 rL~nf~GH~~~iRai~Ai--dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~--lr~i~--  800 (1034)
T KOG4190|consen  727 RLCNFTGHQEKIRAIAAI--DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLAD--LRSIA--  800 (1034)
T ss_pred             eeecccCcHHHhHHHHhc--ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeec--cceee--
Confidence            367788999998887643  24678999999999999987542     22477888899999999999987  44554  


Q ss_pred             ecCCeEEEEEeecCCCCcceeeec-ccc--cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762         133 SSDGTISFLTYMSDTNSWESRKIA-AHT--IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK  209 (318)
Q Consensus       133 s~d~~i~i~~~~~~~~~~~~~~~~-~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~  209 (318)
                      +.|+-|-+||+..+..- ...... .|.  ..+.++   |+.              +..-.+|.++...+|+++|.+..+
T Consensus       801 ScD~giHlWDPFigr~L-aq~~dapk~~a~~~ikcl---~nv--------------~~~iliAgcsaeSTVKl~DaRsce  862 (1034)
T KOG4190|consen  801 SCDGGIHLWDPFIGRLL-AQMEDAPKEGAGGNIKCL---ENV--------------DRHILIAGCSAESTVKLFDARSCE  862 (1034)
T ss_pred             eccCcceeecccccchh-HhhhcCcccCCCceeEec---ccC--------------cchheeeeccchhhheeeeccccc
Confidence            56889999997544310 000001 111  112222   110              001235556888899999998877


Q ss_pred             EEEEEEc---ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc---ceeeEEeeecCCcEEEEEEcCCCCEE
Q psy2762         210 WIEETKL---ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV---TWTPFIMNTFDDVVWNVSWSLTGDIL  283 (318)
Q Consensus       210 ~~~~~~~---~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~---~~~~~~~~~~~~~v~~v~~spdg~~l  283 (318)
                      +......   .+.+..++++...|.    |..++.+=..|.|-+.|.+++.   .|+|.+-.     ...++ .|..+.|
T Consensus       863 ~~~E~kVcna~~Pna~~R~iaVa~~----GN~lAa~LSnGci~~LDaR~G~vINswrpmecd-----llqla-apsdq~L  932 (1034)
T KOG4190|consen  863 WTCELKVCNAPGPNALTRAIAVADK----GNKLAAALSNGCIAILDARNGKVINSWRPMECD-----LLQLA-APSDQAL  932 (1034)
T ss_pred             ceeeEEeccCCCCchheeEEEeccC----cchhhHHhcCCcEEEEecCCCceeccCCcccch-----hhhhc-CchhHHH
Confidence            6554433   456677999999996    7788888889999999987754   34332110     11111 2344556


Q ss_pred             EEEeCCCeEEE-EE
Q psy2762         284 TVSCGDNSVSL-WK  296 (318)
Q Consensus       284 ~s~~~D~~v~i-W~  296 (318)
                      +....|.++.+ |.
T Consensus       933 ~~saldHslaVnWh  946 (1034)
T KOG4190|consen  933 AQSALDHSLAVNWH  946 (1034)
T ss_pred             HhhcccceeEeeeh
Confidence            66666666666 64

>KOG4714|consensus

Probab=98.67  E-value=7.5e-07  Score=73.85  Aligned_cols=164  Identities=15%  Similarity=0.178  Sum_probs=98.4

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC--
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY--   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~--   88 (318)
                      -|+++=.+-+.+-.++.++++..||.+.+++.+.-.+.       ...+.  .-|.+.- +..+.+  .++.+.++..  
T Consensus        87 ~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~-------~~~i~--~~~~~~a-s~~~~~--~~~~i~s~~~g~  154 (319)
T KOG4714|consen   87 KNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLAL-------MSRIP--SIHSGSA-SRKICR--HGNSILSGGCGN  154 (319)
T ss_pred             ccCCCCCcccccccCCceEecCCCceEEEEechHHHhh-------hhhcc--ccccccc-ccceee--cccEEecCCcce
Confidence            34444444445556788999999999999987521000       00000  0111111 111111  1344433221  


Q ss_pred             ---CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          89 ---DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        89 ---Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                         -+..++|+++........+.  ....|.+++-+|.. +.++++|+.||.+.+||.+...  ...-.++.|..++..+
T Consensus       155 ~n~~d~~~a~~~~p~~t~~~~~~--~~~~v~~l~~hp~q-q~~v~cgt~dg~~~l~d~rn~~--~p~S~l~ahk~~i~eV  229 (319)
T KOG4714|consen  155 WNAQDNFYANTLDPIKTLIPSKK--ALDAVTALCSHPAQ-QHLVCCGTDDGIVGLWDARNVA--MPVSLLKAHKAEIWEV  229 (319)
T ss_pred             Eeeccceeeeccccccccccccc--ccccchhhhCCccc-ccEEEEecCCCeEEEEEccccc--chHHHHHHhhhhhhhe
Confidence               12334555443221111111  12348899999975 6789999999999999986653  2334566899999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG  207 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~  207 (318)
                      -|+|..                ...|.++++||.+-.||..+
T Consensus       230 ~FHpk~----------------p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  230 HFHPKN----------------PEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             eccCCC----------------chheeEecCCCcEEEEcCCC
Confidence            999964                35799999999999998654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.64  E-value=6e-07  Score=76.26  Aligned_cols=229  Identities=12%  Similarity=0.196  Sum_probs=125.6

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---EEEEEEecCCC------------cCeEEEEeeCCCCCcEEE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---WFKYYEYNNHD------------SSVNSIAWAPKEFGLILA  130 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---~~~~~~~~~h~------------~~v~~v~~~p~~~~~~la  130 (318)
                      .+.|+++.|..  .|.+|++|.-.|.|.++.-....   ..-...+++|.            ..|+.|.|..+..-..+.
T Consensus        26 ad~ItaVefd~--tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL  103 (460)
T COG5170          26 ADKITAVEFDE--TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL  103 (460)
T ss_pred             cceeeEEEecc--ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence            45688999964  48999999888999999654322   11112234443            467888887654333455


Q ss_pred             EeecCCeEEEEEeecCCCC-cceeeec-c-c---ccccce---------------eeeCCCC--CCCccccccCCCCCCc
Q psy2762         131 CGSSDGTISFLTYMSDTNS-WESRKIA-A-H---TIGCNA---------------VSWGPGI--GSLSELDLKGSKLGGV  187 (318)
Q Consensus       131 sgs~d~~i~i~~~~~~~~~-~~~~~~~-~-h---~~~v~~---------------~~~~p~~--~~~~~~~~~~~~~~~~  187 (318)
                      ..+.|++|++|.+....-. .....+. + |   .+++.+               ++--|..  .......+.+..++. 
T Consensus       104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns-  182 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS-  182 (460)
T ss_pred             EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC-
Confidence            5678999999987543200 0000000 0 0   000000               0000000  000000111111111 


Q ss_pred             cceEEEecCCCeEEEEEccCCe-EEEEEEcccCC-----CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-e
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDK-WIEETKLENHS-----DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-T  260 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~-~~~~~~~~~h~-----~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~  260 (318)
                      .+.....+.|=.|.+|+++.-. ......++.|+     ..|++-.|+|.   .-..+.-.+..|.|++-|++..... .
T Consensus       183 D~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~---~cn~fmYSsSkG~Ikl~DlRq~alcdn  259 (460)
T COG5170         183 DKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPE---MCNVFMYSSSKGEIKLNDLRQSALCDN  259 (460)
T ss_pred             chheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHh---HcceEEEecCCCcEEehhhhhhhhccC
Confidence            1234445677789999876421 12233333343     45788899997   3456777788999999998742200 0


Q ss_pred             eEE-----e--------eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         261 PFI-----M--------NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       261 ~~~-----~--------~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +..     +        ......|..+.|+|+|+++++-. --+|+|||.+-..
T Consensus       260 ~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k  312 (460)
T COG5170         260 SKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAK  312 (460)
T ss_pred             chhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEeccccc
Confidence            000     0        11124588899999999998665 3599999987643

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.59  E-value=5.2e-05  Score=64.08  Aligned_cols=113  Identities=15%  Similarity=0.125  Sum_probs=67.3

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC----CcEEEEEECCCe
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF----GTLLASCSYDRK   91 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~----~~~las~s~Dg~   91 (318)
                      =+.++||||+.+||.+...|+|+|||+... +.....+.. .   ....-+.+|..+.|.....    ...|..-.++|.
T Consensus        46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~-~lf~I~p~~-~---~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~  120 (282)
T PF15492_consen   46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGS-ELFVIPPAM-S---FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQ  120 (282)
T ss_pred             heEEEECCCCcEEEEEcCCCeEEEEecccc-eeEEcCccc-c---cCCccccceeeeEeeccccccccceeEEEEeccce
Confidence            356899999999999999999999998621 111111100 0   0011245566676753211    235667778888


Q ss_pred             EEEEeCCC---CcEE--EEEEecC-CCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          92 VIIWRGDN---GNWF--KYYEYNN-HDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        92 v~vWd~~~---~~~~--~~~~~~~-h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      ++-+-+..   ....  ..+.+.. ++..|+++.++|.+ ..+++.|..
T Consensus       121 L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h-~LLlVgG~~  168 (282)
T PF15492_consen  121 LRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH-RLLLVGGCE  168 (282)
T ss_pred             eeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC-CEEEEeccC
Confidence            88776532   1222  2333433 46789999999974 444444443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.58  E-value=4.6e-05  Score=78.06  Aligned_cols=201  Identities=10%  Similarity=0.101  Sum_probs=122.6

Q ss_pred             eeeeeecCCCCEEEEe-eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc--c---------------ccCeEEEEecCC
Q psy2762          16 IHDAEMDYLGLYLATC-SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--H---------------SGPVWQVAWAHP   77 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~-s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--h---------------~~~V~~v~~~~~   77 (318)
                      ...++++++++.|+.+ ...+.|+++|....            .+.++.+  .               -..-+.+++++ 
T Consensus       626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~------------~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp-  692 (1057)
T PLN02919        626 PQGLAYNAKKNLLYVADTENHALREIDFVNE------------TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEP-  692 (1057)
T ss_pred             CcEEEEeCCCCEEEEEeCCCceEEEEecCCC------------EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEec-
Confidence            4678888888755444 44578999987522            1222211  0               01235678863 


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCcEEEEEEec-------CC------CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee
Q psy2762          78 QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYN-------NH------DSSVNSIAWAPKEFGLILACGSSDGTISFLTYM  144 (318)
Q Consensus        78 ~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~-------~h------~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~  144 (318)
                      .++.++++.+.++.|++||..++.. ..+.-.       ++      -.....|+++|++ +.++++-+.++.|++||+.
T Consensus       693 ~~g~LyVad~~~~~I~v~d~~~g~v-~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG-~~LYVADs~n~~Irv~D~~  770 (1057)
T PLN02919        693 VNEKVYIAMAGQHQIWEYNISDGVT-RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDL-KELYIADSESSSIRALDLK  770 (1057)
T ss_pred             CCCeEEEEECCCCeEEEEECCCCeE-EEEecCCccccCCCCccccccccCccEEEEeCCC-CEEEEEECCCCeEEEEECC
Confidence            3577788888899999999876542 211100       00      1234679999984 3466777778999999874


Q ss_pred             cCCCCcceeeecc-cc---------------------cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762         145 SDTNSWESRKIAA-HT---------------------IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       145 ~~~~~~~~~~~~~-h~---------------------~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                      .+..    ..+.+ ..                     .....++++|+                 +..+++-+.++.|++
T Consensus       771 tg~~----~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~d-----------------G~LYVADs~N~rIrv  829 (1057)
T PLN02919        771 TGGS----RLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKD-----------------GQIYVADSYNHKIKK  829 (1057)
T ss_pred             CCcE----EEEEecccccCcccccccCCCCchhhhhccCCceeeEeCC-----------------CcEEEEECCCCEEEE
Confidence            3321    00000 00                     00122333332                 456788888999999


Q ss_pred             EEccCCeEEEEEEc-----------ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762         203 WKQEGDKWIEETKL-----------ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       203 wd~~~~~~~~~~~~-----------~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                      ||..++........           .+.-.....|+++|+    |.++++-+.++.|++|++.+.
T Consensus       830 iD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~d----G~lyVaDt~Nn~Irvid~~~~  890 (1057)
T PLN02919        830 LDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGEN----GRLFVADTNNSLIRYLDLNKG  890 (1057)
T ss_pred             EECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCC----CCEEEEECCCCEEEEEECCCC
Confidence            99887654322210           111224678999996    778888889999999998764

>KOG1912|consensus

Probab=98.53  E-value=3.9e-05  Score=72.72  Aligned_cols=248  Identities=16%  Similarity=0.158  Sum_probs=146.3

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC----------CCc
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ----------FGT   81 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~----------~~~   81 (318)
                      |..+-.++.++|.|- ||-|+ -..|.|-|.-           ..+.+.+++.|...|+.+.|.+..          ..-
T Consensus        14 ~~sN~~A~Dw~~~GL-iAygs-hslV~VVDs~-----------s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~l   80 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSGL-IAYGS-HSLVSVVDSR-----------SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQL   80 (1062)
T ss_pred             CcccccccccCccce-EEEec-CceEEEEehh-----------hhhhhhccccCccceeEEEeccCCCchhccCccccce
Confidence            345567788999884 44444 4577777763           346788999999999999997421          123


Q ss_pred             EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--CcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          82 LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--GLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +||++...|.|.+||...+.  .+..+..|..++..+.|-|...  -.++++-....+|.+|+...+.+-|+  .-.+| 
T Consensus        81 liAsaD~~GrIil~d~~~~s--~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk--~~ys~-  155 (1062)
T KOG1912|consen   81 LIASADISGRIILVDFVLAS--VINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWK--YDYSH-  155 (1062)
T ss_pred             eEEeccccCcEEEEEehhhh--hhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeec--cccCC-
Confidence            77888888999999987664  3335667888999998876322  24666667778999998766653332  11122 


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-------CeEEEEEEc--------------cc
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-------DKWIEETKL--------------EN  218 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-------~~~~~~~~~--------------~~  218 (318)
                      ....++.+.|..                ...+..-+..|.+-+-+...       ++..++.+-              ..
T Consensus       156 ~iLs~f~~DPfd----------------~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns  219 (1062)
T KOG1912|consen  156 EILSCFRVDPFD----------------SRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNS  219 (1062)
T ss_pred             cceeeeeeCCCC----------------cceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhcccc
Confidence            233445666642                12233333334444443211       011111110              00


Q ss_pred             CC------CC---eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC--CEEEEEe
Q psy2762         219 HS------DW---VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG--DILTVSC  287 (318)
Q Consensus       219 h~------~~---V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg--~~l~s~~  287 (318)
                      ++      ..   .-.++|+|.+    +.+.-.-.-+-+.|+|++-..+  .....-..+.+.-|.|-||+  ..|.+..
T Consensus       220 ~ts~~~sa~fity~a~faf~p~~----rn~lfi~~prellv~dle~~~~--l~vvpier~~akfv~vlP~~~rd~LfclH  293 (1062)
T KOG1912|consen  220 TTSTPASAYFITYCAQFAFSPHW----RNILFITFPRELLVFDLEYECC--LAVVPIERGGAKFVDVLPDPRRDALFCLH  293 (1062)
T ss_pred             ccCCCcchhHHHHHHhhhcChhh----hceEEEEeccceEEEcchhhce--eEEEEeccCCcceeEeccCCCcceEEEEe
Confidence            10      01   1135677763    2233344567788998865432  12221122344567777775  5589999


Q ss_pred             CCCeEEEEEECC
Q psy2762         288 GDNSVSLWKENT  299 (318)
Q Consensus       288 ~D~~v~iW~~~~  299 (318)
                      .||.+.||-...
T Consensus       294 ~nG~ltirvrk~  305 (1062)
T KOG1912|consen  294 SNGRLTIRVRKE  305 (1062)
T ss_pred             cCCeEEEEEeec
Confidence            999999998655

>KOG2314|consensus

Probab=98.51  E-value=2.2e-05  Score=71.63  Aligned_cols=100  Identities=17%  Similarity=0.320  Sum_probs=62.8

Q ss_pred             CcceeeeeeecCCCCEEEEeeC-----------CCcEEEEEcCCCcCCCCCCCCcceEEEEecc--cccCeEE-EEecCC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSS-----------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--HSGPVWQ-VAWAHP   77 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~-----------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~-v~~~~~   77 (318)
                      |+ .|.-+.|||+.+||+|-|.           -..++|||+.+           |.+.+++..  -.-.++- ..|++ 
T Consensus       249 Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~t-----------G~lkrsF~~~~~~~~~WP~frWS~-  315 (698)
T KOG2314|consen  249 HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIAT-----------GLLKRSFPVIKSPYLKWPIFRWSH-  315 (698)
T ss_pred             CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccc-----------cchhcceeccCCCccccceEEecc-
Confidence            44 6788999999999999762           26799999973           444445443  2233333 58886 


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE
Q psy2762          78 QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA  130 (318)
Q Consensus        78 ~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la  130 (318)
                       |++++|--.. ..|.|++..+  ....-.-.-....|...+|+|.  ..+||
T Consensus       316 -DdKy~Arm~~-~sisIyEtps--f~lld~Kslki~gIr~FswsP~--~~llA  362 (698)
T KOG2314|consen  316 -DDKYFARMTG-NSISIYETPS--FMLLDKKSLKISGIRDFSWSPT--SNLLA  362 (698)
T ss_pred             -CCceeEEecc-ceEEEEecCc--eeeecccccCCccccCcccCCC--cceEE
Confidence             4788887766 5678887543  1111000112355788889987  34444

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.49  E-value=3.4e-05  Score=69.79  Aligned_cols=244  Identities=13%  Similarity=0.158  Sum_probs=136.5

Q ss_pred             eeeeeeecCCCCEEEEeeCC---------------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccC--eE-EEEecC
Q psy2762          15 MIHDAEMDYLGLYLATCSSD---------------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP--VW-QVAWAH   76 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D---------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~--V~-~v~~~~   76 (318)
                      .|..+.|+|.++||.|=+.-               +.+.|||..           .+.++.++.+-..+  .| -+.|+-
T Consensus        73 ~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~-----------sg~iv~sf~~~~q~~~~Wp~~k~s~  141 (561)
T COG5354          73 DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIA-----------SGMIVFSFNGISQPYLGWPVLKFSI  141 (561)
T ss_pred             CceecccCcccceeeeeccCCccChhhccCCccccCceeEEecc-----------CceeEeeccccCCcccccceeeeee
Confidence            68889999999999986543               348999987           35677777766655  55 577763


Q ss_pred             CCCCcEEEEEECCCeEEEEeCCCCcEE--EEEEecCCCcCeEEEEeeCCCCCcEEEE-----eecCCeEEEEEeecCCCC
Q psy2762          77 PQFGTLLASCSYDRKVIIWRGDNGNWF--KYYEYNNHDSSVNSIAWAPKEFGLILAC-----GSSDGTISFLTYMSDTNS  149 (318)
Q Consensus        77 ~~~~~~las~s~Dg~v~vWd~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~las-----gs~d~~i~i~~~~~~~~~  149 (318)
                        +.+++|=- ....+.|+++ +....  ....+  -...+...+|+|.+....||.     ....+++++|.+-... .
T Consensus       142 --~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~l--r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s-~  214 (561)
T COG5354         142 --DDKYVARV-VGSSLYIHEI-TDNIEEHPFKNL--RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNS-V  214 (561)
T ss_pred             --cchhhhhh-ccCeEEEEec-CCccccCchhhc--cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCC-e
Confidence              34444433 3457888886 32211  11111  124577788888633333332     3445667777653111 0


Q ss_pred             cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEc
Q psy2762         150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWA  229 (318)
Q Consensus       150 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s  229 (318)
                      ...+.+.  ...-..+.|.+....+........+.+.  .|+    ....++|++++.+.+ +  ....-.++|.+++|+
T Consensus       215 l~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnK--syf----gesnLyl~~~~e~~i-~--V~~~~~~pVhdf~W~  283 (561)
T COG5354         215 LVTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNK--SYF----GESNLYLLRITERSI-P--VEKDLKDPVHDFTWE  283 (561)
T ss_pred             eeeeeeE--eecccEEEEecCCceEEEEEEEeeeccc--cee----ccceEEEEeeccccc-c--eeccccccceeeeec
Confidence            0011111  1112345566643222111111111111  112    113688888775432 1  112557889999999


Q ss_pred             cCCCCCccEEEEE--eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC---eEEEEE
Q psy2762         230 PSWGLSKCMIASC--SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN---SVSLWK  296 (318)
Q Consensus       230 p~~~~~~~~l~s~--s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~---~v~iW~  296 (318)
                      |.    +..++.+  -.+.++.++++....     .....++.=+.+.|||.+++++.++-|+   .+-||+
T Consensus       284 p~----S~~F~vi~g~~pa~~s~~~lr~Nl-----~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~  346 (561)
T COG5354         284 PL----SSRFAVISGYMPASVSVFDLRGNL-----RFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFD  346 (561)
T ss_pred             cc----CCceeEEecccccceeecccccce-----EEecCCcccccccccCcccEEEEecCCccccceEEec
Confidence            97    3444444  478899999887642     1223344556778888888888877654   677776

>KOG4714|consensus

Probab=98.47  E-value=6.1e-07  Score=74.40  Aligned_cols=103  Identities=15%  Similarity=0.383  Sum_probs=74.0

Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc----------
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV----------  257 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~----------  257 (318)
                      .+.+++|+.||.+-+||.+... .+...+..|+.++..|-|+|.   ++..|.++++||.+.-||..+..          
T Consensus       192 q~~v~cgt~dg~~~l~d~rn~~-~p~S~l~ahk~~i~eV~FHpk---~p~~Lft~sedGslw~wdas~~~l~i~~~~s~~  267 (319)
T KOG4714|consen  192 QHLVCCGTDDGIVGLWDARNVA-MPVSLLKAHKAEIWEVHFHPK---NPEHLFTCSEDGSLWHWDASTTFLSISNQASVI  267 (319)
T ss_pred             ccEEEEecCCCeEEEEEccccc-chHHHHHHhhhhhhheeccCC---CchheeEecCCCcEEEEcCCCceEEecCccccc
Confidence            3679999999999999988763 345567899999999999998   68899999999999999987421          


Q ss_pred             -ceee-------EEeee-cCC---cEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         258 -TWTP-------FIMNT-FDD---VVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       258 -~~~~-------~~~~~-~~~---~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                       .|..       ..+.+ ...   .|++  |.=-|..|++|++-+.|.+.+
T Consensus       268 s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  268 SSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             cccccCCcccceEeeeccccccceeeee--eeccCceEEeccccceEEEec
Confidence             1100       00111 111   2443  334588999998877777664

>KOG2695|consensus

Probab=98.45  E-value=6.2e-07  Score=77.10  Aligned_cols=160  Identities=17%  Similarity=0.267  Sum_probs=102.6

Q ss_pred             EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC--
Q psy2762          71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN--  148 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~--  148 (318)
                      .++|+-...+.. ++.|.+..|.+-|.+++-   .+.+. ..+.|.++.|...  +.++.+|..+|.|...|++.+.+  
T Consensus       216 ~CawSlni~gyh-fs~G~sqqv~L~nvetg~---~qsf~-sksDVfAlQf~~s--~nLv~~GcRngeI~~iDLR~rnqG~  288 (425)
T KOG2695|consen  216 SCAWSLNIMGYH-FSVGLSQQVLLTNVETGH---QQSFQ-SKSDVFALQFAGS--DNLVFNGCRNGEIFVIDLRCRNQGN  288 (425)
T ss_pred             hhhhhhccceee-ecccccceeEEEEeeccc---ccccc-cchhHHHHHhccc--CCeeEecccCCcEEEEEeeecccCC
Confidence            346654334556 677778888888887762   22233 4667888888875  56888999999999999876532  


Q ss_pred             CcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEE
Q psy2762         149 SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVA  227 (318)
Q Consensus       149 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~  227 (318)
                      .|.. ...-|...++++.--.              +  .+++|.+.+.+|+|++||.+--++ .-..+++||-   +...
T Consensus       289 ~~~a-~rlyh~Ssvtslq~Lq--------------~--s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHv---N~~a  348 (425)
T KOG2695|consen  289 GWCA-QRLYHDSSVTSLQILQ--------------F--SQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHV---NLSA  348 (425)
T ss_pred             Ccce-EEEEcCcchhhhhhhc--------------c--ccceEeeccCcCceeEeeehhhhcccceeeeeccc---cccc
Confidence            1221 1123444444432111              0  146889999999999999763221 2246688994   4444


Q ss_pred             EccCC-CCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         228 WAPSW-GLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       228 ~sp~~-~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                      ..|-. .+....++++|+|...|||.+....
T Consensus       349 ~l~~~v~~eeg~I~s~GdDcytRiWsl~~gh  379 (425)
T KOG2695|consen  349 YLPAHVKEEEGSIFSVGDDCYTRIWSLDSGH  379 (425)
T ss_pred             ccccccccccceEEEccCeeEEEEEecccCc
Confidence            44311 1235578889999999999988654

>KOG4532|consensus

Probab=98.43  E-value=4e-05  Score=64.15  Aligned_cols=151  Identities=13%  Similarity=0.037  Sum_probs=98.9

Q ss_pred             EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC--eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE-E
Q psy2762          27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP--VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW-F  103 (318)
Q Consensus        27 ~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~-~  103 (318)
                      .+..++.|.++++.+++..             ......|...  +.++++++  +++++++.+....|-.|-+..... .
T Consensus       130 ~~~i~sndht~k~~~~~~~-------------s~~~~~h~~~~~~ns~~~sn--d~~~~~~Vgds~~Vf~y~id~~sey~  194 (344)
T KOG4532|consen  130 PLNIASNDHTGKTMVVSGD-------------SNKFAVHNQNLTQNSLHYSN--DPSWGSSVGDSRRVFRYAIDDESEYI  194 (344)
T ss_pred             ceeeccCCcceeEEEEecC-------------cccceeeccccceeeeEEcC--CCceEEEecCCCcceEEEeCCcccee
Confidence            3556788999999998632             1112234443  77888874  599999999999999998765432 2


Q ss_pred             EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-ee-ecccccccceeeeCCCCCCCccccccC
Q psy2762         104 KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RK-IAAHTIGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       104 ~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                      ...........-.+.+|+..  ...+|++..||++.|||++...-.... .. ...|.+.+..+.|+|.. ++       
T Consensus       195 ~~~~~a~t~D~gF~~S~s~~--~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g-~l-------  264 (344)
T KOG4532|consen  195 ENIYEAPTSDHGFYNSFSEN--DLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYG-LL-------  264 (344)
T ss_pred             eeeEecccCCCceeeeeccC--cceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCC-cc-------
Confidence            22223334556678899976  678999999999999999765421111 11 12467778889999842 11       


Q ss_pred             CCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762         182 SKLGGVAKRLVSGGCDNLIKIWKQEGDK  209 (318)
Q Consensus       182 ~~~~~~~~~lasgs~d~~i~iwd~~~~~  209 (318)
                             ..|.-.-.-+.+++-|+++..
T Consensus       265 -------DLLf~sEhfs~~hv~D~R~~~  285 (344)
T KOG4532|consen  265 -------DLLFISEHFSRVHVVDTRNYV  285 (344)
T ss_pred             -------eEEEEecCcceEEEEEcccCc
Confidence                   233333333568888877653

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.41  E-value=0.001  Score=61.55  Aligned_cols=197  Identities=12%  Similarity=-0.032  Sum_probs=110.7

Q ss_pred             CeEEEEecCCCCCcE-EEEEECC---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEE
Q psy2762          68 PVWQVAWAHPQFGTL-LASCSYD---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFL  141 (318)
Q Consensus        68 ~V~~v~~~~~~~~~~-las~s~D---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~  141 (318)
                      ....-.|++  +|+. ++..+.+   ..|.++|+.+++..++..   ..+.....+|+||+. .++.+.+.++  .|.++
T Consensus       189 ~~~~p~wSp--DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~---~~g~~~~~~~SPDG~-~la~~~~~~g~~~Iy~~  262 (419)
T PRK04043        189 LNIFPKWAN--KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS---SQGMLVVSDVSKDGS-KLLLTMAPKGQPDIYLY  262 (419)
T ss_pred             CeEeEEECC--CCCcEEEEEEccCCCCEEEEEECCCCcEEEEec---CCCcEEeeEECCCCC-EEEEEEccCCCcEEEEE
Confidence            677889974  4763 6655554   357777887776444432   345566778999952 3444444444  45555


Q ss_pred             EeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCC--eEEEEEccCCeEEEEEEccc
Q psy2762         142 TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDN--LIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~--~i~iwd~~~~~~~~~~~~~~  218 (318)
                      +...+    ....+..+........|+|+.                 +.|+-. ...+  .|.+.|+.+++..+. ...+
T Consensus       263 dl~~g----~~~~LT~~~~~d~~p~~SPDG-----------------~~I~F~Sdr~g~~~Iy~~dl~~g~~~rl-t~~g  320 (419)
T PRK04043        263 DTNTK----TLTQITNYPGIDVNGNFVEDD-----------------KRIVFVSDRLGYPNIFMKKLNSGSVEQV-VFHG  320 (419)
T ss_pred             ECCCC----cEEEcccCCCccCccEECCCC-----------------CEEEEEECCCCCceEEEEECCCCCeEeC-ccCC
Confidence            54222    233444333223445799973                 333333 2334  466667776654222 2222


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCC---------CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC-
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQD---------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-  288 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D---------~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~-  288 (318)
                      ..    ...|||+    |..|+-.+..         ..|.+.++.+..   ...+... ......+|+|||+.|+-... 
T Consensus       321 ~~----~~~~SPD----G~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---~~~LT~~-~~~~~p~~SPDG~~I~f~~~~  388 (419)
T PRK04043        321 KN----NSSVSTY----KNYIVYSSRETNNEFGKNTFNLYLISTNSDY---IRRLTAN-GVNQFPRFSSDGGSIMFIKYL  388 (419)
T ss_pred             Cc----CceECCC----CCEEEEEEcCCCcccCCCCcEEEEEECCCCC---eEECCCC-CCcCCeEECCCCCEEEEEEcc
Confidence            21    2489996    6666666544         256777776543   2223221 22336899999998876664 


Q ss_pred             CCeEEEEEECCCCceE
Q psy2762         289 DNSVSLWKENTDGAWQ  304 (318)
Q Consensus       289 D~~v~iW~~~~~~~~~  304 (318)
                      .+.-.|+-++..|...
T Consensus       389 ~~~~~L~~~~l~g~~~  404 (419)
T PRK04043        389 GNQSALGIIRLNYNKS  404 (419)
T ss_pred             CCcEEEEEEecCCCee
Confidence            4455677777776543

>KOG1645|consensus

Probab=98.41  E-value=2.1e-05  Score=69.16  Aligned_cols=80  Identities=13%  Similarity=0.300  Sum_probs=67.9

Q ss_pred             ecCCCcceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +..+|...|..++|+|... +|..++.+++|+|.|+++           ..++.++..| ..+|+++|..+ +..++..|
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet-----------~~~vssy~a~-~~~wSC~wDld-e~h~IYaG  254 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET-----------SCVVSSYIAY-NQIWSCCWDLD-ERHVIYAG  254 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEEEeccc-----------ceeeeheecc-CCceeeeeccC-CcceeEEe
Confidence            5578899999999999887 788899999999999973           3567777777 89999999865 47788888


Q ss_pred             ECCCeEEEEeCCCC
Q psy2762          87 SYDRKVIIWRGDNG  100 (318)
Q Consensus        87 s~Dg~v~vWd~~~~  100 (318)
                      -..|.|.|+|++..
T Consensus       255 l~nG~VlvyD~R~~  268 (463)
T KOG1645|consen  255 LQNGMVLVYDMRQP  268 (463)
T ss_pred             ccCceEEEEEccCC
Confidence            88999999998754

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.32  E-value=0.0014  Score=55.52  Aligned_cols=220  Identities=17%  Similarity=0.252  Sum_probs=115.1

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC---eEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP---VWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      ++.+++|++||. -+|..|-|=...+.         -...+...+-..++   =.-++|++  |+.+||.+...|+|+++
T Consensus         3 ~~~~~~Gk~lAi-~qd~~iEiRsa~Dd---------f~si~~kcqVpkD~~PQWRkl~WSp--D~tlLa~a~S~G~i~vf   70 (282)
T PF15492_consen    3 LALSSDGKLLAI-LQDQCIEIRSAKDD---------FSSIIGKCQVPKDPNPQWRKLAWSP--DCTLLAYAESTGTIRVF   70 (282)
T ss_pred             eeecCCCcEEEE-EeccEEEEEeccCC---------chheeEEEecCCCCCchheEEEECC--CCcEEEEEcCCCeEEEE
Confidence            567889998875 56777777544321         11222322323222   34689984  59999999999999999


Q ss_pred             eCCCCcEEEEEEecC-------CCcCeEEEEeeCCCC----CcEEEEeecCCeEEEEEeecCC-CCcc-ee--eec-ccc
Q psy2762          96 RGDNGNWFKYYEYNN-------HDSSVNSIAWAPKEF----GLILACGSSDGTISFLTYMSDT-NSWE-SR--KIA-AHT  159 (318)
Q Consensus        96 d~~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~----~~~lasgs~d~~i~i~~~~~~~-~~~~-~~--~~~-~h~  159 (318)
                      |+-....   +.++.       -...|..+.|-+...    ...|..-..+|.++-+-+..+. +... ..  .+. .+.
T Consensus        71 dl~g~~l---f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp  147 (282)
T PF15492_consen   71 DLMGSEL---FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYP  147 (282)
T ss_pred             eccccee---EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCC
Confidence            9875432   12211       123455555654320    0123344556666654432221 1111 11  122 245


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-----------eEEEEEccCCeEEEEEEcccCCCCeeEEEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-----------LIKIWKQEGDKWIEETKLENHSDWVRDVAW  228 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-----------~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~  228 (318)
                      .++..+.|+|.                 .+.|+.||...           -+--|++-++.                   
T Consensus       148 ~Gi~~~vy~p~-----------------h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~-------------------  191 (282)
T PF15492_consen  148 HGINSAVYHPK-----------------HRLLLVGGCEQNQDGMSKASSCGLTAWRILSDS-------------------  191 (282)
T ss_pred             CceeEEEEcCC-----------------CCEEEEeccCCCCCccccccccCceEEEEcCCC-------------------
Confidence            67888888885                 23344443322           12233322221                   


Q ss_pred             ccCCCCCccEEEEEeCCCe------EEEEEcCCCcceeeEE-eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         229 APSWGLSKCMIASCSQDRK------VIIWTSNDYVTWTPFI-MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~------i~vw~~~~~~~~~~~~-~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                       |.     ...++...|..      -.+|..-...   ... ....++.|..++.||||+.||+...+|.+-+|++-
T Consensus       192 -Py-----yk~v~~~~~~~~~~~~~~~~~~~~~~~---~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iP  259 (282)
T PF15492_consen  192 -PY-----YKQVTSSEDDITASSKRRGLLRIPSFK---FFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIP  259 (282)
T ss_pred             -Cc-----EEEccccCccccccccccceeecccee---eeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecC
Confidence             10     01111111211      1222211100   011 12245789999999999999999999999999863

>KOG2314|consensus

Probab=98.30  E-value=0.0002  Score=65.59  Aligned_cols=250  Identities=16%  Similarity=0.231  Sum_probs=140.2

Q ss_pred             eeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC---------
Q psy2762          18 DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY---------   88 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~---------   88 (318)
                      -+.|||.|.||+|-=. .-|.+|-=+           ....+..+ .|. .|.-+.|+|  ..++|+|=|.         
T Consensus       215 yv~wSP~GTYL~t~Hk-~GI~lWGG~-----------~f~r~~RF-~Hp-~Vq~idfSP--~EkYLVT~s~~p~~~~~~d  278 (698)
T KOG2314|consen  215 YVRWSPKGTYLVTFHK-QGIALWGGE-----------SFDRIQRF-YHP-GVQFIDFSP--NEKYLVTYSPEPIIVEEDD  278 (698)
T ss_pred             eEEecCCceEEEEEec-cceeeecCc-----------cHHHHHhc-cCC-CceeeecCC--ccceEEEecCCccccCccc
Confidence            4789999999998654 457899421           11122222 244 367788874  3788888664         


Q ss_pred             --CCeEEEEeCCCCcEEEEEEecCCCcCe-EEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccce
Q psy2762          89 --DRKVIIWRGDNGNWFKYYEYNNHDSSV-NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNA  164 (318)
Q Consensus        89 --Dg~v~vWd~~~~~~~~~~~~~~h~~~v-~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~  164 (318)
                        ...++|||+.+|.....+........+ .-+.||.|  .+++|....+ .|.|++...    ..+...+ ....+|..
T Consensus       279 ~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~D--dKy~Arm~~~-sisIyEtps----f~lld~Kslki~gIr~  351 (698)
T KOG2314|consen  279 NEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHD--DKYFARMTGN-SISIYETPS----FMLLDKKSLKISGIRD  351 (698)
T ss_pred             CCCceEEEEEccccchhcceeccCCCccccceEEeccC--CceeEEeccc-eEEEEecCc----eeeecccccCCccccC
Confidence              257999999998654443321112222 24689988  6788887775 567776421    1111111 23346777


Q ss_pred             eeeCCCCCCCc--------------cccccC--------------C--CCCCccceEEE----------ecCCCeEEEEE
Q psy2762         165 VSWGPGIGSLS--------------ELDLKG--------------S--KLGGVAKRLVS----------GGCDNLIKIWK  204 (318)
Q Consensus       165 ~~~~p~~~~~~--------------~~~~~~--------------~--~~~~~~~~las----------gs~d~~i~iwd  204 (318)
                      .+|+|....+.              .+.+..              .  .....|.+|+.          .+.-..+.|+.
T Consensus       352 FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfr  431 (698)
T KOG2314|consen  352 FSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFR  431 (698)
T ss_pred             cccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEE
Confidence            77877521100              000000              0  01122344442          22223455666


Q ss_pred             ccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-C--CCeEEEEEcCC-CcceeeEEeeecC-CcEEEEEEcCC
Q psy2762         205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-Q--DRKVIIWTSND-YVTWTPFIMNTFD-DVVWNVSWSLT  279 (318)
Q Consensus       205 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~--D~~i~vw~~~~-~~~~~~~~~~~~~-~~v~~v~~spd  279 (318)
                      ++.+.. +.-.. .-.+.|...+|-|.    |..++.-+ .  -.++++|.++. ...  +.+...++ ..-++|.|+|.
T Consensus       432 ireKdI-pve~v-elke~vi~FaWEP~----gdkF~vi~g~~~k~tvsfY~~e~~~~~--~~lVk~~dk~~~N~vfwsPk  503 (698)
T KOG2314|consen  432 IREKDI-PVEVV-ELKESVIAFAWEPH----GDKFAVISGNTVKNTVSFYAVETNIKK--PSLVKELDKKFANTVFWSPK  503 (698)
T ss_pred             eeccCC-Cceee-ecchheeeeeeccC----CCeEEEEEccccccceeEEEeecCCCc--hhhhhhhcccccceEEEcCC
Confidence            554431 11111 23456888999997    34343333 2  35688998773 221  22222222 35678999999


Q ss_pred             CCEEEEEe---CCCeEEEEEEC
Q psy2762         280 GDILTVSC---GDNSVSLWKEN  298 (318)
Q Consensus       280 g~~l~s~~---~D~~v~iW~~~  298 (318)
                      |++++.++   .-|.+.++|.+
T Consensus       504 G~fvvva~l~s~~g~l~F~D~~  525 (698)
T KOG2314|consen  504 GRFVVVAALVSRRGDLEFYDTD  525 (698)
T ss_pred             CcEEEEEEecccccceEEEecc
Confidence            99988764   46889999866

>KOG2114|consensus

Probab=98.27  E-value=0.00064  Score=65.47  Aligned_cols=196  Identities=13%  Similarity=0.120  Sum_probs=123.8

Q ss_pred             ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEEECCCe-----EEE
Q psy2762          21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASCSYDRK-----VII   94 (318)
Q Consensus        21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~s~Dg~-----v~v   94 (318)
                      +++.+..++.|+.||.|-+.+..            -+.+..+++|... |..+...  .+-.+|+|-+.|+.     ++|
T Consensus        31 ~~s~~~~vvigt~~G~V~~Ln~s------------~~~~~~fqa~~~siv~~L~~~--~~~~~L~sv~Ed~~~np~llki   96 (933)
T KOG2114|consen   31 CSSSTGSVVIGTADGRVVILNSS------------FQLIRGFQAYEQSIVQFLYIL--NKQNFLFSVGEDEQGNPVLLKI   96 (933)
T ss_pred             EcCCCceEEEeeccccEEEeccc------------ceeeehheecchhhhhHhhcc--cCceEEEEEeecCCCCceEEEE
Confidence            58889999999999988777642            2455778887766 5555432  23468999888864     999


Q ss_pred             EeCCCC---c-EEEE-----EEecCC--CcCeEEEEeeCCCCCcEEEEeecCCeEEEEE--eecCCCCcceeeecccccc
Q psy2762          95 WRGDNG---N-WFKY-----YEYNNH--DSSVNSIAWAPKEFGLILACGSSDGTISFLT--YMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        95 Wd~~~~---~-~~~~-----~~~~~h--~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~--~~~~~~~~~~~~~~~h~~~  161 (318)
                      |+++..   . +.+.     +.....  +.++.+++++.+  -..+|+|=.+|.|.++.  +..+... .......-..+
T Consensus        97 w~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~--l~~Iv~Gf~nG~V~~~~GDi~RDrgs-r~~~~~~~~~p  173 (933)
T KOG2114|consen   97 WDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED--LKTIVCGFTNGLVICYKGDILRDRGS-RQDYSHRGKEP  173 (933)
T ss_pred             ecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEcc--ccEEEEEecCcEEEEEcCcchhcccc-ceeeeccCCCC
Confidence            997543   1 2222     221222  567889999987  67899999999998863  2111111 11111123356


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      |+.+.+..+..               ...+|+  .-..|.+|.+.++. .....+..|...++|.+|++.    ...|+.
T Consensus       174 ITgL~~~~d~~---------------s~lFv~--Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~----t~qfIc  231 (933)
T KOG2114|consen  174 ITGLALRSDGK---------------SVLFVA--TTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDG----TYQFIC  231 (933)
T ss_pred             ceeeEEecCCc---------------eeEEEE--ecceeEEEEecCCC-cceeeeccCCccceeeecCCC----CccEEE
Confidence            77777654320               111222  23468999888665 234457788889999999984    333655


Q ss_pred             EeCCCeEEEEEcCCC
Q psy2762         242 CSQDRKVIIWTSNDY  256 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~  256 (318)
                      ++ +..+.+|+..+.
T Consensus       232 a~-~e~l~fY~sd~~  245 (933)
T KOG2114|consen  232 AG-SEFLYFYDSDGR  245 (933)
T ss_pred             ec-CceEEEEcCCCc
Confidence            54 455899988764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.26  E-value=0.00079  Score=60.80  Aligned_cols=117  Identities=13%  Similarity=0.149  Sum_probs=90.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCC-cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDH-TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      -||.+.|.=..+..+++-++.|..|| .+-|+|...            ..+..+...-+.|.++..++  +|++++.+-.
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~------------~e~kr~e~~lg~I~av~vs~--dGK~~vvaNd  421 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDG------------GEVKRIEKDLGNIEAVKVSP--DGKKVVVAND  421 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCC------------ceEEEeeCCccceEEEEEcC--CCcEEEEEcC
Confidence            47888899999988888889999999 899999862            24566777889999999863  5899999887


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----eEEEEEee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----TISFLTYM  144 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----~i~i~~~~  144 (318)
                      -..+-+.|++++....+-+  .-.+-|..++|+|+  ...+|-+=-+|    .|+++|..
T Consensus       422 r~el~vididngnv~~idk--S~~~lItdf~~~~n--sr~iAYafP~gy~tq~Iklydm~  477 (668)
T COG4946         422 RFELWVIDIDNGNVRLIDK--SEYGLITDFDWHPN--SRWIAYAFPEGYYTQSIKLYDMD  477 (668)
T ss_pred             ceEEEEEEecCCCeeEecc--cccceeEEEEEcCC--ceeEEEecCcceeeeeEEEEecC
Confidence            7888888999886433222  23567999999998  56777665555    56777764

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.25  E-value=0.0015  Score=59.73  Aligned_cols=189  Identities=12%  Similarity=0.141  Sum_probs=98.0

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCe-----EEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV-----NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      +..++.++.|+.+..||..+++.  ++++.......     .+.... +  + .+..+..++.+..+|...+...|....
T Consensus       145 ~~~v~v~~~~g~l~a~d~~tG~~--~W~~~~~~~~~~~~~~~sp~~~-~--~-~v~~~~~~g~v~ald~~tG~~~W~~~~  218 (377)
T TIGR03300       145 NGLVVVRTNDGRLTALDAATGER--LWTYSRVTPALTLRGSASPVIA-D--G-GVLVGFAGGKLVALDLQTGQPLWEQRV  218 (377)
T ss_pred             CCEEEEECCCCeEEEEEcCCCce--eeEEccCCCceeecCCCCCEEE-C--C-EEEEECCCCEEEEEEccCCCEeeeecc
Confidence            45667777899999999988763  33332211111     011111 1  2 456677788887777655543332110


Q ss_pred             ecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         155 IAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       155 ~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                      -.... ..+..+.           .....+.-. +..+..++.++.++.||.++++..=.......    .....     
T Consensus       219 ~~~~g~~~~~~~~-----------~~~~~p~~~-~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~----~~p~~-----  277 (377)
T TIGR03300       219 ALPKGRTELERLV-----------DVDGDPVVD-GGQVYAVSYQGRVAALDLRSGRVLWKRDASSY----QGPAV-----  277 (377)
T ss_pred             ccCCCCCchhhhh-----------ccCCccEEE-CCEEEEEEcCCEEEEEECCCCcEEEeeccCCc----cCceE-----
Confidence            00000 0000000           000000000 24677788899999999988753222221111    11111     


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCc-ceeeEEeeecCCc-EEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYV-TWTPFIMNTFDDV-VWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~-~~~~~~~~~~~~~-v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                       .+..+..++.|+.+..+|..+.. .|...   ..... ..+...  .+..|+.++.||.|.+++..++.
T Consensus       278 -~~~~vyv~~~~G~l~~~d~~tG~~~W~~~---~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~  341 (377)
T TIGR03300       278 -DDNRLYVTDADGVVVALDRRSGSELWKND---ELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGS  341 (377)
T ss_pred             -eCCEEEEECCCCeEEEEECCCCcEEEccc---cccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCC
Confidence             24567778899999999987643 12211   11111 111111  46688889999999999977754

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.24  E-value=0.00031  Score=63.77  Aligned_cols=240  Identities=12%  Similarity=0.134  Sum_probs=139.7

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      -.-++..+++||.|.||++.-. .-|.+|.-..          ..++ ..+.  ...|..+.|++  .+++|.+-+....
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~----------~~~l-~~~~--~~~V~~~~fSP--~~kYL~tw~~~pi   94 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHA-AGVECWGGPS----------KAKL-VRFR--HPDVKYLDFSP--NEKYLVTWSREPI   94 (561)
T ss_pred             cCcchhheeecCcchheehhhc-cceEEccccc----------hhhe-eeee--cCCceecccCc--ccceeeeeccCCc
Confidence            3457888999999999998654 4578887541          2233 3332  34588899974  4899999876544


Q ss_pred             ---------------EEEEeCCCCcEEEEEEecCCCcC--eE-EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          92 ---------------VIIWRGDNGNWFKYYEYNNHDSS--VN-SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        92 ---------------v~vWd~~~~~~~~~~~~~~h~~~--v~-~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                                     +.+||+.++..+..+.  ....+  .. -+.|+-++  .++|=. ....+.|+++..........
T Consensus        95 ~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~--~~~q~~~~Wp~~k~s~~D--~y~ARv-v~~sl~i~e~t~n~~~~p~~  169 (561)
T COG5354          95 IEPEIEISPFTSKNNVFVWDIASGMIVFSFN--GISQPYLGWPVLKFSIDD--KYVARV-VGSSLYIHEITDNIEEHPFK  169 (561)
T ss_pred             cChhhccCCccccCceeEEeccCceeEeecc--ccCCcccccceeeeeecc--hhhhhh-ccCeEEEEecCCccccCchh
Confidence                           9999999887544333  32232  33 46777763  344433 33457787752221111111


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEE-----EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEE
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV-----SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW  228 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la-----sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~  228 (318)
                      .+  ...++...+|+|...               +..||     ..+.+++++||.+-.+......++..-.  =..+.|
T Consensus       170 ~l--r~~gi~dFsisP~~n---------------~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~--~~qLkW  230 (561)
T COG5354         170 NL--RPVGILDFSISPEGN---------------HDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVS--GVQLKW  230 (561)
T ss_pred             hc--cccceeeEEecCCCC---------------CceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeec--ccEEEE
Confidence            11  135677888888631               11222     2466778888886654433333332211  125677


Q ss_pred             ccCCCCCccEEEE-Ee----------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEE
Q psy2762         229 APSWGLSKCMIAS-CS----------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLW  295 (318)
Q Consensus       229 sp~~~~~~~~l~s-~s----------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW  295 (318)
                      .+.    |.+|.. .-          ...++.|+++....   ........++|.+++|.|+++.++..+  .+.++.++
T Consensus       231 ~~~----g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~---i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~  303 (561)
T COG5354         231 QVL----GKYLLVLVMTHTKSNKSYFGESNLYLLRITERS---IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVF  303 (561)
T ss_pred             ecC----CceEEEEEEEeeecccceeccceEEEEeecccc---cceeccccccceeeeecccCCceeEEecccccceeec
Confidence            775    333321 11          12346677665432   112224568999999999999887766  46677777


Q ss_pred             EEC
Q psy2762         296 KEN  298 (318)
Q Consensus       296 ~~~  298 (318)
                      ++.
T Consensus       304 ~lr  306 (561)
T COG5354         304 DLR  306 (561)
T ss_pred             ccc
Confidence            753

>KOG2041|consensus

Probab=98.23  E-value=4.8e-06  Score=78.03  Aligned_cols=158  Identities=19%  Similarity=0.393  Sum_probs=113.1

Q ss_pred             cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce------------eeecccccccceeeeCCCCCCCcccccc
Q psy2762         113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES------------RKIAAHTIGCNAVSWGPGIGSLSELDLK  180 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~------------~~~~~h~~~v~~~~~~p~~~~~~~~~~~  180 (318)
                      ....|++|+..  .-++|+|+.||.+++..+.........            +.+.+|...|.-+.|.-.          
T Consensus        15 vkL~c~~WNke--~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~----------   82 (1189)
T KOG2041|consen   15 VKLHCAEWNKE--SGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNEN----------   82 (1189)
T ss_pred             ceEEEEEEccc--CCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccc----------
Confidence            45789999987  458999999999999876544321111            234578888888888764          


Q ss_pred             CCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee
Q psy2762         181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT  260 (318)
Q Consensus       181 ~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~  260 (318)
                             -+.|-|...+|.|-+|-+-.+.|.+.-.-....+.|.+++|+.+    |+.|..+=+||.|.|=.+++.+.|.
T Consensus        83 -------~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~d----G~kIcIvYeDGavIVGsvdGNRIwg  151 (1189)
T KOG2041|consen   83 -------NQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLD----GTKICIVYEDGAVIVGSVDGNRIWG  151 (1189)
T ss_pred             -------cccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCC----CcEEEEEEccCCEEEEeeccceecc
Confidence                   25688889999999998877776443322345567899999986    7777777777777776666554332


Q ss_pred             eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       261 ~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      .. +.+  .....|.||||.+.++-+-..|...++|
T Consensus       152 Ke-Lkg--~~l~hv~ws~D~~~~Lf~~ange~hlyd  184 (1189)
T KOG2041|consen  152 KE-LKG--QLLAHVLWSEDLEQALFKKANGETHLYD  184 (1189)
T ss_pred             hh-cch--heccceeecccHHHHHhhhcCCcEEEec
Confidence            21 221  1244799999998888788889999998

>KOG2066|consensus

Probab=98.22  E-value=0.00014  Score=69.37  Aligned_cols=186  Identities=17%  Similarity=0.209  Sum_probs=117.6

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +.++|+++  .++.|+-|..+|.|++++..            ++. .+...|+..        +.+|.+++|||.||+|.
T Consensus        40 D~is~~av--~~~~~~~GtH~g~v~~~~~~------------~~~-~~~~~~s~~--------~~~Gey~asCS~DGkv~   96 (846)
T KOG2066|consen   40 DAISCCAV--HDKFFALGTHRGAVYLTTCQ------------GNP-KTNFDHSSS--------ILEGEYVASCSDDGKVV   96 (846)
T ss_pred             hHHHHHHh--hcceeeeccccceEEEEecC------------Ccc-ccccccccc--------ccCCceEEEecCCCcEE
Confidence            34455555  35688999999999999875            222 344445433        34699999999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCC---CCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPK---EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~---~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      |--+.+.+....+.+   ..++.+|+++|+   .....+++|+.-| +.++.-..-. .+....+..-.++|.++.|.- 
T Consensus        97 I~sl~~~~~~~~~df---~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlg-nk~~v~l~~~eG~I~~i~W~g-  170 (846)
T KOG2066|consen   97 IGSLFTDDEITQYDF---KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLG-NKDSVVLSEGEGPIHSIKWRG-  170 (846)
T ss_pred             EeeccCCccceeEec---CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhc-CccceeeecCccceEEEEecC-
Confidence            987766654444443   467999999997   1235788888887 5554321111 111112223446788888863 


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC------CeeEEEEccCCCCCccEEEEEeC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD------WVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~------~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                                        .+||=++.+| |+|||...++...  .++-...      .-..+.|.++     ..|+ -|+
T Consensus       171 ------------------~lIAWand~G-v~vyd~~~~~~l~--~i~~p~~~~R~e~fpphl~W~~~-----~~LV-IGW  223 (846)
T KOG2066|consen  171 ------------------NLIAWANDDG-VKVYDTPTRQRLT--NIPPPSQSVRPELFPPHLHWQDE-----DRLV-IGW  223 (846)
T ss_pred             ------------------cEEEEecCCC-cEEEeccccceee--ccCCCCCCCCcccCCCceEecCC-----CeEE-Eec
Confidence                              5677777665 8999987664322  2211112      2345778774     2333 567


Q ss_pred             CCeEEEEEcCC
Q psy2762         245 DRKVIIWTSND  255 (318)
Q Consensus       245 D~~i~vw~~~~  255 (318)
                      -.+|+|..+++
T Consensus       224 ~d~v~i~~I~~  234 (846)
T KOG2066|consen  224 GDSVKICSIKK  234 (846)
T ss_pred             CCeEEEEEEec
Confidence            78899998874

>KOG2066|consensus

Probab=98.20  E-value=2.8e-05  Score=73.91  Aligned_cols=190  Identities=15%  Similarity=0.171  Sum_probs=120.4

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      .+.+.|+++.    ++.|+-|.-+|.|.+.+.+...   ...+ -|...        +..+.++++|+.||.|.|-...+
T Consensus        39 ~D~is~~av~----~~~~~~GtH~g~v~~~~~~~~~---~~~~-~~s~~--------~~~Gey~asCS~DGkv~I~sl~~  102 (846)
T KOG2066|consen   39 NDAISCCAVH----DKFFALGTHRGAVYLTTCQGNP---KTNF-DHSSS--------ILEGEYVASCSDDGKVVIGSLFT  102 (846)
T ss_pred             hhHHHHHHhh----cceeeeccccceEEEEecCCcc---cccc-ccccc--------ccCCceEEEecCCCcEEEeeccC
Confidence            4567777763    6899999999999999866431   1112 23322        44488999999999998866544


Q ss_pred             CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCee
Q psy2762         146 DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVR  224 (318)
Q Consensus       146 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~  224 (318)
                      +...    ..-....++.+++++|+-.            ....+.+++||.-| +.++... -+.. ....+..-.++|.
T Consensus       103 ~~~~----~~~df~rpiksial~Pd~~------------~~~sk~fv~GG~ag-lvL~er~wlgnk-~~v~l~~~eG~I~  164 (846)
T KOG2066|consen  103 DDEI----TQYDFKRPIKSIALHPDFS------------RQQSKQFVSGGMAG-LVLSERNWLGNK-DSVVLSEGEGPIH  164 (846)
T ss_pred             Cccc----eeEecCCcceeEEeccchh------------hhhhhheeecCcce-EEEehhhhhcCc-cceeeecCccceE
Confidence            4321    1112345788999999721            11135799999988 7776421 0111 1123445567899


Q ss_pred             EEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee----eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         225 DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT----PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       225 ~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~----~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +|+|.      |.+||=++.+| |+|||........    +......+..-.++.|.++.+++  -|+..+|+|..+.
T Consensus       165 ~i~W~------g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LV--IGW~d~v~i~~I~  233 (846)
T KOG2066|consen  165 SIKWR------GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLV--IGWGDSVKICSIK  233 (846)
T ss_pred             EEEec------CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEE--EecCCeEEEEEEe
Confidence            99995      66899888888 7999987754211    00001111234578898776544  4566689999876

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.20  E-value=0.0029  Score=54.15  Aligned_cols=226  Identities=12%  Similarity=0.067  Sum_probs=131.2

Q ss_pred             eeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          17 HDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        17 ~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      .++.|.+ ++.++++--..+.|..|+....           . ...+....  ...+.+..+ ++ .|+.+..++. .++
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~-----------~-~~~~~~~~--~~G~~~~~~-~g-~l~v~~~~~~-~~~   65 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTG-----------E-VEVIDLPG--PNGMAFDRP-DG-RLYVADSGGI-AVV   65 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTT-----------E-EEEEESSS--EEEEEEECT-TS-EEEEEETTCE-EEE
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCC-----------e-EEEEecCC--CceEEEEcc-CC-EEEEEEcCce-EEE
Confidence            3567887 7888888778899999988632           2 22222222  556666433 34 4555555554 444


Q ss_pred             eCCCCcEEEEEEec--C-CCcCeEEEEeeCCCCCcEEEEeecCCe------EEEEEeecCCCCcceeeecccccccceee
Q psy2762          96 RGDNGNWFKYYEYN--N-HDSSVNSIAWAPKEFGLILACGSSDGT------ISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        96 d~~~~~~~~~~~~~--~-h~~~v~~v~~~p~~~~~~lasgs~d~~------i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      |+.+++........  . .....+.+++.|+  +.+.++......      =.+|.+..+ .  +...+.......+.++
T Consensus        66 d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~--G~ly~t~~~~~~~~~~~~g~v~~~~~~-~--~~~~~~~~~~~pNGi~  140 (246)
T PF08450_consen   66 DPDTGKVTVLADLPDGGVPFNRPNDVAVDPD--GNLYVTDSGGGGASGIDPGSVYRIDPD-G--KVTVVADGLGFPNGIA  140 (246)
T ss_dssp             ETTTTEEEEEEEEETTCSCTEEEEEEEE-TT--S-EEEEEECCBCTTCGGSEEEEEEETT-S--EEEEEEEEESSEEEEE
T ss_pred             ecCCCcEEEEeeccCCCcccCCCceEEEcCC--CCEEEEecCCCccccccccceEEECCC-C--eEEEEecCcccccceE
Confidence            98887665555542  2 3456899999998  666666554321      134444333 1  2222222333457889


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC--CeEEE---EEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIE---ETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~--~~~~~---~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      |+|+.                ...+++-+..+.|..+++..  .+...   ...+..-....-.+++..+    |.+.++
T Consensus       141 ~s~dg----------------~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~----G~l~va  200 (246)
T PF08450_consen  141 FSPDG----------------KTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSD----GNLWVA  200 (246)
T ss_dssp             EETTS----------------SEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTT----S-EEEE
T ss_pred             ECCcc----------------hheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCC----CCEEEE
Confidence            99973                12455778888899988753  21211   2223333234677899885    777777


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE-cCCCCEEEEEe
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW-SLTGDILTVSC  287 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~-spdg~~l~s~~  287 (318)
                      .-..+.|.+++.+...   ...+......+.+++| -|+.+.|..++
T Consensus       201 ~~~~~~I~~~~p~G~~---~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  201 DWGGGRIVVFDPDGKL---LREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             EETTTEEEEEETTSCE---EEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             EcCCCEEEEECCCccE---EEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            7788999999987532   2222222357889999 46766665543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.13  E-value=0.0015  Score=59.02  Aligned_cols=170  Identities=15%  Similarity=0.150  Sum_probs=112.9

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-eEEEEeCCCCcE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-KVIIWRGDNGNW  102 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-~v~vWd~~~~~~  102 (318)
                      +|.+++..|. |..-|.+...           +-.+.  -+|.+.|.-.++..  +++-++-|..|| .+-|+|..++..
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~-----------~~~iq--v~~~~~VrY~r~~~--~~e~~vigt~dgD~l~iyd~~~~e~  394 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWD-----------GYSIQ--VGKKGGVRYRRIQV--DPEGDVIGTNDGDKLGIYDKDGGEV  394 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCC-----------CeeEE--cCCCCceEEEEEcc--CCcceEEeccCCceEEEEecCCceE
Confidence            6888888875 5566665431           11221  25777788888763  467889999999 899999887753


Q ss_pred             EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccC
Q psy2762         103 FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       103 ~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                      ..   +.+.-+.|.++..+|+  ++.++.+.....|-+.|+.+++    .+.+. ....-+....|+|+           
T Consensus       395 kr---~e~~lg~I~av~vs~d--GK~~vvaNdr~el~vididngn----v~~idkS~~~lItdf~~~~n-----------  454 (668)
T COG4946         395 KR---IEKDLGNIEAVKVSPD--GKKVVVANDRFELWVIDIDNGN----VRLIDKSEYGLITDFDWHPN-----------  454 (668)
T ss_pred             EE---eeCCccceEEEEEcCC--CcEEEEEcCceEEEEEEecCCC----eeEecccccceeEEEEEcCC-----------
Confidence            22   3455678999999998  7778777776677677775543    22332 33345788999997           


Q ss_pred             CCCCCccceEEEecCCC----eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         182 SKLGGVAKRLVSGGCDN----LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       182 ~~~~~~~~~lasgs~d~----~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                            +.+||-+-.+|    .|+++|+.+++.....+-.+|       .|+|.+..++++|.--
T Consensus       455 ------sr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~-------DfsPaFD~d~ryLYfL  506 (668)
T COG4946         455 ------SRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAY-------DFSPAFDPDGRYLYFL  506 (668)
T ss_pred             ------ceeEEEecCcceeeeeEEEEecCCCeEEEecCCccc-------ccCcccCCCCcEEEEE
Confidence                  46677666555    699999998876554443333       4555544456655433

>KOG2695|consensus

Probab=98.11  E-value=2.3e-05  Score=67.69  Aligned_cols=155  Identities=14%  Similarity=0.142  Sum_probs=99.4

Q ss_pred             EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC----cEEE
Q psy2762          29 ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG----NWFK  104 (318)
Q Consensus        29 ~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~----~~~~  104 (318)
                      ++.|.+..|-+-|++.+            .-..+. -++.|.++.|.  ..+.++.-|...|.|.+.|++.+    .+ +
T Consensus       228 fs~G~sqqv~L~nvetg------------~~qsf~-sksDVfAlQf~--~s~nLv~~GcRngeI~~iDLR~rnqG~~~-~  291 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETG------------HQQSFQ-SKSDVFALQFA--GSDNLVFNGCRNGEIFVIDLRCRNQGNGW-C  291 (425)
T ss_pred             ecccccceeEEEEeecc------------cccccc-cchhHHHHHhc--ccCCeeEecccCCcEEEEEeeecccCCCc-c
Confidence            44555666667666522            112222 45678888884  24789999999999999998754    22 2


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      ...+ -|.+.|+++..-..+ +..|.+.+.+|.|++||.+.-+....++...+|...-..+.++-+.+            
T Consensus       292 a~rl-yh~Ssvtslq~Lq~s-~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~e------------  357 (425)
T KOG2695|consen  292 AQRL-YHDSSVTSLQILQFS-QQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEE------------  357 (425)
T ss_pred             eEEE-EcCcchhhhhhhccc-cceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccc------------
Confidence            2222 378889988766522 45677779999999999865443223444556654333333222211            


Q ss_pred             CCccceEEEecCCCeEEEEEccCCeEEEEEEc
Q psy2762         185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL  216 (318)
Q Consensus       185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~  216 (318)
                         ...+++++.|...|||.++.+.+.....+
T Consensus       358 ---eg~I~s~GdDcytRiWsl~~ghLl~tipf  386 (425)
T KOG2695|consen  358 ---EGSIFSVGDDCYTRIWSLDSGHLLCTIPF  386 (425)
T ss_pred             ---cceEEEccCeeEEEEEecccCceeeccCC
Confidence               23688899999999999998876544443

>KOG1920|consensus

Probab=98.10  E-value=0.0012  Score=65.82  Aligned_cols=227  Identities=17%  Similarity=0.286  Sum_probs=126.4

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      .+.|.++.|-.  +..-++.+..+|.|.+-|.++.......   .-...|.+.+|+||  +.+++-.+..+++.+.....
T Consensus        68 d~~i~s~~fl~--d~~~i~v~~~~G~iilvd~et~~~eivg---~vd~GI~aaswS~D--ee~l~liT~~~tll~mT~~f  140 (1265)
T KOG1920|consen   68 DDEIVSVQFLA--DTNSICVITALGDIILVDPETLELEIVG---NVDNGISAASWSPD--EELLALITGRQTLLFMTKDF  140 (1265)
T ss_pred             CcceEEEEEec--ccceEEEEecCCcEEEEcccccceeeee---eccCceEEEeecCC--CcEEEEEeCCcEEEEEeccc
Confidence            36788888853  4677778888999998888766443322   24577999999999  56777777777877643210


Q ss_pred             CCCCcceeeecc---cccccceeeeCCCCCCCc------------------c-ccccC----CCCCCccceEEE-----e
Q psy2762         146 DTNSWESRKIAA---HTIGCNAVSWGPGIGSLS------------------E-LDLKG----SKLGGVAKRLVS-----G  194 (318)
Q Consensus       146 ~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~~------------------~-~~~~~----~~~~~~~~~las-----g  194 (318)
                      ..  ...+.+..   ..+....+-|....-+..                  . .+...    ..+.+.|+++|+     .
T Consensus       141 ~~--i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~  218 (1265)
T KOG1920|consen  141 EP--IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESE  218 (1265)
T ss_pred             cc--hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEecc
Confidence            00  00011100   001111222322100000                  0 00000    122334677776     2


Q ss_pred             cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe---CCCeEEEEEcCCCcceeeEEeeecCC-c
Q psy2762         195 GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS---QDRKVIIWTSNDYVTWTPFIMNTFDD-V  270 (318)
Q Consensus       195 s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s---~D~~i~vw~~~~~~~~~~~~~~~~~~-~  270 (318)
                      ..-++|||||.+ +.+ + ..-+.-...=.+++|-|.    |..+++..   .|..|.++.-.+.+...-......+. .
T Consensus       219 ~~~RkirV~drE-g~L-n-s~se~~~~l~~~LsWkPs----gs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~  291 (1265)
T KOG1920|consen  219 TGTRKIRVYDRE-GAL-N-STSEPVEGLQHSLSWKPS----GSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKE  291 (1265)
T ss_pred             CCceeEEEeccc-chh-h-cccCcccccccceeecCC----CCeEeeeeecCCCCcEEEEecCCccccccccCCcccccc
Confidence            333799999976 221 1 111111122348999996    77777765   35679999766543211111112233 3


Q ss_pred             EEEEEEcCCCCEEEE---EeCCCeEEEEEECCCCceEEEeee
Q psy2762         271 VWNVSWSLTGDILTV---SCGDNSVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       271 v~~v~~spdg~~l~s---~~~D~~v~iW~~~~~~~~~~~~~~  309 (318)
                      |..++|+-++..||.   ......|++|-... ++|=.=.++
T Consensus       292 ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N-yhWYLKq~l  332 (1265)
T KOG1920|consen  292 VEELAWNSNSDILAVVTSNLENSLVQLWTTGN-YHWYLKQEL  332 (1265)
T ss_pred             hheeeecCCCCceeeeecccccceEEEEEecC-eEEEEEEEE
Confidence            899999999999988   45555699997443 466554444

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.09  E-value=0.0024  Score=58.35  Aligned_cols=180  Identities=12%  Similarity=0.034  Sum_probs=92.2

Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc--C---eEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS--S---VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~--~---v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      ..++.+..++.+..+|+.+++..-...+....+  .   ...+.-+|--.+..+..++.++.+..+|...++..|...  
T Consensus       191 ~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~--  268 (377)
T TIGR03300       191 GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRD--  268 (377)
T ss_pred             CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeec--
Confidence            456777888999999988876321111110000  0   000111110002245566778888888875544222211  


Q ss_pred             cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE-EcccCCCCeeEEEEccCCCC
Q psy2762         156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET-KLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~-~~~~h~~~V~~v~~sp~~~~  234 (318)
                        ... ..    .|..               .+..+..++.||.|..+|..+++..-.. .+.+.  .......      
T Consensus       269 --~~~-~~----~p~~---------------~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~--~~ssp~i------  318 (377)
T TIGR03300       269 --ASS-YQ----GPAV---------------DDNRLYVTDADGVVVALDRRSGSELWKNDELKYR--QLTAPAV------  318 (377)
T ss_pred             --cCC-cc----CceE---------------eCCEEEEECCCCeEEEEECCCCcEEEccccccCC--ccccCEE------
Confidence              000 00    1100               0246778889999999999877532111 11111  1111111      


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      .+..|+.++.|+.|.+++..+...  ......+...+.+--...++ .|..++.||.|..+
T Consensus       319 ~g~~l~~~~~~G~l~~~d~~tG~~--~~~~~~~~~~~~~sp~~~~~-~l~v~~~dG~l~~~  376 (377)
T TIGR03300       319 VGGYLVVGDFEGYLHWLSREDGSF--VARLKTDGSGIASPPVVVGD-GLLVQTRDGDLYAF  376 (377)
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCE--EEEEEcCCCccccCCEEECC-EEEEEeCCceEEEe
Confidence            245788899999999999876431  11222222222222122244 57778899988765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.07  E-value=0.0042  Score=54.05  Aligned_cols=212  Identities=12%  Similarity=0.147  Sum_probs=112.6

Q ss_pred             CcEEEEEECCCe-EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-----CCeEEEEEeecCCCCccee
Q psy2762          80 GTLLASCSYDRK-VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-----DGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        80 ~~~las~s~Dg~-v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-----d~~i~i~~~~~~~~~~~~~  153 (318)
                      +..++.+=.-|+ ..+||..+++......-..-....-.-.|+|+  +.+|.+.-.     .|.|.+||....-  ..+.
T Consensus        17 ~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~d--G~~LytTEnd~~~g~G~IgVyd~~~~~--~ri~   92 (305)
T PF07433_consen   17 PEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPD--GRLLYTTENDYETGRGVIGVYDAARGY--RRIG   92 (305)
T ss_pred             CeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCC--CCEEEEeccccCCCcEEEEEEECcCCc--EEEe
Confidence            344444444332 44677777654332221110111224578998  555655433     4789999975221  1234


Q ss_pred             eecccccccceeeeCCCCCCCcccc--ccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc--ccCCCCeeEEEEc
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELD--LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL--ENHSDWVRDVAWA  229 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~--~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~--~~h~~~V~~v~~s  229 (318)
                      ++..|..+--.+.+.|+...+-...  +...+-.. -..|=....+..+-..|..+++......+  .-|.-.|+-+++.
T Consensus        93 E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~G-R~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~  171 (305)
T PF07433_consen   93 EFPSHGIGPHELLLMPDGETLVVANGGIETHPDSG-RAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVD  171 (305)
T ss_pred             EecCCCcChhhEEEcCCCCEEEEEcCCCccCcccC-ceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEec
Confidence            4556666666777888642211110  01111000 01233344455666667777776666667  4577889999999


Q ss_pred             cCCCCCccEEEEEeCCCe-------EEEEEcCCCcce---eeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC
Q psy2762         230 PSWGLSKCMIASCSQDRK-------VIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN  298 (318)
Q Consensus       230 p~~~~~~~~l~s~s~D~~-------i~vw~~~~~~~~---~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~  298 (318)
                      ++    |..+...=..+-       |-+++.......   .......+...+-||+++++|..++.+| ..+.+.+||..
T Consensus       172 ~~----G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~  247 (305)
T PF07433_consen  172 GD----GTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAA  247 (305)
T ss_pred             CC----CcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECC
Confidence            86    443333222221       223322221100   0001123457899999999999887666 68899999865


Q ss_pred             CC
Q psy2762         299 TD  300 (318)
Q Consensus       299 ~~  300 (318)
                      ++
T Consensus       248 tg  249 (305)
T PF07433_consen  248 TG  249 (305)
T ss_pred             CC
Confidence            54

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.03  E-value=0.0061  Score=51.51  Aligned_cols=216  Identities=15%  Similarity=0.125  Sum_probs=114.5

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecc---cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKG---HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN  110 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~  110 (318)
                      +|+|..||..           +|+.+-...-   ..+.+.. .. .  ++.+++.++.++.+..||+.+++..-...+..
T Consensus         2 ~g~l~~~d~~-----------tG~~~W~~~~~~~~~~~~~~-~~-~--~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~   66 (238)
T PF13360_consen    2 DGTLSALDPR-----------TGKELWSYDLGPGIGGPVAT-AV-P--DGGRVYVASGDGNLYALDAKTGKVLWRFDLPG   66 (238)
T ss_dssp             TSEEEEEETT-----------TTEEEEEEECSSSCSSEEET-EE-E--ETTEEEEEETTSEEEEEETTTSEEEEEEECSS
T ss_pred             CCEEEEEECC-----------CCCEEEEEECCCCCCCccce-EE-E--eCCEEEEEcCCCEEEEEECCCCCEEEEeeccc
Confidence            6788888875           3455444322   2222211 21 1  35677788999999999998887443333322


Q ss_pred             CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc---cceeeeCCCCCCCccccccCCCCCCc
Q psy2762         111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG---CNAVSWGPGIGSLSELDLKGSKLGGV  187 (318)
Q Consensus       111 h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~---v~~~~~~p~~~~~~~~~~~~~~~~~~  187 (318)
                      .....  .... +  + .+..++.++.|..+|...++..|..........+   .....+.                   
T Consensus        67 ~~~~~--~~~~-~--~-~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-------------------  121 (238)
T PF13360_consen   67 PISGA--PVVD-G--G-RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD-------------------  121 (238)
T ss_dssp             CGGSG--EEEE-T--T-EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE-------------------
T ss_pred             cccce--eeec-c--c-ccccccceeeeEecccCCcceeeeeccccccccccccccCceEe-------------------
Confidence            11111  1222 2  2 3455567778888876555433321111000000   0011111                   


Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcccCCC--Ce-------eEEEEccCCCCCccEEEEEeCCCe-EEEEEcCCCc
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD--WV-------RDVAWAPSWGLSKCMIASCSQDRK-VIIWTSNDYV  257 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~--~V-------~~v~~sp~~~~~~~~l~s~s~D~~-i~vw~~~~~~  257 (318)
                      +..++.+..++.|..+|.++++..-.........  .+       ..+.+.     ++ .+..++.++. +.+ |+.+..
T Consensus       122 ~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~v~~~~~~g~~~~~-d~~tg~  194 (238)
T PF13360_consen  122 GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-----DG-RVYVSSGDGRVVAV-DLATGE  194 (238)
T ss_dssp             TTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-----TT-EEEEECCTSSEEEE-ETTTTE
T ss_pred             cCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-----CC-EEEEEcCCCeEEEE-ECCCCC
Confidence            2467778889999999999887543333322111  01       122222     24 5555666664 566 887754


Q ss_pred             ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      .  . .... ...+.. ...+++..|+.++.|+.|.+||..++.
T Consensus       195 ~--~-w~~~-~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  195 K--L-WSKP-ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             E--E-EEEC-SS-ECE-CEECCCTEEEEEETTTEEEEEETTTTE
T ss_pred             E--E-EEec-CCCccC-CceeeCCEEEEEeCCCEEEEEECCCCC
Confidence            1  1 1111 122222 245678888888899999999988764

...

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.99  E-value=8.9e-05  Score=68.52  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=59.6

Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      .....|.+++++|+    ...|+.|+.||+|.+||......    ......=.+..++|+|+|..++.+++-|.+++||+
T Consensus       257 pL~s~v~~ca~sp~----E~kLvlGC~DgSiiLyD~~~~~t----~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~  328 (545)
T PF11768_consen  257 PLPSQVICCARSPS----EDKLVLGCEDGSIILYDTTRGVT----LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM  328 (545)
T ss_pred             ecCCcceEEecCcc----cceEEEEecCCeEEEEEcCCCee----eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence            45667999999996    78899999999999999876432    11122234678999999999999999999999997


Q ss_pred             CC
Q psy2762         298 NT  299 (318)
Q Consensus       298 ~~  299 (318)
                      ..
T Consensus       329 AL  330 (545)
T PF11768_consen  329 AL  330 (545)
T ss_pred             ec
Confidence            55

>KOG3617|consensus

Probab=97.98  E-value=1.1e-05  Score=76.93  Aligned_cols=107  Identities=18%  Similarity=0.273  Sum_probs=82.6

Q ss_pred             CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEE
Q psy2762         196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVS  275 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~  275 (318)
                      ..|.|.|| .+++++....+++-|   ++++||+|.    .-.|+++=.-|.+.+|......  ...+..+|..+|.-+.
T Consensus        39 r~GSVtIf-adtGEPqr~Vt~P~h---atSLCWHpe----~~vLa~gwe~g~~~v~~~~~~e--~htv~~th~a~i~~l~  108 (1416)
T KOG3617|consen   39 RGGSVTIF-ADTGEPQRDVTYPVH---ATSLCWHPE----EFVLAQGWEMGVSDVQKTNTTE--THTVVETHPAPIQGLD  108 (1416)
T ss_pred             CCceEEEE-ecCCCCCccccccee---hhhhccChH----HHHHhhccccceeEEEecCCce--eeeeccCCCCCceeEE
Confidence            45678888 455665555555556   567999996    6678888888999999876532  3345567889999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeeccc
Q psy2762         276 WSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGKT  312 (318)
Q Consensus       276 ~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~  312 (318)
                      |||+|..|.++..=|.|.+|..+..|+.+...-|+++
T Consensus       109 wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~he  145 (1416)
T KOG3617|consen  109 WSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHE  145 (1416)
T ss_pred             ecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhH
Confidence            9999999999999999999998887777766655543

>KOG1275|consensus

Probab=97.98  E-value=0.00034  Score=67.71  Aligned_cols=199  Identities=13%  Similarity=0.111  Sum_probs=126.2

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~  105 (318)
                      ..++-|+.-..+..+|+.+           .+..+...--.+.|+=++.    .+++|..|..-|+|.+-|+.+-+  .+
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~-----------~~e~r~~~v~a~~v~imR~----Nnr~lf~G~t~G~V~LrD~~s~~--~i  210 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNT-----------EKETRTTNVSASGVTIMRY----NNRNLFCGDTRGTVFLRDPNSFE--TI  210 (1118)
T ss_pred             cceeecchhhheeeeeccc-----------ceeeeeeeccCCceEEEEe----cCcEEEeecccceEEeecCCcCc--ee
Confidence            4455566666777777752           2333333222334666664    26889999999999999987654  44


Q ss_pred             EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762         106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      .++..|.+.|..++..    +.+|++++....  .+                                            
T Consensus       211 ht~~aHs~siSDfDv~----GNlLitCG~S~R--~~--------------------------------------------  240 (1118)
T KOG1275|consen  211 HTFDAHSGSISDFDVQ----GNLLITCGYSMR--RY--------------------------------------------  240 (1118)
T ss_pred             eeeeccccceeeeecc----CCeEEEeecccc--cc--------------------------------------------
Confidence            4677899999877765    445666554321  00                                            


Q ss_pred             CccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee--eEE
Q psy2762         186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT--PFI  263 (318)
Q Consensus       186 ~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~--~~~  263 (318)
                          -++   .|.-|+|||++......  .+.-+.++ .-+.|.|..   .+.++.+|.-|...+-|..+.....  ..+
T Consensus       241 ----~l~---~D~FvkVYDLRmmral~--PI~~~~~P-~flrf~Psl---~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~  307 (1118)
T KOG1275|consen  241 ----NLA---MDPFVKVYDLRMMRALS--PIQFPYGP-QFLRFHPSL---TTRLAVTSQSGQFQFVDTATLSNPPAGVKM  307 (1118)
T ss_pred             ----ccc---ccchhhhhhhhhhhccC--CcccccCc-hhhhhcccc---cceEEEEecccceeeccccccCCCccceeE
Confidence                011   24568999987643211  11122222 457889973   5688999999999998833321111  122


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      .......+.++.+|++|+.||-+-.+|.|.+|.-+.-.++.
T Consensus       308 v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~~~P~Fn  348 (1118)
T KOG1275|consen  308 VNPNGSGISAFDISSNGDALAFGDHEGHVNLWADRPQPQFN  348 (1118)
T ss_pred             EccCCCcceeEEecCCCceEEEecccCcEeeecCCCCCccC
Confidence            23344569999999999999999999999999854444444

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.97  E-value=0.0093  Score=55.26  Aligned_cols=192  Identities=13%  Similarity=0.002  Sum_probs=98.2

Q ss_pred             eeeeeeecCCCCE-EEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EEECC
Q psy2762          15 MIHDAEMDYLGLY-LATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SCSYD   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~-l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~s~D   89 (318)
                      ......|+|||+. ++-.+.+   ..|.++|+...         ....+.   ...+.+....|++  ||+.|+ +.+.+
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg---------~~~~lt---~~~g~~~~~~~SP--DG~~la~~~~~~  254 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG---------KKEKIA---SSQGMLVVSDVSK--DGSKLLLTMAPK  254 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC---------cEEEEe---cCCCcEEeeEECC--CCCEEEEEEccC
Confidence            5667899999985 5544444   34666676522         112232   2445556678974  476554 44445


Q ss_pred             C--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCcceeeeccccccccee
Q psy2762          90 R--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        90 g--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      +  .|-++|+.++...++.   .+........|+||+. .++.+....+  .|.+.+...+    ...++.....  ...
T Consensus       255 g~~~Iy~~dl~~g~~~~LT---~~~~~d~~p~~SPDG~-~I~F~Sdr~g~~~Iy~~dl~~g----~~~rlt~~g~--~~~  324 (419)
T PRK04043        255 GQPDIYLYDTNTKTLTQIT---NYPGIDVNGNFVEDDK-RIVFVSDRLGYPNIFMKKLNSG----SVEQVVFHGK--NNS  324 (419)
T ss_pred             CCcEEEEEECCCCcEEEcc---cCCCccCccEECCCCC-EEEEEECCCCCceEEEEECCCC----CeEeCccCCC--cCc
Confidence            4  4555677666543332   2233233457999943 2333333344  3444444222    1222221111  124


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCC---------CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---------NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---------~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      .|+|+.                 ++|+-.+..         ..|.+.|+.+++..+   +... .......|+|+    |
T Consensus       325 ~~SPDG-----------------~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~---LT~~-~~~~~p~~SPD----G  379 (419)
T PRK04043        325 SVSTYK-----------------NYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR---LTAN-GVNQFPRFSSD----G  379 (419)
T ss_pred             eECCCC-----------------CEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE---CCCC-CCcCCeEECCC----C
Confidence            789973                 444433332         257777887775432   2222 12235789996    6


Q ss_pred             cEEEEEeCC-Ce--EEEEEcCC
Q psy2762         237 CMIASCSQD-RK--VIIWTSND  255 (318)
Q Consensus       237 ~~l~s~s~D-~~--i~vw~~~~  255 (318)
                      +.|+-...+ +.  +.+.++.+
T Consensus       380 ~~I~f~~~~~~~~~L~~~~l~g  401 (419)
T PRK04043        380 GSIMFIKYLGNQSALGIIRLNY  401 (419)
T ss_pred             CEEEEEEccCCcEEEEEEecCC
Confidence            655555432 22  44445544

>KOG4441|consensus

Probab=97.96  E-value=0.002  Score=61.99  Aligned_cols=244  Identities=18%  Similarity=0.243  Sum_probs=131.9

Q ss_pred             cCCCCEEEEeeCCC------cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC------
Q psy2762          22 DYLGLYLATCSSDH------TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD------   89 (318)
Q Consensus        22 ~~~g~~l~s~s~D~------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D------   89 (318)
                      +..+.+++.||.++      ++..||....         .+..+..+.. .....+++..   .+...++||.|      
T Consensus       282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~---------~w~~~a~m~~-~r~~~~~~~~---~~~lYv~GG~~~~~~~l  348 (571)
T KOG4441|consen  282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTN---------EWSSLAPMPS-PRCRVGVAVL---NGKLYVVGGYDSGSDRL  348 (571)
T ss_pred             CCCCeEEEECCCCCCCcccceeEEecCCcC---------cEeecCCCCc-ccccccEEEE---CCEEEEEccccCCCccc
Confidence            34466777788774      5777776532         2233333332 2223334432   37889999999      


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE-----EEEEeecCCCCcceeeec-ccccccc
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI-----SFLTYMSDTNSWESRKIA-AHTIGCN  163 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i-----~i~~~~~~~~~~~~~~~~-~h~~~v~  163 (318)
                      .++-.||....+|.....+.........+.+.    +.+.|.|+.||.-     -.||+.  .+.|...... ......-
T Consensus       349 ~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~----g~iYavGG~dg~~~l~svE~YDp~--~~~W~~va~m~~~r~~~g  422 (571)
T KOG4441|consen  349 SSVERYDPRTNQWTPVAPMNTKRSDFGVAVLD----GKLYAVGGFDGEKSLNSVECYDPV--TNKWTPVAPMLTRRSGHG  422 (571)
T ss_pred             ceEEEecCCCCceeccCCccCccccceeEEEC----CEEEEEeccccccccccEEEecCC--CCcccccCCCCcceeeeE
Confidence            35777888877776654443322222222222    6789999999743     345543  2334322211 1111111


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCC------eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN------LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~------~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      .+.+.                   +...++||.++      ++..||..++.|.....+..-........+      ++.
T Consensus       423 v~~~~-------------------g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~------~~~  477 (571)
T KOG4441|consen  423 VAVLG-------------------GKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL------NGK  477 (571)
T ss_pred             EEEEC-------------------CEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE------CCE
Confidence            11111                   35567777554      567899999888766655443332222222      367


Q ss_pred             EEEEEeCCCe-----EEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCC-----eEEEEEECCCCceEEE
Q psy2762         238 MIASCSQDRK-----VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDN-----SVSLWKENTDGAWQCI  306 (318)
Q Consensus       238 ~l~s~s~D~~-----i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~-----~v~iW~~~~~~~~~~~  306 (318)
                      +.+.||.|+.     |-.||.... .|...  .....+...+...+ +++..+.|+.||     +|..||-. ...|...
T Consensus       478 iYvvGG~~~~~~~~~VE~ydp~~~-~W~~v--~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~-~d~W~~~  553 (571)
T KOG4441|consen  478 IYVVGGFDGTSALSSVERYDPETN-QWTMV--APMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPE-TDTWTEV  553 (571)
T ss_pred             EEEECCccCCCccceEEEEcCCCC-ceeEc--ccCccccccccEEEECCEEEEEecccCccccceeEEcCCC-CCceeeC
Confidence            7888887763     566776653 24332  11222222222222 577778888877     77778743 4589887


Q ss_pred             eeecccc
Q psy2762         307 TEMGKTS  313 (318)
Q Consensus       307 ~~~~~~~  313 (318)
                      .++..-+
T Consensus       554 ~~~~~~~  560 (571)
T KOG4441|consen  554 TEPESGR  560 (571)
T ss_pred             CCccccc
Confidence            7754433

>KOG2315|consensus

Probab=97.95  E-value=0.0004  Score=63.65  Aligned_cols=150  Identities=12%  Similarity=0.290  Sum_probs=92.5

Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      ++.+.+++...  +...+. ..++|.++.|+|+..+..++.|=+=..+.|+|.+-+     + ...-.+++-+++-|+|.
T Consensus       252 ~Lyll~t~g~s--~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-----~-v~df~egpRN~~~fnp~  322 (566)
T KOG2315|consen  252 TLYLLATQGES--VSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-----P-VFDFPEGPRNTAFFNPH  322 (566)
T ss_pred             eEEEEEecCce--EEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-----E-eEeCCCCCccceEECCC
Confidence            45555554222  222333 378999999999965555555555667777765211     1 11234456788889997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC---
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ---  244 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~---  244 (318)
                                       +++|+.+|-+   |.|-|||..+.++  +..+..-.  -+-+.|+|+    |.+|+|+..   
T Consensus       323 -----------------g~ii~lAGFGNL~G~mEvwDv~n~K~--i~~~~a~~--tt~~eW~Pd----Ge~flTATTaPR  377 (566)
T KOG2315|consen  323 -----------------GNIILLAGFGNLPGDMEVWDVPNRKL--IAKFKAAN--TTVFEWSPD----GEYFLTATTAPR  377 (566)
T ss_pred             -----------------CCEEEEeecCCCCCceEEEeccchhh--ccccccCC--ceEEEEcCC----CcEEEEEecccc
Confidence                             4677766655   4799999887654  34443332  345799996    888888764   


Q ss_pred             ---CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         245 ---DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       245 ---D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                         |..++||+..+..    .....+....+.+.|-|
T Consensus       378 lrvdNg~KiwhytG~~----l~~~~f~sEL~qv~W~P  410 (566)
T KOG2315|consen  378 LRVDNGIKIWHYTGSL----LHEKMFKSELLQVEWRP  410 (566)
T ss_pred             EEecCCeEEEEecCce----eehhhhhHhHhheeeee
Confidence               6779999987632    11112222466777765

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.94  E-value=0.005  Score=53.62  Aligned_cols=197  Identities=13%  Similarity=0.124  Sum_probs=107.4

Q ss_pred             eeecCCCCEEEEee-----CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-----
Q psy2762          19 AEMDYLGLYLATCS-----SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-----   88 (318)
Q Consensus        19 ~~~~~~g~~l~s~s-----~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-----   88 (318)
                      .+|++||++|++.=     ..|.|-|||...          ....+.++..|.=.--.+.+.+  +|+.|+.+-.     
T Consensus        56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~----------~~~ri~E~~s~GIGPHel~l~p--DG~tLvVANGGI~Th  123 (305)
T PF07433_consen   56 GVFSPDGRLLYTTENDYETGRGVIGVYDAAR----------GYRRIGEFPSHGIGPHELLLMP--DGETLVVANGGIETH  123 (305)
T ss_pred             EEEcCCCCEEEEeccccCCCcEEEEEEECcC----------CcEEEeEecCCCcChhhEEEcC--CCCEEEEEcCCCccC
Confidence            57999999999863     458899999973          3456777776654444566643  4666666522     


Q ss_pred             --CCe-----------EEEEeCCCCcEEEEEEe--cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          89 --DRK-----------VIIWRGDNGNWFKYYEY--NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        89 --Dg~-----------v~vWd~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                        .|.           +.+-|..+++......+  ..|...|..+++.++  +.++...-..+         +.  .   
T Consensus       124 pd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~--G~V~~a~Q~qg---------~~--~---  187 (305)
T PF07433_consen  124 PDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGD--GTVAFAMQYQG---------DP--G---  187 (305)
T ss_pred             cccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCC--CcEEEEEecCC---------CC--C---
Confidence              122           22223344443333334  224455555555554  32221111100         00  0   


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                                                      +..-.++.-..++.++........      ...-...|-+|+++++  
T Consensus       188 --------------------------------~~~PLva~~~~g~~~~~~~~p~~~------~~~l~~Y~gSIa~~~~--  227 (305)
T PF07433_consen  188 --------------------------------DAPPLVALHRRGGALRLLPAPEEQ------WRRLNGYIGSIAADRD--  227 (305)
T ss_pred             --------------------------------ccCCeEEEEcCCCcceeccCChHH------HHhhCCceEEEEEeCC--
Confidence                                            001134444444445555443221      1234456889999986  


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                       .+...+|+-.-+.+.+||..+....   .. ..-.-+..|+-.+++ +++|.+..
T Consensus       228 -g~~ia~tsPrGg~~~~~d~~tg~~~---~~-~~l~D~cGva~~~~~-f~~ssG~G  277 (305)
T PF07433_consen  228 -GRLIAVTSPRGGRVAVWDAATGRLL---GS-VPLPDACGVAPTDDG-FLVSSGQG  277 (305)
T ss_pred             -CCEEEEECCCCCEEEEEECCCCCEe---ec-cccCceeeeeecCCc-eEEeCCCc
Confidence             2345577778899999998775411   11 112346777777777 67666654

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.91  E-value=0.00011  Score=67.96  Aligned_cols=75  Identities=13%  Similarity=0.102  Sum_probs=60.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      -.+..|.+++++|+...|+.|+.||+|++||....             +..+..+.=..+.++| || +|..++.|+.-|
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~-------------~t~~~ka~~~P~~iaW-Hp-~gai~~V~s~qG  321 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG-------------VTLLAKAEFIPTLIAW-HP-DGAIFVVGSEQG  321 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC-------------eeeeeeecccceEEEE-cC-CCcEEEEEcCCc
Confidence            36778999999999999999999999999998632             2222233445778999 65 589999999999


Q ss_pred             eEEEEeCCCC
Q psy2762          91 KVIIWRGDNG  100 (318)
Q Consensus        91 ~v~vWd~~~~  100 (318)
                      .+++||+.-+
T Consensus       322 elQ~FD~ALs  331 (545)
T PF11768_consen  322 ELQCFDMALS  331 (545)
T ss_pred             eEEEEEeecC
Confidence            9999998754

>KOG1275|consensus

Probab=97.91  E-value=0.00012  Score=70.72  Aligned_cols=147  Identities=18%  Similarity=0.230  Sum_probs=100.0

Q ss_pred             cCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC---------CCeE
Q psy2762          22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY---------DRKV   92 (318)
Q Consensus        22 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~---------Dg~v   92 (318)
                      -.+++++.+|...|+|.+=|.+           .-..+.++.+|++.|.....    .|++|+|+|.         |..|
T Consensus       184 R~Nnr~lf~G~t~G~V~LrD~~-----------s~~~iht~~aHs~siSDfDv----~GNlLitCG~S~R~~~l~~D~Fv  248 (1118)
T KOG1275|consen  184 RYNNRNLFCGDTRGTVFLRDPN-----------SFETIHTFDAHSGSISDFDV----QGNLLITCGYSMRRYNLAMDPFV  248 (1118)
T ss_pred             EecCcEEEeecccceEEeecCC-----------cCceeeeeeccccceeeeec----cCCeEEEeecccccccccccchh
Confidence            4567899999999999999986           24678999999999977764    4899999987         6678


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC-cceeeecccccccceeeeCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS-WESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      +|||++.-+....  +..+.++ .-+.|+|.= ...++.++..|+.-+.|...-.+. .....+......+..+.+++. 
T Consensus       249 kVYDLRmmral~P--I~~~~~P-~flrf~Psl-~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn-  323 (1118)
T KOG1275|consen  249 KVYDLRMMRALSP--IQFPYGP-QFLRFHPSL-TTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSN-  323 (1118)
T ss_pred             hhhhhhhhhccCC--cccccCc-hhhhhcccc-cceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCC-
Confidence            9999886543222  2223333 446778853 456778888888887763211111 111122222333555556654 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK  204 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd  204 (318)
                                      ++.||.|-.+|.|.+|.
T Consensus       324 ----------------~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  324 ----------------GDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             ----------------CceEEEecccCcEeeec
Confidence                            56899999999999996

>KOG1008|consensus

Probab=97.85  E-value=7.8e-06  Score=75.81  Aligned_cols=209  Identities=17%  Similarity=0.140  Sum_probs=119.2

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec----CCeEEEE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS----DGTISFL  141 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~----d~~i~i~  141 (318)
                      ...+.|+++....+--+++.|..+|.|-+=.....-...--..++|..++++++|++-+ ...||+|-.    |..+.||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLD-tn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELD-TNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceeccccccccccccccccc-HHHHHhhhhhhcccCCccce
Confidence            45577777765444457888999999988765432111111235678899999999975 345666632    4578899


Q ss_pred             EeecCCC-Ccceeeecc-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         142 TYMSDTN-SWESRKIAA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       142 ~~~~~~~-~~~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      |....-. ..+...+.+ -..+.+.+.|-.+                 .+.+.+|...+.++++|++... .  ....-.
T Consensus       135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd-----------------~klvlaGm~sr~~~ifdlRqs~-~--~~~svn  194 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRD-----------------TKLVLAGMTSRSVHIFDLRQSL-D--SVSSVN  194 (783)
T ss_pred             ecccccCCCccccccccccccCccccccccC-----------------cchhhcccccchhhhhhhhhhh-h--hhhhhh
Confidence            8754311 111111111 1222333444322                 2467888888899999987321 1  111112


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc-CCCcc-eee--EEeeecCCcEEEEEEcCCCCE-EEEEe-CCCeEE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS-NDYVT-WTP--FIMNTFDDVVWNVSWSLTGDI-LTVSC-GDNSVS  293 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~-~~~~~-~~~--~~~~~~~~~v~~v~~spdg~~-l~s~~-~D~~v~  293 (318)
                      +..|..+...|=   .+.++++-. |+.|-+||. .+... .+.  .......+.+..++|+|..+- |++-. ..+++|
T Consensus       195 Tk~vqG~tVdp~---~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIr  270 (783)
T KOG1008|consen  195 TKYVQGITVDPF---SPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIR  270 (783)
T ss_pred             hhhcccceecCC---CCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEE
Confidence            233556666662   345777665 999999993 22110 000  111222346999999996433 33333 467999


Q ss_pred             EEEECC
Q psy2762         294 LWKENT  299 (318)
Q Consensus       294 iW~~~~  299 (318)
                      ++++..
T Consensus       271 lydi~~  276 (783)
T KOG1008|consen  271 LYDICV  276 (783)
T ss_pred             Eecccc
Confidence            999744

>KOG1912|consensus

Probab=97.84  E-value=0.0014  Score=62.65  Aligned_cols=269  Identities=11%  Similarity=0.111  Sum_probs=150.6

Q ss_pred             CCCcceeeeeeecCCC------------CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCC
Q psy2762          10 TGHEDMIHDAEMDYLG------------LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHP   77 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g------------~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~   77 (318)
                      .-|+..|+.++|.|-.            -+||++...|.|.|||..           .+..+..+..|.++|..+.|...
T Consensus        52 e~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~-----------~~s~~~~l~~~~~~~qdl~W~~~  120 (1062)
T KOG1912|consen   52 ELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFV-----------LASVINWLSHSNDSVQDLCWVPA  120 (1062)
T ss_pred             ccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEeh-----------hhhhhhhhcCCCcchhheeeeec
Confidence            4588899999987632            367788888999999985           23456678889999999999643


Q ss_pred             CC-C-cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC---CCcce
Q psy2762          78 QF-G-TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT---NSWES  152 (318)
Q Consensus        78 ~~-~-~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~---~~~~~  152 (318)
                      .+ . ..|+.-..-.++.+|+..+|.  ..++..-......|+.+.|-+.-++.+.|+ .|.+.+.+.....   ...+.
T Consensus       121 rd~Srd~LlaIh~ss~lvLwntdtG~--k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s-~g~vl~~~~l~~sep~~pgk~  197 (1062)
T KOG1912|consen  121 RDDSRDVLLAIHGSSTLVLWNTDTGE--KFWKYDYSHEILSCFRVDPFDSRHFCVLGS-KGFVLSCKDLGLSEPDVPGKE  197 (1062)
T ss_pred             cCcchheeEEecCCcEEEEEEccCCc--eeeccccCCcceeeeeeCCCCcceEEEEcc-CceEEEEeccCCCCCCCCcee
Confidence            22 3 567777778899999988886  455554445566779999876545444444 4555544432111   11111


Q ss_pred             eeec-ccccc-------c--ceeeeCCCCCC--CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762         153 RKIA-AHTIG-------C--NAVSWGPGIGS--LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       153 ~~~~-~h~~~-------v--~~~~~~p~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      .++. .|...       .  +...-.|-...  ..++.+...+... ...|++  -...+.|+|++-+.+..  ...-..
T Consensus       198 ~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~r-n~lfi~--~prellv~dle~~~~l~--vvpier  272 (1062)
T KOG1912|consen  198 FQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWR-NILFIT--FPRELLVFDLEYECCLA--VVPIER  272 (1062)
T ss_pred             EEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhh-ceEEEE--eccceEEEcchhhceeE--EEEecc
Confidence            2222 12110       0  00000000000  0000111111111 012332  34568999988665432  223344


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc---------------eeeEEeeecCCcEEEEEEcCC-CCEEE
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT---------------WTPFIMNTFDDVVWNVSWSLT-GDILT  284 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~---------------~~~~~~~~~~~~v~~v~~spd-g~~l~  284 (318)
                      ..+.-|.+-|+..  ...|...-.||.+.||-.+....               +...+....+..+....-+|. -..++
T Consensus       273 ~~akfv~vlP~~~--rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~a  350 (1062)
T KOG1912|consen  273 GGAKFVDVLPDPR--RDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALA  350 (1062)
T ss_pred             CCcceeEeccCCC--cceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhh
Confidence            5567889999864  44688889999999996544210               000011111223445566676 33444


Q ss_pred             EEeCCCeEEEEEECC
Q psy2762         285 VSCGDNSVSLWKENT  299 (318)
Q Consensus       285 s~~~D~~v~iW~~~~  299 (318)
                      .--.+|.+.+|++..
T Consensus       351 vl~s~g~~~~w~l~~  365 (1062)
T KOG1912|consen  351 VLYSSGDSTFWQLSN  365 (1062)
T ss_pred             hhhhcchhHHHhhhc
Confidence            445678888998764

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.77  E-value=0.031  Score=51.25  Aligned_cols=273  Identities=13%  Similarity=0.112  Sum_probs=135.8

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCC-cCC--C---C-C------------------C----C---CcceEEEEe
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRN-LKK--D---D-S------------------H----S---QKGTLIAEL   62 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~-~~~--~---~-~------------------~----~---~~~~~~~~~   62 (318)
                      .|+.+.|.++..-|+.|-..|.|-||..... ...  .   . +                  .    +   +.-.+...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            5888999999888999999999999976421 010  0   0 0                  0    0   011234556


Q ss_pred             cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC------CCcCeEEEEeeC---CCCC---cEEE
Q psy2762          63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN------HDSSVNSIAWAP---KEFG---LILA  130 (318)
Q Consensus        63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~------h~~~v~~v~~~p---~~~~---~~la  130 (318)
                      ....++|++++.+   +=.++|.|..+|.+.|-|++....+....+..      ....|.++.|.-   .+.+   .++.
T Consensus        83 ~~~~g~vtal~~S---~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~  159 (395)
T PF08596_consen   83 DAKQGPVTALKNS---DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL  159 (395)
T ss_dssp             ---S-SEEEEEE----BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred             eccCCcEeEEecC---CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence            6678999999975   24789999999999999998765444333333      234678888872   2212   5888


Q ss_pred             EeecCCeEEEEEeecC-CCCcceeee--c-ccccccceee-eCCCCCCCccc------cccCCCCCCccceEEEecCCCe
Q psy2762         131 CGSSDGTISFLTYMSD-TNSWESRKI--A-AHTIGCNAVS-WGPGIGSLSEL------DLKGSKLGGVAKRLVSGGCDNL  199 (318)
Q Consensus       131 sgs~d~~i~i~~~~~~-~~~~~~~~~--~-~h~~~v~~~~-~~p~~~~~~~~------~~~~~~~~~~~~~lasgs~d~~  199 (318)
                      +|+..|.+.+|.+... ...+.....  . .+..++..+. +..+.+.-...      .+.. .... ..+++.++ +..
T Consensus       160 vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~-g~~i-~g~vVvvS-e~~  236 (395)
T PF08596_consen  160 VGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSK-GISI-PGYVVVVS-ESD  236 (395)
T ss_dssp             EEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGG-T-----EEEEEE--SSE
T ss_pred             EEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhcccc-CCCc-CcEEEEEc-ccc
Confidence            9999999999987542 222222111  1 2334443333 22221110000      0000 0011 12344444 467


Q ss_pred             EEEEEccCCeEEEEEEcccCCCCeeEEEEccCC-CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee-c-CCcEEEEEE
Q psy2762         200 IKIWKQEGDKWIEETKLENHSDWVRDVAWAPSW-GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-F-DDVVWNVSW  276 (318)
Q Consensus       200 i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~-~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~-~-~~~v~~v~~  276 (318)
                      +||+..-+.+.  .++.......+..+++-+-- ...+..|++-..+|.|+++.+-.........+.. . ...+...++
T Consensus       237 irv~~~~~~k~--~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssi  314 (395)
T PF08596_consen  237 IRVFKPPKSKG--AHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSI  314 (395)
T ss_dssp             EEEE-TT---E--EEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE
T ss_pred             eEEEeCCCCcc--cceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEE
Confidence            99998765543  22222222233445553210 0136789999999999999987643211111110 0 123446678


Q ss_pred             cCCCCEEEEEeCCCeEEEEE
Q psy2762         277 SLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       277 spdg~~l~s~~~D~~v~iW~  296 (318)
                      +++|+.+.-.+. ..+.++.
T Consensus       315 s~~Gdi~~~~gp-sE~~l~s  333 (395)
T PF08596_consen  315 SRNGDIFYWTGP-SEIQLFS  333 (395)
T ss_dssp             -TTS-EEEE-SS-SEEEEEE
T ss_pred             CCCCCEEEEeCc-ccEEEEE
Confidence            899988766653 3544444

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG1920|consensus

Probab=97.62  E-value=0.013  Score=58.93  Aligned_cols=192  Identities=18%  Similarity=0.330  Sum_probs=104.3

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcC------CCcCCCCC-CC-----CcceEEEEecc----------------
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLD------RNLKKDDS-HS-----QKGTLIAELKG----------------   64 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~------~~~~~~~~-~~-----~~~~~~~~~~~----------------   64 (318)
                      ...|.++.||||+..++-...++++.+-+-+      .+...++. .+     .-|.....++|                
T Consensus       109 d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~  188 (1265)
T KOG1920|consen  109 DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKA  188 (1265)
T ss_pred             cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccccccccccccccceecccccceeeecchhhhccccccccccc
Confidence            4578999999999999888888888776531      11100000 00     00110111111                


Q ss_pred             -----cccCeEEEEecCCCCCcEEEEEEC----C-CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          65 -----HSGPVWQVAWAHPQFGTLLASCSY----D-RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        65 -----h~~~V~~v~~~~~~~~~~las~s~----D-g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                           -.+.=++|+|.  .||+++|....    + +.|+|||.+ +..-...  ..-.+--.+++|-|.  |.++|+-..
T Consensus       189 ~~~~~~~~~~~~IsWR--gDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~s--e~~~~l~~~LsWkPs--gs~iA~iq~  261 (1265)
T KOG1920|consen  189 LEQIEQDDHKTSISWR--GDGEYFAVSFVESETGTRKIRVYDRE-GALNSTS--EPVEGLQHSLSWKPS--GSLIAAIQC  261 (1265)
T ss_pred             ccchhhccCCceEEEc--cCCcEEEEEEEeccCCceeEEEeccc-chhhccc--CcccccccceeecCC--CCeEeeeee
Confidence                 01112358895  46999988432    3 899999976 3211111  111223457899997  666666533


Q ss_pred             ---CCeEEEEEeecCCCCcc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEE---ecCCCeEEEEEccC
Q psy2762         135 ---DGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS---GGCDNLIKIWKQEG  207 (318)
Q Consensus       135 ---d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las---gs~d~~i~iwd~~~  207 (318)
                         |+.|.++.. ++-.-.+ .........+|..++|+.+                 +..||+   ..+...|++|-..+
T Consensus       262 ~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~-----------------sdiLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  262 KTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSN-----------------SDILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             cCCCCcEEEEec-CCccccccccCCcccccchheeeecCC-----------------CCceeeeecccccceEEEEEecC
Confidence               446777642 1210000 0011122334888999875                 244555   55555699998887


Q ss_pred             CeEEEEEEcccCCCCeeEEEEccC
Q psy2762         208 DKWIEETKLENHSDWVRDVAWAPS  231 (318)
Q Consensus       208 ~~~~~~~~~~~h~~~V~~v~~sp~  231 (318)
                      -.|...+.+.-.....  +.|+|.
T Consensus       324 yhWYLKq~l~~~~~~~--~~W~p~  345 (1265)
T KOG1920|consen  324 YHWYLKQELQFSQKAL--LMWDPV  345 (1265)
T ss_pred             eEEEEEEEEecccccc--ccccCC
Confidence            7776555543332222  788885

>KOG1832|consensus

Probab=97.61  E-value=7.1e-05  Score=72.06  Aligned_cols=192  Identities=13%  Similarity=0.181  Sum_probs=115.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE-EE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS-CS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las-~s   87 (318)
                      ...|....+|++|+...++|+.|+..|.|++|++.+           |.......+|..+|+.+.=+  .+|..+.+ ++
T Consensus      1097 frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~s-----------G~~e~s~ncH~SavT~vePs--~dgs~~Ltsss 1163 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSS-----------GSMEESVNCHQSAVTLVEPS--VDGSTQLTSSS 1163 (1516)
T ss_pred             hhccccceeeEEeecCCceEEeeeccceEEEEEccC-----------cccccccccccccccccccc--CCcceeeeecc
Confidence            356888999999999999999999999999999973           44566788999999998633  45655444 44


Q ss_pred             CCC-eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---ccccccc
Q psy2762          88 YDR-KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AHTIGCN  163 (318)
Q Consensus        88 ~Dg-~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h~~~v~  163 (318)
                      +.. ...+|++.+. ......+.    .-.++.|+... .. -+.|..-....+||......  ....+.   +....-+
T Consensus      1164 ~S~PlsaLW~~~s~-~~~~Hsf~----ed~~vkFsn~~-q~-r~~gt~~d~a~~YDvqT~~~--l~tylt~~~~~~y~~n 1234 (1516)
T KOG1832|consen 1164 SSSPLSALWDASST-GGPRHSFD----EDKAVKFSNSL-QF-RALGTEADDALLYDVQTCSP--LQTYLTDTVTSSYSNN 1234 (1516)
T ss_pred             ccCchHHHhccccc-cCcccccc----ccceeehhhhH-HH-HHhcccccceEEEecccCcH--HHHhcCcchhhhhhcc
Confidence            444 6789987642 11111221    24578888652 22 22333334566888744331  111111   1222235


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      ...|+|..                 ..+.   +||.  +||.+..+  ..+.|...+..+.. .|+|.    |..++.-+
T Consensus      1235 ~a~FsP~D-----------------~LIl---ndGv--LWDvR~~~--aIh~FD~ft~~~~G-~FHP~----g~eVIINS 1285 (1516)
T KOG1832|consen 1235 LAHFSPCD-----------------TLIL---NDGV--LWDVRIPE--AIHRFDQFTDYGGG-GFHPS----GNEVIINS 1285 (1516)
T ss_pred             ccccCCCc-----------------ceEe---eCce--eeeeccHH--HHhhhhhheecccc-cccCC----CceEEeec
Confidence            66777752                 2222   4553  58877542  34444444433333 58885    66666554


Q ss_pred             CCCeEEEEEcCCC
Q psy2762         244 QDRKVIIWTSNDY  256 (318)
Q Consensus       244 ~D~~i~vw~~~~~  256 (318)
                           -|||..+.
T Consensus      1286 -----EIwD~RTF 1293 (1516)
T KOG1832|consen 1286 -----EIWDMRTF 1293 (1516)
T ss_pred             -----hhhhhHHH
Confidence                 57887653

>smart00320 WD40 WD40 repeats

Probab=97.58  E-value=0.00027  Score=40.12  Aligned_cols=38  Identities=45%  Similarity=0.732  Sum_probs=32.4

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      ..+..+..|...|+++.|.+  .+.++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSP--DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECC--CCCEEEEecCCCeEEEcC
Confidence            45677788999999999964  368999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PHA02713 hypothetical protein; Provisional

Probab=97.56  E-value=0.012  Score=56.70  Aligned_cols=102  Identities=11%  Similarity=0.212  Sum_probs=58.0

Q ss_pred             eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC------CeEEEEEcCCCcceeeEEeeecC-CcE
Q psy2762         199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD------RKVIIWTSNDYVTWTPFIMNTFD-DVV  271 (318)
Q Consensus       199 ~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D------~~i~vw~~~~~~~~~~~~~~~~~-~~v  271 (318)
                      .+..||..+++|.....+.........+.+      ++...+.||.+      ..+..||......|......... ...
T Consensus       433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~~~------~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~  506 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFWTGTIRPGVVSH------KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSAL  506 (557)
T ss_pred             eEEEECCCCCeEeecCCCCcccccCcEEEE------CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccc
Confidence            577899888888655444322221112222      35666777654      24677888762246432111111 112


Q ss_pred             EEEEEcCCCCEEEEEeCCC--eEEEEEECCCCceEEEeee
Q psy2762         272 WNVSWSLTGDILTVSCGDN--SVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~--~v~iW~~~~~~~~~~~~~~  309 (318)
                      ..+.+  +|+..+.||.|+  ++..+|..+ .+|..+.+-
T Consensus       507 ~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~-~~W~~~~~~  543 (557)
T PHA02713        507 HTILH--DNTIMMLHCYESYMLQDTFNVYT-YEWNHICHQ  543 (557)
T ss_pred             eeEEE--CCEEEEEeeecceeehhhcCccc-ccccchhhh
Confidence            22222  788999999888  788888555 589877663

>smart00320 WD40 WD40 repeats

Probab=97.53  E-value=0.00016  Score=41.17  Aligned_cols=34  Identities=29%  Similarity=0.470  Sum_probs=30.8

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFN   41 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd   41 (318)
                      ...+|...|.++.|++++.++++++.|+.+++|+
T Consensus         7 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        7 TLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3457999999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG1008|consensus

Probab=97.49  E-value=4.1e-05  Score=71.19  Aligned_cols=159  Identities=19%  Similarity=0.285  Sum_probs=106.9

Q ss_pred             cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      ..+.|++++.+....+++.|..+|.|.+..++..... ......+|..+|++++|++-.                ...||
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS-s~E~tp~~ar~Ct~lAwneLD----------------tn~LA  119 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS-SAEVTPGYARPCTSLAWNELD----------------TNHLA  119 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccc-cceeccccccccccccccccc----------------HHHHH
Confidence            4577888887655578999999999999876554322 112334778899999998742                23455


Q ss_pred             Ee----cCCCeEEEEEccCC--eEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee
Q psy2762         193 SG----GCDNLIKIWKQEGD--KWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN  265 (318)
Q Consensus       193 sg----s~d~~i~iwd~~~~--~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~  265 (318)
                      .|    -.|-.+.|||..++  .+.....|.+ -.....++||-.    +...+.+|...+.+.++|+.....   ....
T Consensus       120 agldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlr----d~klvlaGm~sr~~~ifdlRqs~~---~~~s  192 (783)
T KOG1008|consen  120 AGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLR----DTKLVLAGMTSRSVHIFDLRQSLD---SVSS  192 (783)
T ss_pred             hhhhhhcccCCccceecccccCCCccccccccccccCcccccccc----Ccchhhcccccchhhhhhhhhhhh---hhhh
Confidence            54    34557999997765  2223333333 334466888885    367888888889999999863221   1111


Q ss_pred             ecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEE
Q psy2762         266 TFDDVVWNVSWSL-TGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       266 ~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~  296 (318)
                      .-++.|..+..+| .+.++++-. |+.+.|||
T Consensus       193 vnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD  223 (783)
T KOG1008|consen  193 VNTKYVQGITVDPFSPNYFCSNS-DGDIAIWD  223 (783)
T ss_pred             hhhhhcccceecCCCCCceeccc-cCceeecc
Confidence            1234677888899 788987666 89999999

>KOG1832|consensus

Probab=97.42  E-value=7.8e-05  Score=71.78  Aligned_cols=205  Identities=14%  Similarity=0.128  Sum_probs=121.2

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-e
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-T  137 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-~  137 (318)
                      .++++.|+..-+|++|+.  ..++|+.|+.-|.|+++++.++.-  ......|.++|+-|.=+.+.. ..+.+.+... .
T Consensus      1094 w~~frd~~~~fTc~afs~--~~~hL~vG~~~Geik~~nv~sG~~--e~s~ncH~SavT~vePs~dgs-~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSG--GTNHLAVGSHAGEIKIFNVSSGSM--EESVNCHQSAVTLVEPSVDGS-TQLTSSSSSSPL 1168 (1516)
T ss_pred             chhhhccccceeeEEeec--CCceEEeeeccceEEEEEccCccc--cccccccccccccccccCCcc-eeeeeccccCch
Confidence            567888999999999985  478999999999999999988752  223567899998887665532 2333333332 3


Q ss_pred             EEEEEeecCCCCcceeeeccccc-ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE-E-
Q psy2762         138 ISFLTYMSDTNSWESRKIAAHTI-GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE-T-  214 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~-~-  214 (318)
                      ..+|+...-       .-..|.. ...++.|+..                 .+.-+.|..-....|||.+++...+. . 
T Consensus      1169 saLW~~~s~-------~~~~Hsf~ed~~vkFsn~-----------------~q~r~~gt~~d~a~~YDvqT~~~l~tylt 1224 (1516)
T KOG1832|consen 1169 SALWDASST-------GGPRHSFDEDKAVKFSNS-----------------LQFRALGTEADDALLYDVQTCSPLQTYLT 1224 (1516)
T ss_pred             HHHhccccc-------cCccccccccceeehhhh-----------------HHHHHhcccccceEEEecccCcHHHHhcC
Confidence            346654210       0012332 3455666543                 12223444445688999998753221 0 


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ..-+.+..=++..|||+    ..++.   .||  -+||+....  .+..+..+.. -..-.|+|.|..++.-++     |
T Consensus      1225 ~~~~~~y~~n~a~FsP~----D~LIl---ndG--vLWDvR~~~--aIh~FD~ft~-~~~G~FHP~g~eVIINSE-----I 1287 (1516)
T KOG1832|consen 1225 DTVTSSYSNNLAHFSPC----DTLIL---NDG--VLWDVRIPE--AIHRFDQFTD-YGGGGFHPSGNEVIINSE-----I 1287 (1516)
T ss_pred             cchhhhhhccccccCCC----cceEe---eCc--eeeeeccHH--HHhhhhhhee-cccccccCCCceEEeech-----h
Confidence            01122223367789986    33332   556  478887542  1111112222 224579999999887664     8


Q ss_pred             EEECCCCceEEEeee
Q psy2762         295 WKENTDGAWQCITEM  309 (318)
Q Consensus       295 W~~~~~~~~~~~~~~  309 (318)
                      ||+++......+-+|
T Consensus      1288 wD~RTF~lLh~VP~L 1302 (1516)
T KOG1832|consen 1288 WDMRTFKLLHSVPSL 1302 (1516)
T ss_pred             hhhHHHHHHhcCccc
Confidence            998876555544443

>KOG3621|consensus

Probab=97.40  E-value=0.0029  Score=59.84  Aligned_cols=196  Identities=11%  Similarity=0.162  Sum_probs=116.0

Q ss_pred             CCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee---
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI---  155 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~---  155 (318)
                      .+++++-|+.-|.+.+++...+. ...++..+..+.+..+.++++  ..++|+|+..|.|.++...... ......+   
T Consensus        44 t~~~l~~GsS~G~lyl~~R~~~~-~~~~~~~~~~~~~~~~~vs~~--e~lvAagt~~g~V~v~ql~~~~-p~~~~~~t~~  119 (726)
T KOG3621|consen   44 TEEYLAMGSSAGSVYLYNRHTGE-MRKLKNEGATGITCVRSVSSV--EYLVAAGTASGRVSVFQLNKEL-PRDLDYVTPC  119 (726)
T ss_pred             CCceEEEecccceEEEEecCchh-hhcccccCccceEEEEEecch--hHhhhhhcCCceEEeehhhccC-CCcceeeccc
Confidence            47899999999999999876553 233344445566677788887  5789999999999988654321 1122222   


Q ss_pred             -cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCC
Q psy2762         156 -AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSW  232 (318)
Q Consensus       156 -~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~  232 (318)
                       +.|...|+++.|+++                 +..+.+|..-|+|..-.++....  ...+.+-.-.+.|-.|++..  
T Consensus       120 d~~~~~rVTal~Ws~~-----------------~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q--  180 (726)
T KOG3621|consen  120 DKSHKCRVTALEWSKN-----------------GMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ--  180 (726)
T ss_pred             cccCCceEEEEEeccc-----------------ccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc--
Confidence             236778999999997                 46799999999998876665210  11122223345577777764  


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC----CCEEEEEeCCCeEEEEEECCCCce
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT----GDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd----g~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                         +.+|++.. -+ ..+.+.+....+++...+.-.-.-....|-|-    .+....+++-| .|+|..+..|..
T Consensus       181 ---~~LLVStl-~r-~~Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG-~RlWead~~G~V  249 (726)
T KOG3621|consen  181 ---SYLLVSTL-TR-CILCQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG-LRLWEADFAGEV  249 (726)
T ss_pred             ---ceehHhhh-hh-hheeecchhHHHHhcCCCcCCccccceEEeeccccCCCceEEEecCC-CceEEeecceeE
Confidence               34444443 23 23444433222222111110101123344443    23344455654 699999887764

>KOG1645|consensus

Probab=97.39  E-value=0.0083  Score=53.31  Aligned_cols=84  Identities=17%  Similarity=0.192  Sum_probs=66.9

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      +.-+.+|...|..++|++ ....+|..++.+.+|+|.|+++...+..+  ..| ..+.+++|.-++ ..++.+|...|.|
T Consensus       186 sq~lp~~g~~IrdlafSp-~~~GLl~~asl~nkiki~dlet~~~vssy--~a~-~~~wSC~wDlde-~h~IYaGl~nG~V  260 (463)
T KOG1645|consen  186 SQILPGEGSFIRDLAFSP-FNEGLLGLASLGNKIKIMDLETSCVVSSY--IAY-NQIWSCCWDLDE-RHVIYAGLQNGMV  260 (463)
T ss_pred             hhcccccchhhhhhccCc-cccceeeeeccCceEEEEecccceeeehe--ecc-CCceeeeeccCC-cceeEEeccCceE
Confidence            334567888899999975 44558899999999999999987544443  334 789999999987 5688899999999


Q ss_pred             EEEEeecCC
Q psy2762         139 SFLTYMSDT  147 (318)
Q Consensus       139 ~i~~~~~~~  147 (318)
                      .|+|.+...
T Consensus       261 lvyD~R~~~  269 (463)
T KOG1645|consen  261 LVYDMRQPE  269 (463)
T ss_pred             EEEEccCCC
Confidence            999987654

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.34  E-value=0.08  Score=45.24  Aligned_cols=207  Identities=14%  Similarity=0.176  Sum_probs=108.9

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                      ..+.+-...+.+++|.+ ..+.++|.....+.|...+.+ ++......+.+. +-...|++.-+  +.++++--.++.+.
T Consensus        15 ~~l~g~~~e~SGLTy~p-d~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~-~D~EgI~y~g~--~~~vl~~Er~~~L~   89 (248)
T PF06977_consen   15 KPLPGILDELSGLTYNP-DTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGF-GDYEGITYLGN--GRYVLSEERDQRLY   89 (248)
T ss_dssp             EE-TT--S-EEEEEEET-TTTEEEEEETTTTEEEEEETT---EEEEEE-SS--SSEEEEEE-ST--TEEEEEETTTTEEE
T ss_pred             eECCCccCCccccEEcC-CCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCC-CCceeEEEECC--CEEEEEEcCCCcEE
Confidence            35566667799999974 357788888888888877764 566666666653 45677888765  56666655688888


Q ss_pred             EEEeecCCCCcce---eeec-----ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---C
Q psy2762         140 FLTYMSDTNSWES---RKIA-----AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---D  208 (318)
Q Consensus       140 i~~~~~~~~~~~~---~~~~-----~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---~  208 (318)
                      +.++.........   ..+.     .+..+...++|.|..                 +.|..+-+....+|+....   .
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~-----------------~~L~v~kE~~P~~l~~~~~~~~~  152 (248)
T PF06977_consen   90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKT-----------------NRLFVAKERKPKRLYEVNGFPGG  152 (248)
T ss_dssp             EEEE----TT--EEEEEEEE---S---SS--EEEEEETTT-----------------TEEEEEEESSSEEEEEEESTT-S
T ss_pred             EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCC-----------------CEEEEEeCCCChhhEEEccccCc
Confidence            8777433221111   1111     133456788888852                 3455556666677776543   1


Q ss_pred             eEEEEEE------cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec------CCcEEEEEE
Q psy2762         209 KWIEETK------LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF------DDVVWNVSW  276 (318)
Q Consensus       209 ~~~~~~~------~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~------~~~v~~v~~  276 (318)
                      .......      .......+.++.++|.   .+.+++.....+.|...|.+........+..+.      -..--.|+|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~d~S~l~~~p~---t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~  229 (248)
T PF06977_consen  153 FDLFVSDDQDLDDDKLFVRDLSGLSYDPR---TGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAF  229 (248)
T ss_dssp             S--EEEE-HHHH-HT--SS---EEEEETT---TTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE
T ss_pred             cceeeccccccccccceeccccceEEcCC---CCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEE
Confidence            1111111      1223445789999997   578888888999999998665321111111111      024668999


Q ss_pred             cCCCCEEEEEeCCCeE
Q psy2762         277 SLTGDILTVSCGDNSV  292 (318)
Q Consensus       277 spdg~~l~s~~~D~~v  292 (318)
                      .|+|++.+ +++-+-.
T Consensus       230 d~~G~LYI-vsEpNlf  244 (248)
T PF06977_consen  230 DPDGNLYI-VSEPNLF  244 (248)
T ss_dssp             -TT--EEE-EETTTEE
T ss_pred             CCCCCEEE-EcCCceE
Confidence            99997665 5565543

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.25  E-value=0.024  Score=41.55  Aligned_cols=102  Identities=21%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             eeeeee---cCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          16 IHDAEM---DYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        16 v~~~~~---~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      |+++++   +.+| +.|+.||.|..||||+-+             ..+..+.. .+.|.++.-..   +..|+.+-..|+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-------------e~~~Ei~e-~~~v~~L~~~~---~~~F~Y~l~NGT   64 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-------------EIVAEITE-TDKVTSLCSLG---GGRFAYALANGT   64 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-------------cEEEEEec-ccceEEEEEcC---CCEEEEEecCCE
Confidence            566554   3343 578889999999999743             35555554 45666776432   578999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC-C-CcEEEEeecCCeEE
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE-F-GLILACGSSDGTIS  139 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~-~~~lasgs~d~~i~  139 (318)
                      |-+|+-..    ..+..+. +..+.++.+..-. . ..-|++|-.+|.|-
T Consensus        65 VGvY~~~~----RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   65 VGVYDRSQ----RLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             EEEEeCcc----eeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            99997543    3444432 2336666655421 0 13577888777663

>KOG2114|consensus

Probab=97.22  E-value=0.065  Score=52.24  Aligned_cols=199  Identities=9%  Similarity=0.055  Sum_probs=113.9

Q ss_pred             CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcC-eEEEEeeCCCCCcEEEEeecCC-----eEEEE
Q psy2762          68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS-VNSIAWAPKEFGLILACGSSDG-----TISFL  141 (318)
Q Consensus        68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~~~lasgs~d~-----~i~i~  141 (318)
                      .|.++.  +  .+..++-|+.||.|-+.+-.   .+....+..+... |..+-...+  ..++++.+.|+     .++||
T Consensus        27 ~isc~~--s--~~~~vvigt~~G~V~~Ln~s---~~~~~~fqa~~~siv~~L~~~~~--~~~L~sv~Ed~~~np~llkiw   97 (933)
T KOG2114|consen   27 AISCCS--S--STGSVVIGTADGRVVILNSS---FQLIRGFQAYEQSIVQFLYILNK--QNFLFSVGEDEQGNPVLLKIW   97 (933)
T ss_pred             ceeEEc--C--CCceEEEeeccccEEEeccc---ceeeehheecchhhhhHhhcccC--ceEEEEEeecCCCCceEEEEe
Confidence            566664  2  37889999999998887532   2232445555555 443433322  23455555544     58899


Q ss_pred             EeecCCCCc--cee---eecccc-----cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc---CC
Q psy2762         142 TYMSDTNSW--ESR---KIAAHT-----IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE---GD  208 (318)
Q Consensus       142 ~~~~~~~~~--~~~---~~~~h~-----~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~---~~  208 (318)
                      ++....++.  ...   .+.+|.     .|...++.+-+                 .+.+|+|-.||.|..+.-+   .+
T Consensus        98 ~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~-----------------l~~Iv~Gf~nG~V~~~~GDi~RDr  160 (933)
T KOG2114|consen   98 DLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED-----------------LKTIVCGFTNGLVICYKGDILRDR  160 (933)
T ss_pred             cccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEcc-----------------ccEEEEEecCcEEEEEcCcchhcc
Confidence            986543222  111   222322     23334444432                 3679999999999988522   11


Q ss_pred             eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       209 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      . ....-.-.-.++|+.+.+..+    +..+.-+..-..|.+|.+.+.. .....+..+...++..+|++....+.+++ 
T Consensus       161 g-sr~~~~~~~~~pITgL~~~~d----~~s~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~-  233 (933)
T KOG2114|consen  161 G-SRQDYSHRGKEPITGLALRSD----GKSVLFVATTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQFICAG-  233 (933)
T ss_pred             c-cceeeeccCCCCceeeEEecC----CceeEEEEecceeEEEEecCCC-cceeeeccCCccceeeecCCCCccEEEec-
Confidence            1 111111234578999999886    4432333445779999987532 11223445556788999997766566555 


Q ss_pred             CCeEEEEEECC
Q psy2762         289 DNSVSLWKENT  299 (318)
Q Consensus       289 D~~v~iW~~~~  299 (318)
                      +.-|.+++...
T Consensus       234 ~e~l~fY~sd~  244 (933)
T KOG2114|consen  234 SEFLYFYDSDG  244 (933)
T ss_pred             CceEEEEcCCC
Confidence            44688887543

>PHA02713 hypothetical protein; Provisional

Probab=97.21  E-value=0.023  Score=54.78  Aligned_cols=61  Identities=8%  Similarity=0.047  Sum_probs=40.1

Q ss_pred             ceEEEecCC------CeEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--eEEEEEcCC
Q psy2762         189 KRLVSGGCD------NLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--KVIIWTSND  255 (318)
Q Consensus       189 ~~lasgs~d------~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--~i~vw~~~~  255 (318)
                      +..+.||.+      ..+..||..+ ++|.....++........+..      +++..+.||.|+  .+-.||..+
T Consensus       465 ~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~------~~~iyv~Gg~~~~~~~e~yd~~~  534 (557)
T PHA02713        465 DIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH------DNTIMMLHCYESYMLQDTFNVYT  534 (557)
T ss_pred             EEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE------CCEEEEEeeecceeehhhcCccc
Confidence            445556654      2467899988 688766666555444444444      378889999888  566676655

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=97.20  E-value=0.16  Score=45.77  Aligned_cols=95  Identities=15%  Similarity=0.055  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC----------CCeEEEEeCCCCcEEE
Q psy2762          35 HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY----------DRKVIIWRGDNGNWFK  104 (318)
Q Consensus        35 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~----------Dg~v~vWd~~~~~~~~  104 (318)
                      ++|.|.|.+           +++++.++..-..+-. + +++  +++.|+.+..          +..|.+||..+.+.+.
T Consensus        27 ~~v~ViD~~-----------~~~v~g~i~~G~~P~~-~-~sp--Dg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~   91 (352)
T TIGR02658        27 TQVYTIDGE-----------AGRVLGMTDGGFLPNP-V-VAS--DGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIA   91 (352)
T ss_pred             ceEEEEECC-----------CCEEEEEEEccCCCce-e-ECC--CCCEEEEEeccccccccCCCCCEEEEEECccCcEEe
Confidence            899999986           3566777664333332 3 554  4776766655          7899999999877544


Q ss_pred             EEEecCC-----CcCeEEEEeeCCCCCcEEEEee-c-CCeEEEEEeecC
Q psy2762         105 YYEYNNH-----DSSVNSIAWAPKEFGLILACGS-S-DGTISFLTYMSD  146 (318)
Q Consensus       105 ~~~~~~h-----~~~v~~v~~~p~~~~~~lasgs-~-d~~i~i~~~~~~  146 (318)
                      ...+..-     ......++++|+  ++++.... . +..|.+.|...+
T Consensus        92 ~i~~p~~p~~~~~~~~~~~~ls~d--gk~l~V~n~~p~~~V~VvD~~~~  138 (352)
T TIGR02658        92 DIELPEGPRFLVGTYPWMTSLTPD--NKTLLFYQFSPSPAVGVVDLEGK  138 (352)
T ss_pred             EEccCCCchhhccCccceEEECCC--CCEEEEecCCCCCEEEEEECCCC
Confidence            4333211     123347899999  55555444 3 688899887544

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.04  E-value=0.17  Score=43.16  Aligned_cols=195  Identities=12%  Similarity=0.161  Sum_probs=109.5

Q ss_pred             EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEee-CCCCCcEEEEeecCCeEEEEEeecCCCC
Q psy2762          71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA-PKEFGLILACGSSDGTISFLTYMSDTNS  149 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~~lasgs~d~~i~i~~~~~~~~~  149 (318)
                      +..|.+ .++.++++--..+.|..|+..++.. ....+.   . ...+++. ++  +.++++ ..++ +.++|+..+.  
T Consensus         4 gp~~d~-~~g~l~~~D~~~~~i~~~~~~~~~~-~~~~~~---~-~~G~~~~~~~--g~l~v~-~~~~-~~~~d~~~g~--   71 (246)
T PF08450_consen    4 GPVWDP-RDGRLYWVDIPGGRIYRVDPDTGEV-EVIDLP---G-PNGMAFDRPD--GRLYVA-DSGG-IAVVDPDTGK--   71 (246)
T ss_dssp             EEEEET-TTTEEEEEETTTTEEEEEETTTTEE-EEEESS---S-EEEEEEECTT--SEEEEE-ETTC-EEEEETTTTE--
T ss_pred             ceEEEC-CCCEEEEEEcCCCEEEEEECCCCeE-EEEecC---C-CceEEEEccC--CEEEEE-EcCc-eEEEecCCCc--
Confidence            456753 3577888877789999999887642 333322   2 6777777 55  555554 4444 4455653321  


Q ss_pred             cc-eeeec--c-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC--------CeEEEEEccCCeEEEEEEcc
Q psy2762         150 WE-SRKIA--A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD--------NLIKIWKQEGDKWIEETKLE  217 (318)
Q Consensus       150 ~~-~~~~~--~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d--------~~i~iwd~~~~~~~~~~~~~  217 (318)
                      .+ .....  . .....+.+++.|+                 +...++-...        +.|..++.. ++.....   
T Consensus        72 ~~~~~~~~~~~~~~~~~ND~~vd~~-----------------G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~---  130 (246)
T PF08450_consen   72 VTVLADLPDGGVPFNRPNDVAVDPD-----------------GNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA---  130 (246)
T ss_dssp             EEEEEEEETTCSCTEEEEEEEE-TT-----------------S-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE---
T ss_pred             EEEEeeccCCCcccCCCceEEEcCC-----------------CCEEEEecCCCccccccccceEEECCC-CeEEEEe---
Confidence            11 11111  1 2234677888886                 2333333222        446666665 3322221   


Q ss_pred             cCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc-ee-eEEeeecC---CcEEEEEEcCCCCEEEEEeCCCe
Q psy2762         218 NHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT-WT-PFIMNTFD---DVVWNVSWSLTGDILTVSCGDNS  291 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~-~~-~~~~~~~~---~~v~~v~~spdg~~l~s~~~D~~  291 (318)
                      ..-...+.|+|+|+    +. ++++-+..+.|..+++..... .. ........   ...-.+++.++|++.++.-..+.
T Consensus       131 ~~~~~pNGi~~s~d----g~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~  206 (246)
T PF08450_consen  131 DGLGFPNGIAFSPD----GKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGR  206 (246)
T ss_dssp             EEESSEEEEEEETT----SSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTE
T ss_pred             cCcccccceEECCc----chheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCE
Confidence            12334689999997    54 556777788888888754321 11 11121222   24778999999998887777788


Q ss_pred             EEEEEECCCCceE
Q psy2762         292 VSLWKENTDGAWQ  304 (318)
Q Consensus       292 v~iW~~~~~~~~~  304 (318)
                      |.+++.+  |+..
T Consensus       207 I~~~~p~--G~~~  217 (246)
T PF08450_consen  207 IVVFDPD--GKLL  217 (246)
T ss_dssp             EEEEETT--SCEE
T ss_pred             EEEECCC--ccEE
Confidence            8888743  5543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.03  E-value=0.02  Score=42.00  Aligned_cols=68  Identities=13%  Similarity=0.077  Sum_probs=46.2

Q ss_pred             eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      |+++++.+-.+.....|+.||+|..||+|+-+...     ......+.|.++.-... ..++.+..+|+|-+++
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~~-----~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~   69 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEIV-----AEITETDKVTSLCSLGG-GRFAYALANGTVGVYD   69 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcEE-----EEEecccceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence            56677665222234679999999999999765421     12234567778887766 4677788888887765

>KOG3621|consensus

Probab=97.03  E-value=0.0031  Score=59.68  Aligned_cols=107  Identities=13%  Similarity=0.133  Sum_probs=79.2

Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE----
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI----  263 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~----  263 (318)
                      +.+++.|+.-|.+++|+...++. ...+.++-...+..++.|+.    ..++|.|+..+.|-++-+..........    
T Consensus        45 ~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~~~~~~~~~vs~~----e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~  119 (726)
T KOG3621|consen   45 EEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGATGITCVRSVSSV----EYLVAAGTASGRVSVFQLNKELPRDLDYVTPC  119 (726)
T ss_pred             CceEEEecccceEEEEecCchhh-hcccccCccceEEEEEecch----hHhhhhhcCCceEEeehhhccCCCcceeeccc
Confidence            57999999999999999776542 34444444444566677774    7788889999999999877643211111    


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      -..|...|..+.|++|+..|.+|-.-|.|-+-.++.
T Consensus       120 d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  120 DKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             cccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            123566899999999999999999999998877666

>KOG4640|consensus

Probab=96.97  E-value=0.0046  Score=57.90  Aligned_cols=93  Identities=13%  Similarity=0.293  Sum_probs=69.1

Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCee-EEEEccCCCCCccE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVR-DVAWAPSWGLSKCM  238 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~~~  238 (318)
                      ..+..+.|+|..                 ..||++.++|.|-+.++.   +.+..+++-|...++ +++|.|+    |+.
T Consensus        21 ~~i~~~ewnP~~-----------------dLiA~~t~~gelli~R~n---~qRlwtip~p~~~v~~sL~W~~D----Gkl   76 (665)
T KOG4640|consen   21 INIKRIEWNPKM-----------------DLIATRTEKGELLIHRLN---WQRLWTIPIPGENVTASLCWRPD----GKL   76 (665)
T ss_pred             cceEEEEEcCcc-----------------chhheeccCCcEEEEEec---cceeEeccCCCCccceeeeecCC----CCE
Confidence            456778899963                 479999999999888765   345667776777787 9999996    899


Q ss_pred             EEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc
Q psy2762         239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS  277 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s  277 (318)
                      ||.|-.||+|++-|++.+...... .......|..+.|+
T Consensus        77 laVg~kdG~I~L~Dve~~~~l~~~-~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   77 LAVGFKDGTIRLHDVEKGGRLVSF-LFSVETDISKGIWD  114 (665)
T ss_pred             EEEEecCCeEEEEEccCCCceecc-ccccccchheeecc
Confidence            999999999999999886532211 12234456666665

>KOG3617|consensus

Probab=96.84  E-value=0.018  Score=55.89  Aligned_cols=107  Identities=16%  Similarity=0.363  Sum_probs=73.9

Q ss_pred             EEeeCCCCCcEEEEeec----CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEE
Q psy2762         118 IAWAPKEFGLILACGSS----DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS  193 (318)
Q Consensus       118 v~~~p~~~~~~lasgs~----d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las  193 (318)
                      .+|+|.+  .++|.++.    .|.|.|+-- .+.    +..-...+..+.++.|+|..                 -.|+.
T Consensus        21 ~SWHPse--PlfAVA~fS~er~GSVtIfad-tGE----Pqr~Vt~P~hatSLCWHpe~-----------------~vLa~   76 (1416)
T KOG3617|consen   21 SSWHPSE--PLFAVASFSPERGGSVTIFAD-TGE----PQRDVTYPVHATSLCWHPEE-----------------FVLAQ   76 (1416)
T ss_pred             cccCCCC--ceeEEEEecCCCCceEEEEec-CCC----CCcccccceehhhhccChHH-----------------HHHhh
Confidence            4677763  35555543    466766521 121    11111223345679999962                 36888


Q ss_pred             ecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcC
Q psy2762         194 GGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       194 gs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                      |=+-|.+.+|...+.+  .......|..+|..+.|||+    |..++|+..=|.+.+|...
T Consensus        77 gwe~g~~~v~~~~~~e--~htv~~th~a~i~~l~wS~~----G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   77 GWEMGVSDVQKTNTTE--THTVVETHPAPIQGLDWSHD----GTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             ccccceeEEEecCCce--eeeeccCCCCCceeEEecCC----CCeEEEcCCCceeEEEEee
Confidence            8888999999877654  23445679999999999996    8899999999999999765

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.83  E-value=0.43  Score=44.54  Aligned_cols=219  Identities=17%  Similarity=0.206  Sum_probs=108.6

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .-....+.++|+|+.++.|+ ||.-.|+....           .....     .+.-....|..   .+.+|.-....+|
T Consensus        32 ~~~p~~ls~npngr~v~V~g-~geY~iyt~~~-----------~r~k~-----~G~g~~~vw~~---~n~yAv~~~~~~I   91 (443)
T PF04053_consen   32 EIYPQSLSHNPNGRFVLVCG-DGEYEIYTALA-----------WRNKA-----FGSGLSFVWSS---RNRYAVLESSSTI   91 (443)
T ss_dssp             SS--SEEEE-TTSSEEEEEE-TTEEEEEETTT-----------TEEEE-----EEE-SEEEE-T---SSEEEEE-TTS-E
T ss_pred             CcCCeeEEECCCCCEEEEEc-CCEEEEEEccC-----------Ccccc-----cCceeEEEEec---CccEEEEECCCeE
Confidence            33577899999999998866 78888887431           11111     23344577863   3457777778999


Q ss_pred             EEE-eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          93 IIW-RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        93 ~vW-d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      +|+ ++.... ....+++   ..+..|-  +   |.+|...+ ++.|.+||.....   .+..+.  -.+|..+.|+++ 
T Consensus        92 ~I~kn~~~~~-~k~i~~~---~~~~~If--~---G~LL~~~~-~~~i~~yDw~~~~---~i~~i~--v~~vk~V~Ws~~-  155 (443)
T PF04053_consen   92 KIYKNFKNEV-VKSIKLP---FSVEKIF--G---GNLLGVKS-SDFICFYDWETGK---LIRRID--VSAVKYVIWSDD-  155 (443)
T ss_dssp             EEEETTEE-T-T-----S---S-EEEEE------SSSEEEEE-TTEEEEE-TTT-----EEEEES--S-E-EEEEE-TT-
T ss_pred             EEEEcCcccc-ceEEcCC---cccceEE--c---CcEEEEEC-CCCEEEEEhhHcc---eeeEEe--cCCCcEEEEECC-
Confidence            996 343221 0111221   2233332  2   34555544 4479999874332   122222  224789999987 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCC------------eEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------------KWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                                      +.++|..+.+ .+.|++....            .+....+   -...|.+.+|.-     ..++
T Consensus       156 ----------------g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E---~~~~IkSg~W~~-----d~fi  210 (443)
T PF04053_consen  156 ----------------GELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHE---ISERIKSGCWVE-----DCFI  210 (443)
T ss_dssp             ----------------SSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEE---E-S--SEEEEET-----TEEE
T ss_pred             ----------------CCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEE---ecceeEEEEEEc-----CEEE
Confidence                            3567766655 6777765432            2222222   145588888864     2444


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      .|...  .++-+- .+    ....+...+.++.=+.+.|..+.|...-.|+.+..+.++.
T Consensus       211 YtT~~--~lkYl~-~G----e~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld~  263 (443)
T PF04053_consen  211 YTTSN--HLKYLV-NG----ETGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYELDL  263 (443)
T ss_dssp             EE-TT--EEEEEE-TT----EEEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE--H
T ss_pred             EEcCC--eEEEEE-cC----CcceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEEECH
Confidence            44433  666642 11    1234555677888888998777888788888888776543

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.80  E-value=0.35  Score=43.12  Aligned_cols=180  Identities=12%  Similarity=0.128  Sum_probs=102.0

Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEE---eeCCC--CCcEEEEeec----------CCeEEEEEeecC-CCCcceee
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIA---WAPKE--FGLILACGSS----------DGTISFLTYMSD-TNSWESRK  154 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~---~~p~~--~~~~lasgs~----------d~~i~i~~~~~~-~~~~~~~~  154 (318)
                      .|++.|..+-..+..+.++. ...+.++.   +..+.  ...+++.|+.          .|.|.++++... ....++..
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~-~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEP-NEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEET-TEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             EEEEEeCCCCeEEEEEECCC-CceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            46777766555555555553 23333332   22211  1356666654          277888887552 11112222


Q ss_pred             e--cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EEEEEEcccCCCCeeEEEEccC
Q psy2762         155 I--AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIEETKLENHSDWVRDVAWAPS  231 (318)
Q Consensus       155 ~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~~~~~~~~h~~~V~~v~~sp~  231 (318)
                      +  .....+|.++.--.                  +. |+.+. ++.|.+|++...+ +.....+..+. .+.++...  
T Consensus        82 i~~~~~~g~V~ai~~~~------------------~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~-~i~sl~~~--  138 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSFN------------------GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPF-YITSLSVF--  138 (321)
T ss_dssp             EEEEEESS-EEEEEEET------------------TE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSS-SEEEEEEE--
T ss_pred             EEEEeecCcceEhhhhC------------------CE-EEEee-cCEEEEEEccCcccchhhheecceE-EEEEEecc--
Confidence            2  23445666655321                  23 43333 4789999998877 66555554433 57777665  


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                          +.+|+.|...+.+.++...... .....+.  ....++.++.|-+|++.++.+..+|.+.++..+.
T Consensus       139 ----~~~I~vgD~~~sv~~~~~~~~~-~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~  203 (321)
T PF03178_consen  139 ----KNYILVGDAMKSVSLLRYDEEN-NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP  203 (321)
T ss_dssp             ----TTEEEEEESSSSEEEEEEETTT-E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred             ----ccEEEEEEcccCEEEEEEEccC-CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence                3478888888889988554422 1111221  2245688999997878888899999999999864

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=96.75  E-value=0.27  Score=41.29  Aligned_cols=193  Identities=14%  Similarity=0.110  Sum_probs=98.5

Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE
Q psy2762          23 YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW  102 (318)
Q Consensus        23 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~  102 (318)
                      +++.+++.++.++.|..||..           +|+.+-.... .+.+.....   ..+..++.++.|+.+..+|..+++.
T Consensus        34 ~~~~~v~~~~~~~~l~~~d~~-----------tG~~~W~~~~-~~~~~~~~~---~~~~~v~v~~~~~~l~~~d~~tG~~   98 (238)
T PF13360_consen   34 PDGGRVYVASGDGNLYALDAK-----------TGKVLWRFDL-PGPISGAPV---VDGGRVYVGTSDGSLYALDAKTGKV   98 (238)
T ss_dssp             EETTEEEEEETTSEEEEEETT-----------TSEEEEEEEC-SSCGGSGEE---EETTEEEEEETTSEEEEEETTTSCE
T ss_pred             EeCCEEEEEcCCCEEEEEECC-----------CCCEEEEeec-cccccceee---ecccccccccceeeeEecccCCcce
Confidence            366777778899999999986           3555544443 222111111   1256677777899999999888874


Q ss_pred             EEE-EEecC--CC-cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc-cee-eeCCCCCCCcc
Q psy2762         103 FKY-YEYNN--HD-SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC-NAV-SWGPGIGSLSE  176 (318)
Q Consensus       103 ~~~-~~~~~--h~-~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v-~~~-~~~p~~~~~~~  176 (318)
                      .-. .....  .. ......++.    +..++.+..++.|..+|...++..|..   .....+. ..+ .+..       
T Consensus        99 ~W~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~l~~~d~~tG~~~w~~---~~~~~~~~~~~~~~~~-------  164 (238)
T PF13360_consen   99 LWSIYLTSSPPAGVRSSSSPAVD----GDRLYVGTSSGKLVALDPKTGKLLWKY---PVGEPRGSSPISSFSD-------  164 (238)
T ss_dssp             EEEEEE-SSCTCSTB--SEEEEE----TTEEEEEETCSEEEEEETTTTEEEEEE---ESSTT-SS--EEEETT-------
T ss_pred             eeeeccccccccccccccCceEe----cCEEEEEeccCcEEEEecCCCcEEEEe---ecCCCCCCcceeeecc-------
Confidence            322 11111  11 111223333    335667777888888886555422221   1111010 000 0000       


Q ss_pred             ccccCCCCCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         177 LDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       177 ~~~~~~~~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                        ......-..+ .+..++.++ .+.+ |..+++..  -...  ...+..+ ..+    .+..|+.++.|+.|..||+.+
T Consensus       165 --~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~--w~~~--~~~~~~~-~~~----~~~~l~~~~~~~~l~~~d~~t  231 (238)
T PF13360_consen  165 --INGSPVISDG-RVYVSSGDGRVVAV-DLATGEKL--WSKP--ISGIYSL-PSV----DGGTLYVTSSDGRLYALDLKT  231 (238)
T ss_dssp             --EEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEE--EEEC--SS-ECEC-EEC----CCTEEEEEETTTEEEEEETTT
T ss_pred             --cccceEEECC-EEEEEcCCCeEEEE-ECCCCCEE--EEec--CCCccCC-cee----eCCEEEEEeCCCEEEEEECCC
Confidence              0000000012 455566666 4666 98888632  1211  1112221 223    256777777999999999987


Q ss_pred             Cc
Q psy2762         256 YV  257 (318)
Q Consensus       256 ~~  257 (318)
                      ..
T Consensus       232 G~  233 (238)
T PF13360_consen  232 GK  233 (238)
T ss_dssp             TE
T ss_pred             CC
Confidence            53

...

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.61  E-value=0.47  Score=42.15  Aligned_cols=62  Identities=15%  Similarity=0.249  Sum_probs=38.4

Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEEEEEECCCCceEEEeeeccc
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVSLWKENTDGAWQCITEMGKT  312 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~iW~~~~~~~~~~~~~~~~~  312 (318)
                      |.++|+.+..  ....++ ...++.+++.+.|.+ +|.+.+ .++.+.+||..++...+.+++++..
T Consensus       271 VWv~D~~t~k--rv~Ri~-l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~~  334 (342)
T PF06433_consen  271 VWVYDLKTHK--RVARIP-LEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGET  334 (342)
T ss_dssp             EEEEETTTTE--EEEEEE-EEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---SSS
T ss_pred             EEEEECCCCe--EEEEEe-CCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCCC
Confidence            5566666543  222222 234688999999875 554444 5899999999998888899888764

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG4441|consensus

Probab=96.53  E-value=0.12  Score=49.82  Aligned_cols=182  Identities=17%  Similarity=0.160  Sum_probs=94.7

Q ss_pred             CCCEEEEeeCC------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-----eE
Q psy2762          24 LGLYLATCSSD------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-----KV   92 (318)
Q Consensus        24 ~g~~l~s~s~D------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-----~v   92 (318)
                      +|.+.++||.|      .++-.||...         ..+..+..+.........+..    +|.+.|.||.||     +|
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~---------~~W~~~a~M~~~R~~~~v~~l----~g~iYavGG~dg~~~l~sv  398 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRT---------NQWTPVAPMNTKRSDFGVAVL----DGKLYAVGGFDGEKSLNSV  398 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCC---------CceeccCCccCccccceeEEE----CCEEEEEeccccccccccE
Confidence            45677788888      3455555532         123333222222222222222    378899999996     47


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE------EEEEeecCCCCcceeeecccccccceee
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI------SFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i------~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      -.||+.+.+|.....+..   .....+...-. +.+.++|+.++.-      ..||+.  .+.|....-+.-......++
T Consensus       399 E~YDp~~~~W~~va~m~~---~r~~~gv~~~~-g~iYi~GG~~~~~~~l~sve~YDP~--t~~W~~~~~M~~~R~~~g~a  472 (571)
T KOG4441|consen  399 ECYDPVTNKWTPVAPMLT---RRSGHGVAVLG-GKLYIIGGGDGSSNCLNSVECYDPE--TNTWTLIAPMNTRRSGFGVA  472 (571)
T ss_pred             EEecCCCCcccccCCCCc---ceeeeEEEEEC-CEEEEEcCcCCCccccceEEEEcCC--CCceeecCCcccccccceEE
Confidence            888888776644433322   22222222211 6788888877644      345543  33343211110000001111


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCC-----eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-----LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-----~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      .-.                  +...+.||.|+     +|..+|..+++|.....+......+-.+..      ++...+.
T Consensus       473 ~~~------------------~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~------~~~ly~v  528 (571)
T KOG4441|consen  473 VLN------------------GKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL------GGKLYAV  528 (571)
T ss_pred             EEC------------------CEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE------CCEEEEE
Confidence            111                  35677888776     377899998888665444444444433333      3677888


Q ss_pred             EeCCCeE
Q psy2762         242 CSQDRKV  248 (318)
Q Consensus       242 ~s~D~~i  248 (318)
                      |+.|+.-
T Consensus       529 GG~~~~~  535 (571)
T KOG4441|consen  529 GGFDGNN  535 (571)
T ss_pred             ecccCcc
Confidence            8887653

>KOG4640|consensus

Probab=96.45  E-value=0.019  Score=53.95  Aligned_cols=94  Identities=15%  Similarity=0.151  Sum_probs=72.7

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeE-EEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW-QVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .|..+.|+|.-.+||.+..+|.|.+..++            ...+-++.-|.-+|+ +++|.+  ||++||.|-.||+|+
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n------------~qRlwtip~p~~~v~~sL~W~~--DGkllaVg~kdG~I~   87 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN------------WQRLWTIPIPGENVTASLCWRP--DGKLLAVGFKDGTIR   87 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec------------cceeEeccCCCCccceeeeecC--CCCEEEEEecCCeEE
Confidence            57778999999999999999999999876            245677777777777 999964  599999999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPK  123 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~  123 (318)
                      +-|+..+...... ..-....|.++-|.|.
T Consensus        88 L~Dve~~~~l~~~-~~s~e~~is~~~w~~~  116 (665)
T KOG4640|consen   88 LHDVEKGGRLVSF-LFSVETDISKGIWDRI  116 (665)
T ss_pred             EEEccCCCceecc-ccccccchheeecccc
Confidence            9999877533321 1123456777777653

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.35  E-value=0.24  Score=45.90  Aligned_cols=169  Identities=17%  Similarity=0.183  Sum_probs=84.1

Q ss_pred             CcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         112 DSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       112 ~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      ...+..-+|+|+.......+-...+  .+.++++..+...    .+.........-.|+|+.                .+
T Consensus       192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~----~i~~~~g~~~~P~fspDG----------------~~  251 (425)
T COG0823         192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP----VILNFNGNNGAPAFSPDG----------------SK  251 (425)
T ss_pred             CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccc----eeeccCCccCCccCCCCC----------------CE
Confidence            3456667888885432222222222  4666666444321    111122223345678863                24


Q ss_pred             eEEEecCCCeEEEE--EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCcceeeEEeee
Q psy2762         190 RLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       190 ~lasgs~d~~i~iw--d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      .+.+...|+...||  |+.+++...+....+..   ..=+|+|    +|+.|+=.+ ..|.-+||-..-...........
T Consensus       252 l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~---~~Ps~sp----dG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~  324 (425)
T COG0823         252 LAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGIN---TSPSWSP----DGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFS  324 (425)
T ss_pred             EEEEECCCCCccEEEEcCCCCcceecccCCccc---cCccCCC----CCCEEEEEeCCCCCcceEEECCCCCceeEeecc
Confidence            56667777765555  66665432222222222   1335555    466665554 46666666433222111111111


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCC-Ce--EEEEEECCCCceEEEee
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGD-NS--VSLWKENTDGAWQCITE  308 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D-~~--v~iW~~~~~~~~~~~~~  308 (318)
                      ..... .-.|||||++|+..+.. |.  +.+.+...++.|+++..
T Consensus       325 ~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~  368 (425)
T COG0823         325 GGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTS  368 (425)
T ss_pred             CCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccc
Confidence            22222 66899999999988753 33  55555555555665554

>PHA03098 kelch-like protein; Provisional

Probab=96.25  E-value=0.62  Score=44.70  Aligned_cols=112  Identities=13%  Similarity=0.204  Sum_probs=57.6

Q ss_pred             ceEEEecCC------CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--------eEEEEEcC
Q psy2762         189 KRLVSGGCD------NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--------KVIIWTSN  254 (318)
Q Consensus       189 ~~lasgs~d------~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--------~i~vw~~~  254 (318)
                      +.++.||.+      +.+..||..+++|.....+.........+..      ++..++.||.+.        .+.+||..
T Consensus       391 ~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~v~~yd~~  464 (534)
T PHA03098        391 LIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYH------DGKIYVIGGISYIDNIKVYNIVESYNPV  464 (534)
T ss_pred             EEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEE------CCEEEEECCccCCCCCcccceEEEecCC
Confidence            445566632      4588899888887654433222111112222      255666666432        37778876


Q ss_pred             CCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECCCCceEEEeee
Q psy2762         255 DYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       255 ~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~~~~~~~~~~~  309 (318)
                      +. .|......... .........+++.++.||.+     +.+.++|.+. .+|..+..+
T Consensus       465 ~~-~W~~~~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~  521 (534)
T PHA03098        465 TN-KWTELSSLNFP-RINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKT-NTWTLFCKF  521 (534)
T ss_pred             CC-ceeeCCCCCcc-cccceEEEECCEEEEEcCCcCCcccceeEEEeCCC-CEEEecCCC
Confidence            53 34321111111 11111122267777777754     4677887554 589877653

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.24  E-value=0.016  Score=35.63  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=28.6

Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ..+.|..++|||+..+||.+..||.|.|++++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            34579999999999999999999999999873

>PHA02790 Kelch-like protein; Provisional

Probab=96.21  E-value=0.69  Score=43.79  Aligned_cols=190  Identities=9%  Similarity=0.110  Sum_probs=92.4

Q ss_pred             CcEEEEEECCC-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCcce
Q psy2762          80 GTLLASCSYDR-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSWES  152 (318)
Q Consensus        80 ~~~las~s~Dg-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~~~  152 (318)
                      +.+++.||.++     ++..||+....|.....+.........++  -+  +.+.+.|+.++  .+..|++  ..+.|..
T Consensus       272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~--~~iYviGG~~~~~sve~ydp--~~n~W~~  345 (480)
T PHA02790        272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--AN--NKLYVVGGLPNPTSVERWFH--GDAAWVN  345 (480)
T ss_pred             CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--EC--CEEEEECCcCCCCceEEEEC--CCCeEEE
Confidence            46667777653     56678887776655444332222222222  23  56778887643  4555554  3333422


Q ss_pred             eeeccccc-ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcccCCCCeeEEEE
Q psy2762         153 RKIAAHTI-GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLENHSDWVRDVAW  228 (318)
Q Consensus       153 ~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~  228 (318)
                      ..-..... ....++..                   ++..+.||.++   .+..||..+++|.....+.........+.+
T Consensus       346 ~~~l~~~r~~~~~~~~~-------------------g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~  406 (480)
T PHA02790        346 MPSLLKPRCNPAVASIN-------------------NVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVF  406 (480)
T ss_pred             CCCCCCCCcccEEEEEC-------------------CEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEE
Confidence            11111000 00111111                   34556666543   477899888888654433322222222222


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECCCCce
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAW  303 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~~~~~  303 (318)
                            ++...+.|+   .+-+||.++. .|...........-.+++ --+|+..+.||.+     .++..+|..+ ++|
T Consensus       407 ------~~~IYv~GG---~~e~ydp~~~-~W~~~~~m~~~r~~~~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~-~~W  474 (480)
T PHA02790        407 ------GRRLFLVGR---NAEFYCESSN-TWTLIDDPIYPRDNPELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRT-YSW  474 (480)
T ss_pred             ------CCEEEEECC---ceEEecCCCC-cEeEcCCCCCCccccEEE-EECCEEEEECCcCCCcccceEEEEECCC-CeE
Confidence                  245555553   4677887653 464321111111111222 2377888888764     4677887543 577


Q ss_pred             EEE
Q psy2762         304 QCI  306 (318)
Q Consensus       304 ~~~  306 (318)
                      ...
T Consensus       475 ~~~  477 (480)
T PHA02790        475 NIW  477 (480)
T ss_pred             Eec
Confidence            654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.19  E-value=1  Score=41.43  Aligned_cols=229  Identities=14%  Similarity=0.067  Sum_probs=111.1

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEE-EecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQV-AWAHPQFGTLLASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v-~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~  103 (318)
                      +..++.++.++.+..+|.++           |+.+=..+.. +.+.+- ..    .+..++.+..++.+..+|..+++  
T Consensus       120 ~~~v~v~~~~g~l~ald~~t-----------G~~~W~~~~~-~~~~ssP~v----~~~~v~v~~~~g~l~ald~~tG~--  181 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAED-----------GEVAWQTKVA-GEALSRPVV----SDGLVLVHTSNGMLQALNESDGA--  181 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCC-----------CCCcccccCC-CceecCCEE----ECCEEEEECCCCEEEEEEccCCC--
Confidence            44566677888888888763           2322222111 122211 11    13456677788999999998886  


Q ss_pred             EEEEecCCCcCeE-EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc---ccc-ccceeeeCCCCCCCcccc
Q psy2762         104 KYYEYNNHDSSVN-SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA---HTI-GCNAVSWGPGIGSLSELD  178 (318)
Q Consensus       104 ~~~~~~~h~~~v~-~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~---h~~-~v~~~~~~p~~~~~~~~~  178 (318)
                      ..++......... ...-+|.-.+..+..++.++.+..++..++...|+......   +.. ....+.-+|-        
T Consensus       182 ~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~--------  253 (394)
T PRK11138        182 VKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPV--------  253 (394)
T ss_pred             EeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcE--------
Confidence            3343332110000 00011100011345566778877777655543333211000   000 0000011110        


Q ss_pred             ccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-
Q psy2762         179 LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-  257 (318)
Q Consensus       179 ~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-  257 (318)
                            -. +..+..++.++.+..+|..+++..=...+..    ...+..      .+..|..++.|+.+...|..+.. 
T Consensus       254 ------v~-~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~~------~~~~vy~~~~~g~l~ald~~tG~~  316 (394)
T PRK11138        254 ------VV-GGVVYALAYNGNLVALDLRSGQIVWKREYGS----VNDFAV------DGGRIYLVDQNDRVYALDTRGGVE  316 (394)
T ss_pred             ------EE-CCEEEEEEcCCeEEEEECCCCCEEEeecCCC----ccCcEE------ECCEEEEEcCCCeEEEEECCCCcE
Confidence                  00 2356667788999999988875321111111    111111      14466777889999998887643 


Q ss_pred             ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .|....+..  ....+...  .+..|..++.||.|.+.|..++
T Consensus       317 ~W~~~~~~~--~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG  355 (394)
T PRK11138        317 LWSQSDLLH--RLLTAPVL--YNGYLVVGDSEGYLHWINREDG  355 (394)
T ss_pred             EEcccccCC--CcccCCEE--ECCEEEEEeCCCEEEEEECCCC
Confidence            122111100  01111111  2446667888999998887665

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=96.14  E-value=1.1  Score=41.24  Aligned_cols=179  Identities=9%  Similarity=0.013  Sum_probs=88.1

Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEec--CCCc-----CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYN--NHDS-----SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~--~h~~-----~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                      ..++.++.++.+...|..+++.  .++.+  ....     ....+.-+|--.+..+..++.++.+..+|...++..|...
T Consensus       206 ~~v~~~~~~g~v~a~d~~~G~~--~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~  283 (394)
T PRK11138        206 GGAIVGGDNGRVSAVLMEQGQL--IWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKRE  283 (394)
T ss_pred             CEEEEEcCCCEEEEEEccCChh--hheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeec
Confidence            3466677789998888887752  22211  1000     0001111220001234455678888777765554323211


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                       + +   .......                   .+..|..++.++.+..+|..+++..=......+. ...+....    
T Consensus       284 -~-~---~~~~~~~-------------------~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~sp~v~----  334 (394)
T PRK11138        284 -Y-G---SVNDFAV-------------------DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHR-LLTAPVLY----  334 (394)
T ss_pred             -C-C---CccCcEE-------------------ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCC-cccCCEEE----
Confidence             0 0   0000000                   0245777888999999998877531111111111 11111111    


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEE-EEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN-VSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~-v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                        +..|+.++.||.|.+.|..+....  .........+.+ -.+  .+..|..++.||.|..++
T Consensus       335 --~g~l~v~~~~G~l~~ld~~tG~~~--~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~  392 (394)
T PRK11138        335 --NGYLVVGDSEGYLHWINREDGRFV--AQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAIT  392 (394)
T ss_pred             --CCEEEEEeCCCEEEEEECCCCCEE--EEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEe
Confidence              346778899999999998775421  111111122222 111  234667788999887765

>KOG2444|consensus

Probab=96.09  E-value=0.0081  Score=49.57  Aligned_cols=104  Identities=9%  Similarity=0.114  Sum_probs=56.0

Q ss_pred             ceEEEecCCCeEEEEEccCCeEEEEEE-cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec
Q psy2762         189 KRLVSGGCDNLIKIWKQEGDKWIEETK-LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF  267 (318)
Q Consensus       189 ~~lasgs~d~~i~iwd~~~~~~~~~~~-~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~  267 (318)
                      ..+++|+.+|.|++|+.....  ++.. ...-.+.|-+ -+ |.. .++.+..+++.|+.||.|+......  ......|
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g--~~~d~~~s~~e~i~~-~I-p~~-~~~~~~c~~~~dg~ir~~n~~p~k~--~g~~g~h  143 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEG--AHSDRVCSGEESIDL-GI-PNG-RDSSLGCVGAQDGRIRACNIKPNKV--LGYVGQH  143 (238)
T ss_pred             ceEEeecccceEEEecCCccc--hHHHhhhccccccee-cc-ccc-cccceeEEeccCCceeeeccccCce--eeeeccc
Confidence            468999999999999754110  0000 0111111211 11 221 2455788899999999998875431  1112223


Q ss_pred             C-CcEEEEEEcCCCCEEEEE--eCCCeEEEEEECC
Q psy2762         268 D-DVVWNVSWSLTGDILTVS--CGDNSVSLWKENT  299 (318)
Q Consensus       268 ~-~~v~~v~~spdg~~l~s~--~~D~~v~iW~~~~  299 (318)
                      . .++.....+..++.|+++  |.|..++.|++..
T Consensus       144 ~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  144 NFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             cCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            3 333344444455566666  6666666666544

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=96.09  E-value=0.11  Score=51.34  Aligned_cols=98  Identities=12%  Similarity=0.115  Sum_probs=66.2

Q ss_pred             EEEecCCCeEEEEEccCC--eEEEE--EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         191 LVSGGCDNLIKIWKQEGD--KWIEE--TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       191 lasgs~d~~i~iwd~~~~--~~~~~--~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      ...|-.++.+..||++-.  +.+..  ..+ ..+..-.|++-+.     ..+||.||.+|.||+||--+.+  .-..+++
T Consensus       545 tflGls~n~lfriDpR~~~~k~v~~~~k~Y-~~~~~Fs~~aTt~-----~G~iavgs~~G~IRLyd~~g~~--AKT~lp~  616 (794)
T PF08553_consen  545 TFLGLSDNSLFRIDPRLSGNKLVDSQSKQY-SSKNNFSCFATTE-----DGYIAVGSNKGDIRLYDRLGKR--AKTALPG  616 (794)
T ss_pred             eEEEECCCceEEeccCCCCCceeecccccc-ccCCCceEEEecC-----CceEEEEeCCCcEEeecccchh--hhhcCCC
Confidence            456777788999997643  22211  111 1222344555544     4579999999999999854322  2234567


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ...+|..|..+.||++|+.++. .-|-|.+.
T Consensus       617 lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  617 LGDPIIGIDVTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             CCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence            7889999999999999998884 57778775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.09  E-value=0.52  Score=45.73  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEE---EcCCCcce--eeEEe-eecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW---TSNDYVTW--TPFIM-NTFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw---~~~~~~~~--~~~~~-~~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      ...|..+.|||+    |..|+-.. ++.|.|-   ........  .+..+ ......+.+++|.+++.++ .+..++...
T Consensus       447 ~g~Issl~wSpD----G~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~  520 (591)
T PRK13616        447 PGPISELQLSRD----GVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHP  520 (591)
T ss_pred             CCCcCeEEECCC----CCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCc
Confidence            346999999997    67666655 4667663   22222100  11112 2334456889999999855 556667778


Q ss_pred             EEEECCCCceEE
Q psy2762         294 LWKENTDGAWQC  305 (318)
Q Consensus       294 iW~~~~~~~~~~  305 (318)
                      +|.++.+|....
T Consensus       521 v~~v~vDG~~~~  532 (591)
T PRK13616        521 VWYVNLDGSNSD  532 (591)
T ss_pred             eEEEecCCcccc
Confidence            899888877654

>PHA02790 Kelch-like protein; Provisional

Probab=96.07  E-value=0.76  Score=43.53  Aligned_cols=132  Identities=11%  Similarity=0.140  Sum_probs=65.1

Q ss_pred             CcEEEEEECC--CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---eEEEEEeecCCCCcceee
Q psy2762          80 GTLLASCSYD--RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---TISFLTYMSDTNSWESRK  154 (318)
Q Consensus        80 ~~~las~s~D--g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---~i~i~~~~~~~~~~~~~~  154 (318)
                      +.+.+.||.+  ..+..||.....|.....+.........+++  +  +.+.+.|+.++   .+..||+.  .+.|....
T Consensus       319 ~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~--~--g~IYviGG~~~~~~~ve~ydp~--~~~W~~~~  392 (480)
T PHA02790        319 NKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASI--N--NVIYVIGGHSETDTTTEYLLPN--HDQWQFGP  392 (480)
T ss_pred             CEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEE--C--CEEEEecCcCCCCccEEEEeCC--CCEEEeCC
Confidence            6777777764  3578888877666554333321111222222  2  56778887654   34456653  33343211


Q ss_pred             ecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCC
Q psy2762         155 IAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       155 ~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~  233 (318)
                      ..... .....++..                   +...+.|+   .+-+||.++++|.....+.........+..     
T Consensus       393 ~m~~~r~~~~~~~~~-------------------~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~v~-----  445 (480)
T PHA02790        393 STYYPHYKSCALVFG-------------------RRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELIIV-----  445 (480)
T ss_pred             CCCCccccceEEEEC-------------------CEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEEEE-----
Confidence            11111 001111111                   23445554   467899988888655544332222222222     


Q ss_pred             CCccEEEEEeCC
Q psy2762         234 LSKCMIASCSQD  245 (318)
Q Consensus       234 ~~~~~l~s~s~D  245 (318)
                       ++...+.||.+
T Consensus       446 -~~~IYviGG~~  456 (480)
T PHA02790        446 -DNKLLLIGGFY  456 (480)
T ss_pred             -CCEEEEECCcC
Confidence             25667777754

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=95.96  E-value=0.35  Score=45.08  Aligned_cols=144  Identities=19%  Similarity=0.245  Sum_probs=72.4

Q ss_pred             CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccce
Q psy2762         111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR  190 (318)
Q Consensus       111 h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~  190 (318)
                      .......++++|.  +..++. ..||...|+..  .  .+.  .  ...+......|.+.                  ..
T Consensus        31 ~~~~p~~ls~npn--gr~v~V-~g~geY~iyt~--~--~~r--~--k~~G~g~~~vw~~~------------------n~   81 (443)
T PF04053_consen   31 CEIYPQSLSHNPN--GRFVLV-CGDGEYEIYTA--L--AWR--N--KAFGSGLSFVWSSR------------------NR   81 (443)
T ss_dssp             -SS--SEEEE-TT--SSEEEE-EETTEEEEEET--T--TTE--E--EEEEE-SEEEE-TS------------------SE
T ss_pred             CCcCCeeEEECCC--CCEEEE-EcCCEEEEEEc--c--CCc--c--cccCceeEEEEecC------------------cc
Confidence            3445788999998  555655 44666666642  1  111  1  11234567778773                  24


Q ss_pred             EEEecCCCeEEEEE-ccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCC
Q psy2762         191 LVSGGCDNLIKIWK-QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD  269 (318)
Q Consensus       191 lasgs~d~~i~iwd-~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~  269 (318)
                      +|+-...++|+|+. ++... .....++   ..+..|-.       |.+|+..+.+ .|.+||.+...  ...... . .
T Consensus        82 yAv~~~~~~I~I~kn~~~~~-~k~i~~~---~~~~~If~-------G~LL~~~~~~-~i~~yDw~~~~--~i~~i~-v-~  145 (443)
T PF04053_consen   82 YAVLESSSTIKIYKNFKNEV-VKSIKLP---FSVEKIFG-------GNLLGVKSSD-FICFYDWETGK--LIRRID-V-S  145 (443)
T ss_dssp             EEEE-TTS-EEEEETTEE-T-T-----S---S-EEEEE--------SSSEEEEETT-EEEEE-TTT----EEEEES-S--
T ss_pred             EEEEECCCeEEEEEcCcccc-ceEEcCC---cccceEEc-------CcEEEEECCC-CEEEEEhhHcc--eeeEEe-c-C
Confidence            77777788999973 32211 0011111   12444422       5566666555 89999988643  122221 1 2


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         270 VVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|..|.|+++|+++|-.+.+ ++.|++.+..
T Consensus       146 ~vk~V~Ws~~g~~val~t~~-~i~il~~~~~  175 (443)
T PF04053_consen  146 AVKYVIWSDDGELVALVTKD-SIYILKYNLE  175 (443)
T ss_dssp             E-EEEEE-TTSSEEEEE-S--SEEEEEE-HH
T ss_pred             CCcEEEEECCCCEEEEEeCC-eEEEEEecch
Confidence            48999999999999988865 7888876553

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PHA03098 kelch-like protein; Provisional

Probab=95.88  E-value=1.2  Score=42.69  Aligned_cols=51  Identities=12%  Similarity=0.152  Sum_probs=27.6

Q ss_pred             CcEEEEEECC-----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          80 GTLLASCSYD-----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        80 ~~~las~s~D-----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +.+++.||.+     ..+..||+.+..|.....+...... .+++.. +  +.+++.|+.
T Consensus       343 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~~~-~--~~iYv~GG~  398 (534)
T PHA03098        343 NRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVVNV-N--NLIYVIGGI  398 (534)
T ss_pred             CEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEEEE-C--CEEEEECCc
Confidence            6777778765     3577888887766543333211111 122222 2  466777763

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=95.78  E-value=1.6  Score=40.39  Aligned_cols=66  Identities=15%  Similarity=0.297  Sum_probs=45.6

Q ss_pred             eeecCCCCEEEEeeCC-----------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          19 AEMDYLGLYLATCSSD-----------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ++.+|.|-.||.-..+           ..|+||+..            |+++.++.=-.+.+-++.|+.   ...|+.-.
T Consensus        34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s------------G~ll~~i~w~~~~iv~~~wt~---~e~LvvV~   98 (410)
T PF04841_consen   34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS------------GKLLSSIPWDSGRIVGMGWTD---DEELVVVQ   98 (410)
T ss_pred             EEEcCCCceEEEEecCcccccccCCCCcEEEEECCC------------CCEeEEEEECCCCEEEEEECC---CCeEEEEE
Confidence            4556777666665433           147777764            556665543338899999963   46677778


Q ss_pred             CCCeEEEEeCCC
Q psy2762          88 YDRKVIIWRGDN   99 (318)
Q Consensus        88 ~Dg~v~vWd~~~   99 (318)
                      .||+++++|+..
T Consensus        99 ~dG~v~vy~~~G  110 (410)
T PF04841_consen   99 SDGTVRVYDLFG  110 (410)
T ss_pred             cCCEEEEEeCCC
Confidence            999999999863

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.47  E-value=1.3  Score=43.05  Aligned_cols=104  Identities=16%  Similarity=0.361  Sum_probs=70.0

Q ss_pred             EEEecCC-CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC------cceee--
Q psy2762         191 LVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY------VTWTP--  261 (318)
Q Consensus       191 lasgs~d-~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~------~~~~~--  261 (318)
                      +|...++ ..+.|||...+...-...+ ...+.|.++.|...  .+++.+.+.|....|.++.-...      ..|.+  
T Consensus        43 ~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst--~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~  119 (631)
T PF12234_consen   43 IAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTST--PDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR  119 (631)
T ss_pred             EEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeec--CCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence            4444444 4699999988765444455 34577999999875  46889999999999999964221      11221  


Q ss_pred             -EEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         262 -FIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       262 -~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                       ..+..++ .+|.+..|-+||..++.+  ++.+.|++...
T Consensus       120 ~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~~  157 (631)
T PF12234_consen  120 KIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKWL  157 (631)
T ss_pred             EEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCCc
Confidence             1123344 579999999999776533  46788887433

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=95.45  E-value=0.64  Score=42.63  Aligned_cols=113  Identities=12%  Similarity=0.184  Sum_probs=62.3

Q ss_pred             ecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe---------
Q psy2762         194 GGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---------  264 (318)
Q Consensus       194 gs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~---------  264 (318)
                      +..-.++++||..+++..+...+.........|.|..+-. ...-++.+....+|..|--.....|.....         
T Consensus       218 ~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~-~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~  296 (461)
T PF05694_consen  218 GKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPD-ANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVE  296 (461)
T ss_dssp             H-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT---EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--
T ss_pred             ccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCC-ccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccC
Confidence            3445689999999998777766644334467888886522 233455565677777765433333432211         


Q ss_pred             ----eec-------CCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCceEEEe
Q psy2762         265 ----NTF-------DDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       265 ----~~~-------~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~~~~~~  307 (318)
                          +..       ..-|..+..|.|.++|..++. +|.||.||+......+.+.
T Consensus       297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~g  351 (461)
T PF05694_consen  297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVG  351 (461)
T ss_dssp             SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEE
T ss_pred             cccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEe
Confidence                111       245889999999999998885 9999999998866655444

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=95.42  E-value=2.2  Score=39.60  Aligned_cols=182  Identities=15%  Similarity=0.180  Sum_probs=94.7

Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .+.++++.+++......+.++.   ..-+|+||+ ..++.+...|+...||-.....+.  ..++..-......=+|+|+
T Consensus       219 ~i~~~~l~~g~~~~i~~~~g~~---~~P~fspDG-~~l~f~~~rdg~~~iy~~dl~~~~--~~~Lt~~~gi~~~Ps~spd  292 (425)
T COG0823         219 RIYYLDLNTGKRPVILNFNGNN---GAPAFSPDG-SKLAFSSSRDGSPDIYLMDLDGKN--LPRLTNGFGINTSPSWSPD  292 (425)
T ss_pred             eEEEEeccCCccceeeccCCcc---CCccCCCCC-CEEEEEECCCCCccEEEEcCCCCc--ceecccCCccccCccCCCC
Confidence            5778888877654444444433   345899996 456667777887777654333222  2222221111224457776


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEE--EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-Ce
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-RK  247 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw--d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~  247 (318)
                      .                .....+.+..|.-+||  +.+.+.. +..++.+-...  .-.|+|+    |.+|+..+.. +.
T Consensus       293 G----------------~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~--~p~~Spd----G~~i~~~~~~~g~  349 (425)
T COG0823         293 G----------------SKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNS--NPVWSPD----GDKIVFESSSGGQ  349 (425)
T ss_pred             C----------------CEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCc--CccCCCC----CCEEEEEeccCCc
Confidence            3                1233445555655555  4555442 23333333332  4566775    7888877753 43


Q ss_pred             --EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEECCCCceE
Q psy2762         248 --VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-SVSLWKENTDGAWQ  304 (318)
Q Consensus       248 --i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~-~v~iW~~~~~~~~~  304 (318)
                        |-+.+..+...++   ..........-+|.|+|+.|...+.-+ .=.++.+...+.+.
T Consensus       350 ~~i~~~~~~~~~~~~---~lt~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~~  406 (425)
T COG0823         350 WDIDKNDLASGGKIR---ILTSTYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRVS  406 (425)
T ss_pred             eeeEEeccCCCCcEE---EccccccCCCCCcCCCCceEEEeccCCCCceEEEeeccceeE
Confidence              4445444332111   112222344567888887766554322 33455555555544

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=95.30  E-value=0.75  Score=45.76  Aligned_cols=137  Identities=13%  Similarity=0.130  Sum_probs=79.9

Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC-----CcEEEEeecCCeEEEEEeecCCCCcceeeecccc--
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF-----GLILACGSSDGTISFLTYMSDTNSWESRKIAAHT--  159 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-----~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~--  159 (318)
                      .....+.--|+..++.+..+.+.. ..+|..+  .|+..     ..-...|-.+..+..||++...+  .+.....|.  
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~-~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~--k~v~~~~k~Y~  575 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHD-DIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGN--KLVDSQSKQYS  575 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCC-CcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCC--ceeeccccccc
Confidence            345677777888888777766532 2335544  44311     11233556667777788754321  111111111  


Q ss_pred             --cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         160 --IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       160 --~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                        ..-.+++-+.                  .-+||.||.+|.||+||..+..  ....+++-..+|..|+-+.+    |.
T Consensus       576 ~~~~Fs~~aTt~------------------~G~iavgs~~G~IRLyd~~g~~--AKT~lp~lG~pI~~iDvt~D----Gk  631 (794)
T PF08553_consen  576 SKNNFSCFATTE------------------DGYIAVGSNKGDIRLYDRLGKR--AKTALPGLGDPIIGIDVTAD----GK  631 (794)
T ss_pred             cCCCceEEEecC------------------CceEEEEeCCCcEEeecccchh--hhhcCCCCCCCeeEEEecCC----Cc
Confidence              1111222111                  1379999999999999965432  34457788899999999986    66


Q ss_pred             EEEEEeCCCeEEEEEc
Q psy2762         238 MIASCSQDRKVIIWTS  253 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~  253 (318)
                      +|+..+ +..|.|.+.
T Consensus       632 wilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  632 WILATC-KTYLLLIDT  646 (794)
T ss_pred             EEEEee-cceEEEEEE
Confidence            655443 566777764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2395|consensus

Probab=95.24  E-value=0.28  Score=45.57  Aligned_cols=98  Identities=11%  Similarity=0.099  Sum_probs=61.5

Q ss_pred             EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE---EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762         192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV---AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD  268 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v---~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~  268 (318)
                      +.|-.|+.|--||++-...-.+..-++|.. .+.-   ||..+   ...+||.||.+|.||+||-...+  .-..++++.
T Consensus       398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy-~~k~nFsc~aTT---~sG~IvvgS~~GdIRLYdri~~~--AKTAlPgLG  471 (644)
T KOG2395|consen  398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQY-STKNNFSCFATT---ESGYIVVGSLKGDIRLYDRIGRR--AKTALPGLG  471 (644)
T ss_pred             EEeecCCceEEecccccCcceeeeeecccc-ccccccceeeec---CCceEEEeecCCcEEeehhhhhh--hhhcccccC
Confidence            456677778888865321101111223321 2221   23333   35589999999999999874322  123466788


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ++|..|..+.||++|+.++. ..+-+-+
T Consensus       472 ~~I~hVdvtadGKwil~Tc~-tyLlLi~  498 (644)
T KOG2395|consen  472 DAIKHVDVTADGKWILATCK-TYLLLID  498 (644)
T ss_pred             CceeeEEeeccCcEEEEecc-cEEEEEE
Confidence            89999999999999988874 4555554

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=94.91  E-value=0.098  Score=32.10  Aligned_cols=32  Identities=16%  Similarity=0.029  Sum_probs=28.9

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLD   43 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~   43 (318)
                      -...|..+.|+|...+||.+..||.|.|+.++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            35579999999999999999999999999884

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=94.61  E-value=3.1  Score=37.00  Aligned_cols=182  Identities=10%  Similarity=0.111  Sum_probs=99.1

Q ss_pred             CcEEEEEEC----------CCeEEEEeCCCC-----cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee
Q psy2762          80 GTLLASCSY----------DRKVIIWRGDNG-----NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM  144 (318)
Q Consensus        80 ~~~las~s~----------Dg~v~vWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~  144 (318)
                      ..+|+.|..          .|.|.++++...     +.....+. ..+++|++++--.   +.++ ++. ++.|.+|++.
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~~---~~lv-~~~-g~~l~v~~l~  115 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHST-EVKGPVTAICSFN---GRLV-VAV-GNKLYVYDLD  115 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEET---TEEE-EEE-TTEEEEEEEE
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhhC---CEEE-Eee-cCEEEEEEcc
Confidence            356666543          289999998874     33333332 3467899887663   4433 333 5789999885


Q ss_pred             cCCCCcceeeeccccc--ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC--CeEEEEEEcccCC
Q psy2762         145 SDTNSWESRKIAAHTI--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHS  220 (318)
Q Consensus       145 ~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~--~~~~~~~~~~~h~  220 (318)
                      ...   .......+..  .+.++...                   +.+|+.|..-..+.++..+.  .+...... ....
T Consensus       116 ~~~---~l~~~~~~~~~~~i~sl~~~-------------------~~~I~vgD~~~sv~~~~~~~~~~~l~~va~-d~~~  172 (321)
T PF03178_consen  116 NSK---TLLKKAFYDSPFYITSLSVF-------------------KNYILVGDAMKSVSLLRYDEENNKLILVAR-DYQP  172 (321)
T ss_dssp             TTS---SEEEEEEE-BSSSEEEEEEE-------------------TTEEEEEESSSSEEEEEEETTTE-EEEEEE-ESS-
T ss_pred             Ccc---cchhhheecceEEEEEEecc-------------------ccEEEEEEcccCEEEEEEEccCCEEEEEEe-cCCC
Confidence            543   1222222222  23333322                   24788888888888875543  22333332 3345


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc--------ceeeEEeeecCCcEEEE---EEcCC--CC------
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--------TWTPFIMNTFDDVVWNV---SWSLT--GD------  281 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~--------~~~~~~~~~~~~~v~~v---~~spd--g~------  281 (318)
                      .+++++.|-++    +..++.+..+|.+.++......        ...........+.|.++   ...|.  +.      
T Consensus       173 ~~v~~~~~l~d----~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~  248 (321)
T PF03178_consen  173 RWVTAAEFLVD----EDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRP  248 (321)
T ss_dssp             BEEEEEEEE-S----SSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEE
T ss_pred             ccEEEEEEecC----CcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccc
Confidence            66899999875    3488899999999999876321        11111122334667777   66662  22      


Q ss_pred             EEEEEeCCCeEEE
Q psy2762         282 ILTVSCGDNSVSL  294 (318)
Q Consensus       282 ~l~s~~~D~~v~i  294 (318)
                      .++-++.+|.+-.
T Consensus       249 ~i~~~T~~G~Ig~  261 (321)
T PF03178_consen  249 QILYGTVDGSIGV  261 (321)
T ss_dssp             EEEEEETTS-EEE
T ss_pred             eEEEEecCCEEEE
Confidence            3666777887763

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG2079|consensus

Probab=94.43  E-value=0.26  Score=49.54  Aligned_cols=109  Identities=18%  Similarity=0.207  Sum_probs=68.7

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD   98 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~   98 (318)
                      ++..-.+..++.|+.-|.|-..|+...          -.....-+.-.++|++++|+  .+|.+++-|=.+|.|.+||..
T Consensus        93 ~s~a~~~~~ivi~Ts~ghvl~~d~~~n----------L~~~~~ne~v~~~Vtsvafn--~dg~~l~~G~~~G~V~v~D~~  160 (1206)
T KOG2079|consen   93 ISSAIVVVPIVIGTSHGHVLLSDMTGN----------LGPLHQNERVQGPVTSVAFN--QDGSLLLAGLGDGHVTVWDMH  160 (1206)
T ss_pred             eeeeeeeeeEEEEcCchhhhhhhhhcc----------cchhhcCCccCCcceeeEec--CCCceeccccCCCcEEEEEcc
Confidence            333334566888888888888877421          00111122236889999996  469999999999999999998


Q ss_pred             CCcEEEEEEecCCC-cCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762          99 NGNWFKYYEYNNHD-SSVNSIAWAPKEFGLILACGSSDGTISFLTY  143 (318)
Q Consensus        99 ~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~  143 (318)
                      .++........+|+ ..|-.+.+..+  +..+.++...|.  +|..
T Consensus       161 ~~k~l~~i~e~~ap~t~vi~v~~t~~--nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  161 RAKILKVITEHGAPVTGVIFVGRTSQ--NSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             CCcceeeeeecCCccceEEEEEEeCC--CcEEEEccCCCc--eEEE
Confidence            87655544433322 23444445544  446777766664  5654

>PRK02888 nitrous-oxide reductase; Validated

Probab=94.26  E-value=5.6  Score=38.53  Aligned_cols=100  Identities=8%  Similarity=0.004  Sum_probs=57.8

Q ss_pred             CCeEEEEEeecCCC-CcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE---
Q psy2762         135 DGTISFLTYMSDTN-SWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW---  210 (318)
Q Consensus       135 d~~i~i~~~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~---  210 (318)
                      ++.|.+.|.....+ .......-.=......+.++|+.                ...++++.-+++|.|.|+.+.+.   
T Consensus       295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDG----------------kylyVanklS~tVSVIDv~k~k~~~~  358 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDG----------------KYFIANGKLSPTVTVIDVRKLDDLFD  358 (635)
T ss_pred             CCEEEEEECCccccCCcceEEEEECCCCccceEECCCC----------------CEEEEeCCCCCcEEEEEChhhhhhhh
Confidence            56788888654100 01111111112234567788873                13466677799999999876321   


Q ss_pred             -------EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         211 -------IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       211 -------~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                             ....+.+--..+ ....|.++    |....|...|..|-.|++..
T Consensus       359 ~~~~~~~~vvaevevGlGP-LHTaFDg~----G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        359 GKIKPRDAVVAEPELGLGP-LHTAFDGR----GNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             ccCCccceEEEeeccCCCc-ceEEECCC----CCEEEeEeecceeEEEehHH
Confidence                   001112211222 34578775    67888999999999999876

>KOG2444|consensus

Probab=94.14  E-value=0.21  Score=41.45  Aligned_cols=68  Identities=15%  Similarity=0.097  Sum_probs=40.2

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~  103 (318)
                      +.-|+.|+.||.|.+|+.+.          .+.....+.. ......+-+..-.++.+..+++.|+.|+.|++...+..
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~----------~g~~~d~~~s-~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~  137 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNL----------EGAHSDRVCS-GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL  137 (238)
T ss_pred             CceEEeecccceEEEecCCc----------cchHHHhhhc-ccccceeccccccccceeEEeccCCceeeeccccCcee
Confidence            35577889999999998751          1111100100 11111222222234668999999999999998876543

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.02  E-value=4.5  Score=36.56  Aligned_cols=227  Identities=13%  Similarity=0.104  Sum_probs=100.7

Q ss_pred             eeeeecCCCCEEEEeeCC-CcEEEEEcCCCcCCCCCCCCcceEEEEeccccc---CeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          17 HDAEMDYLGLYLATCSSD-HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG---PVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ..+-|||||++||....| ..|+.+.+.                 .+.....   .+..+.+.  .-|.--..    =.+
T Consensus       104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~-----------------~~~~~~~~yp~~~~~~YP--k~G~~np~----v~l  160 (353)
T PF00930_consen  104 SAVWWSPDSKYLAFLRFDEREVPEYPLP-----------------DYSPPDSQYPEVESIRYP--KAGDPNPR----VSL  160 (353)
T ss_dssp             BSEEE-TTSSEEEEEEEE-TTS-EEEEE-----------------EESSSTESS-EEEEEE----BTTS---E----EEE
T ss_pred             cceEECCCCCEEEEEEECCcCCceEEee-----------------ccCCccccCCcccccccC--CCCCcCCc----eEE
Confidence            457799999999886543 344444332                 1111111   34455653  22332211    145


Q ss_pred             EEEeCCCCcEEEEEE---ecCCCcCeEEEEeeCCCCCcEEEEeecCCeE---EEEEeecCCCCcceeeec-cccccccee
Q psy2762          93 IIWRGDNGNWFKYYE---YNNHDSSVNSIAWAPKEFGLILACGSSDGTI---SFLTYMSDTNSWESRKIA-AHTIGCNAV  165 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i---~i~~~~~~~~~~~~~~~~-~h~~~v~~~  165 (318)
                      .|+|+.+++......   +..-...+..+.|.+++...++...+.+...   .++|...+.......... +.-..-...
T Consensus       161 ~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~  240 (353)
T PF00930_consen  161 FVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPP  240 (353)
T ss_dssp             EEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEE
T ss_pred             EEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeeccc
Confidence            567777665322111   1223456889999998421333344444422   233443222111010000 111111122


Q ss_pred             eeC-CCCCCCccccccCCCCCCccceEEEecCCCeEEEE--EccCCeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEE
Q psy2762         166 SWG-PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIAS  241 (318)
Q Consensus       166 ~~~-p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw--d~~~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s  241 (318)
                      .|. ++.                ..+|.....||--+|+  +..++..   ..+....-.|+. +.|+++   .+....+
T Consensus       241 ~~~~~~~----------------~~~l~~s~~~G~~hly~~~~~~~~~---~~lT~G~~~V~~i~~~d~~---~~~iyf~  298 (353)
T PF00930_consen  241 HFLGPDG----------------NEFLWISERDGYRHLYLYDLDGGKP---RQLTSGDWEVTSILGWDED---NNRIYFT  298 (353)
T ss_dssp             EE-TTTS----------------SEEEEEEETTSSEEEEEEETTSSEE---EESS-SSS-EEEEEEEECT---SSEEEEE
T ss_pred             ccccCCC----------------CEEEEEEEcCCCcEEEEEcccccce---eccccCceeecccceEcCC---CCEEEEE
Confidence            222 221                2344444577765555  5555442   234445555755 677776   3445555


Q ss_pred             EeCC--CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         242 CSQD--RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       242 ~s~D--~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      +..+  ..-.||.+.-.....+..+......-.+++|||+|++++-.+.
T Consensus       299 a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  299 ANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             ESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred             ecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence            5543  2344554433201123344322222269999999999876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=93.98  E-value=3.6  Score=35.24  Aligned_cols=189  Identities=12%  Similarity=0.159  Sum_probs=94.1

Q ss_pred             CCCcceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .|=...+..+.|+|+...|++ ....+.|...+.            .|++++.+.-. -+-...|.+..  ++.++++.-
T Consensus        18 ~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~------------~G~vlr~i~l~g~~D~EgI~y~g--~~~~vl~~E   83 (248)
T PF06977_consen   18 PGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL------------DGKVLRRIPLDGFGDYEGITYLG--NGRYVLSEE   83 (248)
T ss_dssp             TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET------------T--EEEEEE-SS-SSEEEEEE-S--TTEEEEEET
T ss_pred             CCccCCccccEEcCCCCeEEEEECCCCEEEEEcC------------CCCEEEEEeCCCCCCceeEEEEC--CCEEEEEEc
Confidence            455667999999998665554 555555544443            35667666533 35567888853  355555444


Q ss_pred             CCCeEEEEeCCCCc----E--EEEEEec---CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec--CCCCcceeeec
Q psy2762          88 YDRKVIIWRGDNGN----W--FKYYEYN---NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS--DTNSWESRKIA  156 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~----~--~~~~~~~---~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~--~~~~~~~~~~~  156 (318)
                      .++.+.+.++....    .  ...+.+.   .++..+..|+|.|.. +.+++ +-...-..++.+..  ...........
T Consensus        84 r~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~-~~L~v-~kE~~P~~l~~~~~~~~~~~~~~~~~~  161 (248)
T PF06977_consen   84 RDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKT-NRLFV-AKERKPKRLYEVNGFPGGFDLFVSDDQ  161 (248)
T ss_dssp             TTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTT-TEEEE-EEESSSEEEEEEESTT-SS--EEEE-H
T ss_pred             CCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCC-CEEEE-EeCCCChhhEEEccccCccceeecccc
Confidence            48888888873211    1  1222222   234558999999974 34444 44555566666543  11111111111


Q ss_pred             ------ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc--C-----CCCe
Q psy2762         157 ------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN--H-----SDWV  223 (318)
Q Consensus       157 ------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~--h-----~~~V  223 (318)
                            ........++++|..                ++.++.+.++..|-++|.+. +......+..  |     -..-
T Consensus       162 ~~~~~~~~~~d~S~l~~~p~t----------------~~lliLS~es~~l~~~d~~G-~~~~~~~L~~g~~gl~~~~~Qp  224 (248)
T PF06977_consen  162 DLDDDKLFVRDLSGLSYDPRT----------------GHLLILSDESRLLLELDRQG-RVVSSLSLDRGFHGLSKDIPQP  224 (248)
T ss_dssp             HHH-HT--SS---EEEEETTT----------------TEEEEEETTTTEEEEE-TT---EEEEEE-STTGGG-SS---SE
T ss_pred             ccccccceeccccceEEcCCC----------------CeEEEEECCCCeEEEECCCC-CEEEEEEeCCcccCcccccCCc
Confidence                  122335667777642                56788899999999999654 3334444433  1     1235


Q ss_pred             eEEEEccC
Q psy2762         224 RDVAWAPS  231 (318)
Q Consensus       224 ~~v~~sp~  231 (318)
                      -.|+|.|+
T Consensus       225 EGIa~d~~  232 (248)
T PF06977_consen  225 EGIAFDPD  232 (248)
T ss_dssp             EEEEE-TT
T ss_pred             cEEEECCC
Confidence            67889885

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG4649|consensus

Probab=93.96  E-value=3.6  Score=35.17  Aligned_cols=25  Identities=20%  Similarity=0.210  Sum_probs=21.0

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcC
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLD   43 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~   43 (318)
                      ....+++.+|..|+.|++...-|..
T Consensus        99 a~~d~~~glIycgshd~~~yalD~~  123 (354)
T KOG4649|consen   99 AQCDFDGGLIYCGSHDGNFYALDPK  123 (354)
T ss_pred             eEEcCCCceEEEecCCCcEEEeccc
Confidence            4467889999999999999888865

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=93.84  E-value=4.6  Score=39.27  Aligned_cols=90  Identities=19%  Similarity=0.318  Sum_probs=54.6

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE-----eecCCCCcc-ee
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT-----YMSDTNSWE-SR  153 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~-----~~~~~~~~~-~~  153 (318)
                      ++..+.-+.-.++.|||...+.......+ ...+.|.+++|...+.+..+.+.+..+.|.++.     +......|. ++
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~  119 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR  119 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence            33333333345789999987753333333 346789999999777688888889999998863     222222222 22


Q ss_pred             e--ecccc-cccceeeeCCC
Q psy2762         154 K--IAAHT-IGCNAVSWGPG  170 (318)
Q Consensus       154 ~--~~~h~-~~v~~~~~~p~  170 (318)
                      +  +..|+ .+|.+..|.++
T Consensus       120 ~i~i~~~T~h~Igds~Wl~~  139 (631)
T PF12234_consen  120 KIDISSHTPHPIGDSIWLKD  139 (631)
T ss_pred             EEEeecCCCCCccceeEecC
Confidence            2  22344 35667777775

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=93.71  E-value=4.2  Score=35.09  Aligned_cols=234  Identities=15%  Similarity=0.088  Sum_probs=117.8

Q ss_pred             cCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc
Q psy2762          22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN  101 (318)
Q Consensus        22 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~  101 (318)
                      ...++.|+.|..+| |.+++....          .......  +...|..+...+. .+.+|+-+  |+.+.++++..-.
T Consensus         4 ~~~~~~L~vGt~~G-l~~~~~~~~----------~~~~~i~--~~~~I~ql~vl~~-~~~llvLs--d~~l~~~~L~~l~   67 (275)
T PF00780_consen    4 DSWGDRLLVGTEDG-LYVYDLSDP----------SKPTRIL--KLSSITQLSVLPE-LNLLLVLS--DGQLYVYDLDSLE   67 (275)
T ss_pred             ccCCCEEEEEECCC-EEEEEecCC----------ccceeEe--ecceEEEEEEecc-cCEEEEEc--CCccEEEEchhhc
Confidence            34678888898888 888887311          1122222  2223888887643 34444333  5999999975422


Q ss_pred             EEEE-------------EEecCCCcCeEEEE-eeCCCCCcEEEEeecCCeEEEEEeecCCCCc--ceeeeccccccccee
Q psy2762         102 WFKY-------------YEYNNHDSSVNSIA-WAPKEFGLILACGSSDGTISFLTYMSDTNSW--ESRKIAAHTIGCNAV  165 (318)
Q Consensus       102 ~~~~-------------~~~~~h~~~v~~v~-~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~--~~~~~~~h~~~v~~~  165 (318)
                      ....             ..+. ....+..++ -........+ +....+.|.+|.+.......  ..+++ .-...+..+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~f~~~~~~~~~~~L-~va~kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i  144 (275)
T PF00780_consen   68 PVSTSAPLAFPKSRSLPTKLP-ETKGVSFFAVNGGHEGSRRL-CVAVKKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSI  144 (275)
T ss_pred             ccccccccccccccccccccc-ccCCeeEEeeccccccceEE-EEEECCEEEEEEEECCcccccceeEEE-EcCCCcEEE
Confidence            1110             0111 122344444 1122223334 44455688888876543222  22222 223456677


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----------CCCeeEEEEccCCCCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----------SDWVRDVAWAPSWGLS  235 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----------~~~V~~v~~sp~~~~~  235 (318)
                      .|.+                   ..|+.|..+ ...+.|+.++...+.......          ..++..+....     
T Consensus       145 ~~~~-------------------~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  199 (275)
T PF00780_consen  145 AFLG-------------------NKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSD-----  199 (275)
T ss_pred             EEeC-------------------CEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCC-----
Confidence            7764                   246666554 367778776543333221111          12233333322     


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      +.+|++  .|..-.+-+..+..... . .-.-...+.++++.  ..+|..-+. +.|.||++..+...+++
T Consensus       200 ~e~Ll~--~~~~g~fv~~~G~~~r~-~-~i~W~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i  263 (275)
T PF00780_consen  200 NEFLLC--YDNIGVFVNKNGEPSRK-S-TIQWSSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTI  263 (275)
T ss_pred             ceEEEE--ecceEEEEcCCCCcCcc-c-EEEcCCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEE
Confidence            345543  34444444554432210 1 11223455567774  568876654 66999999888554444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2079|consensus

Probab=93.35  E-value=0.2  Score=50.21  Aligned_cols=71  Identities=15%  Similarity=0.324  Sum_probs=51.1

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC-CCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH-PQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~-~~~~~~las~s~Dg~   91 (318)
                      +++|++++|+.+|+.++.|=.+|.|.+||+.           .+++++.+..|..+++++-+.- ..++..+.++...|.
T Consensus       130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~-----------~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMH-----------RAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             CCcceeeEecCCCceeccccCCCcEEEEEcc-----------CCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence            6799999999999999999999999999996           3456777776766655543310 123456777665554


Q ss_pred             EEEEe
Q psy2762          92 VIIWR   96 (318)
Q Consensus        92 v~vWd   96 (318)
                        +|.
T Consensus       199 --f~~  201 (1206)
T KOG2079|consen  199 --FWK  201 (1206)
T ss_pred             --eEE
Confidence              564

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=93.24  E-value=6.5  Score=36.19  Aligned_cols=65  Identities=12%  Similarity=0.157  Sum_probs=43.7

Q ss_pred             eEEEecCCCeEEEEEccCCeEEEEEEccc------CCCCeeEEEEccC---C-CCCccEEEEEeCCCeEEEEEcC
Q psy2762         190 RLVSGGCDNLIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPS---W-GLSKCMIASCSQDRKVIIWTSN  254 (318)
Q Consensus       190 ~lasgs~d~~i~iwd~~~~~~~~~~~~~~------h~~~V~~v~~sp~---~-~~~~~~l~s~s~D~~i~vw~~~  254 (318)
                      ++|.|.++|.+-|.|+++...+....+..      ....|+++.|+.-   . .+..=.|..|...|.+.+|.+-
T Consensus        99 Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIl  173 (395)
T PF08596_consen   99 FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKIL  173 (395)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEe
Confidence            79999999999999998765443334433      3456888988841   1 1123467778888999999764

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2395|consensus

Probab=92.93  E-value=2.1  Score=40.08  Aligned_cols=148  Identities=12%  Similarity=0.163  Sum_probs=83.5

Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcE-----EEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLI-----LACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~-----lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      -+|.++..-..+.--|++.++.+..+++.  .. |+-+.+.|+.....     -..|-.|..|.-||++-.... .+...
T Consensus       347 lil~~~~~~~~l~klDIE~GKIVeEWk~~--~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~~~  422 (644)
T KOG2395|consen  347 LILMDGGEQDKLYKLDIERGKIVEEWKFE--DD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLAVV  422 (644)
T ss_pred             eEeeCCCCcCcceeeecccceeeeEeecc--CC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eeeee
Confidence            34555555566777788888877777653  23 77788888753211     224555666666776533221 11111


Q ss_pred             cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      .+|... ..-.|+.       +     .... .-+||.||.+|.||+||.....  ...-+++-.++|..|.-+.+    
T Consensus       423 q~kqy~-~k~nFsc-------~-----aTT~-sG~IvvgS~~GdIRLYdri~~~--AKTAlPgLG~~I~hVdvtad----  482 (644)
T KOG2395|consen  423 QSKQYS-TKNNFSC-------F-----ATTE-SGYIVVGSLKGDIRLYDRIGRR--AKTALPGLGDAIKHVDVTAD----  482 (644)
T ss_pred             eccccc-cccccce-------e-----eecC-CceEEEeecCCcEEeehhhhhh--hhhcccccCCceeeEEeecc----
Confidence            122210 0000100       0     0011 2389999999999999964321  23347888899999988875    


Q ss_pred             ccEEEEEeCCCeEEEEEc
Q psy2762         236 KCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~  253 (318)
                      |..|+.. .+.++.|-++
T Consensus       483 GKwil~T-c~tyLlLi~t  499 (644)
T KOG2395|consen  483 GKWILAT-CKTYLLLIDT  499 (644)
T ss_pred             CcEEEEe-cccEEEEEEE
Confidence            6555433 3566666553

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=91.74  E-value=11  Score=34.95  Aligned_cols=47  Identities=15%  Similarity=0.373  Sum_probs=34.3

Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY  143 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~  143 (318)
                      .|+||+... .......++.  +.+-++.|+.+  + .|++-..||.++++++
T Consensus        62 ~I~iys~sG-~ll~~i~w~~--~~iv~~~wt~~--e-~LvvV~~dG~v~vy~~  108 (410)
T PF04841_consen   62 SIQIYSSSG-KLLSSIPWDS--GRIVGMGWTDD--E-ELVVVQSDGTVRVYDL  108 (410)
T ss_pred             EEEEECCCC-CEeEEEEECC--CCEEEEEECCC--C-eEEEEEcCCEEEEEeC
Confidence            599998764 4444444544  78999999986  3 3556678999999986

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.01  E-value=9.9  Score=33.07  Aligned_cols=171  Identities=13%  Similarity=0.210  Sum_probs=79.8

Q ss_pred             EeeCCCCCcEEEEeecC-----CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcccc--ccCCC-CCCccce
Q psy2762         119 AWAPKEFGLILACGSSD-----GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD--LKGSK-LGGVAKR  190 (318)
Q Consensus       119 ~~~p~~~~~~lasgs~d-----~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~--~~~~~-~~~~~~~  190 (318)
                      .|+|+  +.+|.+.-.|     |.|-+||.+..-.  .+-++..|..+.-.+.|.++...+-...  ++..+ ++-  ..
T Consensus       120 vfs~d--G~~LYATEndfd~~rGViGvYd~r~~fq--rvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR--~~  193 (366)
T COG3490         120 VFSPD--GRLLYATENDFDPNRGVIGVYDAREGFQ--RVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGR--TE  193 (366)
T ss_pred             ccCCC--CcEEEeecCCCCCCCceEEEEecccccc--eecccccCCcCcceeEEecCCcEEEEeCCceecccccCc--cc
Confidence            58898  5555444333     5788999864321  2344556776767777877642111000  00000 000  00


Q ss_pred             EEEecCCCeEEEEEccCCeEEEEEEcc--cCCCCeeEEEEccCCCCCccEEEEEeCCCe-------EEEEEcCCCcceee
Q psy2762         191 LVSGGCDNLIKIWKQEGDKWIEETKLE--NHSDWVRDVAWAPSWGLSKCMIASCSQDRK-------VIIWTSNDYVTWTP  261 (318)
Q Consensus       191 lasgs~d~~i~iwd~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~-------i~vw~~~~~~~~~~  261 (318)
                      |=.-+..-.+-+.|..+++.++.+++.  .+.-.|+.+...++    |+.+.-+-..|.       |-.....  ...+.
T Consensus       194 lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~d----gtvwfgcQy~G~~~d~ppLvg~~~~g--~~l~~  267 (366)
T COG3490         194 LNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRD----GTVWFGCQYRGPRNDLPPLVGHFRKG--EPLEF  267 (366)
T ss_pred             cchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCC----CcEEEEEEeeCCCccCCcceeeccCC--CcCcc
Confidence            111122223334444444444444554  34445666666553    443332221111       0000000  00000


Q ss_pred             E-----EeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCC
Q psy2762         262 F-----IMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDG  301 (318)
Q Consensus       262 ~-----~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~  301 (318)
                      .     ....+...|-+++.+.+..+++.++ ..+..-|||..++.
T Consensus       268 ~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~  313 (366)
T COG3490         268 LDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGA  313 (366)
T ss_pred             cCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCc
Confidence            0     0112235688999987666665555 56788899987764

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=90.95  E-value=11  Score=33.37  Aligned_cols=156  Identities=17%  Similarity=0.328  Sum_probs=72.4

Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM  144 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~  144 (318)
                      -.+.+..+..+  .+|.+++.++......-||.....+.+...  .-...|..+.|.|+  +.+... ...|.|++=+..
T Consensus       143 ~~gs~~~~~r~--~dG~~vavs~~G~~~~s~~~G~~~w~~~~r--~~~~riq~~gf~~~--~~lw~~-~~Gg~~~~s~~~  215 (302)
T PF14870_consen  143 TSGSINDITRS--SDGRYVAVSSRGNFYSSWDPGQTTWQPHNR--NSSRRIQSMGFSPD--GNLWML-ARGGQIQFSDDP  215 (302)
T ss_dssp             ----EEEEEE---TTS-EEEEETTSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TT--S-EEEE-ETTTEEEEEE-T
T ss_pred             CcceeEeEEEC--CCCcEEEEECcccEEEEecCCCccceEEcc--CccceehhceecCC--CCEEEE-eCCcEEEEccCC
Confidence            34567776654  368888888777777899866555555433  23578999999998  444443 478888765411


Q ss_pred             cCCCCcceee--ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCC
Q psy2762         145 SDTNSWESRK--IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSD  221 (318)
Q Consensus       145 ~~~~~~~~~~--~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~  221 (318)
                      .....|....  +..-..++..++|.+.                 ....|+|+. |++.. -.+.+ .+........-..
T Consensus       216 ~~~~~w~~~~~~~~~~~~~~ld~a~~~~-----------------~~~wa~gg~-G~l~~-S~DgGktW~~~~~~~~~~~  276 (302)
T PF14870_consen  216 DDGETWSEPIIPIKTNGYGILDLAYRPP-----------------NEIWAVGGS-GTLLV-STDGGKTWQKDRVGENVPS  276 (302)
T ss_dssp             TEEEEE---B-TTSS--S-EEEEEESSS-----------------S-EEEEEST-T-EEE-ESSTTSS-EE-GGGTTSSS
T ss_pred             CCccccccccCCcccCceeeEEEEecCC-----------------CCEEEEeCC-ccEEE-eCCCCccceECccccCCCC
Confidence            1111122111  1112234567788765                 234555544 44332 22322 4543333333445


Q ss_pred             CeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       222 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                      ..+.|.|.+.    ..-+ ..+.||.|.-|
T Consensus       277 n~~~i~f~~~----~~gf-~lG~~G~ll~~  301 (302)
T PF14870_consen  277 NLYRIVFVNP----DKGF-VLGQDGVLLRY  301 (302)
T ss_dssp             ---EEEEEET----TEEE-EE-STTEEEEE
T ss_pred             ceEEEEEcCC----CceE-EECCCcEEEEe
Confidence            5788888763    2333 35678877655

>PRK02888 nitrous-oxide reductase; Validated

Probab=90.73  E-value=17  Score=35.34  Aligned_cols=95  Identities=9%  Similarity=0.030  Sum_probs=62.2

Q ss_pred             CCeEEEEEccC----C-eEEEEEEcccCCCCeeEEEEccCCCCCccE-EEEEeCCCeEEEEEcCCCccee----------
Q psy2762         197 DNLIKIWKQEG----D-KWIEETKLENHSDWVRDVAWAPSWGLSKCM-IASCSQDRKVIIWTSNDYVTWT----------  260 (318)
Q Consensus       197 d~~i~iwd~~~----~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~-l~s~s~D~~i~vw~~~~~~~~~----------  260 (318)
                      ++.|.+.|..+    + +.  ...+. -......|.++|+    |.+ ++++..+.+|.|.|+.+...+-          
T Consensus       295 gn~V~VID~~t~~~~~~~v--~~yIP-VGKsPHGV~vSPD----GkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~v  367 (635)
T PRK02888        295 GSKVPVVDGRKAANAGSAL--TRYVP-VPKNPHGVNTSPD----GKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAV  367 (635)
T ss_pred             CCEEEEEECCccccCCcce--EEEEE-CCCCccceEECCC----CCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceE
Confidence            67899999876    2 22  22222 2223578999997    554 5555569999999988743110          


Q ss_pred             eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       261 ~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ..+.. ....-...+|.++|+...|---|..|-.|++..
T Consensus       368 vaeve-vGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        368 VAEPE-LGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             EEeec-cCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            01111 122345789999999887777899999999755

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.64  E-value=11  Score=32.85  Aligned_cols=56  Identities=16%  Similarity=0.138  Sum_probs=39.1

Q ss_pred             eecCCCCEEEEeeCC-----CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          20 EMDYLGLYLATCSSD-----HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        20 ~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .|||||.+|...-.|     |.|-|||....          ...+..+..|.=.--.+.|..  ||..|+.+.
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~----------fqrvgE~~t~GiGpHev~lm~--DGrtlvvan  180 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREG----------FQRVGEFSTHGIGPHEVTLMA--DGRTLVVAN  180 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccc----------cceecccccCCcCcceeEEec--CCcEEEEeC
Confidence            589999999875433     67899998632          345667777765555677753  588887764

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=89.86  E-value=16  Score=36.44  Aligned_cols=39  Identities=21%  Similarity=0.282  Sum_probs=30.6

Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                      .+...|..+.|+|.. ..+.+|+.-..|+++|+||+....
T Consensus       144 ~~~~~i~qv~WhP~s-~~~~~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  144 NSSLEIKQVRWHPWS-ESDSHLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             CCCceEEEEEEcCCC-CCCCeEEEEecCCEEEEEecCCCC
Confidence            345568999999963 346788888899999999987643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=89.85  E-value=16  Score=34.26  Aligned_cols=102  Identities=12%  Similarity=0.056  Sum_probs=52.2

Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcc-----cCCCCeeEEEEccCC---CCCccEEEEEeC---------CCeEEE
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLE-----NHSDWVRDVAWAPSW---GLSKCMIASCSQ---------DRKVII  250 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-----~h~~~V~~v~~sp~~---~~~~~~l~s~s~---------D~~i~v  250 (318)
                      +..|++--..|.|++++..++.......+.     .-..-...|+++|++   ..++.+.++-+.         ...|.-
T Consensus        41 G~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~~~~~~~~I~R  120 (454)
T TIGR03606        41 NQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDKELPNHTKIVR  120 (454)
T ss_pred             CeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCCCccCCcEEEE
Confidence            455665554689999876544222222121     123457899999997   444444444322         233444


Q ss_pred             EEcCCCc---ceeeEEeeec----CCcEEEEEEcCCCCEEEEEeCC
Q psy2762         251 WTSNDYV---TWTPFIMNTF----DDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       251 w~~~~~~---~~~~~~~~~~----~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      |.+....   .....++...    ...-..+.|.|||+++++.++.
T Consensus       121 ~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       121 YTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             EEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence            5443210   0001111111    1123478899999988777654

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=89.74  E-value=16  Score=33.75  Aligned_cols=104  Identities=17%  Similarity=0.213  Sum_probs=55.8

Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-----------CeEEEEEcCCCcceeeEEeee
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-----------RKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----------~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      ..|+++|+.+++.... .+....  -..+.|.++    ++.|.-...|           ..|+.|.+.+....-......
T Consensus       150 ~~l~v~Dl~tg~~l~d-~i~~~~--~~~~~W~~d----~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~  222 (414)
T PF02897_consen  150 YTLRVFDLETGKFLPD-GIENPK--FSSVSWSDD----GKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEE  222 (414)
T ss_dssp             EEEEEEETTTTEEEEE-EEEEEE--SEEEEECTT----SSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-
T ss_pred             EEEEEEECCCCcCcCC-cccccc--cceEEEeCC----CCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEee
Confidence            3699999999865432 222221  123999996    4444434332           237788877654321122222


Q ss_pred             cC-Cc-EEEEEEcCCCCEEEEEeC-CC---eEEEEEECCC----CceEEEee
Q psy2762         267 FD-DV-VWNVSWSLTGDILTVSCG-DN---SVSLWKENTD----GAWQCITE  308 (318)
Q Consensus       267 ~~-~~-v~~v~~spdg~~l~s~~~-D~---~v~iW~~~~~----~~~~~~~~  308 (318)
                      .. .. ...+..++||++|+..+. ..   .+.+-+...+    ..|.++..
T Consensus       223 ~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~  274 (414)
T PF02897_consen  223 PDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSP  274 (414)
T ss_dssp             TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEE
T ss_pred             cCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeC
Confidence            22 22 678999999999775433 22   3455554442    35776654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=89.69  E-value=23  Score=35.14  Aligned_cols=166  Identities=10%  Similarity=0.080  Sum_probs=91.0

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCC--------CCC----cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDS--------HSQ----KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~--------~~~----~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .++|+.+. .+.|.||+..........        .+.    ......+.. -.-.|+.+....-.....|+.|..||.|
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p-~PHtIN~i~v~~lg~~EVLl~c~DdG~V  126 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWP-FPHTINFIKVGDLGGEEVLLLCTDDGDV  126 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCC-CCceeeEEEecccCCeeEEEEEecCCeE
Confidence            66777654 789999998632221100        000    000011111 1223555543222345789999999999


Q ss_pred             EEEeCCC-------C----c-------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          93 IIWRGDN-------G----N-------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        93 ~vWd~~~-------~----~-------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      .+|..+.       .    +       ..+.+.+. -...+.+++++......++|+++....|.++-+...........
T Consensus       127 ~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~  205 (717)
T PF08728_consen  127 LAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVP  205 (717)
T ss_pred             EEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccc
Confidence            9995421       0    0       01122232 34578999998222257888888888898886654321111111


Q ss_pred             ecccccccceeeeCCCCCCCccccccCCCCCCcc-ceEEEecCCCeEEEEEc
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVA-KRLVSGGCDNLIKIWKQ  205 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~-~~lasgs~d~~i~iwd~  205 (318)
                      ...|...|.+++|-++..            ...| ..+++++=.|.+-+|++
T Consensus       206 s~~~~hNIP~VSFl~~~~------------d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  206 SHQHSHNIPNVSFLDDDL------------DPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccccCCCeeEeecCCC------------CCccceEEEEEeccCcEEEEEE
Confidence            112445677888877521            0112 26888888998888776

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=89.67  E-value=10  Score=32.58  Aligned_cols=119  Identities=10%  Similarity=0.105  Sum_probs=68.4

Q ss_pred             cceEEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE---E
Q psy2762         188 AKRLVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF---I  263 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---~  263 (318)
                      ++.|+.|.++| |.+++.+ ...+...    .+...|..+...|+.   + .|+.- .|+.+.++++.........   .
T Consensus         7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i----~~~~~I~ql~vl~~~---~-~llvL-sd~~l~~~~L~~l~~~~~~~~~~   76 (275)
T PF00780_consen    7 GDRLLVGTEDG-LYVYDLSDPSKPTRI----LKLSSITQLSVLPEL---N-LLLVL-SDGQLYVYDLDSLEPVSTSAPLA   76 (275)
T ss_pred             CCEEEEEECCC-EEEEEecCCccceeE----eecceEEEEEEeccc---C-EEEEE-cCCccEEEEchhhcccccccccc
Confidence            35789998888 8998883 2222222    122339999999862   3 34433 3599999997764321100   0


Q ss_pred             ---------eeecCCcEEEEE---EcCCCCEEEEEeCCCeEEEEEECCC-Cce-EEEeeecccccccc
Q psy2762         264 ---------MNTFDDVVWNVS---WSLTGDILTVSCGDNSVSLWKENTD-GAW-QCITEMGKTSEQRA  317 (318)
Q Consensus       264 ---------~~~~~~~v~~v~---~spdg~~l~s~~~D~~v~iW~~~~~-~~~-~~~~~~~~~~~~~~  317 (318)
                               .......+..++   -...+..|+.+ ..+.+.||..... +.+ ...+|+.....+..
T Consensus        77 ~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~  143 (275)
T PF00780_consen   77 FPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEISLPDPPSS  143 (275)
T ss_pred             ccccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEEcCCCcEE
Confidence                     001122344444   12234455544 4569999987775 456 78888776655543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=89.56  E-value=13  Score=31.98  Aligned_cols=149  Identities=14%  Similarity=0.106  Sum_probs=76.0

Q ss_pred             CeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         114 SVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       114 ~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      .+.+.++++++  ..+|... .++.-.+|-...+..   ...+. -......-+|+++                 +...+
T Consensus        25 ~~~s~AvS~dg--~~~A~v~~~~~~~~L~~~~~~~~---~~~~~-~g~~l~~PS~d~~-----------------g~~W~   81 (253)
T PF10647_consen   25 DVTSPAVSPDG--SRVAAVSEGDGGRSLYVGPAGGP---VRPVL-TGGSLTRPSWDPD-----------------GWVWT   81 (253)
T ss_pred             cccceEECCCC--CeEEEEEEcCCCCEEEEEcCCCc---ceeec-cCCccccccccCC-----------------CCEEE
Confidence            57889999984  4444444 222223333322221   11111 1114455567765                 23444


Q ss_pred             EecCCCeEEEEE-ccCCeEEEE-EEcccCCCCeeEEEEccCCCCCccEEEEEe---CCCeEEEEEcCCCccee------e
Q psy2762         193 SGGCDNLIKIWK-QEGDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCS---QDRKVIIWTSNDYVTWT------P  261 (318)
Q Consensus       193 sgs~d~~i~iwd-~~~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s---~D~~i~vw~~~~~~~~~------~  261 (318)
                      ....+...+++. ...+...+. .....-...|..+.+||+    |..+|...   .++.|.|--+.......      +
T Consensus        82 v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpD----G~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~  157 (253)
T PF10647_consen   82 VDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPD----GTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGP  157 (253)
T ss_pred             EEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCC----CcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccc
Confidence            445555666663 222221111 111111127999999997    66665555   35666666443222110      1


Q ss_pred             -EEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         262 -FIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       262 -~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                       .........+.+++|.+++.+++.+...
T Consensus       158 ~~~~~~~~~~v~~v~W~~~~~L~V~~~~~  186 (253)
T PF10647_consen  158 RRVAPPLLSDVTDVAWSDDSTLVVLGRSA  186 (253)
T ss_pred             eEecccccCcceeeeecCCCEEEEEeCCC
Confidence             1112234578999999999887766543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=89.49  E-value=1.4  Score=26.35  Aligned_cols=33  Identities=21%  Similarity=0.227  Sum_probs=25.8

Q ss_pred             CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       222 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      .|+++.|||+... ..+|+-+-.-+.|.|+|+..
T Consensus         2 AvR~~kFsP~~~~-~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGG-NDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCc-ccEEEEEccCCeEEEEEccc
Confidence            5899999986221 26888888889999999874

It contains a characteristic DLL sequence motif.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=89.16  E-value=1.2  Score=26.69  Aligned_cols=30  Identities=10%  Similarity=0.032  Sum_probs=24.9

Q ss_pred             ceeeeeeecCCC---CEEEEeeCCCcEEEEEcC
Q psy2762          14 DMIHDAEMDYLG---LYLATCSSDHTVKVFNLD   43 (318)
Q Consensus        14 ~~v~~~~~~~~g---~~l~s~s~D~~v~vwd~~   43 (318)
                      +.|++++|+|..   .+|+-.-.-+.|.|+|+.
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R   33 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR   33 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence            468999999754   588888888999999985

It contains a characteristic DLL sequence motif.

>KOG4649|consensus

Probab=88.88  E-value=14  Score=31.69  Aligned_cols=62  Identities=13%  Similarity=0.035  Sum_probs=42.6

Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                      +++++.|-..|.+++.+..+++.....+..+-   |.+ -...+    ++..|..++.|++...-|....
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~---vk~~a~~d~----~~glIycgshd~~~yalD~~~~  125 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILET---VKVRAQCDF----DGGLIYCGSHDGNFYALDPKTY  125 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhh---hccceEEcC----CCceEEEecCCCcEEEeccccc
Confidence            35789999999999999998854444332221   211 11223    4778999999999988877654

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=88.83  E-value=14  Score=33.12  Aligned_cols=100  Identities=10%  Similarity=0.094  Sum_probs=50.4

Q ss_pred             ceEEEecCCCeEEEEEccCCeE-EEEEEc----ccCCCCeeEEEEccCCCCCccEEEEEeCC--------CeEEEEEcCC
Q psy2762         189 KRLVSGGCDNLIKIWKQEGDKW-IEETKL----ENHSDWVRDVAWAPSWGLSKCMIASCSQD--------RKVIIWTSND  255 (318)
Q Consensus       189 ~~lasgs~d~~i~iwd~~~~~~-~~~~~~----~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--------~~i~vw~~~~  255 (318)
                      ..|+ +...|.|++++.. +.. .....+    .....-...++++|++..++.+.+..+..        ..|.-|....
T Consensus        14 ~l~v-~e~~G~i~~~~~~-g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~v~r~~~~~   91 (331)
T PF07995_consen   14 RLLV-AERSGRIWVVDKD-GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNRVVRFTLSD   91 (331)
T ss_dssp             CEEE-EETTTEEEEEETT-TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEEEEEEEEET
T ss_pred             cEEE-EeCCceEEEEeCC-CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcceeeEEEeccC
Confidence            4444 5568999999833 332 112222    22334578999999876556655555532        2333344433


Q ss_pred             Cc-c-eeeE----Eeee---cCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         256 YV-T-WTPF----IMNT---FDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       256 ~~-~-~~~~----~~~~---~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      .. . ....    .+..   ....-..++|.|||.+.++.+..+
T Consensus        92 ~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   92 GDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             TSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             CccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence            21 0 0011    1111   124567899999998877776543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=87.65  E-value=21  Score=34.24  Aligned_cols=119  Identities=14%  Similarity=0.277  Sum_probs=65.4

Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-----CeEEEEEEccc-CCCCe--eEEEEccC
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-----DKWIEETKLEN-HSDWV--RDVAWAPS  231 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-----~~~~~~~~~~~-h~~~V--~~v~~sp~  231 (318)
                      ..|..++|+|-...            +...+|| ....+.|.||.+..     +++...++.+- -..+|  ..+-|+|.
T Consensus        57 EhV~GlsW~P~~~~------------~~paLLA-VQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk  123 (671)
T PF15390_consen   57 EHVHGLSWAPPCTA------------DTPALLA-VQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPK  123 (671)
T ss_pred             ceeeeeeecCcccC------------CCCceEE-EeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCC
Confidence            45788999985211            0012344 45567899998652     23222222111 11122  35789996


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-CeEEEEE
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-NSVSLWK  296 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-~~v~iW~  296 (318)
                          ...|+.-..+..--+.++.....+....+ .-.+.|....|.+||+.|+.+-+. =.-.|||
T Consensus       124 ----~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd  184 (671)
T PF15390_consen  124 ----KAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD  184 (671)
T ss_pred             ----CceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence                44555444444334555544332221222 335689999999999998877543 2456888

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=87.48  E-value=21  Score=32.01  Aligned_cols=43  Identities=12%  Similarity=0.153  Sum_probs=22.3

Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ..|.+||+.+.+|...-.+......-.+++.. +  +++++.|+.+
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~-~--~~iyv~GG~~  210 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHK-G--NKLLLINGEI  210 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceEEEE-C--CEEEEEeeee
Confidence            46888998887776543332111111222222 2  4667777653

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=87.19  E-value=25  Score=32.63  Aligned_cols=153  Identities=14%  Similarity=0.131  Sum_probs=80.6

Q ss_pred             CCcEEEEEECCCeEEEEeCCCCcEE---EEEEecCCCcCeEEEEeeC---CCCCcEEEEeecCCeEEEEEeecCCCC---
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGNWF---KYYEYNNHDSSVNSIAWAP---KEFGLILACGSSDGTISFLTYMSDTNS---  149 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~~~---~~~~~~~h~~~v~~v~~~p---~~~~~~lasgs~d~~i~i~~~~~~~~~---  149 (318)
                      ....++.||..|.++|+++..+...   ...+. .-..+|..|+.-+   ......|| .-.-..+.+|.+......   
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~-~l~~PILqv~~G~F~s~~~~~~La-VLhP~kl~vY~v~~~~g~~~~  113 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLET-QLKDPILQVECGKFVSGSEDLQLA-VLHPRKLSVYSVSLVDGTVEH  113 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEE-ecCCcEEEEEeccccCCCCcceEE-EecCCEEEEEEEEecCCCccc
Confidence            4578999999999999998654311   11111 1346777776542   21122333 344556666665322211   


Q ss_pred             ---cceeeecccccccce--eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCee
Q psy2762         150 ---WESRKIAAHTIGCNA--VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVR  224 (318)
Q Consensus       150 ---~~~~~~~~h~~~v~~--~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~  224 (318)
                         ..+..+..|.-.-..  ....|..+.          . . ..+|+.-|-||++.+|+-+.--+  ...+.+ .--.-
T Consensus       114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~----------~-~-~~~IcVQS~DG~L~~feqe~~~f--~~~lp~-~llPg  178 (418)
T PF14727_consen  114 GNQYQLELIYEHSLQRTAYNMCCGPFGGV----------K-G-RDFICVQSMDGSLSFFEQESFAF--SRFLPD-FLLPG  178 (418)
T ss_pred             CcEEEEEEEEEEecccceeEEEEEECCCC----------C-C-ceEEEEEecCceEEEEeCCcEEE--EEEcCC-CCCCc
Confidence               222222234332222  222232110          0 0 24789999999999998654221  222332 11123


Q ss_pred             EEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         225 DVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       225 ~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      .++|.|.    ...|++++.+..+.-|.
T Consensus       179 Pl~Y~~~----tDsfvt~sss~~l~~Yk  202 (418)
T PF14727_consen  179 PLCYCPR----TDSFVTASSSWTLECYK  202 (418)
T ss_pred             CeEEeec----CCEEEEecCceeEEEec
Confidence            4677774    45677888787777774

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=87.10  E-value=28  Score=33.07  Aligned_cols=22  Identities=9%  Similarity=0.258  Sum_probs=18.7

Q ss_pred             cEEEEEECCCeEEEEeCCCCcE
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNW  102 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~  102 (318)
                      ..++.++.|+.|..+|.++++.
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~  132 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQ  132 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCE
Confidence            6777888899999999998873

The alignment model contains an 8-bladed beta-propeller.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=87.03  E-value=9.4  Score=35.32  Aligned_cols=48  Identities=17%  Similarity=0.139  Sum_probs=36.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP   68 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~   68 (318)
                      ......+.++..+|.+++.|....=|.|.|+|+..           +..++.++|..++
T Consensus       304 ~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~-----------~~vvrmWKGYRdA  351 (415)
T PF14655_consen  304 PDSKREGESICLSPSGRLAAVTDSLGRVLLIDVAR-----------GIVVRMWKGYRDA  351 (415)
T ss_pred             ccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCC-----------ChhhhhhccCccc
Confidence            34566788999999999888877778999999863           4556666665444

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=86.80  E-value=22  Score=31.55  Aligned_cols=26  Identities=19%  Similarity=0.289  Sum_probs=16.7

Q ss_pred             ceEEEecCCC----eEEEEEccCCeEEEEE
Q psy2762         189 KRLVSGGCDN----LIKIWKQEGDKWIEET  214 (318)
Q Consensus       189 ~~lasgs~d~----~i~iwd~~~~~~~~~~  214 (318)
                      +..+.|+.++    .+.+||.++++|....
T Consensus       173 ~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~  202 (323)
T TIGR03548       173 ELYVFGGGSNIAYTDGYKYSPKKNQWQKVA  202 (323)
T ss_pred             EEEEEcCCCCccccceEEEecCCCeeEECC
Confidence            4556666653    2467898888875543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=86.46  E-value=26  Score=34.98  Aligned_cols=78  Identities=15%  Similarity=0.170  Sum_probs=50.6

Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-------------ceeeEE---e--eecCCcEEEEEEcCC---
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-------------TWTPFI---M--NTFDDVVWNVSWSLT---  279 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------------~~~~~~---~--~~~~~~v~~v~~spd---  279 (318)
                      ..|..|..+|+    |++||..|..+-+-+.=...+.             +.....   +  ......|..+.|+|.   
T Consensus        85 f~v~~i~~n~~----g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~  160 (717)
T PF10168_consen   85 FEVHQISLNPT----GSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES  160 (717)
T ss_pred             eeEEEEEECCC----CCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence            45888999996    8899999987754443221110             000000   0  112247999999997   


Q ss_pred             CCEEEEEeCCCeEEEEEECCCCc
Q psy2762         280 GDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       280 g~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +..|+.=..|+++|+||+.....
T Consensus       161 ~~~l~vLtsdn~lR~y~~~~~~~  183 (717)
T PF10168_consen  161 DSHLVVLTSDNTLRLYDISDPQH  183 (717)
T ss_pred             CCeEEEEecCCEEEEEecCCCCC
Confidence            47777777899999999875443

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=85.93  E-value=5.2  Score=38.57  Aligned_cols=37  Identities=16%  Similarity=0.241  Sum_probs=26.8

Q ss_pred             CcEEEEEEcC----CCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         269 DVVWNVSWSL----TGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       269 ~~v~~v~~sp----dg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      ..+.+++.++    +..+|++.+.|+++|+|++++......
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~  255 (547)
T PF11715_consen  215 SVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLAT  255 (547)
T ss_dssp             --EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEE
T ss_pred             CccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence            3456667776    778999999999999999988755443

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK13616 lipoprotein LpqB; Provisional

Probab=85.67  E-value=37  Score=33.15  Aligned_cols=110  Identities=13%  Similarity=0.133  Sum_probs=58.5

Q ss_pred             ceeeeeeecCCCCEEEEee------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          14 DMIHDAEMDYLGLYLATCS------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..+..++++|+|+.++.--      .|..-.||-....        .....+  ..+.  ..+.-.|++  +|..|++.+
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g--------g~~~~l--t~g~--~~t~PsWsp--DG~~lw~v~  415 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG--------GVAVQV--LEGH--SLTRPSWSL--DADAVWVVV  415 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC--------Ccceee--ecCC--CCCCceECC--CCCceEEEe
Confidence            4678889999999887654      3555566644211        011112  2222  256678864  477777765


Q ss_pred             CC-CeEEEEeCCCCcEEEEEEec------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          88 YD-RKVIIWRGDNGNWFKYYEYN------NHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        88 ~D-g~v~vWd~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      .. ..+++.+...........+.      .....|..+.|+||  +..+|... ++.|.+
T Consensus       416 dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpD--G~RiA~i~-~g~v~V  472 (591)
T PRK13616        416 DGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRD--GVRAAMII-GGKVYL  472 (591)
T ss_pred             cCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCC--CCEEEEEE-CCEEEE
Confidence            33 22333332111111111111      12457999999999  55565544 466665

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=85.63  E-value=25  Score=31.15  Aligned_cols=116  Identities=10%  Similarity=0.119  Sum_probs=61.4

Q ss_pred             CCCcceeeeeeecCCCCEEEEee-CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCS-SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s-~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .+|-..-+.++||||++.|.-+- ..+.|.-|+++.. ..   ...............+.-=.++..  .+|.+-+++-.
T Consensus       159 ~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~-~g---~~~~~~~~~~~~~~~G~PDG~~vD--adG~lw~~a~~  232 (307)
T COG3386         159 DDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPA-TG---PIGGRRGFVDFDEEPGLPDGMAVD--ADGNLWVAAVW  232 (307)
T ss_pred             cCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcc-cC---ccCCcceEEEccCCCCCCCceEEe--CCCCEEEeccc
Confidence            34444556799999997766654 3467777766520 00   000011111222233333334433  34666655555


Q ss_pred             CC-eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          89 DR-KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        89 Dg-~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +| .|.+|+.+ ++......++  ...+.+++|--.+...+++++..
T Consensus       233 ~g~~v~~~~pd-G~l~~~i~lP--~~~~t~~~FgG~~~~~L~iTs~~  276 (307)
T COG3386         233 GGGRVVRFNPD-GKLLGEIKLP--VKRPTNPAFGGPDLNTLYITSAR  276 (307)
T ss_pred             CCceEEEECCC-CcEEEEEECC--CCCCccceEeCCCcCEEEEEecC
Confidence            54 99999988 6655555443  35567777764333445555443

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=85.23  E-value=4.8  Score=23.03  Aligned_cols=28  Identities=14%  Similarity=0.290  Sum_probs=19.0

Q ss_pred             CCcEEEEEEcCCCCEEEEEe-CC--CeEEEE
Q psy2762         268 DDVVWNVSWSLTGDILTVSC-GD--NSVSLW  295 (318)
Q Consensus       268 ~~~v~~v~~spdg~~l~s~~-~D--~~v~iW  295 (318)
                      ...-...+|||||+.|+=++ .+  |.-.||
T Consensus         8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            34567889999999887665 44  566565

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=85.17  E-value=42  Score=33.33  Aligned_cols=65  Identities=6%  Similarity=0.085  Sum_probs=42.2

Q ss_pred             cceEEEecCCCeEEEEEccC--CeEEEEEEcccCCCCeeEEEEccCCCC-Ccc-EEEEEeCCCeEEEEEc
Q psy2762         188 AKRLVSGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGL-SKC-MIASCSQDRKVIIWTS  253 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~--~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~~-~l~s~s~D~~i~vw~~  253 (318)
                      ...||.+++...|.||-...  .+.. ...-..|...|-+|+|-++.-. .|. .+++++-.|.+.+|++
T Consensus       177 ~rlIAVSsNs~~VTVFaf~l~~~r~~-~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  177 SRLIAVSSNSQEVTVFAFALVDERFY-HVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ceEEEEecCCceEEEEEEeccccccc-cccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            46789999888899885432  1111 1001124455889999987421 132 7888999999999877

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG3630|consensus

Probab=85.10  E-value=5.3  Score=40.98  Aligned_cols=90  Identities=12%  Similarity=0.063  Sum_probs=58.2

Q ss_pred             EEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-CC
Q psy2762         191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DD  269 (318)
Q Consensus       191 lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-~~  269 (318)
                      .|....|+.|++..+....+ ....+ .-...+++|+|+|.    |.+++.|-..|++.-|.........+...+.. ..
T Consensus       171 ~av~l~dlsl~V~~~~~~~~-~v~s~-p~t~~~Tav~WSpr----GKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~y  244 (1405)
T KOG3630|consen  171 SAVDLSDLSLRVKSTKQLAQ-NVTSF-PVTNSQTAVLWSPR----GKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENY  244 (1405)
T ss_pred             hhhhccccchhhhhhhhhhh-hhccc-CcccceeeEEeccc----cceeeEecCCCeEEEeecccceeecccCCCcCCCc
Confidence            57778889999886542211 11111 23445899999995    89999999999999997654321111111112 25


Q ss_pred             cEEEEEEcCCCCEEEEE
Q psy2762         270 VVWNVSWSLTGDILTVS  286 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~  286 (318)
                      .|.+|.|-..-.+|+.-
T Consensus       245 rvl~v~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  245 RVLSVTWLSTQEFLVVY  261 (1405)
T ss_pred             ceeEEEEecceeEEEEe
Confidence            79999999777776653

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=84.56  E-value=31  Score=31.32  Aligned_cols=20  Identities=20%  Similarity=0.180  Sum_probs=15.3

Q ss_pred             cEEEEEEcCCCCEEEEEeCC
Q psy2762         270 VVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~~D  289 (318)
                      -.+.++|+|+|+++++-..+
T Consensus       185 np~Gl~~d~~G~l~~tdn~~  204 (367)
T TIGR02604       185 NPYGHSVDSWGDVFFCDNDD  204 (367)
T ss_pred             CCccceECCCCCEEEEccCC
Confidence            35689999999998765543

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=82.91  E-value=36  Score=30.71  Aligned_cols=102  Identities=14%  Similarity=0.215  Sum_probs=57.3

Q ss_pred             cCCCCEEEEe---------eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          22 DYLGLYLATC---------SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        22 ~~~g~~l~s~---------s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      |||+++++..         +..+.+-|||++.           + .+..+......+....|++  +|+.+|-.. ++.|
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~-----------~-~~~~l~~~~~~~~~~~~sP--~g~~~~~v~-~~nl   65 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIET-----------G-EITPLTPPPPKLQDAKWSP--DGKYIAFVR-DNNL   65 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTT-----------T-EEEESS-EETTBSEEEE-S--SSTEEEEEE-TTEE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCC-----------C-ceEECcCCccccccceeec--CCCeeEEEe-cCce
Confidence            5788877663         3346788888863           2 2334443367788899974  488888875 6889


Q ss_pred             EEEeCCCCcEEEEEEecCCC----------------cCeEEEEeeCCCCCcEEEEeec-CCeEEEE
Q psy2762          93 IIWRGDNGNWFKYYEYNNHD----------------SSVNSIAWAPKEFGLILACGSS-DGTISFL  141 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~----------------~~v~~v~~~p~~~~~~lasgs~-d~~i~i~  141 (318)
                      -+++...+...++ +..+-.                +.-..+-|+||  +..||.... +..|..+
T Consensus        66 y~~~~~~~~~~~l-T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd--~~~la~~~~d~~~v~~~  128 (353)
T PF00930_consen   66 YLRDLATGQETQL-TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPD--SKYLAFLRFDEREVPEY  128 (353)
T ss_dssp             EEESSTTSEEEES-ES--TTTEEESB--HHHHHHTSSSSBSEEE-TT--SSEEEEEEEE-TTS-EE
T ss_pred             EEEECCCCCeEEe-ccccceeEEcCccceeccccccccccceEECCC--CCEEEEEEECCcCCceE
Confidence            9998766643322 222200                12356789999  455555444 3444443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2377|consensus

Probab=82.86  E-value=31  Score=32.14  Aligned_cols=119  Identities=7%  Similarity=0.018  Sum_probs=77.4

Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      .+++.++.|||+.                 +.||.--.|++|.+++....+.  ...++.+..+..|...+|+.     .
T Consensus        66 ~G~I~SIkFSlDn-----------------kilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~-----s  123 (657)
T KOG2377|consen   66 KGEIKSIKFSLDN-----------------KILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS-----S  123 (657)
T ss_pred             CCceeEEEeccCc-----------------ceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec-----C
Confidence            3468889999973                 6799999999999999854332  11233444556689999987     4


Q ss_pred             cEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEE-EEe-CCCeEEEEEECCCC
Q psy2762         237 CMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT-VSC-GDNSVSLWKENTDG  301 (318)
Q Consensus       237 ~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~-s~~-~D~~v~iW~~~~~~  301 (318)
                      +-+|-.+..| +-+|...... ++.+....+...|+=-.|+|+.+.+. +++ ..+++.=+....++
T Consensus       124 ~e~A~i~~~G-~e~y~v~pek-rslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~  188 (657)
T KOG2377|consen  124 TEIAFITDQG-IEFYQVLPEK-RSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGT  188 (657)
T ss_pred             eeEEEEecCC-eEEEEEchhh-hhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeece
Confidence            6778777666 7888765432 23334455666677778898876533 333 45555555554433

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=82.22  E-value=7.1  Score=36.66  Aligned_cols=76  Identities=11%  Similarity=0.186  Sum_probs=55.0

Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ..+.++.-.||......+.++|.+|.-|-||+||--+.+.  ...++++.+.|..+..+++|+.|+++|.. .+-+=|+
T Consensus       556 sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rA--KtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~  631 (776)
T COG5167         556 SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRA--KTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV  631 (776)
T ss_pred             ehhccccccccccccccCceEEEecCCCceeeehhhcchh--hhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence            3444555566654444567999999999999998655331  23456777889999999999999988864 6666664

>TIGR02608 delta_60_rpt delta-60 repeat domain

Probab=81.68  E-value=5.7  Score=25.20  Aligned_cols=35  Identities=29%  Similarity=0.444  Sum_probs=26.8

Q ss_pred             cEEEEEEcCCCCEEEEEe-----CCCeEEEEEECCCCceE
Q psy2762         270 VVWNVSWSLTGDILTVSC-----GDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~-----~D~~v~iW~~~~~~~~~  304 (318)
                      .+++++.-|||+.|+.|.     .+....|++++.+|...
T Consensus         2 ~~~~~~~q~DGkIlv~G~~~~~~~~~~~~l~Rln~DGsLD   41 (55)
T TIGR02608         2 RAYAVAVQSDGKILVAGYVDNSSGNNDFVLARLNADGSLD   41 (55)
T ss_pred             ceEEEEECCCCcEEEEEEeecCCCcccEEEEEECCCCCcc
Confidence            467899999999999884     34567788888877544

This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=81.15  E-value=54  Score=31.63  Aligned_cols=156  Identities=13%  Similarity=0.212  Sum_probs=77.1

Q ss_pred             ccCeEEEEecCCCCCcEEEEEE---CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--CcEEEEeecCCeEEE
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCS---YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--GLILACGSSDGTISF  140 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s---~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~~lasgs~d~~i~i  140 (318)
                      --+|..++|.   ||+.++-..   ..|.+++=|     ...+.+|    ..|..++|.|-..  ...+.+..-.+.|.+
T Consensus        19 iHPvhGlaWT---DGkqVvLT~L~l~~gE~kfGd-----s~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtV   86 (671)
T PF15390_consen   19 IHPVHGLAWT---DGKQVVLTDLQLHNGEPKFGD-----SKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTV   86 (671)
T ss_pred             hccccceEec---CCCEEEEEeeeeeCCccccCC-----ccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEE
Confidence            3568889994   466554432   133333321     1123333    3488999998521  123445566788999


Q ss_pred             EEeecCC---CCcceeeec--cccccc--ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE-EccCCeEEE
Q psy2762         141 LTYMSDT---NSWESRKIA--AHTIGC--NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW-KQEGDKWIE  212 (318)
Q Consensus       141 ~~~~~~~---~~~~~~~~~--~h~~~v--~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw-d~~~~~~~~  212 (318)
                      |.+-...   +.+..-+.-  .-..++  ..+.|+|.+.                 .|+. -...-+.|+ +.......-
T Consensus        87 WqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~-----------------iL~V-LT~~dvSV~~sV~~d~srV  148 (671)
T PF15390_consen   87 WQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKA-----------------ILTV-LTARDVSVLPSVHCDSSRV  148 (671)
T ss_pred             EEeccCccccccceeeeeeeccCCcccCCCcccccCCCc-----------------eEEE-EecCceeEeeeeeeCCceE
Confidence            9874221   111111100  111222  3578999642                 1211 111123322 322111111


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      ...+ .-.+.|.|-||.++   +.++++..+.-=.-.|||...
T Consensus       149 kaDi-~~~G~IhCACWT~D---G~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  149 KADI-KTSGLIHCACWTKD---GQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             EEec-cCCceEEEEEecCc---CCEEEEEeCCeEEEEEecCch
Confidence            2223 23355999999997   344555566666678897543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	318
3bg0_A	316	Architecture Of A Coat For The Nuclear Pore Membran		1e-104
2pm9_B	297	Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O		4e-70
3jro_A	753	Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice		6e-70
3jrp_A	379	Sec13 With Nup145c (Aa109-179) Insertion Blade Leng		1e-69
2pm6_B	297	Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF		2e-69
2pm7_B	297	Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF		5e-67
3f3f_A	351	Crystal Structure Of The Nucleoporin Pair Nup85-Seh		1e-26
3ewe_A	349	Crystal Structure Of The Nup85SEH1 COMPLEX Length =		1e-26
3f3p_A	351	Crystal Structure Of The Nucleoporin Pair Nup85-Seh		3e-26
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		5e-15
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-05
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		3e-14
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		7e-09
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-10
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		4e-09
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		5e-05
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		7e-09
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		7e-09
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		1e-08
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		2e-08
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		4e-08
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		2e-06
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		2e-06
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		3e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		6e-06
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-05
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		6e-05
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-05
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		1e-04
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		3e-04
3dwl_C	377	Crystal Structure Of Fission Yeast Arp2/3 Complex L		4e-04
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		5e-04

>pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316

Iteration: 1
 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/315 (60%), Positives = 231/315 (73%), Gaps = 14/315 (4%)
Query: 1   MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA 60
           MVS +N VDT HEDMIHDA+MDY G  LATCSSD +VK+F++ RN  +         LIA
Sbjct: 1   MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQ--------ILIA 51
Query: 61  ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW 120
           +L+GH GPVWQVAWAHP +G +LASCSYDRKVIIWR +NG W K +E+  HDSSVNS+ W
Sbjct: 52  DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCW 111
Query: 121 APKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDL 179
           AP ++GLILACGSSDG IS LTY  +   WE +KI  AHTIGCNAVSW P +   S +D 
Sbjct: 112 APHDYGLILACGSSDGAISLLTYTGE-GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170
Query: 180 KGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM 238
              +     KR  SGGCDNLIK+WK+E D +W EE KLE HSDWVRDVAWAPS GL    
Sbjct: 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230
Query: 239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           IASCSQD +V IWT +D    TW+P +++ F+DVVW+VSWS+T +IL VS GDN V+LWK
Sbjct: 231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290
Query: 297 ENTDGAWQCITEMGK 311
           E+ DG W CI+++ K
Sbjct: 291 ESVDGQWVCISDVNK 305

>pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297

Iteration: 1
 Score =  261 bits (666), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 139/309 (44%), Positives = 191/309 (61%), Gaps = 22/309 (7%)
Query: 7   LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
           ++   H +MIHDA MDY G  +ATCSSD T+K+F ++    K         LI  L GH 
Sbjct: 3   VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK---------LIDTLTGHE 53
Query: 67  GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           GPVW+V WAHP+FGT+LASCSYD KV+IW+ +NG W +   +  H +SVNS+ WAP E+G
Sbjct: 54  GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG- 185
            +L   SSDG +S + +  +  +     I AH IG N+ SW P       ++  G   G 
Sbjct: 114 PMLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAPAT-----IEEDGEHNGT 167
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
             +++ V+GG DNL+KIWK   D   ++ E+ LE HSDWVRDVAW+P+  L +  +AS S
Sbjct: 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT-VLLRSYMASVS 226
Query: 244 QDRKVIIWTS-NDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           QDR  IIWT  N+   W   ++    F DV+W  SWSL+G++L +S GDN V+LWKEN +
Sbjct: 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286
Query: 301 GAWQCITEM 309
           G W+   E+
Sbjct: 287 GKWEPAGEV 295

>pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753

Iteration: 1
 Score =  260 bits (665), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 191/309 (61%), Gaps = 22/309 (7%)
Query: 7   LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
           ++   H ++IHDA +DY G  LATCSSD T+K+F ++    K         LI  L GH 
Sbjct: 3   VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------LIDTLTGHE 53
Query: 67  GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           GPVW+V WAHP+FGT+LASCSYD KV+IW+ +NG W +   +  H +SVNS+ WAP E+G
Sbjct: 54  GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG- 185
            +L   SSDG +S + +  +  +     I AH IG N+ SW P       ++  G   G 
Sbjct: 114 PLLLVASSDGKVSVVEF-KENGTTSPIIIDAHAIGVNSASWAPAT-----IEEDGEHNGT 167
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
             +++ V+GG DNL+KIWK   D   ++ E+ LE HSDWVRDVAW+P+  L +  +AS S
Sbjct: 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVS 226
Query: 244 QDRKVIIWTS-NDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           QDR  IIWT  N+   W   ++    F DV+W  SWSL+G++L +S GDN V+LWKEN +
Sbjct: 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286
Query: 301 GAWQCITEM 309
           G W+   E+
Sbjct: 287 GKWEPAGEV 295

>pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379

Iteration: 1
 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 191/309 (61%), Gaps = 22/309 (7%)
Query: 7   LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
           ++   H ++IHDA +DY G  LATCSSD T+K+F ++    K         LI  L GH 
Sbjct: 5   VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------LIDTLTGHE 55
Query: 67  GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           GPVW+V WAHP+FGT+LASCSYD KV+IW+ +NG W +   +  H +SVNS+ WAP E+G
Sbjct: 56  GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 115
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG- 185
            +L   SSDG +S + +  +  +     I AH IG N+ SW P       ++  G   G 
Sbjct: 116 PLLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAPAT-----IEEDGEHNGT 169
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
             +++ V+GG DNL+KIWK   D   ++ E+ LE HSDWVRDVAW+P+  L +  +AS S
Sbjct: 170 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT-VLLRSYLASVS 228
Query: 244 QDRKVIIWTS-NDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           QDR  IIWT  N+   W   ++    F DV+W  SWSL+G++L +S GDN V+LWKEN +
Sbjct: 229 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288
Query: 301 GAWQCITEM 309
           G W+   E+
Sbjct: 289 GKWEPAGEV 297

>pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297

Iteration: 1
 Score =  259 bits (661), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/309 (44%), Positives = 192/309 (62%), Gaps = 22/309 (7%)
Query: 7   LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
           ++   H ++IHDA +DY G  LATCSSD T+K+F ++    K         LI  L GH 
Sbjct: 3   VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------LIDTLTGHE 53
Query: 67  GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           GPVW+V WAHP+FGT+LASCSYD KV+IW+ +NG W +   +  H +SVNS+ WAP E+G
Sbjct: 54  GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG- 185
            +L   SSDG +S + +  +  +     I AH IG N+ SW P     + ++  G   G 
Sbjct: 114 PLLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAP-----ATIEEDGEHNGT 167
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
             +++ V+GG DNL+KIWK   D   ++ E+ LE HSDWVRDVAW+P+  L +  +AS S
Sbjct: 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT-VLLRSYLASVS 226
Query: 244 QDRKVIIWTS-NDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           QDR  IIWT  N+   W   ++    F DV+W  SWSL+G++L +S GDN V+LWKEN +
Sbjct: 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286
Query: 301 GAWQCITEM 309
           G W+   E+
Sbjct: 287 GKWEPAGEV 295

>pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297

Iteration: 1
 Score =  251 bits (640), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/309 (44%), Positives = 185/309 (59%), Gaps = 22/309 (7%)
Query: 7   LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS 66
           ++   H + IHDA  DY G   ATCSSD T+K+F ++    K         LI  L GH 
Sbjct: 3   VIANAHNEXIHDAVXDYYGKRXATCSSDKTIKIFEVEGETHK---------LIDTLTGHE 53
Query: 67  GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG 126
           GPVW+V WAHP+FGT+LASCSYD KV IW+ +NG W +   +  H +SVNS+ WAP E+G
Sbjct: 54  GPVWRVDWAHPKFGTILASCSYDGKVXIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113
Query: 127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG- 185
             L   SSDG +S + +  +  +     I AH IG N+ SW P       ++  G   G 
Sbjct: 114 PXLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAPAT-----IEEDGEHNGT 167
Query: 186 GVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
             +++ V+GG DNL+KIWK   D   ++ E+ LE HSDWVRDVAW+P+  L +   AS S
Sbjct: 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT-VLLRSYXASVS 226
Query: 244 QDRKVIIWTS-NDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           QDR  IIWT  N+   W   ++    F DV+W  SWSL+G++L +S GDN V+LWKEN +
Sbjct: 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286
Query: 301 GAWQCITEM 309
           G W+   E+
Sbjct: 287 GKWEPAGEV 295

>pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 152/365 (41%), Gaps = 82/365 (22%)
Query: 4   QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
            +   D+GH+D++HD   D+ G ++ATCSSD  +KVF LD++       +    L    +
Sbjct: 2   HMQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD-------TSNWELSDSWR 54
Query: 64  GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-------WFKYYEYNNHDSSVN 116
            H   +  + WA P++G ++AS SYD+ V +W  D          W K    N+   S+ 
Sbjct: 55  AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY 114
Query: 117 SIAWAPKEFGLILACGSSDGTISFLTYM--SDTNSWE--------SRKIAAHTIGCNAVS 166
           S+ +AP   GL LAC  +DG +     +  SD  SW         S   A H      +S
Sbjct: 115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLS 174
Query: 167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV 226
           W P   S  +L +   +   + +R    G D  + +            KL  H   +R +
Sbjct: 175 WCPSRFSPEKLAVSALEQAIIYQR----GKDGKLHV----------AAKLPGHKSLIRSI 220
Query: 227 AWAPSWGLSKCMIASCSQDRKVIIW---------TSNDYVTWTPFIMNTFD--------- 268
           +WAPS G    +IA+  +D ++ I+          S + +T +    N+ D         
Sbjct: 221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRS 280
Query: 269 --------------------------DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA 302
                                       VW+VSW+LTG IL+ +  D  V LWK      
Sbjct: 281 DSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340
Query: 303 WQCIT 307
           ++C++
Sbjct: 341 FKCMS 345

>pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 152/364 (41%), Gaps = 82/364 (22%)
Query: 5   LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG 64
           +   D+GH+D++HD   D+ G ++ATCSSD  +KVF LD++       +    L    + 
Sbjct: 1   MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD-------TSNWELSDSWRA 53
Query: 65  HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-------WFKYYEYNNHDSSVNS 117
           H   +  + WA P++G ++AS SYD+ V +W  D          W K    N+   S+ S
Sbjct: 54  HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYS 113
Query: 118 IAWAPKEFGLILACGSSDGTISFLTYM--SDTNSWE--------SRKIAAHTIGCNAVSW 167
           + +AP   GL LAC  +DG +     +  SD  SW         S   A H      +SW
Sbjct: 114 VKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 173
Query: 168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA 227
            P   S  +L +   +   + +R    G D  + +            KL  H   +R ++
Sbjct: 174 CPSRFSPEKLAVSALEQAIIYQR----GKDGKLHV----------AAKLPGHKSLIRSIS 219
Query: 228 WAPSWGLSKCMIASCSQDRKVIIW---------TSNDYVTWTPFIMNTFD---------- 268
           WAPS G    +IA+  +D ++ I+          S + +T +    N+ D          
Sbjct: 220 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSD 279
Query: 269 -------------------------DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW 303
                                      VW+VSW+LTG IL+ +  D  V LWK      +
Sbjct: 280 SNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF 339
Query: 304 QCIT 307
           +C++
Sbjct: 340 KCMS 343

>pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 150/362 (41%), Gaps = 86/362 (23%)
Query: 9   DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP 68
           D+GH+D++HD   D+ G ++ATCSSD  +KVF LD++       +    L    + H   
Sbjct: 7   DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD-------TSNWELSDSWRAHDSS 59
Query: 69  VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-------WFKYYEYNNHDSSVNSIAWA 121
           +  + WA P++G ++AS SYD+ V +W  D          W K    N+   S+ S+ +A
Sbjct: 60  IVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFA 119
Query: 122 PKEFGLILACGSSDGTISFLTYM--SDTNSWE--------SRKIAAHTIGCNAVSWGPGI 171
           P   GL LAC  +DG +     +  SD  SW         S   A H      +SW P  
Sbjct: 120 PAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEXKVLSIPPANHLQSDFCLSWCPSR 179
Query: 172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPS 231
            S  +L +   +   + +R    G D  + +            KL  H   +R ++WAPS
Sbjct: 180 FSPEKLAVSALEQAIIYQR----GKDGKLHV----------AAKLPGHKSLIRSISWAPS 225
Query: 232 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI-------MNTFDDV-------------- 270
            G    +IA+  +D ++ I+   + +  +P          N FD+               
Sbjct: 226 IGRWYQLIATGCKDGRIRIFKITEKL--SPLASEESLTNSNXFDNSADVDXDAQGRSDSN 283
Query: 271 -------------------------VWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
                                    VW+VSW+LTG IL+ +  D  V LWK      ++C
Sbjct: 284 TEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343
Query: 306 IT 307
            +
Sbjct: 344 XS 345

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 121/295 (41%), Gaps = 50/295 (16%)
Query: 4   QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK 63
           QL    TGH   +        G  +A+ S D TVK++N  RN          G L+  L 
Sbjct: 89  QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN--RN----------GQLLQTLT 136
Query: 64  GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
           GHS  VW VA++ P  G  +AS S D+ V +W   N N         H SSV  +A++P 
Sbjct: 137 GHSSSVWGVAFS-PD-GQTIASASDDKTVKLW---NRNGQLLQTLTGHSSSVWGVAFSPD 191
Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
             G  +A  S D T+       + N    + +  H+     V++ P              
Sbjct: 192 --GQTIASASDDKTVKLW----NRNGQLLQTLTGHSSSVRGVAFSPD------------- 232
Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS 243
                + + S   D  +K+W + G   + +T L  HS  V  VA+ P        IAS S
Sbjct: 233 ----GQTIASASDDKTVKLWNRNGQ--LLQT-LTGHSSSVNGVAFRPD----GQTIASAS 281
Query: 244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN 298
            D+ V +W  N  +  T   +      VW V++S  G  +  +  D +V LW  N
Sbjct: 282 DDKTVKLWNRNGQLLQT---LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 333

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV 271
           E  +LE HS  VR VA++P        IAS S D+ V +W  N  +  T   +      V
Sbjct: 8   ERNRLEAHSSSVRGVAFSPD----GQTIASASDDKTVKLWNRNGQLLQT---LTGHSSSV 60
Query: 272 WNVSWSLTGDILTVSCGDNSVSLWKEN 298
           W V++S  G  +  +  D +V LW  N
Sbjct: 61  WGVAFSPDGQTIASASDDKTVKLWNRN 87

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 49/291 (16%)
Query: 25  GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
           G  LA+C  D  ++++  +      DS   K  L    +GH   V +VAW+    G  LA
Sbjct: 28  GTLLASCGGDRRIRIWGTE-----GDSWICKSVLS---EGHQRTVRKVAWS--PCGNYLA 77
Query: 85  SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
           S S+D    IW+ +  ++        H++ V S+AWAP   G +LA  S D ++ ++  +
Sbjct: 78  SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSV-WVWEV 134
Query: 145 SDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW 203
            + + +E   +  +HT     V W P                   + L S   D+ +K++
Sbjct: 135 DEEDEYECVSVLNSHTQDVKHVVWHPS-----------------QELLASASYDDTVKLY 177
Query: 204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW------------ 251
           ++E D W+    LE H   V  +A+ PS       +ASCS DR V IW            
Sbjct: 178 REEEDDWVCCATLEGHESTVWSLAFDPSGQ----RLASCSDDRTVRIWRQYLPGNEQGVA 233
Query: 252 TSNDYVTWTPF--IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
            S    +W     +       +++++W      L  +CGD+++ +++E+ +
Sbjct: 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
           L S G D  I+IW  EGD WI ++ L E H   VR VAW+P        +AS S D    
Sbjct: 31  LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN----YLASASFDATTC 86
Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
           IW  N         +   ++ V +V+W+ +G++L     D SV +W+ + +  ++C++ +
Sbjct: 87  IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146
Query: 310 GKTSE 314
              ++
Sbjct: 147 NSHTQ 151

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 31/289 (10%)
Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
           GH D + D   D+ G  LA+CS+D T+K+++            Q    I  + GH   V 
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDF-----------QGFECIRTMHGHDHNVS 196
Query: 71  QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
            V+   P  G  + S S D+ + +W    G   K   +  H   V  +   P + G ++A
Sbjct: 197 SVSIM-PN-GDHIVSASRDKTIKMWEVQTGYCVK--TFTGHREWVRMV--RPNQDGTLIA 250
Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS---KLGGV 187
             S+D T+      +     E R+   H + C  +SW P     S  +  GS   K G  
Sbjct: 251 SCSNDQTVRVWVVATKECKAELRE-HRHVVEC--ISWAPESSYSSISEATGSETKKSGKP 307
Query: 188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK 247
              L+SG  D  IK+W       +    L  H +WVR V +          I SC+ D+ 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCL--MTLVGHDNWVRGVLFHSGGKF----ILSCADDKT 361
Query: 248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           + +W   +        +N  +  V ++ +  T   +     D +V +W+
Sbjct: 362 LRVWDYKNKRCMK--TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
           GHE+ +        G YLATCS D +V ++  D +        ++   I+ L+ HS  V 
Sbjct: 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES-------GEEYECISVLQEHSQDVK 157
Query: 71  QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
            V W HP    LLAS SYD  V IW+  + +W      N H+ +V S  +   E    L 
Sbjct: 158 HVIW-HPS-EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215
Query: 131 CGSSDGTISFLTYMSD 146
            GS D T+    YM D
Sbjct: 216 SGSDDSTVRVWKYMGD 231

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 118/308 (38%), Gaps = 59/308 (19%)
Query: 21  MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--GHSGPVWQVAWAHPQ 78
            D+    LAT S+D  +K+ ++    K DD      TLI  L    H   +  VAW  P 
Sbjct: 20  FDFSQGILATGSTDRKIKLVSV----KYDDF-----TLIDVLDETAHKKAIRSVAW-RPH 69
Query: 79  FGTLLASCSYDRKVIIWRGDNGNWFKYYEYN------NHDSSVNSIAWAPKEFGLILACG 132
             +LLA+ S+D  V IW  +     + +E +       H++ V  +AW+    G  LA  
Sbjct: 70  -TSLLAAGSFDSTVSIWAKEESA-DRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATC 125
Query: 133 SSDGTISFLTYMSDTNSWESRKIAA---HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
           S D ++    + +D +  E   I+    H+     V W P                    
Sbjct: 126 SRDKSV--WIWETDESGEEYECISVLQEHSQDVKHVIWHPS-----------------EA 166
Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--SQDRK 247
            L S   D+ ++IWK   D W     L  H   V    W+  +  ++ +   C  S D  
Sbjct: 167 LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV----WSSDFDKTEGVFRLCSGSDDST 222
Query: 248 VIIWT-----SNDYVTWT--PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD 300
           V +W       +D   W     + +     V+NV+W   G  L  S G + V    E  D
Sbjct: 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD 280
Query: 301 GAWQCITE 308
           G W+   +
Sbjct: 281 GEWKVFAK 288

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 6   NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
            LV   H D ++ A     G  +A+C +D T++VF            ++ G  + ++K H
Sbjct: 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFK-----------AETGEKLLDIKAH 656
Query: 66  SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
              V   A++     + +A+CS D+KV IW    G     + Y+ H   VN   +  K  
Sbjct: 657 EDEVLCCAFSSDD--SYIATCSADKKVKIWDSATGKLV--HTYDEHSEQVNCCHFTNKSN 712
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGP 169
            L+LA GS+D    F   + D N  E R  +  HT   N   + P
Sbjct: 713 HLLLATGSND----FFLKLWDLNQKECRNTMFGHTNSVNHCRFSP 753

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 6   NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH 65
            LV   H D ++ A     G  +A+C +D T++VF            ++ G  + ++K H
Sbjct: 615 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFK-----------AETGEKLLDIKAH 663
Query: 66  SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
              V   A++     + +A+CS D+KV IW    G     + Y+ H   VN   +  K  
Sbjct: 664 EDEVLCCAFSSDD--SYIATCSADKKVKIWDSATGKLV--HTYDEHSEQVNCCHFTNKSN 719
Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGCNAVSWGP 169
            L+LA GS+D    F   + D N  E R  +  HT   N   + P
Sbjct: 720 HLLLATGSND----FFLKLWDLNQKECRNTMFGHTNSVNHCRFSP 760

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 44  RNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGN 101
            NL      +++ TL   LKGH+G V Q+A   PQF  ++ S S D+ +I+W+   D  N
Sbjct: 16  ENLYFQSMMTEQMTLRGTLKGHNGWVTQIA-TTPQFPDMILSASRDKTIIMWKLTRDETN 74
Query: 102 W-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI 160
           +         H   V+ +  +    G     GS DGT+      + T    +R+   HT 
Sbjct: 75  YGIPQRALRGHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTT---TRRFVGHTK 129
Query: 161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENH 219
              +V++                     +++VSG  D  IK+W   G  K+  +   E+H
Sbjct: 130 DVLSVAFSSD-----------------NRQIVSGSRDKTIKLWNTLGVCKYTVQD--ESH 170
Query: 220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
           S+WV  V ++P+   S  +I SC  D+ V +W
Sbjct: 171 SEWVSCVRFSPN--SSNPIIVSCGWDKLVKVW 200

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 53  SQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR--GDNGNW-FKYYEYN 109
           +++ TL   LKGH+G V Q+A   PQF  ++ S S D+ +I+W+   D  N+        
Sbjct: 2   TEQMTLRGTLKGHNGWVTQIA-TTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR 60
Query: 110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP 169
            H   V+ +  +    G     GS DGT+      + T    +R+   HT    +V++  
Sbjct: 61  GHSHFVSDVVISSD--GQFALSGSWDGTLRLWDLTTGTT---TRRFVGHTKDVLSVAFSS 115
Query: 170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAW 228
                              +++VSG  D  IK+W   G  K+  +   E+HS+WV  V +
Sbjct: 116 D-----------------NRQIVSGSRDKTIKLWNTLGVCKYTVQD--ESHSEWVSCVRF 156
Query: 229 APSWGLSKCMIASCSQDRKVIIW 251
           +P+   S  +I SC  D+ V +W
Sbjct: 157 SPN--SSNPIIVSCGWDKLVKVW 177

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 24  LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83
           L  YL + S DHT+ +++++   K+      K        GH+  V  VAW H    +L 
Sbjct: 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT----GHTAVVEDVAW-HLLHESLF 247
Query: 84  ASCSYDRKVIIWRGDNGNWFKY-YEYNNHDSSVNSIAWAP-KEFGLILACGSSDGTISFL 141
            S + D+K++IW   N N  K  +  + H + VN +++ P  EF  ILA GS+D T++  
Sbjct: 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF--ILATGSADKTVAL- 304
Query: 142 TYMSDTNSWESR--KIAAHTIGCN-----AVSWGPGIGSLSELDLKGSKLGGVAKRLVSG 194
                   W+ R  K+  H+   +      V W P   ++                L S 
Sbjct: 305 --------WDLRNLKLKLHSFESHKDEIFQVQWSPHNETI----------------LASS 340
Query: 195 GCDNLIKIWKQEGDKWIEETKLEN--------------HSDWVRDVAWAPSWGLSKCMIA 240
           G D  + +W  +  K  EE   E+              H+  + D +W P+      +I 
Sbjct: 341 GTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWIIC 395
Query: 241 SCSQDRKVIIW 251
           S S+D  + +W
Sbjct: 396 SVSEDNIMQVW 406

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 24  LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83
           L  YL + S DHT+ +++++   K+      K        GH+  V  VAW H    +L 
Sbjct: 195 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT----GHTAVVEDVAW-HLLHESLF 249
Query: 84  ASCSYDRKVIIWRGDNGNWFKY-YEYNNHDSSVNSIAWAP-KEFGLILACGSSDGTISFL 141
            S + D+K++IW   N N  K  +  + H + VN +++ P  EF  ILA GS+D T++  
Sbjct: 250 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF--ILATGSADKTVAL- 306
Query: 142 TYMSDTNSWESR--KIAAHTIGCN-----AVSWGPGIGSLSELDLKGSKLGGVAKRLVSG 194
                   W+ R  K+  H+   +      V W P   ++                L S 
Sbjct: 307 --------WDLRNLKLKLHSFESHKDEIFQVQWSPHNETI----------------LASS 342
Query: 195 GCDNLIKIWKQEGDKWIEETKLEN--------------HSDWVRDVAWAPSWGLSKCMIA 240
           G D  + +W  +  K  EE   E+              H+  + D +W P+      +I 
Sbjct: 343 GTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWIIC 397
Query: 241 SCSQDRKVIIW 251
           S S+D  + +W
Sbjct: 398 SVSEDNIMQVW 408

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 60/251 (23%)
Query: 24  LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL 83
           L  YL + S DHT+ +++++   K+      K        GH+  V  VAW H    +L 
Sbjct: 197 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT----GHTAVVEDVAW-HLLHESLF 251
Query: 84  ASCSYDRKVIIWRGDNGNWFKY-YEYNNHDSSVNSIAWAP-KEFGLILACGSSDGTISFL 141
            S + D+K++IW   N N  K  +  + H + VN +++ P  EF  ILA GS+D T++  
Sbjct: 252 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEF--ILATGSADKTVAL- 308
Query: 142 TYMSDTNSWESR--KIAAHTIGCN-----AVSWGPGIGSLSELDLKGSKLGGVAKRLVSG 194
                   W+ R  K+  H+   +      V W P   ++                L S 
Sbjct: 309 --------WDLRNLKLKLHSFESHKDEIFQVQWSPHNETI----------------LASS 344
Query: 195 GCDNLIKIWKQEGDKWIEETKLEN--------------HSDWVRDVAWAPSWGLSKCMIA 240
           G D  + +W  +  K  EE   E+              H+  + D +W P+      +I 
Sbjct: 345 GTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPN---EPWIIC 399
Query: 241 SCSQDRKVIIW 251
           S S+D  + +W
Sbjct: 400 SVSEDNIMQVW 410

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 111/294 (37%), Gaps = 61/294 (20%)
Query: 62  LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
           LKGH   V  + W   +    + S S D KVI+W  D+    K +      + V + A+A
Sbjct: 60  LKGHGNKVLCMDWCKDK--RRIVSSSQDGKVIVW--DSFTTNKEHAVTMPCTWVMACAYA 115
Query: 122 PKEFGLILACGSSDGTISFLTYMSDTN---SWESRKIAAHTIGCNAVSW----------- 167
           P   G  +ACG  D   S      D N   + + + +A HT   +A S+           
Sbjct: 116 PS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS 173
Query: 168 GPGI--------GSLSE-----------LDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD 208
           G G         G L +           LDL  S+ G      VSGGCD    +W     
Sbjct: 174 GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT---FVSGGCDKKAMVWDMRSG 230
Query: 209 KWIEETKLENHSDWVRDVAWAPSWGL-------SKCMIASCSQDRKVIIW---------T 252
           + ++    E H   V  V + PS          + C +     DR+V I+         +
Sbjct: 231 QCVQ--AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288
Query: 253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQC 305
           S D+      +   ++D   NV   L G  +++  G +N VS  + + DG   C
Sbjct: 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 29/207 (14%)
Query: 45  NLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFK 104
           N  +  S    G     L+GHS  V  VA ++   G    S S+D  + +W   NG    
Sbjct: 46  NPDRHSSECSYGLPDRRLEGHSAFVSDVALSN--NGNFAVSASWDHSLRLWNLQNGQC-- 101
Query: 105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA 164
            Y++  H   V S+A++P    ++   G  D  +       +     SR   AHT   + 
Sbjct: 102 QYKFLGHTKDVLSVAFSPDNRQIV--SGGRDNALRVWNVKGECMHTLSR--GAHTDWVSC 157
Query: 165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVR 224
           V + P +                A  +VSGG DNL+K+W     + +  T L+ H+++V 
Sbjct: 158 VRFSPSLD---------------APVIVSGGWDNLVKVWDLATGRLV--TDLKGHTNYVT 200
Query: 225 DVAWAPSWGLSKCMIASCSQDRKVIIW 251
            V  +P   L     AS  +D    +W
Sbjct: 201 SVTVSPDGSL----CASSDKDGVARLW 223

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 33/198 (16%)
Query: 80  GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139
           G +LA  + D  V +W   +G+  +  +       ++S+AW  +  G  LA G+S   + 
Sbjct: 36  GNVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQ 92
Query: 140 FLTYMSDTNSWESRKIAAHTIGCNAVSW-------GPGIGSLSELDLK------------ 180
                        R + +H+    ++SW       G   G +   D++            
Sbjct: 93  LWDVQQQK---RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149
Query: 181 -----GSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWG 233
                G +     + L SGG DNL+ +W     +  W+       H   V+ VAW P W 
Sbjct: 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP-WQ 208
Query: 234 LSKCMIASCSQDRKVIIW 251
            +       + DR + IW
Sbjct: 209 SNVLATGGGTSDRHIRIW 226

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 33/198 (16%)
Query: 80  GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139
           G +LA  + D  V +W   +G+  +  +       ++S+AW  +  G  LA G+S   + 
Sbjct: 116 GNVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQ 172
Query: 140 FLTYMSDTNSWESRKIAAHTIGCNAVSW-------GPGIGSLSELDLK------------ 180
                        R + +H+    ++SW       G   G +   D++            
Sbjct: 173 LWDVQQQK---RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229
Query: 181 -----GSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWG 233
                G +     + L SGG DNL+ +W     +  W+       H   V+ VAW P W 
Sbjct: 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP-WQ 288
Query: 234 LSKCMIASCSQDRKVIIW 251
            +       + DR + IW
Sbjct: 289 SNVLATGGGTSDRHIRIW 306

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 33/198 (16%)
Query: 80  GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS 139
           G +LA  + D  V +W   +G+  +  +       ++S+AW  KE G  LA G+S   + 
Sbjct: 127 GNVLA-VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWI-KE-GNYLAVGTSSAEVQ 183
Query: 140 FLTYMSDTNSWESRKIAAHTIGCNAVSW-------GPGIGSLSELDLK------------ 180
                        R + +H+    ++SW       G   G +   D++            
Sbjct: 184 LWDVQQQK---RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 240
Query: 181 -----GSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWG 233
                G +     + L SGG DNL+ +W     +  W+       H   V+ VAW P W 
Sbjct: 241 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP-WQ 299
Query: 234 LSKCMIASCSQDRKVIIW 251
            +       + DR + IW
Sbjct: 300 SNVLATGGGTSDRHIRIW 317

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 31/230 (13%)
Query: 27  YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86
           Y+ T + D  ++V+         DS ++K   + +L GH G VW + +AH   G +L S 
Sbjct: 134 YVITGADDKMIRVY---------DSINKK--FLLQLSGHDGGVWALKYAH---GGILVSG 179
Query: 87  SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF-----L 141
           S DR V +W    G     +E   H+S+V  +     +    +  GS D T+        
Sbjct: 180 STDRTVRVWDIKKGCCTHVFE--GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237
Query: 142 TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIK 201
           + + D        +  HT   N    G   G ++ +      + G    +VSG  DN + 
Sbjct: 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASV----RTVSGHGNIVVSGSYDNTLI 293
Query: 202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
           +W     K +    L  H+D +    +       +C+  S S D  + IW
Sbjct: 294 VWDVAQMKCL--YILSGHTDRIYSTIYDHER--KRCI--SASMDTTIRIW 337

>pdb|3DWL|C Chain C, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 377

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 191 LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII 250
            V+    N +++++Q+G+ W       +H   V  V WAP        I +CSQDR   +
Sbjct: 26  FVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP----KSNRIVTCSQDRNAYV 81
Query: 251 WTSNDYVTW-TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL 294
           +      TW    ++   +     V WS   D   V  G   +S+
Sbjct: 82  YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISV 126

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 31/230 (13%)
Query: 27  YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC 86
           Y+ T + D  ++V+         DS ++K   + +L GH G VW + +AH   G +L S 
Sbjct: 134 YVITGADDKXIRVY---------DSINKK--FLLQLSGHDGGVWALKYAH---GGILVSG 179
Query: 87  SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF-----L 141
           S DR V +W    G     +E   H+S+V  +     +    +  GS D T+        
Sbjct: 180 STDRTVRVWDIKKGCCTHVFE--GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237
Query: 142 TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIK 201
           + + D        +  HT   N    G   G  + +      + G    +VSG  DN + 
Sbjct: 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHXASV----RTVSGHGNIVVSGSYDNTLI 293
Query: 202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW 251
           +W     K +    L  H+D +    +       +C+  S S D  + IW
Sbjct: 294 VWDVAQXKCL--YILSGHTDRIYSTIYDHER--KRCI--SASXDTTIRIW 337

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	318
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.98
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.98
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.98
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.98
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.97
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.95
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.94
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.92
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.92
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.91
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.91
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.91
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.9
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.89
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.89
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.88
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.88
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.87
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.87
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.87
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.87
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.85
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.85
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.85
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.85
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.85
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.84
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.84
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.84
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.84
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.84
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.82
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.81
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.81
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.8
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.79
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.79
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.78
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.77
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.76
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.76
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.76
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.72
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.72
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.69
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.68
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.68
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.65
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.65
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.65
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.65
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.64
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.62
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.62
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.6
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.57
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.55
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.55
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.54
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.54
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.52
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.52
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.5
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.48
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.43
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.42
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.42
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.41
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.4
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.39
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.37
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.37
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.36
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.34
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.33
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.31
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.3
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.3
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.29
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.26
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.25
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.23
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.22
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.21
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.19
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.19
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.18
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.14
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.03
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.02
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.93
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.85
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.84
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.83
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.79
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.78
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.78
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.72
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.7
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.65
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.61
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.6
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.59
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.48
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.45
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.41
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.41
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.33
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.29
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.23
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.23
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.21
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.19
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.1
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.09
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.08
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.08
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.06
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.05
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	97.99
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.98
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.98
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.97
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	97.97
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	97.93
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.92
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.9
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.85
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.82
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.82
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.7
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.68
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.67
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.67
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.65
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.62
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	97.56
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.52
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.49
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.47
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.39
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.35
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.33
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.32
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.25
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.2
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.17
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.16
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.15
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.06
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.01
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.98
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.95
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.9
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.78
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.7
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.65
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.56
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.53
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.5
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.49
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.44
3v65_B	386	Low-density lipoprotein receptor-related protein;	96.38
3v9f_A	781	Two-component system sensor histidine kinase/RESP	96.37
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.35
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.29
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.06
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.03
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	95.94
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	95.85
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	95.75
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.67
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	95.4
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.39
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.21
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.06
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.01
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.82
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.68
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	94.55
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	94.36
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.35
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	94.35
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.27
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.15
3kya_A	496	Putative phosphatase; structural genomics, joint c	93.98
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	93.92
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	93.84
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.76
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	93.72
3kya_A	496	Putative phosphatase; structural genomics, joint c	93.5
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	93.44
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	93.13
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	93.13
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	92.97
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.94
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	92.86
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	92.33
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	92.05
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	87.67
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	87.51
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	86.16
2cn3_A	737	Xyloglucanase, beta-1,4-xyloglucan hydrolase; glyc	85.03
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	85.01
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	82.71
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	81.28
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	81.1

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7e-50  Score=354.59  Aligned_cols=301  Identities=62%  Similarity=1.137  Sum_probs=228.9

Q ss_pred             CcccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC
Q psy2762           1 MVSQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG   80 (318)
Q Consensus         1 ~~~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~   80 (318)
                      |...+..+..||++.|++++|+|+|++|+||+.|++|+|||+...         ....+.++++|.+.|++++|++|.++
T Consensus         1 ~~~~~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~---------~~~~~~~l~gH~~~V~~v~~~~~~~~   71 (316)
T 3bg1_A            1 MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG---------GQILIADLRGHEGPVWQVAWAHPMYG   71 (316)
T ss_dssp             -------------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT---------EEEEEEEEECCSSCEEEEEECCGGGS
T ss_pred             CcceeeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC---------CcEEEEEEcCCCccEEEEEeCCCCCC
Confidence            344566778899999999999999999999999999999998632         12357789999999999999765458


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccc
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHT  159 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~  159 (318)
                      ++|+||+.|++|++||+.++.+.....+.+|...|++++|+|+..+.++++|+.|++|++|++.... .+. ...+.+|.
T Consensus        72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~~h~  150 (316)
T 3bg1_A           72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG-QWEVKKINNAHT  150 (316)
T ss_dssp             SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS-CEEECCBTTSSS
T ss_pred             CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC-Ccceeeeecccc
Confidence            9999999999999999987654455667889999999999998656789999999999999985432 122 22345899


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      .++..++|+|+.................+.+||+|+.|++|+|||+... .+.....+.+|..+|++|+|+|+...++.+
T Consensus       151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~  230 (316)
T 3bg1_A          151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST  230 (316)
T ss_dssp             SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred             CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence            9999999999742211111110011111358999999999999998743 334556789999999999999974333579


Q ss_pred             EEEEeCCCeEEEEEcCCCc--ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         239 IASCSQDRKVIIWTSNDYV--TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~--~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      |+|++.|++|+||++....  .+....+..|...|++++|+|+|++||+++.|++|+||+....|+|.++.++..
T Consensus       231 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~  305 (316)
T 3bg1_A          231 IASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK  305 (316)
T ss_dssp             EEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred             EEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence            9999999999999987621  122334567889999999999999999999999999999998999999998875

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=3.9e-48  Score=340.33  Aligned_cols=288  Identities=47%  Similarity=0.916  Sum_probs=226.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..||++.|++++|+|+|++|+||+.|++|+|||++..         ..+++.++.+|.++|++++|+++.++++||||+
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~---------~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s   74 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCS   74 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS---------CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC---------CcEEEEEEccccCCeEEEEecCCCcCCEEEEEc
Confidence            45799999999999999999999999999999998621         235678899999999999997654589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|+|||+.++.......+.+|...|.+++|+|++.+.++++++.|++|++|++..... .....+.+|..++.+++|
T Consensus        75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-~~~~~~~~h~~~v~~~~~  153 (297)
T 2pm7_B           75 YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASW  153 (297)
T ss_dssp             TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-BCCEEEECCSSCEEEEEE
T ss_pred             CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-eeeeeeecccCccceEee
Confidence            9999999999876543445567899999999999975467899999999999999854421 223445689999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|+.....  . . ......+.+||+|+.|++|+|||+..++  ......+.+|..+|++|+|+|+. ..+.+|+|+|.|
T Consensus       154 ~p~~~~~~--~-~-~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~-~~~~~las~s~D  228 (297)
T 2pm7_B          154 APATIEED--G-E-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYMASVSQD  228 (297)
T ss_dssp             CCCC----------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC-SSSEEEEEEETT
T ss_pred             cCCccccc--c-c-CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC-CCceEEEEEECC
Confidence            99631100  0 0 0000113589999999999999987653  33456788999999999999962 115799999999


Q ss_pred             CeEEEEEcCCCc-ceeeEEe--eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762         246 RKVIIWTSNDYV-TWTPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       246 ~~i~vw~~~~~~-~~~~~~~--~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      ++|+||++.... .+....+  ..|...|++++|+|+|++||+++.|++|+||+.+..|.|+++.+|.
T Consensus       229 ~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~~  296 (297)
T 2pm7_B          229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH  296 (297)
T ss_dssp             SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC----
T ss_pred             CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEeccccc
Confidence            999999987632 1222233  4577899999999999999999999999999999999999988763

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.9e-44  Score=315.83  Aligned_cols=260  Identities=16%  Similarity=0.195  Sum_probs=220.0

Q ss_pred             ccceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           3 SQLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         3 ~~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      ..+.+.+.+|.+.|++++|+|+|++|++|+.||+|+|||+.           ++..+..+.+|..+|.++.|++  ++++
T Consensus         3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-----------~~~~~~~~~~~~~~v~~~~~~~--~~~~   69 (304)
T 2ynn_A            3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-----------TQVEVRSIQVTETPVRAGKFIA--RKNW   69 (304)
T ss_dssp             CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEEG--GGTE
T ss_pred             ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----------CCceeEEeeccCCcEEEEEEeC--CCCE
Confidence            34566778999999999999999999999999999999996           3567889999999999999974  5899


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      |++|+.|++|++||+.+++.  ...+.+|...|.+++|+|+  +.++++|+.|++|++||+....  .....+.+|...|
T Consensus        70 l~s~s~d~~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v  143 (304)
T 2ynn_A           70 IIVGSDDFRIRVFNYNTGEK--VVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFV  143 (304)
T ss_dssp             EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCE
T ss_pred             EEEECCCCEEEEEECCCCcE--EEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcE
Confidence            99999999999999998864  4456789999999999998  6789999999999999985442  1234456899999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      .+++|+|..                +..||+|+.|++|+|||+....... ....+|...|..+.|+|.  .++.+|+++
T Consensus       144 ~~v~~~p~~----------------~~~l~sgs~D~~v~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~--~~~~~l~s~  204 (304)
T 2ynn_A          144 MCVAFNPKD----------------PSTFASGCLDRTVKVWSLGQSTPNF-TLTTGQERGVNYVDYYPL--PDKPYMITA  204 (304)
T ss_dssp             EEEEECTTC----------------TTEEEEEETTSEEEEEETTCSSCSE-EEECCCTTCEEEEEECCS--TTCCEEEEE
T ss_pred             EEEEECCCC----------------CCEEEEEeCCCeEEEEECCCCCccc-eeccCCcCcEEEEEEEEc--CCCCEEEEE
Confidence            999999952                3689999999999999987654322 223467788999999984  246799999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +.|++|+|||+....  ....+.+|...|..++|+|++++|++++.||+|+|||..+...
T Consensus       205 s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~  262 (304)
T 2ynn_A          205 SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV  262 (304)
T ss_dssp             ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred             cCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence            999999999998754  3456778999999999999999999999999999999776543

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.6e-43  Score=314.43  Aligned_cols=261  Identities=26%  Similarity=0.459  Sum_probs=212.4

Q ss_pred             ecCCCcc-eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHED-MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ...+|.+ .|.+++|+|+|++|++|+.|++|+|||+...         ..... ....+|.+.|.+++|++  ++++||+
T Consensus        10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~---------~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s   78 (345)
T 3fm0_A           10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD---------SWICKSVLSEGHQRTVRKVAWSP--CGNYLAS   78 (345)
T ss_dssp             EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT---------EEEEEEEECSSCSSCEEEEEECT--TSSEEEE
T ss_pred             eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC---------cceeeeeeccccCCcEEEEEECC--CCCEEEE
Confidence            3468988 9999999999999999999999999998632         11112 23468999999999974  5899999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      |+.|++|+|||+..+.......+.+|...|.+++|+|+  +.+|++|+.|++|++|++...........+.+|...|..+
T Consensus        79 ~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~  156 (345)
T 3fm0_A           79 ASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV  156 (345)
T ss_dssp             EETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred             EECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC--CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE
Confidence            99999999999887765566778899999999999998  7799999999999999986543222234456899999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|+|+                 +.+||+|+.|++|++||...+++.....+.+|...|++|+|+|+    +.+|++++.|
T Consensus       157 ~~~p~-----------------~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~----g~~l~s~s~D  215 (345)
T 3fm0_A          157 VWHPS-----------------QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS----GQRLASCSDD  215 (345)
T ss_dssp             EECSS-----------------SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT----SSEEEEEETT
T ss_pred             EECCC-----------------CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC----CCEEEEEeCC
Confidence            99997                 46899999999999999988876667788999999999999996    8899999999


Q ss_pred             CeEEEEEcCCCc--------------------------------------------------cee---------------
Q psy2762         246 RKVIIWTSNDYV--------------------------------------------------TWT---------------  260 (318)
Q Consensus       246 ~~i~vw~~~~~~--------------------------------------------------~~~---------------  260 (318)
                      ++|+||+.....                                                  .|.               
T Consensus       216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~  295 (345)
T 3fm0_A          216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLT  295 (345)
T ss_dssp             SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEE
T ss_pred             CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEE
Confidence            999999852100                                                  000               


Q ss_pred             eEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCCc
Q psy2762         261 PFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       261 ~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .....+|...|++|+|+|++ .+|||++.||+|+||+......
T Consensus       296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~  338 (345)
T 3fm0_A          296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG  338 (345)
T ss_dssp             EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred             eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence            00112567889999999998 4999999999999999877543

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.4e-42  Score=318.49  Aligned_cols=257  Identities=21%  Similarity=0.363  Sum_probs=220.7

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||.+.|++++|+|++.+|+||+.|++|+|||+.           ++..+.++++|.+.|++++|++  ++++|++|+
T Consensus       103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~-----------~~~~~~~l~~h~~~V~~v~~~~--~~~~l~sgs  169 (410)
T 1vyh_C          103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE-----------TGDFERTLKGHTDSVQDISFDH--SGKLLASCS  169 (410)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETT-----------TCCCCEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----------CCcEEEEEeccCCcEEEEEEcC--CCCEEEEEe
Confidence            456999999999999999999999999999999986           3456788999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|+|||+.+.+  +...+.+|...|.+++|+|+  +.++++|+.|++|++||+..+.   ....+.+|...+..+.|
T Consensus       170 ~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~  242 (410)
T 1vyh_C          170 ADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRP  242 (410)
T ss_dssp             TTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEE
T ss_pred             CCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEeCCCccEEEEEE
Confidence            99999999998776  44567789999999999998  6789999999999999985443   34566789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCC-------------
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGL-------------  234 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-------------  234 (318)
                      +|+                 +.+|++|+.|++|++||+.++++  ...+.+|...|.+++|+|+...             
T Consensus       243 ~~~-----------------g~~l~s~s~D~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~  303 (410)
T 1vyh_C          243 NQD-----------------GTLIASCSNDQTVRVWVVATKEC--KAELREHRHVVECISWAPESSYSSISEATGSETKK  303 (410)
T ss_dssp             CTT-----------------SSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred             CCC-----------------CCEEEEEcCCCeEEEEECCCCce--eeEecCCCceEEEEEEcCcccccchhhhccccccc
Confidence            997                 47899999999999999988764  4567899999999999996321             


Q ss_pred             ---CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         235 ---SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       235 ---~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                         .+.+|++++.|++|++||+....  ....+.+|...|.+++|+|+|++|++++.|++|+|||...+.....
T Consensus       304 ~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~  375 (410)
T 1vyh_C          304 SGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT  375 (410)
T ss_dssp             ----CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEE
T ss_pred             cCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence               25689999999999999998754  3455678999999999999999999999999999999876544443

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.1e-42  Score=305.52  Aligned_cols=251  Identities=22%  Similarity=0.307  Sum_probs=213.1

Q ss_pred             eecCCCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           7 LVDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      +...+|++.|.+++|+|+    +.+|+|||.|++|+|||+...         ......++.+|...|.+++|++  ++.+
T Consensus        26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~---------~~~~~~~l~gh~~~v~~~~~~~--~~~~   94 (321)
T 3ow8_A           26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE---------RLDLQWSLEGHQLGVVSVDISH--TLPI   94 (321)
T ss_dssp             EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSSCEEEEEECS--SSSE
T ss_pred             eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC---------CeeeeeeeccCCCCEEEEEECC--CCCE
Confidence            345799999999999875    679999999999999998632         2234567899999999999974  4889


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      ++|++.|++|++||+.+++.  ...+..|...+.+++|+|+  +.++++++.|+.|++|+.....   ....+..|...+
T Consensus        95 l~s~s~D~~i~lWd~~~~~~--~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~---~~~~~~~~~~~v  167 (321)
T 3ow8_A           95 AASSSLDAHIRLWDLENGKQ--IKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGK---KEYSLDTRGKFI  167 (321)
T ss_dssp             EEEEETTSEEEEEETTTTEE--EEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCS---EEEEEECSSSCE
T ss_pred             EEEEeCCCcEEEEECCCCCE--EEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCc---eeEEecCCCceE
Confidence            99999999999999998764  3455678889999999998  7799999999999999975443   234455788889


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      .+++|+|+                 +++||+|+.|+.|+|||+.+++.  ...+++|...|++++|+|+    +.+|+++
T Consensus       168 ~~~~~spd-----------------g~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd----~~~l~s~  224 (321)
T 3ow8_A          168 LSIAYSPD-----------------GKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPD----SQLLVTA  224 (321)
T ss_dssp             EEEEECTT-----------------SSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTT----SCEEEEE
T ss_pred             EEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCC----CCEEEEE
Confidence            99999997                 57899999999999999988864  4567899999999999996    7899999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +.|++|+|||+....  ....+.+|...|.+++|+|+|++|++++.|++|+|||+..+
T Consensus       225 s~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~  280 (321)
T 3ow8_A          225 SDDGYIKIYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR  280 (321)
T ss_dssp             CTTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred             cCCCeEEEEECCCcc--eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence            999999999998654  24456789999999999999999999999999999998765

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.5e-42  Score=308.89  Aligned_cols=251  Identities=20%  Similarity=0.188  Sum_probs=201.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .|+..|++++|+|++ +|++|+.||+|+|||++...       ........+.+|.+.|++++|++  ++++|+||+.|+
T Consensus        80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~-------~~~~~~~~~~~H~~~V~~v~~sp--dg~~l~sgs~d~  149 (344)
T 4gqb_B           80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENE-------TLIVSKFCKYEHDDIVSTVSVLS--SGTQAVSGSKDI  149 (344)
T ss_dssp             EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTS-------SCEEEEEEEECCSSCEEEEEECT--TSSEEEEEETTS
T ss_pred             ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCC-------ceeEeeccccCCCCCEEEEEECC--CCCEEEEEeCCC
Confidence            356789999999985 68899999999999997431       01122345679999999999974  599999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--cccccccceeeeC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGCNAVSWG  168 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v~~~~~~  168 (318)
                      +|++||+.+++  ....+.+|...|.+++|+|++ ..++++++.|++|++||+.....   ...+  ..|...+.+++|+
T Consensus       150 ~i~iwd~~~~~--~~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~  223 (344)
T 4gqb_B          150 CIKVWDLAQQV--VLSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKP---ASQIGCSAPGYLPTSLAWH  223 (344)
T ss_dssp             CEEEEETTTTE--EEEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSC---EEECC----CCCEEEEEEC
T ss_pred             eEEEEECCCCc--EEEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccce---eeeeecceeeccceeeeec
Confidence            99999999876  445678999999999999985 35789999999999999865432   2233  2455568899999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+.                +++||+|+.|++|+|||++++++  ..++.+|...|++|+|+|+   ...+|+|+|.|++|
T Consensus       224 p~~----------------~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~---g~~~lasgs~D~~i  282 (344)
T 4gqb_B          224 PQQ----------------SEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPH---SVPFLASLSEDCSL  282 (344)
T ss_dssp             SSC----------------TTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEECSS---SSCCEEEEETTSCE
T ss_pred             CCC----------------CcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEEccC---CCeEEEEEeCCCeE
Confidence            863                46799999999999999987754  4567899999999999997   24689999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCCC
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +|||.....   ...+.+|.+.|.+|+|+|+|+ +|+|+|.|++|++|++....
T Consensus       283 ~vwd~~~~~---~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          283 AVLDSSLSE---LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             EEECTTCCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             EEEECCCCc---EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            999987643   345678999999999999986 57789999999999987643

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.5e-42  Score=303.81  Aligned_cols=245  Identities=22%  Similarity=0.399  Sum_probs=215.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||...|.+++|++++.+++|++.|++|+|||+.           .++.+..+..|...+++++|++  ++++|++++
T Consensus        75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~-----------~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~g~  141 (321)
T 3ow8_A           75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-----------NGKQIKSIDAGPVDAWTLAFSP--DSQYLATGT  141 (321)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCTTCCCCEEECT--TSSEEEEEC
T ss_pred             eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCCEEEEEeCCCccEEEEEECC--CCCEEEEEc
Confidence            457999999999999999999999999999999996           3567888999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++|++.+++.  ...+..|...|.+++|+|+  +.++++|+.|+.|++||+..+.   ....+.+|..+|.+++|
T Consensus       142 ~dg~v~i~~~~~~~~--~~~~~~~~~~v~~~~~spd--g~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~  214 (321)
T 3ow8_A          142 HVGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPD--GKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTF  214 (321)
T ss_dssp             TTSEEEEEETTTCSE--EEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEE
T ss_pred             CCCcEEEEEcCCCce--eEEecCCCceEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEE
Confidence            999999999988764  4456678889999999998  7899999999999999975432   34556789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+                 +.+|++|+.|++|+|||++.++.  ...+.+|...|.+++|+|+    +.+|++++.|++
T Consensus       215 spd-----------------~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~----~~~l~s~s~D~~  271 (321)
T 3ow8_A          215 SPD-----------------SQLLVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPD----DTHFVSSSSDKS  271 (321)
T ss_dssp             CTT-----------------SCEEEEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT----SSEEEEEETTSC
T ss_pred             cCC-----------------CCEEEEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEECCC----CCEEEEEeCCCc
Confidence            997                 47899999999999999987754  4567899999999999996    789999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |+|||+.+..  ....+..|.+.|++++|+|+|++|++++.|++|+|||.
T Consensus       272 v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          272 VKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             EEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             EEEEeCCCCE--EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            9999998754  34456678999999999999999999999999999984

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=7.2e-42  Score=313.80  Aligned_cols=263  Identities=24%  Similarity=0.404  Sum_probs=218.0

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ....||.+.|++++|+|+|++|++|+.|++|+|||+.           .+.++.++.+|...|.+++|++  ++++|+||
T Consensus       144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~-----------~~~~~~~~~~h~~~V~~v~~~p--~~~~l~s~  210 (410)
T 1vyh_C          144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ-----------GFECIRTMHGHDHNVSSVSIMP--NGDHIVSA  210 (410)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-----------SSCEEECCCCCSSCEEEEEECS--SSSEEEEE
T ss_pred             EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-----------CCceeEEEcCCCCCEEEEEEeC--CCCEEEEE
Confidence            3557999999999999999999999999999999986           3467889999999999999964  58999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.|++|++||+.++..  ...+.+|...|.+++++|+  +.++++|+.|++|++||+....   ....+.+|...+.+++
T Consensus       211 s~D~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~---~~~~~~~h~~~v~~~~  283 (410)
T 1vyh_C          211 SRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKE---CKAELREHRHVVECIS  283 (410)
T ss_dssp             ETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEE
T ss_pred             eCCCeEEEEECCCCcE--EEEEeCCCccEEEEEECCC--CCEEEEEcCCCeEEEEECCCCc---eeeEecCCCceEEEEE
Confidence            9999999999998864  3456789999999999998  7799999999999999975432   3445678999999999


Q ss_pred             eCCCCCCCccccccC---CCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         167 WGPGIGSLSELDLKG---SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~---~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      |+|+...........   ......+.+|++|+.|++|+|||+.++.+  ...+.+|..+|++++|+|+    +.+|++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~----g~~l~s~s  357 (410)
T 1vyh_C          284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSG----GKFILSCA  357 (410)
T ss_dssp             ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSCEEEEE
T ss_pred             EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCC----CCEEEEEe
Confidence            999642211111000   01111246899999999999999988864  4567899999999999996    88999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      .|++|++||......  ...+..|...|.+++|+|++++|++++.|++|+||+.
T Consensus       358 ~D~~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          358 DDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             TTTEEEEECCTTSCC--CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred             CCCeEEEEECCCCce--EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence            999999999976542  3556789999999999999999999999999999985

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2e-41  Score=300.60  Aligned_cols=261  Identities=21%  Similarity=0.316  Sum_probs=209.5

Q ss_pred             eeecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      ...+.||.+.|++++|+|++ ++|+|||.|++|++|++...      ....+..+.++++|...|++++|++  ++.+|+
T Consensus        10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~------~~~~~~~~~~~~~h~~~v~~~~~s~--dg~~l~   81 (319)
T 3frx_A           10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD------DQKFGVPVRSFKGHSHIVQDCTLTA--DGAYAL   81 (319)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEE------TTEEEEEEEEEECCSSCEEEEEECT--TSSEEE
T ss_pred             EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCC------CccccccceEEeCCcccEEEEEECC--CCCEEE
Confidence            34568999999999999965 89999999999999998521      0112456788999999999999974  589999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      ||+.|++|+|||+.+++.  ...+.+|...|.+++|+|+  +.++++|+.|++|++|++..    .....+.+|...+..
T Consensus        82 s~s~D~~v~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~  153 (319)
T 3frx_A           82 SASWDKTLRLWDVATGET--YQRFVGHKSDVMSVDIDKK--ASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQ  153 (319)
T ss_dssp             EEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECTT--SCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEE
T ss_pred             EEeCCCEEEEEECCCCCe--eEEEccCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEE
Confidence            999999999999998864  4456789999999999998  67899999999999999732    134566789999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +.|+|....           ...+..|++++.|++|++||+...+.  ...+.+|...|++++|+|+    +.+|++++.
T Consensus       154 ~~~~~~~~~-----------~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~----g~~l~s~~~  216 (319)
T 3frx_A          154 VRVVPNEKA-----------DDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPD----GTLIASAGK  216 (319)
T ss_dssp             EEECCC-----------------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTT----SSEEEEEET
T ss_pred             EEEccCCCC-----------CCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCC----CCEEEEEeC
Confidence            999985310           01135799999999999999987754  4567899999999999996    889999999


Q ss_pred             CCeEEEEEcCCCcceee--------------------------------------EEe--------eecCCcEEEEEEcC
Q psy2762         245 DRKVIIWTSNDYVTWTP--------------------------------------FIM--------NTFDDVVWNVSWSL  278 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~--------------------------------------~~~--------~~~~~~v~~v~~sp  278 (318)
                      |++|+|||+........                                      ..+        ..+...|.+++|+|
T Consensus       217 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp  296 (319)
T 3frx_A          217 DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA  296 (319)
T ss_dssp             TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred             CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECC
Confidence            99999999876421000                                      000        01234688899999


Q ss_pred             CCCEEEEEeCCCeEEEEEECC
Q psy2762         279 TGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       279 dg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ||++|++++.|++|+||++.+
T Consensus       297 dg~~l~sg~~Dg~i~vWd~~t  317 (319)
T 3frx_A          297 DGQTLFAGYTDNVIRVWQVMT  317 (319)
T ss_dssp             TSSEEEEEETTSCEEEEEEEE
T ss_pred             CCCEEEEeecCceEEEEEEee
Confidence            999999999999999999765

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.9e-41  Score=303.96  Aligned_cols=260  Identities=15%  Similarity=0.195  Sum_probs=211.1

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCC-----------------------------------
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDS-----------------------------------   51 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~-----------------------------------   51 (318)
                      +.+.||.+.|++++|+|++++|+|||.|++|+|||..........                                   
T Consensus        58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~  137 (354)
T 2pbi_B           58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF  137 (354)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred             EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence            456799999999999999999999999999999997532110000                                   


Q ss_pred             --CCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEE
Q psy2762          52 --HSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL  129 (318)
Q Consensus        52 --~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~l  129 (318)
                        ..........+.+|.+.|.+++|++  ++..|++++.|++|++||+.+++.  ...+.+|...|.+++|+|...+.++
T Consensus       138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l  213 (354)
T 2pbi_B          138 DKNENMAAKKKSVAMHTNYLSACSFTN--SDMQILTASGDGTCALWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTF  213 (354)
T ss_dssp             CTTCCSGGGCEEEEECSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEE
T ss_pred             cccccccccceeeeccCCcEEEEEEeC--CCCEEEEEeCCCcEEEEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEE
Confidence              0000012345667999999999964  478999999999999999998874  4456789999999999997556799


Q ss_pred             EEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe
Q psy2762         130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK  209 (318)
Q Consensus       130 asgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~  209 (318)
                      ++|+.|++|++||+....   ....+.+|...|.+++|+|+                 +.+|++|+.|++|+|||+..+.
T Consensus       214 ~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~-----------------~~~l~s~s~D~~v~lwd~~~~~  273 (354)
T 2pbi_B          214 VSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSVRYYPS-----------------GDAFASGSDDATCRLYDLRADR  273 (354)
T ss_dssp             EEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEETTTTE
T ss_pred             EEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEEEEeCC-----------------CCEEEEEeCCCeEEEEECCCCc
Confidence            999999999999985443   34556789999999999997                 4689999999999999998775


Q ss_pred             EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC
Q psy2762         210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       210 ~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D  289 (318)
                      .........+...+.+++|+|+    +.+|++++.|++|+|||+....  ....+.+|...|.+++|+|||++|++++.|
T Consensus       274 ~~~~~~~~~~~~~~~~~~~s~~----g~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l~~spdg~~l~sgs~D  347 (354)
T 2pbi_B          274 EVAIYSKESIIFGASSVDFSLS----GRLLFAGYNDYTINVWDVLKGS--RVSILFGHENRVSTLRVSPDGTAFCSGSWD  347 (354)
T ss_dssp             EEEEECCTTCCSCEEEEEECTT----SSEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             EEEEEcCCCcccceeEEEEeCC----CCEEEEEECCCcEEEEECCCCc--eEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence            4433333344567899999996    8899999999999999987654  245567899999999999999999999999


Q ss_pred             CeEEEEE
Q psy2762         290 NSVSLWK  296 (318)
Q Consensus       290 ~~v~iW~  296 (318)
                      ++|+||+
T Consensus       348 ~~v~vW~  354 (354)
T 2pbi_B          348 HTLRVWA  354 (354)
T ss_dssp             SEEEEEC
T ss_pred             CCEEecC
Confidence            9999995

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-41  Score=305.07  Aligned_cols=290  Identities=46%  Similarity=0.879  Sum_probs=230.3

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .+..||.+.|++++|+|++++|++|+.||+|+|||+...         .+..+..+.+|.+.|++++|+++.++.+|+++
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~   75 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASC   75 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT---------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC---------cceeeeEecCCCCcEEEEEeCCCCCCCEEEEe
Confidence            345699999999999999999999999999999999632         45677889999999999999765458999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      +.||+|++||+.+++......+..|...|.+++|+|+..+.++++++.|+.|++|++..... .....+..|..++.+++
T Consensus        76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~v~~~~  154 (379)
T 3jrp_A           76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSAS  154 (379)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-CCEEEEECCTTCEEEEE
T ss_pred             ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-eeeEEecCCCCceEEEE
Confidence            99999999999988755666777899999999999974356899999999999999865432 22345568999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      |+|.......   . ......+.+|++++.|+.|++||+..+.  ......+.+|...|++++|+|+.. .+.+|++++.
T Consensus       155 ~~~~~~~~~~---~-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~-~~~~l~s~~~  229 (379)
T 3jrp_A          155 WAPATIEEDG---E-HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQ  229 (379)
T ss_dssp             ECCCC--------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEET
T ss_pred             EcCccccccc---c-ccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC-CCCeEEEEeC
Confidence            9994110000   0 0000014689999999999999987653  334567789999999999999510 0689999999


Q ss_pred             CCeEEEEEcCCCcce-eeEEe--eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         245 DRKVIIWTSNDYVTW-TPFIM--NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       245 D~~i~vw~~~~~~~~-~~~~~--~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      |+.|+||++...... .....  ..+...|.+++|+|+|++|++++.||.|+||+++.++.|.++.++..
T Consensus       230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~  299 (379)
T 3jrp_A          230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQ  299 (379)
T ss_dssp             TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC-
T ss_pred             CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccccceec
Confidence            999999998875311 11122  23678999999999999999999999999999999999998877654

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=6e-41  Score=300.00  Aligned_cols=253  Identities=17%  Similarity=0.205  Sum_probs=212.5

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ..+.||.+.|++++|+|++++|+||+.||+|+|||+.           .+..+..+..|...|.+++|++  ++++|++|
T Consensus        49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~  115 (340)
T 1got_B           49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY-----------TTNKVHAIPLRSSWVMTCAYAP--SGNYVACG  115 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-----------TCCEEEEEECSSSCEEEEEECT--TSSEEEEE
T ss_pred             eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCCcceEeecCCccEEEEEECC--CCCEEEEE
Confidence            3567999999999999999999999999999999986           3456788899999999999974  58999999


Q ss_pred             ECCCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          87 SYDRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +.|+.|++|++.+..  ......+.+|...|.++.|+|+  + .+++++.|++|++||+....   ....+.+|...|.+
T Consensus       116 ~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~  189 (340)
T 1got_B          116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--N-QIVTSSGDTTCALWDIETGQ---QTTTFTGHTGDVMS  189 (340)
T ss_dssp             ETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET--T-EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEE
T ss_pred             eCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC--C-cEEEEECCCcEEEEECCCCc---EEEEEcCCCCceEE
Confidence            999999999987642  2344457789999999999987  4 48899999999999975432   34456689999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      ++|+|+                 +.+|++|+.|++|++||+.++..  ...+.+|...|++++|+|+    +.+|++++.
T Consensus       190 ~~~~~~-----------------~~~l~sg~~d~~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~----~~~l~s~s~  246 (340)
T 1got_B          190 LSLAPD-----------------TRLFVSGACDASAKLWDVREGMC--RQTFTGHESDINAICFFPN----GNAFATGSD  246 (340)
T ss_dssp             EEECTT-----------------SSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTT----SSEEEEEET
T ss_pred             EEECCC-----------------CCEEEEEeCCCcEEEEECCCCee--EEEEcCCcCCEEEEEEcCC----CCEEEEEcC
Confidence            999997                 46899999999999999988754  4567899999999999996    789999999


Q ss_pred             CCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         245 DRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       245 D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      |++|++||+.....  .....  .+...|.+++|+|+|++|++++.|+.|++||.......
T Consensus       247 d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~  305 (340)
T 1got_B          247 DATCRLFDLRADQE--LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA  305 (340)
T ss_dssp             TSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             CCcEEEEECCCCcE--EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence            99999999976432  11111  22347999999999999999999999999997765433

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-40  Score=296.26  Aligned_cols=263  Identities=24%  Similarity=0.415  Sum_probs=205.7

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cc-cccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KG-HSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~-h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.||++.|.+++|+|+  +|++|+.|++|+|||+...         ....+..+ .+ |.+.|++++|++  ++++||+
T Consensus         9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~---------~~~~~~~~~~~~h~~~v~~v~~sp--~~~~las   75 (330)
T 2hes_X            9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD---------DFTLIDVLDETAHKKAIRSVAWRP--HTSLLAA   75 (330)
T ss_dssp             EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS---------CCEEEEEECTTCCCSCEEEEEECT--TSSEEEE
T ss_pred             eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC---------CeEEEEEEecCCccCCEEEEEECC--CCCEEEE
Confidence            45699999999999988  9999999999999998632         22455566 44 999999999974  5899999


Q ss_pred             EECCCeEEEEeCCCC-----cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccc
Q psy2762          86 CSYDRKVIIWRGDNG-----NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHT  159 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~  159 (318)
                      |+.|++|+|||+...     .......+.+|...|.+++|+|+  +.+|++|+.|++|++||+....... ....+.+|.
T Consensus        76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~  153 (330)
T 2hes_X           76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHS  153 (330)
T ss_dssp             EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred             EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence            999999999998532     11244567789999999999998  7799999999999999984332222 234556899


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ..|.+++|+|+                 +.+|++|+.|++|+|||...+.......+.+|...|.+++|+|+.  .+.+|
T Consensus       154 ~~v~~v~~~p~-----------------~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~l  214 (330)
T 2hes_X          154 QDVKHVIWHPS-----------------EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE--GVFRL  214 (330)
T ss_dssp             SCEEEEEECSS-----------------SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS--SSCEE
T ss_pred             CceEEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC--CeeEE
Confidence            99999999997                 468999999999999998876555567789999999999999962  25689


Q ss_pred             EEEeCCCeEEEEEcCCCcc-----e-eeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         240 ASCSQDRKVIIWTSNDYVT-----W-TPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~-----~-~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      ++++.|++|+||++.....     + ....+.. |...|.+++|+|++ +|++++.||+|+||+... ++|++.
T Consensus       215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~-~~~~~~  286 (330)
T 2hes_X          215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD-GEWKVF  286 (330)
T ss_dssp             EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET-TEEEEE
T ss_pred             EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC-CceEEE
Confidence            9999999999999864310     0 1122333 78899999999776 889999999999999764 455443

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.5e-40  Score=294.45  Aligned_cols=286  Identities=29%  Similarity=0.567  Sum_probs=227.6

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      +..+..||++.|++++|+|++++|++|+.||+|+|||+...       ......+..+.+|.+.|++++|++..++.+|+
T Consensus         3 ~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~   75 (351)
T 3f3f_A            3 MQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD-------TSNWELSDSWRAHDSSIVAIDWASPEYGRIIA   75 (351)
T ss_dssp             CCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSS-------SCCEEEEEEEECCSSCEEEEEECCGGGCSEEE
T ss_pred             ccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCC-------CCcceecceeccCCCcEEEEEEcCCCCCCEEE
Confidence            34567899999999999999999999999999999999732       11225678889999999999997432589999


Q ss_pred             EEECCCeEEEEeCCCCc-------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee----
Q psy2762          85 SCSYDRKVIIWRGDNGN-------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR----  153 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~----  153 (318)
                      +++.|++|++||+..+.       ......+..|...|.+++|+|+..+.++++++.|+.|++||+..........    
T Consensus        76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  155 (351)
T 3f3f_A           76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE  155 (351)
T ss_dssp             EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE
T ss_pred             EEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc
Confidence            99999999999987652       1345567789999999999997435689999999999999986554211110    


Q ss_pred             ------eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEE
Q psy2762         154 ------KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVA  227 (318)
Q Consensus       154 ------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~  227 (318)
                            ....|...+.++.|+|+..              .+.+|++++.|+.+.+|+...++......+.+|...|++++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~p~~~--------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~  221 (351)
T 3f3f_A          156 MKVLSIPPANHLQSDFCLSWCPSRF--------------SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS  221 (351)
T ss_dssp             EESCSCCCSSCSCCCEEEEECCCSS--------------SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE
T ss_pred             ccccccccCCcccceeEEEeccCCC--------------CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE
Confidence                  0114667788999998521              13689999999999888877776656778889999999999


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcc--------------------------------------------eeeEE
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVT--------------------------------------------WTPFI  263 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~--------------------------------------------~~~~~  263 (318)
                      |+|++.....+|++++.|+.|++||+.....                                            .....
T Consensus       222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (351)
T 3f3f_A          222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE  301 (351)
T ss_dssp             ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred             ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence            9997211127999999999999999875310                                            11233


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      +..|...|.+++|+|+|++|++++.||.|+||+++.+++|+++..+..
T Consensus       302 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~  349 (351)
T 3f3f_A          302 HDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVITA  349 (351)
T ss_dssp             ECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC-
T ss_pred             EecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeehcc
Confidence            456788999999999999999999999999999999999999988753

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.6e-40  Score=297.18  Aligned_cols=248  Identities=16%  Similarity=0.249  Sum_probs=210.2

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|...|.+++|+|+|++|++|+.|++|+|||+....       ........+.+|.+.|.++.|.+   +..|++++.
T Consensus        93 ~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~s~  162 (340)
T 1got_B           93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE-------GNVRVSRELAGHTGYLSCCRFLD---DNQIVTSSG  162 (340)
T ss_dssp             EECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCS-------BSCEEEEEEECCSSCEEEEEEEE---TTEEEEEET
T ss_pred             eecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCC-------CcceeEEEecCCCccEEEEEECC---CCcEEEEEC
Confidence            35799999999999999999999999999999986320       12245678899999999999963   346999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |++|++||+.++..  ...+.+|...|.+++|+|+  +.++++|+.|++|++||+....   ....+.+|...|.+++|+
T Consensus       163 d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~  235 (340)
T 1got_B          163 DTTCALWDIETGQQ--TTTFTGHTGDVMSLSLAPD--TRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFF  235 (340)
T ss_dssp             TSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEEC
T ss_pred             CCcEEEEECCCCcE--EEEEcCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEc
Confidence            99999999988763  4467789999999999998  6789999999999999975432   345567899999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+                 +.+|++|+.|++|+|||+..++.........+...|++++|+|+    +.+|++++.|++|
T Consensus       236 p~-----------------~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~g~~d~~i  294 (340)
T 1got_B          236 PN-----------------GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS----GRLLLAGYDDFNC  294 (340)
T ss_dssp             TT-----------------SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT----SSEEEEEETTSEE
T ss_pred             CC-----------------CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC----CCEEEEECCCCeE
Confidence            97                 47899999999999999988765443333445567999999996    8899999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ++||.....  ....+.+|..+|.+++|+|||++|+|++.|++|+|||
T Consensus       295 ~vwd~~~~~--~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          295 NVWDALKAD--RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEETTTCC--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEcccCc--EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            999987654  3456778999999999999999999999999999996

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-40  Score=294.32  Aligned_cols=260  Identities=26%  Similarity=0.371  Sum_probs=197.4

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +|.+.|++++|+|++++|++|+.|++|+|||+....    ........+..+.+|.+.|++++|++  ++++||||+.|+
T Consensus        56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~----~~~~~~~~~~~~~~h~~~V~~v~~sp--~g~~las~s~D~  129 (330)
T 2hes_X           56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESA----DRTFEMDLLAIIEGHENEVKGVAWSN--DGYYLATCSRDK  129 (330)
T ss_dssp             CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-----------CCCEEEEEEC----CEEEEEECT--TSCEEEEEETTS
T ss_pred             CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCc----CccccceeEEEEcCCCCcEEEEEECC--CCCEEEEEeCCC
Confidence            499999999999999999999999999999985210    00012356788999999999999974  589999999999


Q ss_pred             eEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          91 KVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        91 ~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      +|++||+...  .......+.+|...|.+++|+|+  +.+|++++.|++|++|+...... .....+.+|...|.+++|+
T Consensus       130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~~~v~~~~~~  206 (330)
T 2hes_X          130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS--EALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHEGTVWSSDFD  206 (330)
T ss_dssp             CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred             EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC--CCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCCCcEEEEEec
Confidence            9999998432  22345567889999999999998  67899999999999999754321 1244566899999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC------eEEEEEEccc-CCCCeeEEEEccCCCCCccEEEE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------KWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      |+..               +.+|++|+.|++|+|||+..+      ++.....+.+ |...|++++|+|+     .+|++
T Consensus       207 ~~~~---------------~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~-----~~l~s  266 (330)
T 2hes_X          207 KTEG---------------VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFN-----GLIAS  266 (330)
T ss_dssp             CSSS---------------SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTT-----SCEEE
T ss_pred             CCCC---------------eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCC-----CEEEE
Confidence            9621               357999999999999997643      1123344555 9999999999974     47999


Q ss_pred             EeCCCeEEEEEcCCCcceee-EEeeecCC-cEEEEEEcC--CCCEEEEEeCCCeEEEEEECC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTP-FIMNTFDD-VVWNVSWSL--TGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~-~~~~~~~~-~v~~v~~sp--dg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++.|++|+||+......... .....|.. .|..++|+|  ++++||+++.||+|+||+++.
T Consensus       267 ~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          267 VGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            99999999999865321111 12245666 899999999  799999999999999999653

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.1e-41  Score=302.74  Aligned_cols=258  Identities=19%  Similarity=0.161  Sum_probs=200.7

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|...|++++|+|++.+| +++.||+|+|||+.....       .........+|.+.|++++|++  ++++|++|+.
T Consensus        90 ~~~~~~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~-------~~~~~~~~~~h~~~V~~v~~sp--dg~~l~sgs~  159 (357)
T 4g56_B           90 GVQTEAGVTDVAWVSEKGIL-VASDSGAVELWEILEKES-------LLVNKFAKYEHDDIVKTLSVFS--DGTQAVSGGK  159 (357)
T ss_dssp             EEECSSCEEEEEEETTTEEE-EEETTSCEEEC---------------CCCCEEECCCSSCEEEEEECS--SSSEEEEEET
T ss_pred             cCCCCCCEEEEEEcCCCCEE-EEECCCEEEEeeccccce-------eEEEeeccCCCCCCEEEEEECC--CCCEEEEEeC
Confidence            34789999999999998655 578899999999863200       0011234568999999999974  5899999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |++|++||+.+++  ....+.+|...|++++|+|+. ..++++++.|++|++||+...... .......|...+.+++|+
T Consensus       160 dg~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~v~~v~~s  235 (357)
T 4g56_B          160 DFSVKVWDLSQKA--VLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPA-TRIDFCASDTIPTSVTWH  235 (357)
T ss_dssp             TSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCB-CBCCCTTCCSCEEEEEEC
T ss_pred             CCeEEEEECCCCc--EEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCcee-eeeeeccccccccchhhh
Confidence            9999999998876  444677899999999999985 357889999999999997554321 112233566778999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+.                +.+||+|+.|+.|+|||+.+++.  ...+.+|...|++|+|+|+   ++.+|++++.|++|
T Consensus       236 p~~----------------~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~---~~~~lasgs~D~~i  294 (357)
T 4g56_B          236 PEK----------------DDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYH---SSPFLASISEDCTV  294 (357)
T ss_dssp             TTS----------------TTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSS---SSCCEEEEETTSCE
T ss_pred             hcc----------------cceEEEeecccceeEEECCCCcE--eEEEeccceeEEEEEEcCC---CCCEEEEEeCCCEE
Confidence            963                36799999999999999987753  4567899999999999997   35689999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      +|||+....   .....+|.+.|.+|+|+| |+++|+|++.|++|++|++...++-.
T Consensus       295 ~iwd~~~~~---~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~  348 (357)
T 4g56_B          295 AVLDADFSE---VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE  348 (357)
T ss_dssp             EEECTTSCE---EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred             EEEECCCCc---EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence            999987643   333457899999999999 89999999999999999987766544

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.3e-40  Score=300.69  Aligned_cols=266  Identities=17%  Similarity=0.244  Sum_probs=204.2

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCC-----CC------CCCcc-------------------
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKD-----DS------HSQKG-------------------   56 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~-----~~------~~~~~-------------------   56 (318)
                      +.+.||.+.|++++|+|++++|+|||.|++|+|||+.......     ..      -...+                   
T Consensus        60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~  139 (380)
T 3iz6_a           60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS  139 (380)
T ss_dssp             EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred             ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence            3568999999999999999999999999999999986321100     00      00000                   


Q ss_pred             --------eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCC
Q psy2762          57 --------TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEF  125 (318)
Q Consensus        57 --------~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~  125 (318)
                              .....+.+|.+.|.++.|.+ ..+.+|+||+.|++|++||+.++.....+..   .+|...|.+++|+|.+ 
T Consensus       140 ~~~~~~~~~~~~~~~gh~~~v~~~~~~~-~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-  217 (380)
T 3iz6_a          140 QADRDGNMPVSRVLTGHKGYASSCQYVP-DQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN-  217 (380)
T ss_dssp             CSSCCCSSTTCCBCCCCSSCCCCCBCCS-SSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS-
T ss_pred             CccccCCccceeeccCCCcceEEEEEec-CCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC-
Confidence                    01223567777777777753 3466799999999999999988765443321   4688999999998843 


Q ss_pred             CcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762         126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ  205 (318)
Q Consensus       126 ~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~  205 (318)
                      +.++++|+.|++|++||+....  .....+.+|...|.+++|+|+                 +.+|++|+.|++|+|||+
T Consensus       218 ~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~p~-----------------~~~l~s~s~D~~i~lwd~  278 (380)
T 3iz6_a          218 ANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFFPD-----------------GQRFGTGSDDGTCRLFDM  278 (380)
T ss_dssp             CCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEECTT-----------------SSEEEEECSSSCEEEEET
T ss_pred             CCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEecC-----------------CCeEEEEcCCCeEEEEEC
Confidence            6789999999999999985332  134556789999999999997                 478999999999999999


Q ss_pred             cCCeEEEEEEc-----ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe----eecCCcEEEEEE
Q psy2762         206 EGDKWIEETKL-----ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM----NTFDDVVWNVSW  276 (318)
Q Consensus       206 ~~~~~~~~~~~-----~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~----~~~~~~v~~v~~  276 (318)
                      .+++.......     ..+...|++++|+|+    +.+|++++.|+.|++||......  ...+    .+|.+.|.+++|
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~l~~  352 (380)
T 3iz6_a          279 RTGHQLQVYNREPDRNDNELPIVTSVAFSIS----GRLLFAGYSNGDCYVWDTLLAEM--VLNLGTLQNSHEGRISCLGL  352 (380)
T ss_dssp             TTTEEEEEECCCCSSSCCSSCSCSEEEECSS----SSEEEEECTTSCEEEEETTTCCE--EEEECCSCSSCCCCCCEEEE
T ss_pred             CCCcEEEEecccccccccccCceEEEEECCC----CCEEEEEECCCCEEEEECCCCce--EEEEecccCCCCCceEEEEE
Confidence            98865433221     122335899999996    88999999999999999876432  2222    468899999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEEECC
Q psy2762         277 SLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       277 spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +|||++|+||+.|++|+||++..
T Consensus       353 s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          353 SSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             CSSSSEEEEECTTSCEEEEECCS
T ss_pred             CCCCCEEEEeeCCCCEEEEecCC
Confidence            99999999999999999999754

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.8e-39  Score=288.17  Aligned_cols=260  Identities=19%  Similarity=0.277  Sum_probs=203.5

Q ss_pred             eeecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      ...+.||++.|++++|+|+ +++|+|||.|++|+|||+...      ....+....++++|.+.|.++.|++  ++++|+
T Consensus        31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~------~~~~~~~~~~l~~h~~~V~~~~~s~--dg~~l~  102 (340)
T 4aow_A           31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD------ETNYGIPQRALRGHSHFVSDVVISS--DGQFAL  102 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCS------SSCSEEEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred             EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC------CcccceeeEEEeCCCCCEEEEEECC--CCCEEE
Confidence            3357899999999999997 689999999999999998632      1123456788999999999999974  588888


Q ss_pred             EEECCCeEEEEeCCCCc-----------------------------------------EEEEEEecCCCcCeEEEEeeCC
Q psy2762          85 SCSYDRKVIIWRGDNGN-----------------------------------------WFKYYEYNNHDSSVNSIAWAPK  123 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~-----------------------------------------~~~~~~~~~h~~~v~~v~~~p~  123 (318)
                      +++.|+.|++|+.....                                         ........+|...+.+++|+++
T Consensus       103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~  182 (340)
T 4aow_A          103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN  182 (340)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred             EEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence            88888888888764211                                         1122234567888999999998


Q ss_pred             CCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762         124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW  203 (318)
Q Consensus       124 ~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw  203 (318)
                      ....++++++.|+.|++|+.....   ....+.+|..+|.+++|+|+                 +.+|++|+.|++|+||
T Consensus       183 ~~~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~~-----------------~~~l~s~s~Dg~i~iw  242 (340)
T 4aow_A          183 SSNPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSPD-----------------GSLCASGGKDGQAMLW  242 (340)
T ss_dssp             SSSCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTCEEEEE
T ss_pred             CCCcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECCC-----------------CCEEEEEeCCCeEEEE
Confidence            767789999999999999974432   34456689999999999997                 4789999999999999


Q ss_pred             EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCccee-------eEEeeecCCcEEEEEE
Q psy2762         204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT-------PFIMNTFDDVVWNVSW  276 (318)
Q Consensus       204 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~-------~~~~~~~~~~v~~v~~  276 (318)
                      |+.+.+..  ..+. +...|.+++|+|+    + ++++++.|+.|+|||+.......       ......|...|.+++|
T Consensus       243 d~~~~~~~--~~~~-~~~~v~~~~~~~~----~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~  314 (340)
T 4aow_A          243 DLNEGKHL--YTLD-GGDIINALCFSPN----R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW  314 (340)
T ss_dssp             ETTTTEEE--EEEE-CSSCEEEEEECSS----S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred             EeccCcee--eeec-CCceEEeeecCCC----C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence            99887643  3344 4467999999995    3 56778889999999987643110       1122356789999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         277 SLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       277 spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +|||++|++|+.||+|+|||+.+|.
T Consensus       315 s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          315 SADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             CTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             CCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            9999999999999999999998864

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=8.4e-41  Score=299.93  Aligned_cols=260  Identities=16%  Similarity=0.156  Sum_probs=200.5

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCc-CCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNL-KKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..|+..|.+++|+|||++|++++ |+++|+||..... .........+. ......|...|++++|++   ...|++|+.
T Consensus        27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~---d~~l~~~s~  101 (344)
T 4gqb_B           27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGF-CSAGVQTEAGVADLTWVG---ERGILVASD  101 (344)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGG-CSEEEEESSCEEEEEEET---TTEEEEEET
T ss_pred             ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcce-eeeeeccCCCEEEEEEeC---CCeEEEEEC
Confidence            46788999999999999999888 8899999742100 00000000111 122234678899999974   357899999


Q ss_pred             CCeEEEEeCCCCcEEE--EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          89 DRKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      ||+|+|||+.+++...  ...+.+|...|++|+|+|+  +.+|++|+.|++|++||+..+.   .+..+.+|...|.+++
T Consensus       102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~---~~~~~~~h~~~V~~~~  176 (344)
T 4gqb_B          102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQV---VLSSYRAHAAQVTCVA  176 (344)
T ss_dssp             TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEE
T ss_pred             CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCcCCceEEEE
Confidence            9999999998775432  3345689999999999998  7899999999999999975432   3456678999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|+.                ...|++++.|++|+|||+++++.........|...+++++|+|+   ++.+|++|+.|+
T Consensus       177 ~~~~~----------------~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~l~sg~~dg  237 (344)
T 4gqb_B          177 ASPHK----------------DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ---QSEVFVFGDENG  237 (344)
T ss_dssp             ECSSC----------------TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS---CTTEEEEEETTS
T ss_pred             ecCCC----------------CCceeeeccccccccccccccceeeeeecceeeccceeeeecCC---CCcceEEeccCC
Confidence            99963                24789999999999999988765444444567778999999996   577899999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|+|||+....  ....+.+|...|.+++|+|+| ++||+++.|++|+|||.+.+
T Consensus       238 ~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~  290 (344)
T 4gqb_B          238 TVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS  290 (344)
T ss_dssp             EEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred             cEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence            99999998754  245567899999999999998 57999999999999997664

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=7.7e-40  Score=314.99  Aligned_cols=271  Identities=21%  Similarity=0.280  Sum_probs=207.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-------ccccCeEEEEecCCCCC
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-------GHSGPVWQVAWAHPQFG   80 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-------~h~~~V~~v~~~~~~~~   80 (318)
                      ...+|.+.|++++|+|+|++|+||+.|++|+|||+.           .++.+..+.       +|.+.|++++|++  ++
T Consensus       185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~-----------~g~~~~~~~~~~~~~~~h~~~V~~v~~sp--dg  251 (611)
T 1nr0_A          185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV-----------DGTKTGVFEDDSLKNVAHSGSVFGLTWSP--DG  251 (611)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEECBCTTSSSCSSSSCEEEEEECT--TS
T ss_pred             eeccccCceEEEEECCCCCEEEEEECCCcEEEEECC-----------CCcEeeeeccccccccccCCCEEEEEECC--CC
Confidence            457999999999999999999999999999999986           245566674       7999999999974  58


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEE-----------------------------------------EEecCCCcCeEEEE
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKY-----------------------------------------YEYNNHDSSVNSIA  119 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~-----------------------------------------~~~~~h~~~v~~v~  119 (318)
                      ++|+|++.|++|+|||+.+++....                                         ..+.+|...|.+++
T Consensus       252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~  331 (611)
T 1nr0_A          252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS  331 (611)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence            9999999999999999987654322                                         23457999999999


Q ss_pred             eeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeeeCCCCCCCc--------cccc-----------
Q psy2762         120 WAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLS--------ELDL-----------  179 (318)
Q Consensus       120 ~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~--------~~~~-----------  179 (318)
                      |+|+  +.++++++.|++|++||......   ...+ .+|...+..++|+|+.....        ..+.           
T Consensus       332 ~spd--g~~l~s~s~D~~v~~Wd~~~~~~---~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~  406 (611)
T 1nr0_A          332 SSAD--GKTLFSADAEGHINSWDISTGIS---NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV  406 (611)
T ss_dssp             ECTT--SSEEEEEETTSCEEEEETTTCCE---EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCC
T ss_pred             EeCC--CCEEEEEeCCCcEEEEECCCCce---eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcccccccee
Confidence            9998  77999999999999999754321   1111 24555555555554310000        0000           


Q ss_pred             -----------------------------------------cC----CCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762         180 -----------------------------------------KG----SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       180 -----------------------------------------~~----~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~  214 (318)
                                                               ..    -.+...+++||+|+.|++|+|||+.+++.....
T Consensus       407 ~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~  486 (611)
T 1nr0_A          407 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK  486 (611)
T ss_dssp             EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred             eeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeee
Confidence                                                     00    011223678999999999999999877544334


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE-EeeecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~-~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      . .+|...|++|+|+|+    +.+|++++.|++|++|++.+....... ....|...|++|+|+|||++||+++.|++|+
T Consensus       487 ~-~~h~~~v~~v~fspd----g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~  561 (611)
T 1nr0_A          487 T-IVHPAEITSVAFSNN----GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI  561 (611)
T ss_dssp             E-EECSSCEEEEEECTT----SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             c-cCCCCceEEEEECCC----CCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEE
Confidence            4 689999999999996    889999999999999998752211111 1234889999999999999999999999999


Q ss_pred             EEEECCCC
Q psy2762         294 LWKENTDG  301 (318)
Q Consensus       294 iW~~~~~~  301 (318)
                      ||+++.+.
T Consensus       562 lW~~~~~~  569 (611)
T 1nr0_A          562 VWNMNKPS  569 (611)
T ss_dssp             EEETTCTT
T ss_pred             EEECCCcc
Confidence            99987754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.6e-39  Score=288.69  Aligned_cols=266  Identities=20%  Similarity=0.311  Sum_probs=206.3

Q ss_pred             ecCCCcceeeeeee-----cC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc
Q psy2762           8 VDTGHEDMIHDAEM-----DY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT   81 (318)
Q Consensus         8 ~~~gH~~~v~~~~~-----~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~   81 (318)
                      .+.||.+.|++++|     ++ ++++|+|||.|++|+|||+....    .....+.....+.+|.+.|++++|++  ++.
T Consensus        16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~----~~~~~~~~~~~l~~h~~~V~~~~~~~--~~~   89 (343)
T 2xzm_R           16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEE----QNGYFGIPHKALTGHNHFVSDLALSQ--ENC   89 (343)
T ss_dssp             EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSC----CSSBSEEEEEEECCCSSCEEEEEECS--STT
T ss_pred             eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCC----cccccccccchhccCCCceEEEEECC--CCC
Confidence            56799999999999     76 99999999999999999986321    01113456788999999999999974  589


Q ss_pred             EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          82 LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      +|+||+.|++|++||+.+++.  ...+.+|...|.+++|+|+  +.++++++.|++|++||+.... .........|...
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~v~~sp~--~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~  164 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGTT--YKRFVGHQSEVYSVAFSPD--NRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDW  164 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSCE--EEEEECCCSCEEEEEECSS--TTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSC
T ss_pred             EEEEEcCCCcEEEEECCCCcE--EEEEcCCCCcEEEEEECCC--CCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCce
Confidence            999999999999999988764  3456789999999999998  6789999999999999974211 0011112368888


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      +.++.|+|+.....       .....+.+|++++.|++|++||... +  ....+.+|...|++++|+|+    +.+|++
T Consensus       165 v~~~~~~~~~~~~~-------~~~~~~~~l~s~~~d~~i~iwd~~~-~--~~~~~~~h~~~v~~~~~s~~----g~~l~s  230 (343)
T 2xzm_R          165 VSCVRYSPIMKSAN-------KVQPFAPYFASVGWDGRLKVWNTNF-Q--IRYTFKAHESNVNHLSISPN----GKYIAT  230 (343)
T ss_dssp             EEEEEECCCCCSCS-------CCCSSCCEEEEEETTSEEEEEETTT-E--EEEEEECCSSCEEEEEECTT----SSEEEE
T ss_pred             eeeeeecccccccc-------ccCCCCCEEEEEcCCCEEEEEcCCC-c--eeEEEcCccccceEEEECCC----CCEEEE
Confidence            99999999642111       0111135899999999999999543 2  34567899999999999996    889999


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ++.|++|+|||+.....  +.....+...|.+++|+|++++|++ +.|+.|+||++....
T Consensus       231 gs~dg~v~iwd~~~~~~--~~~~~~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~  287 (343)
T 2xzm_R          231 GGKDKKLLIWDILNLTY--PQREFDAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQS  287 (343)
T ss_dssp             EETTCEEEEEESSCCSS--CSEEEECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCC
T ss_pred             EcCCCeEEEEECCCCcc--cceeecCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCC
Confidence            99999999999854321  1122234567999999999998864 558899999986643

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1e-40  Score=300.72  Aligned_cols=255  Identities=17%  Similarity=0.184  Sum_probs=200.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeC------CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSS------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .+|+..|++++|+|||++|+|||.      |++|++|+.....       ..........+|.+.|++++|+++  + .+
T Consensus        39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~-------~~~~~~~~~~~~~~~V~~~~~s~d--~-~~  108 (357)
T 4g56_B           39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA-------PNESLCTAGVQTEAGVTDVAWVSE--K-GI  108 (357)
T ss_dssp             -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----------CGGGCSEEEECSSCEEEEEEETT--T-EE
T ss_pred             ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC-------cceeEecccCCCCCCEEEEEEcCC--C-CE
Confidence            469999999999999999999997      7789999875321       011223345579999999999743  4 56


Q ss_pred             EEEECCCeEEEEeCCCCcEEE--EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFK--YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      ++++.||+|+|||+.+++...  .....+|...|.+|+|+|+  +.+|++|+.|++|++||.....   ....+.+|...
T Consensus       109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~---~~~~~~~h~~~  183 (357)
T 4g56_B          109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKA---VLKSYNAHSSE  183 (357)
T ss_dssp             EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSC
T ss_pred             EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCCC
Confidence            678999999999998765332  2334579999999999998  7789999999999999974432   34556789999


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      +.+++|+|+.                ...|++++.|++|+|||+++++......+..|...|++|+|+|+   .+.+|++
T Consensus       184 v~~v~~s~~~----------------~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~---~~~~la~  244 (357)
T 4g56_B          184 VNCVAACPGK----------------DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE---KDDTFAC  244 (357)
T ss_dssp             EEEEEECTTC----------------SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT---STTEEEE
T ss_pred             EEEEEEccCC----------------CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc---ccceEEE
Confidence            9999999863                24689999999999999988765444455678888999999997   4678999


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ++.|+.|++||+.....  ...+..|...|.+++|+|++ ++||+++.|++|+|||++.+
T Consensus       245 g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~  302 (357)
T 4g56_B          245 GDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS  302 (357)
T ss_dssp             EESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred             eecccceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence            99999999999987542  34567788999999999997 67999999999999998765

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.3e-39  Score=313.52  Aligned_cols=252  Identities=19%  Similarity=0.289  Sum_probs=207.9

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ..+.||.+.|++++|+|+|++||||+.|++|+|||+...         ......++.+|.+.|++++|++  ++++|+++
T Consensus        53 ~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~---------~~~~~~~~~~~~~~v~~v~fs~--dg~~l~~~  121 (611)
T 1nr0_A           53 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT---------THILKTTIPVFSGPVKDISWDS--ESKRIAAV  121 (611)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST---------TCCEEEEEECSSSCEEEEEECT--TSCEEEEE
T ss_pred             eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCC---------cceeeEeecccCCceEEEEECC--CCCEEEEE
Confidence            456799999999999999999999999999999998522         2345668899999999999974  58999999


Q ss_pred             ECC----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          87 SYD----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        87 s~D----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      +.+    ++|++||...    ....+.+|...|++++|+|+. ..++++|+.|++|++|+....   .....+.+|...|
T Consensus       122 ~~~~~~~~~v~~wd~~~----~~~~l~gh~~~v~~v~f~p~~-~~~l~s~s~D~~v~lwd~~~~---~~~~~l~~H~~~V  193 (611)
T 1nr0_A          122 GEGRERFGHVFLFDTGT----SNGNLTGQARAMNSVDFKPSR-PFRIISGSDDNTVAIFEGPPF---KFKSTFGEHTKFV  193 (611)
T ss_dssp             ECCSSCSEEEEETTTCC----BCBCCCCCSSCEEEEEECSSS-SCEEEEEETTSCEEEEETTTB---EEEEEECCCSSCE
T ss_pred             ECCCCceeEEEEeeCCC----CcceecCCCCCceEEEECCCC-CeEEEEEeCCCeEEEEECCCC---eEeeeeccccCce
Confidence            876    4899998532    223567899999999999984 246999999999999985322   1234566899999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-------cCCCCeeEEEEccCCCCC
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-------NHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-------~h~~~V~~v~~sp~~~~~  235 (318)
                      .+++|+|+                 +.+||+|+.|++|+|||..+++..  ..+.       +|...|++++|+|+    
T Consensus       194 ~~v~fspd-----------------g~~las~s~D~~i~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~spd----  250 (611)
T 1nr0_A          194 HSVRYNPD-----------------GSLFASTGGDGTIVLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSPD----  250 (611)
T ss_dssp             EEEEECTT-----------------SSEEEEEETTSCEEEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECTT----
T ss_pred             EEEEECCC-----------------CCEEEEEECCCcEEEEECCCCcEe--eeeccccccccccCCCEEEEEECCC----
Confidence            99999997                 578999999999999998877643  3342       79999999999996    


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcce-----------------------------------------eeEEeeecCCcEEEE
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTW-----------------------------------------TPFIMNTFDDVVWNV  274 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~-----------------------------------------~~~~~~~~~~~v~~v  274 (318)
                      +.+|+|++.|++|+|||+.+....                                         ....+.+|...|.++
T Consensus       251 g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l  330 (611)
T 1nr0_A          251 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL  330 (611)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence            889999999999999998764211                                         012234688899999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         275 SWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       275 ~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|+|||++|++++.|++|++||+..+
T Consensus       331 ~~spdg~~l~s~s~D~~v~~Wd~~~~  356 (611)
T 1nr0_A          331 SSSADGKTLFSADAEGHINSWDISTG  356 (611)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTC
T ss_pred             EEeCCCCEEEEEeCCCcEEEEECCCC
Confidence            99999999999999999999997654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.1e-38  Score=278.28  Aligned_cols=252  Identities=21%  Similarity=0.383  Sum_probs=204.7

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      +.....||.+.|++++|+|+|++|++|+.|++|+||++.           .++....+.+|...|.+++|++  ++++|+
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~   81 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-----------DGKFEKTISGHKLGISDVAWSS--DSNLLV   81 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred             eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-----------CcccchhhccCCCceEEEEEcC--CCCEEE
Confidence            344567999999999999999999999999999999986           3456788999999999999974  589999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +++.|++|++||+.+++.  ...+.+|...|.+++|+|+  +.++++|+.|+.|++||+....   ....+..|..++..
T Consensus        82 s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~  154 (312)
T 4ery_A           82 SASDDKTLKIWDVSSGKC--LKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSA  154 (312)
T ss_dssp             EEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEE
T ss_pred             EECCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEE
Confidence            999999999999988764  3456789999999999998  6789999999999999985433   34556689999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +.|+|+                 +.+|++++.|+.|++||+.+++.... ....+...+..++|+|+    +.+|++++.
T Consensus       155 ~~~~~~-----------------~~~l~~~~~d~~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~l~~~~~  212 (312)
T 4ery_A          155 VHFNRD-----------------GSLIVSSSYDGLCRIWDTASGQCLKT-LIDDDNPPVSFVKFSPN----GKYILAATL  212 (312)
T ss_dssp             EEECTT-----------------SSEEEEEETTSCEEEEETTTCCEEEE-ECCSSCCCEEEEEECTT----SSEEEEEET
T ss_pred             EEEcCC-----------------CCEEEEEeCCCcEEEEECCCCceeeE-EeccCCCceEEEEECCC----CCEEEEEcC
Confidence            999996                 46899999999999999988764332 23567778999999996    667777777


Q ss_pred             CCeEEEEEcCCCcc-------------------------------------------eeeEEeeecCCcEEEEEEcCCCC
Q psy2762         245 DRKVIIWTSNDYVT-------------------------------------------WTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       245 D~~i~vw~~~~~~~-------------------------------------------~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      |+.|++||+.....                                           .....+.+|.+.|.+++|+|+++
T Consensus       213 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~  292 (312)
T 4ery_A          213 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN  292 (312)
T ss_dssp             TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred             CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence            77777777654210                                           01223445677888999999999


Q ss_pred             EEEEEe--CCCeEEEEEEC
Q psy2762         282 ILTVSC--GDNSVSLWKEN  298 (318)
Q Consensus       282 ~l~s~~--~D~~v~iW~~~  298 (318)
                      +|++++  .|++|++|+.+
T Consensus       293 ~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          293 IIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEEEEECTTTCCEEEEECC
T ss_pred             ceEEEEccCCccEEEecCC
Confidence            998887  58899999754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.1e-39  Score=289.12  Aligned_cols=251  Identities=20%  Similarity=0.301  Sum_probs=198.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||...|++++|+|++.+|+||+.|++|+|||+.           .++.+.++.+|.+.|++++|++  ++++|++++
T Consensus        71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~-----------~~~~~~~~~~h~~~v~~v~~sp--~~~~l~s~~  137 (343)
T 2xzm_R           71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR-----------TGTTYKRFVGHQSEVYSVAFSP--DNRQILSAG  137 (343)
T ss_dssp             EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT-----------SSCEEEEEECCCSCEEEEEECS--STTEEEEEE
T ss_pred             hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-----------CCcEEEEEcCCCCcEEEEEECC--CCCEEEEEc
Confidence            467999999999999999999999999999999996           3467888999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--------CcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--------GLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      .|++|++||+.............|...|.+++|+|+..        +.++++++.|+.|++||.  ..  .....+.+|.
T Consensus       138 ~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~--~~~~~~~~h~  213 (343)
T 2xzm_R          138 AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT--NF--QIRYTFKAHE  213 (343)
T ss_dssp             TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET--TT--EEEEEEECCS
T ss_pred             CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC--CC--ceeEEEcCcc
Confidence            99999999987542222112236888999999999742        158999999999999983  11  1234556899


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      .+|.+++|+|+                 +++||+|+.|++|+|||+..... ....+ .+...|++++|+|+    +.+|
T Consensus       214 ~~v~~~~~s~~-----------------g~~l~sgs~dg~v~iwd~~~~~~-~~~~~-~~~~~v~~v~~sp~----~~~l  270 (343)
T 2xzm_R          214 SNVNHLSISPN-----------------GKYIATGGKDKKLLIWDILNLTY-PQREF-DAGSTINQIAFNPK----LQWV  270 (343)
T ss_dssp             SCEEEEEECTT-----------------SSEEEEEETTCEEEEEESSCCSS-CSEEE-ECSSCEEEEEECSS----SCEE
T ss_pred             ccceEEEECCC-----------------CCEEEEEcCCCeEEEEECCCCcc-cceee-cCCCcEEEEEECCC----CCEE
Confidence            99999999997                 57899999999999999843321 11222 24556999999996    5555


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      + ++.|+.|++|++..........+.           +|...|.+++|+|+|++|++|+.||+|++|+.++
T Consensus       271 a-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~  340 (343)
T 2xzm_R          271 A-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET  340 (343)
T ss_dssp             E-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred             E-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence            5 567888999998764321111221           5667899999999999999999999999999754

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.7e-38  Score=288.35  Aligned_cols=244  Identities=22%  Similarity=0.369  Sum_probs=202.3

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...|++++|+|+|++|++|+.|++|+|||+.           .++.+..+.+|.+.|++++|++  ++.+|++++.|++|
T Consensus       123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~-----------~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~v  189 (393)
T 1erj_A          123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIE-----------NRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSGDRTV  189 (393)
T ss_dssp             CCBEEEEEECTTSSEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred             ceeEEEEEECCCCCEEEEEcCCCeEEEEECC-----------CCcEEEEEccCCCCEEEEEEcC--CCCEEEEecCCCcE
Confidence            3459999999999999999999999999996           3567888999999999999974  58999999999999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-------ccccccccee
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-------AAHTIGCNAV  165 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-------~~h~~~v~~~  165 (318)
                      ++||+.+++....  +. +...+.+++|+|.+ +.++++|+.|+.|++||...+.   ....+       .+|...|.++
T Consensus       190 ~iwd~~~~~~~~~--~~-~~~~v~~~~~~~~~-~~~l~~~s~d~~v~iwd~~~~~---~~~~~~~~~~~~~~h~~~v~~v  262 (393)
T 1erj_A          190 RIWDLRTGQCSLT--LS-IEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGF---LVERLDSENESGTGHKDSVYSV  262 (393)
T ss_dssp             EEEETTTTEEEEE--EE-CSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCC---EEEEEC------CCCSSCEEEE
T ss_pred             EEEECCCCeeEEE--EE-cCCCcEEEEEECCC-CCEEEEEcCCCcEEEEECCCCc---EEEeecccccCCCCCCCCEEEE
Confidence            9999998764433  32 56789999999942 6799999999999999975432   11222       4688899999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE----------EEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW----------IEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~----------~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      +|+|+                 +.+|++|+.|++|+|||+.....          .....+.+|...|.+++|+|+    
T Consensus       263 ~~~~~-----------------g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----  321 (393)
T 1erj_A          263 VFTRD-----------------GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN----  321 (393)
T ss_dssp             EECTT-----------------SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG----
T ss_pred             EECCC-----------------CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC----
Confidence            99997                 47899999999999999865321          123456799999999999996    


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC------CCCEEEEEeCCCeEEEEEECC
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL------TGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp------dg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +.+|++++.|++|++||.....  ....+.+|...|.+++|+|      ++++|+|++.|++|+||+...
T Consensus       322 ~~~l~sgs~D~~v~iwd~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          322 DEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             GCEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCe--EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence            8899999999999999988754  2455678999999999986      689999999999999999653

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.8e-38  Score=279.59  Aligned_cols=251  Identities=20%  Similarity=0.270  Sum_probs=205.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|.+++|+|++++|++|+.|++|+|||+.           +++.+..+++|.+.|++++|++  ++.+|+||+
T Consensus        50 ~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~sgs  116 (304)
T 2ynn_A           50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-----------TGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGS  116 (304)
T ss_dssp             EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECS--SSSEEEEEE
T ss_pred             EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-----------CCcEEEEEeCCCCcEEEEEEcC--CCCEEEEEC
Confidence            345799999999999999999999999999999986           3567889999999999999964  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++||+.++.. ....+.+|...|.+++|+|.+ +.++++|+.|++|++||+.....  ......+|..++..+.|
T Consensus       117 ~D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~~~  192 (304)
T 2ynn_A          117 DDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDY  192 (304)
T ss_dssp             TTSCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTC-TTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEEEE
T ss_pred             CCCeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCC-CCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEEEE
Confidence            999999999987642 334577899999999999953 56899999999999999754332  12222356677888888


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|..               .+.+|++|+.|++|+|||++++++  ..++.+|...|.+++|+|+    +.+|+|++.|++
T Consensus       193 ~~~~---------------~~~~l~s~s~D~~i~iWd~~~~~~--~~~~~~h~~~v~~~~~~p~----~~~l~s~s~Dg~  251 (304)
T 2ynn_A          193 YPLP---------------DKPYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPT----LPIIISGSEDGT  251 (304)
T ss_dssp             CCST---------------TCCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSEEEEEETTSC
T ss_pred             EEcC---------------CCCEEEEEcCCCeEEEEeCCCCcc--ceeeCCCCCCEEEEEECCC----CCEEEEEcCCCe
Confidence            8741               146899999999999999988764  4667899999999999996    779999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC--EEEEEeCCCeEEEEEECC
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD--ILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~--~l~s~~~D~~v~iW~~~~  299 (318)
                      |+|||..+..  ....+..+...+++++|+|+|.  +||+++.| .+.+|++..
T Consensus       252 i~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~  302 (304)
T 2ynn_A          252 LKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN  302 (304)
T ss_dssp             EEEEETTTCC--EEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred             EEEEECCCCc--eeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence            9999998754  2345567778999999999885  57777655 567887554

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=5.7e-38  Score=286.19  Aligned_cols=252  Identities=23%  Similarity=0.356  Sum_probs=200.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------------cCeEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------------GPVWQV   72 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------------~~V~~v   72 (318)
                      +|...|.+++|+|+|++|++|+ |++++||++..           +..+..+..|.                  ..|.++
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~-----------g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v  129 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSD-----------GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV  129 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTT-----------CCEEEEECC-----------------CCCCBEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecC-----------CCEEEEecCccccccccccccccccCCCceeEEEE
Confidence            6999999999999999999976 78999999863           34455555443                  349999


Q ss_pred             EecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce
Q psy2762          73 AWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES  152 (318)
Q Consensus        73 ~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~  152 (318)
                      +|++  ++++||+|+.|++|+|||+.+++.  ...+.+|...|.+++|+|+  +.++++++.|++|++||+....    .
T Consensus       130 ~~s~--dg~~l~s~~~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~----~  199 (393)
T 1erj_A          130 CFSP--DGKFLATGAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQ----C  199 (393)
T ss_dssp             EECT--TSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----E
T ss_pred             EECC--CCCEEEEEcCCCeEEEEECCCCcE--EEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCe----e
Confidence            9974  589999999999999999988753  4457789999999999998  6789999999999999974432    2


Q ss_pred             eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE-----EcccCCCCeeEEE
Q psy2762         153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET-----KLENHSDWVRDVA  227 (318)
Q Consensus       153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~-----~~~~h~~~V~~v~  227 (318)
                      .....+...+..++|+|..                +.+|++|+.|++|+|||..++......     ...+|...|++++
T Consensus       200 ~~~~~~~~~v~~~~~~~~~----------------~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~  263 (393)
T 1erj_A          200 SLTLSIEDGVTTVAVSPGD----------------GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV  263 (393)
T ss_dssp             EEEEECSSCEEEEEECSTT----------------CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred             EEEEEcCCCcEEEEEECCC----------------CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence            2223456678899999842                478999999999999999877543322     1268999999999


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcc----------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVT----------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~----------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |+|+    +.+|++++.|++|++||+.....          .....+.+|...|.+++|+|++++|++++.|++|++||.
T Consensus       264 ~~~~----g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~  339 (393)
T 1erj_A          264 FTRD----GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK  339 (393)
T ss_dssp             ECTT----SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             ECCC----CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            9996    88999999999999999875321          012245578899999999999999999999999999998


Q ss_pred             CCCCceE
Q psy2762         298 NTDGAWQ  304 (318)
Q Consensus       298 ~~~~~~~  304 (318)
                      ..+....
T Consensus       340 ~~~~~~~  346 (393)
T 1erj_A          340 KSGNPLL  346 (393)
T ss_dssp             TTCCEEE
T ss_pred             CCCeEEE
Confidence            7765443

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.9e-38  Score=299.75  Aligned_cols=239  Identities=29%  Similarity=0.500  Sum_probs=207.3

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|.+++|+|+|++|++++.|++|++||..            +..+.++.+|...|.+++|++  ++++|++++
T Consensus       339 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~------------~~~~~~~~~~~~~v~~~~~s~--dg~~l~~~~  404 (577)
T 2ymu_A          339 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN------------GQLLQTLTGHSSSVRGVAFSP--DGQTIASAS  404 (577)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT------------CCEEEEEECCSSCEEEEEECT--TSSCEEEEE
T ss_pred             EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC------------CCEEEEecCCCCCeEEEEECC--CCCEEEEEe
Confidence            346899999999999999999999999999999964            356788999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++||... +  ....+.+|...|.+++|+|+  +.++++++.|++|++|+.. .   .....+.+|..++.+++|
T Consensus       405 ~d~~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~-~---~~~~~~~~~~~~v~~~~~  475 (577)
T 2ymu_A          405 DDKTVKLWNRNG-Q--LLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRN-G---QLLQTLTGHSSSVRGVAF  475 (577)
T ss_dssp             TTSEEEEECTTC-C--EEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETT-S---CEEEEEECCSSCEEEEEE
T ss_pred             CCCEEEEEeCCC-C--EEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECC-C---CEEEEEcCCCCCEEEEEE
Confidence            999999999653 3  33456789999999999998  6789999999999999852 1   134566789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+                 +++||+++.|++|+|||... +  ....+.+|...|++|+|+|+    +.+|++++.|+.
T Consensus       476 spd-----------------~~~las~~~d~~i~iw~~~~-~--~~~~~~~h~~~v~~l~~s~d----g~~l~s~~~dg~  531 (577)
T 2ymu_A          476 SPD-----------------GQTIASASDDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPD----GQTIASASDDKT  531 (577)
T ss_dssp             CTT-----------------SCEEEEEETTSEEEEEETTS-C--EEEEEECCSSCEEEEEECTT----SSCEEEEETTSE
T ss_pred             cCC-----------------CCEEEEEeCCCEEEEEcCCC-C--EEEEEeCCCCCEEEEEEcCC----CCEEEEEECcCE
Confidence            997                 57899999999999999754 3  24567899999999999996    889999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      |+|||....   ....+.+|.+.|++++|+|||++|+|++.|++|++||
T Consensus       532 v~lwd~~~~---~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          532 VKLWNRNGQ---LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEECTTSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEeCCCC---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            999997542   3456778999999999999999999999999999996

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-38  Score=313.71  Aligned_cols=288  Identities=46%  Similarity=0.871  Sum_probs=226.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..||.+.|++++|+|+|++|++|+.||+|+|||+...         .+..+.++.+|.+.|++++|+++.++++|++|+
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~---------~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s   74 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE---------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCS   74 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT---------EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC---------CCccceeccCCcCceEEEEecCCCCCCEEEEEe
Confidence            45799999999999999999999999999999998632         456788999999999999998655589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .||+|++||+.++.......+.+|...|.+++|+|+..+.++++|+.|+.|++||+..... .....+.+|..++.++.|
T Consensus        75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-~~~~~~~~~~~~v~~l~~  153 (753)
T 3jro_A           75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASW  153 (753)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-CCCEEEECCSSCEEEEEE
T ss_pred             CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-cceeEeecCCCceEEEEe
Confidence            9999999999988655666778899999999999974356899999999999999865532 123345689999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe--EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK--WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~--~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|........    ......+.+|++|+.||+|++||+..+.  ......+.+|...|++++|+|+.. .+.+|++++.|
T Consensus       154 ~p~~~~~~~~----~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~-~~~~l~s~s~D  228 (753)
T 3jro_A          154 APATIEEDGE----HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL-LRSYLASVSQD  228 (753)
T ss_dssp             CCCC-------------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS-SSEEEEEEESS
T ss_pred             cCcccccccc----cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC-CCCEEEEEecC
Confidence            9941000000    0000114689999999999999987652  234566789999999999999510 17899999999


Q ss_pred             CeEEEEEcCCCcce---eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762         246 RKVIIWTSNDYVTW---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       246 ~~i~vw~~~~~~~~---~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      ++|++|++......   .......|...|++++|+|+|++|++++.||.|++|+.+.++.|.+...+.
T Consensus       229 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~  296 (753)
T 3jro_A          229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVH  296 (753)
T ss_dssp             SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBCCCCBC
T ss_pred             CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcccccccc
Confidence            99999998874311   111223477889999999999999999999999999999888887665543

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=3.2e-37  Score=277.00  Aligned_cols=262  Identities=19%  Similarity=0.315  Sum_probs=219.2

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..|++.|++++|+|++++|++|+.|++|+|||+...         ....+..+.+|.+.|.+++|++  ++++|++++.|
T Consensus         5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~---------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d   73 (372)
T 1k8k_C            5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---------KWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGTD   73 (372)
T ss_dssp             ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT---------EEEEEEEEECCSSCEEEEEEET--TTTEEEEEETT
T ss_pred             cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC---------cEEeeeeecCCCCcccEEEEeC--CCCEEEEEcCC
Confidence            469999999999999999999999999999998632         1227888999999999999974  58999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeeeC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWG  168 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~  168 (318)
                      ++|++||+.+++......+..|...|.+++|+|+  +.++++++.|+.|++|++...........+ ..|...+.+++|+
T Consensus        74 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~  151 (372)
T 1k8k_C           74 RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH  151 (372)
T ss_dssp             SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred             CeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence            9999999988776666666789999999999998  678999999999999999765432222233 4788899999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc------------------CCeEEEEEEcccCCCCeeEEEEcc
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE------------------GDKWIEETKLENHSDWVRDVAWAP  230 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~------------------~~~~~~~~~~~~h~~~V~~v~~sp  230 (318)
                      |+                 +.+|++++.|+.|++||+.                  .++  ....+.+|...|.+++|+|
T Consensus       152 ~~-----------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~  212 (372)
T 1k8k_C          152 PN-----------------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE--LMFESSSSCGWVHGVCFSA  212 (372)
T ss_dssp             TT-----------------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC--EEEECCCCSSCEEEEEECS
T ss_pred             CC-----------------CCEEEEEcCCCCEEEEEcccccccccccccccccccchhh--heEecCCCCCeEEEEEECC
Confidence            96                 4689999999999999953                  333  3456779999999999999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC-CCceEEEeee
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT-DGAWQCITEM  309 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~-~~~~~~~~~~  309 (318)
                      +    +.+|++++.|+.|++||+....  ....+..|...|.+++|+|+|++|+++ .|+.+++|+... .+.|.++..+
T Consensus       213 ~----~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~  285 (372)
T 1k8k_C          213 N----GSRVAWVSHDSTVCLADADKKM--AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRL  285 (372)
T ss_dssp             S----SSEEEEEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCC
T ss_pred             C----CCEEEEEeCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeecc
Confidence            6    7899999999999999997654  234556788899999999999988877 899999999876 3577776554


Q ss_pred             c
Q psy2762         310 G  310 (318)
Q Consensus       310 ~  310 (318)
                      .
T Consensus       286 ~  286 (372)
T 1k8k_C          286 D  286 (372)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.5e-39  Score=289.43  Aligned_cols=263  Identities=16%  Similarity=0.253  Sum_probs=201.6

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..|.+.|++++|+|+|++|++|+.|++|+|||+...         ....+..+.+|.+.|++++|++  ++++|++++.|
T Consensus         8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s~d   76 (377)
T 3dwl_C            8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN---------GWKHARTFSDHDKIVTCVDWAP--KSNRIVTCSQD   76 (377)
T ss_dssp             EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT---------EEEECCCBCCCSSCEEEEEECT--TTCCEEEEETT
T ss_pred             ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC---------ceEEEEEEecCCceEEEEEEeC--CCCEEEEEeCC
Confidence            346789999999999999999999999999999621         1156778899999999999974  48999999999


Q ss_pred             CeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceeee
Q psy2762          90 RKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSW  167 (318)
Q Consensus        90 g~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~  167 (318)
                      ++|++||+.++. ......+.+|...|.+++|+|+  +.++++++.|+.|++|++...........+.. |...+.+++|
T Consensus        77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~  154 (377)
T 3dwl_C           77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW  154 (377)
T ss_dssp             SSEEEC------CCCCEEECCCCSSCEEEEECCTT--SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred             CeEEEEEcCCCCceeeeeEecccCCceEEEEECCC--CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence            999999998765 3345567789999999999998  67899999999999999865432112345555 9999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe----------------EEEEEEcccCCCCeeEEEEccC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK----------------WIEETKLENHSDWVRDVAWAPS  231 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~----------------~~~~~~~~~h~~~V~~v~~sp~  231 (318)
                      +|+                 +.+|++++.|++|++||+..++                ......+ +|...|++++|+|+
T Consensus       155 ~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~  216 (377)
T 3dwl_C          155 HPN-----------------NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS  216 (377)
T ss_dssp             CTT-----------------SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT
T ss_pred             cCC-----------------CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC
Confidence            997                 4689999999999999985211                1234445 89999999999996


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCccee--eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEeee
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYVTWT--PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~~  309 (318)
                          +.+|++++.|++|++||+.......  ...+..|...|.+++|+|+|++|++++.|+.+ +|+...+ .|.....+
T Consensus       217 ----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~  290 (377)
T 3dwl_C          217 ----GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNES-GWAHTRDL  290 (377)
T ss_dssp             ----SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC----CCSBCC
T ss_pred             ----CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCC-ceEEEeee
Confidence                7899999999999999998764310  23456788899999999999999988877666 7765543 34443333

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.3e-38  Score=294.21  Aligned_cols=256  Identities=11%  Similarity=0.131  Sum_probs=197.7

Q ss_pred             cCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           9 DTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ..+|...|++++|+| ++++||+|+.||+|+|||+...         ....+..+.+|.+.|++++|+ |.++.+|+|||
T Consensus       115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~---------~~~~~~~~~gH~~~V~~l~f~-p~~~~~l~s~s  184 (435)
T 4e54_B          115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK---------DKPTFIKGIGAGGSITGLKFN-PLNTNQFYASS  184 (435)
T ss_dssp             EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC---------SCCEEECCCSSSCCCCEEEEC-SSCTTEEEEEC
T ss_pred             CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC---------CceeEEEccCCCCCEEEEEEe-CCCCCEEEEEe
Confidence            357889999999999 5789999999999999998632         234456678999999999996 45689999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .||+|+|||+.+...........+...+.+++|+|+  +.++++|+.|+.|++||....    .+..+.+|...|.+++|
T Consensus       185 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~~v~~v~~  258 (435)
T 4e54_B          185 MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS--SRMVVTGDNVGNVILLNMDGK----ELWNLRMHKKKVTHVAL  258 (435)
T ss_dssp             SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT--TTEEEEECSSSBEEEEESSSC----BCCCSBCCSSCEEEEEE
T ss_pred             CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCC--CCEEEEEeCCCcEeeeccCcc----eeEEEecccceEEeeee
Confidence            999999999987643333333334556889999998  779999999999999997421    34556789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      +|+.                ..+|++|+.|++|+|||+...+.. ......+|...|++|+|+|+    +.+|++++.|+
T Consensus       259 ~p~~----------------~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd----g~~l~s~~~D~  318 (435)
T 4e54_B          259 NPCC----------------DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD----GARLLTTDQKS  318 (435)
T ss_dssp             CTTC----------------SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT----SSEEEEEESSS
T ss_pred             cCCC----------------ceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCC----CCeeEEEcCCC
Confidence            9963                247899999999999998765321 12234689999999999996    88999999999


Q ss_pred             eEEEEEcCCCcce-----------------------------------------------eeE-----------E-eeec
Q psy2762         247 KVIIWTSNDYVTW-----------------------------------------------TPF-----------I-MNTF  267 (318)
Q Consensus       247 ~i~vw~~~~~~~~-----------------------------------------------~~~-----------~-~~~~  267 (318)
                      +|+||++......                                               ...           . ...|
T Consensus       319 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~  398 (435)
T 4e54_B          319 EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE  398 (435)
T ss_dssp             CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS
T ss_pred             EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC
Confidence            9999997652100                                               000           0 1123


Q ss_pred             CCcEEEE-EEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         268 DDVVWNV-SWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       268 ~~~v~~v-~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ...|.++ +|+|||++||+|+ |++|+||+.+.+.
T Consensus       399 ~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk  432 (435)
T 4e54_B          399 SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR  432 (435)
T ss_dssp             CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred             CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence            4556666 6999999999876 7899999987653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=6.9e-37  Score=298.44  Aligned_cols=257  Identities=20%  Similarity=0.316  Sum_probs=207.5

Q ss_pred             ecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .+.||.+.|++++|+|++ .+|+|||.|++|+|||+....      ...+.....+.+|.+.|.+++|++  ++++|+||
T Consensus       377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~------~~~~~~~~~~~~h~~~v~~v~~s~--~g~~l~sg  448 (694)
T 3dm0_A          377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDD------KAYGVAQRRLTGHSHFVEDVVLSS--DGQFALSG  448 (694)
T ss_dssp             EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCST------TCSCEEEEEEECCSSCEEEEEECT--TSSEEEEE
T ss_pred             hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCC------cccccccceecCCCCcEEEEEECC--CCCEEEEE
Confidence            467999999999999874 799999999999999986321      112455678999999999999974  58999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-eeeccccccccee
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTIGCNAV  165 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~~~~h~~~v~~~  165 (318)
                      +.|++|+|||+.++..  ...+.+|...|.+++|+|+  +.++++++.|++|++|+...... ... ....+|...|.++
T Consensus       449 s~Dg~v~vwd~~~~~~--~~~~~~h~~~v~~~~~s~~--~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~  523 (694)
T 3dm0_A          449 SWDGELRLWDLAAGVS--TRRFVGHTKDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCV  523 (694)
T ss_dssp             ETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECTT--SSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEE
T ss_pred             eCCCcEEEEECCCCcc--eeEEeCCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEE
Confidence            9999999999988753  4456789999999999998  67899999999999998632210 011 1123688889999


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|+|+..               ...|++|+.|++|+|||+.++++  ...+.+|...|++|+|+|+    +.+|++++.|
T Consensus       524 ~~~~~~~---------------~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~~v~~spd----g~~l~sg~~D  582 (694)
T 3dm0_A          524 RFSPNTL---------------QPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVSTVAVSPD----GSLCASGGKD  582 (694)
T ss_dssp             EECSCSS---------------SCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT----SSEEEEEETT
T ss_pred             EEeCCCC---------------cceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEeCC----CCEEEEEeCC
Confidence            9999631               24799999999999999988754  4567899999999999996    8899999999


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ++|+|||+.....  .. ...+...|.+++|+|++.+|++++ |+.|+|||++.+..
T Consensus       583 g~i~iwd~~~~~~--~~-~~~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~  635 (694)
T 3dm0_A          583 GVVLLWDLAEGKK--LY-SLEANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSI  635 (694)
T ss_dssp             SBCEEEETTTTEE--EE-CCBCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEE
T ss_pred             CeEEEEECCCCce--EE-EecCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCC
Confidence            9999999987532  11 223456899999999999887665 66799999877543

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=6.2e-36  Score=284.55  Aligned_cols=240  Identities=29%  Similarity=0.501  Sum_probs=207.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|.+++|+|++++|++++.|++|++||+.            +..+..+.+|...|++++|++  ++++|++++
T Consensus       298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~------------~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~  363 (577)
T 2ymu_A          298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN------------GQHLQTLTGHSSSVWGVAFSP--DGQTIASAS  363 (577)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT------------SCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC------------CCeeEEEeCCCCCEEEEEECC--CCCEEEEEe
Confidence            457899999999999999999999999999999985            235678899999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++||... +  ....+.+|...|.+++|+|+  +.++++++.|+.|++|+. ..   .....+.+|..++..++|
T Consensus       364 ~dg~v~~~~~~~-~--~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~~-~~---~~~~~~~~~~~~v~~~~~  434 (577)
T 2ymu_A          364 DDKTVKLWNRNG-Q--LLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNR-NG---QLLQTLTGHSSSVWGVAF  434 (577)
T ss_dssp             TTSEEEEEETTC-C--EEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEECT-TC---CEEEEEECCSSCEEEEEE
T ss_pred             CCCEEEEEcCCC-C--EEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEeC-CC---CEEEEecCCCCCeEEEEE
Confidence            999999999653 3  33456789999999999998  678999999999999984 11   134556789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+                 +.+|++++.|++|++||....   ....+.+|...|++++|+|+    +.+|++++.|++
T Consensus       435 s~d-----------------~~~l~~~~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~spd----~~~las~~~d~~  490 (577)
T 2ymu_A          435 SPD-----------------DQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFSPD----GQTIASASDDKT  490 (577)
T ss_dssp             CTT-----------------SSEEEEEETTSEEEEEETTSC---EEEEEECCSSCEEEEEECTT----SCEEEEEETTSE
T ss_pred             CCC-----------------CCEEEEEcCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEcCC----CCEEEEEeCCCE
Confidence            997                 468999999999999997653   24567799999999999996    889999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |+||+....   ....+.+|...|.+++|+|||++||+++.|++|+|||.
T Consensus       491 i~iw~~~~~---~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          491 VKLWNRNGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  537 (577)
T ss_dssp             EEEEETTSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred             EEEEcCCCC---EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence            999997542   34566789999999999999999999999999999984

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-35  Score=264.51  Aligned_cols=252  Identities=18%  Similarity=0.292  Sum_probs=208.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.||++.|++++|+|+|++|++|+.|+.|+|||+.           .++.+..+.+|.+.|++++|++  ++++|++++
T Consensus        27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~   93 (369)
T 3zwl_B           27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSL-----------NGERLGTLDGHTGTIWSIDVDC--FTKYCVTGS   93 (369)
T ss_dssp             EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----------CchhhhhhhhcCCcEEEEEEcC--CCCEEEEEe
Confidence            457999999999999999999999999999999986           3467889999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-----CeEEEEEeecCCCCc--------ceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-----GTISFLTYMSDTNSW--------ESRK  154 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-----~~i~i~~~~~~~~~~--------~~~~  154 (318)
                      .|++|++||+.+++.....  . +...|.+++|+|+  +.++++++.+     +.|.+|++.......        ....
T Consensus        94 ~dg~i~iwd~~~~~~~~~~--~-~~~~v~~~~~~~~--~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~  168 (369)
T 3zwl_B           94 ADYSIKLWDVSNGQCVATW--K-SPVPVKRVEFSPC--GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK  168 (369)
T ss_dssp             TTTEEEEEETTTCCEEEEE--E-CSSCEEEEEECTT--SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred             CCCeEEEEECCCCcEEEEe--e-cCCCeEEEEEccC--CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence            9999999999988754443  3 7889999999998  6789999988     999999987654211        1122


Q ss_pred             eccccc--ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEccC
Q psy2762         155 IAAHTI--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPS  231 (318)
Q Consensus       155 ~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~  231 (318)
                      +..|..  .+..++|+|+                 +.+|++++.|+.|++||+.+ .+  ....+..|...|.+++|+|+
T Consensus       169 ~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~  229 (369)
T 3zwl_B          169 IITHEGLDAATVAGWSTK-----------------GKYIIAGHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPD  229 (369)
T ss_dssp             EECCTTCCCEEEEEECGG-----------------GCEEEEEETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTT
T ss_pred             ccCCcCccceeEEEEcCC-----------------CCEEEEEcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCC
Confidence            334554  7888999986                 57899999999999999987 44  34567789999999999996


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCccee---------------------------------------------------
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYVTWT---------------------------------------------------  260 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~---------------------------------------------------  260 (318)
                          +.+|++++.|+.|++||+.......                                                   
T Consensus       230 ----~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~  305 (369)
T 3zwl_B          230 ----LTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE  305 (369)
T ss_dssp             ----SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred             ----CCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence                8899999999999999987642100                                                   


Q ss_pred             --eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         261 --PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       261 --~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                        ...+..|...|.+++|+|+|++|++++.||+|+||+++.+
T Consensus       306 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~  347 (369)
T 3zwl_B          306 EEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS  347 (369)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred             cchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence              1122346788999999999999999999999999998763

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.2e-35  Score=273.03  Aligned_cols=249  Identities=20%  Similarity=0.357  Sum_probs=205.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|.+.|++++|+|+|++|++|+.||+|+|||+.           .++.+.++.+|...|.+++|+    +.+|++|+.
T Consensus       143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-----------~~~~~~~~~~h~~~v~~~s~~----~~~l~sgs~  207 (420)
T 4gga_A          143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----------QQKRLRNMTSHSARVGSLSWN----SYILSSGSR  207 (420)
T ss_dssp             CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEE----TTEEEEEET
T ss_pred             ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-----------CCcEEEEEeCCCCceEEEeeC----CCEEEEEeC
Confidence            35788999999999999999999999999999996           457889999999999999984    689999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccccccceeee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~~~v~~~~~  167 (318)
                      |+++++||...... ....+.+|...+..+.++|+  +.++++++.|+.|++|+........ .......|...|..++|
T Consensus       208 d~~i~~~d~~~~~~-~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~  284 (420)
T 4gga_A          208 SGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW  284 (420)
T ss_dssp             TSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred             CCceeEeeecccce-eeEEecccccceeeeeecCC--CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee
Confidence            99999999876442 34457789999999999998  7799999999999999986554221 23344578889999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEE--EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe--
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLV--SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--  243 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~la--sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--  243 (318)
                      +|..                ...++  +|+.|++|+|||+.++++..  .+..| ..|.++.|+|+    +..|++++  
T Consensus       285 ~p~~----------------~~~la~~~gs~D~~I~iwd~~t~~~~~--~~~~~-~~v~~~~~~~~----~~~lv~~sg~  341 (420)
T 4gga_A          285 CPWQ----------------SNVLATGGGTSDRHIRIWNVCSGACLS--AVDAH-SQVCSILWSPH----YKELISGHGF  341 (420)
T ss_dssp             CTTC----------------TTEEEEEECTTTCEEEEEETTTTEEEE--EEECS-SCEEEEEEETT----TTEEEEEECT
T ss_pred             CCCc----------------ccEEEEEeecCCCEEEEEeCCccccce--eeccc-cceeeeeecCC----CCeEEEEEec
Confidence            9964                23444  56789999999999886543  33334 56899999996    55666554  


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .|++|+|||..+..  ....+.+|.+.|++++|+|||++|+|++.|++|||||+...
T Consensus       342 ~d~~I~iwd~~~~~--~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~  396 (420)
T 4gga_A          342 AQNQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  396 (420)
T ss_dssp             TTCCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred             CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            79999999998754  34567789999999999999999999999999999998654

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5e-36  Score=292.37  Aligned_cols=248  Identities=19%  Similarity=0.312  Sum_probs=199.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||...|++++|+|+|++|+||+.|++|+|||+.           .+..+..+.+|.+.|.+++|++  ++.+|+||+
T Consensus       425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~-----------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~s  491 (694)
T 3dm0_A          425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA-----------AGVSTRRFVGHTKDVLSVAFSL--DNRQIVSAS  491 (694)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEECT--TSSCEEEEE
T ss_pred             eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC-----------CCcceeEEeCCCCCEEEEEEeC--CCCEEEEEe
Confidence            457999999999999999999999999999999996           3567888999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEE-EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYY-EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      .|++|+|||.......... ...+|...|.+++|+|+....++++++.|++|++||+....   ....+.+|...|.+++
T Consensus       492 ~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---~~~~~~~h~~~v~~v~  568 (694)
T 3dm0_A          492 RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---LRSTLAGHTGYVSTVA  568 (694)
T ss_dssp             TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEE
T ss_pred             CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEE
Confidence            9999999998654321111 12468889999999998545689999999999999975432   3445678999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|+                 +.+|++|+.|++|+|||+.+++..  ..+. +...|.+++|+|+    +.+|+++ .|+
T Consensus       569 ~spd-----------------g~~l~sg~~Dg~i~iwd~~~~~~~--~~~~-~~~~v~~~~~sp~----~~~l~~~-~~~  623 (694)
T 3dm0_A          569 VSPD-----------------GSLCASGGKDGVVLLWDLAEGKKL--YSLE-ANSVIHALCFSPN----RYWLCAA-TEH  623 (694)
T ss_dssp             ECTT-----------------SSEEEEEETTSBCEEEETTTTEEE--ECCB-CSSCEEEEEECSS----SSEEEEE-ETT
T ss_pred             EeCC-----------------CCEEEEEeCCCeEEEEECCCCceE--EEec-CCCcEEEEEEcCC----CcEEEEE-cCC
Confidence            9997                 478999999999999999887643  3443 4567999999996    6666655 567


Q ss_pred             eEEEEEcCCCcceeeEEee-------------------ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         247 KVIIWTSNDYVTWTPFIMN-------------------TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~-------------------~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      .|+|||+......  ..+.                   .+.-.+.+++|+|||++|+|++.||+|+||++.
T Consensus       624 ~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          624 GIKIWDLESKSIV--EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             EEEEEETTTTEEE--EEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CEEEEECCCCCCh--hhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            7999999875311  1111                   011247899999999999999999999999965

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.7e-36  Score=271.21  Aligned_cols=253  Identities=17%  Similarity=0.207  Sum_probs=203.0

Q ss_pred             CCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762          11 GHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        11 gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .|...|++++|+|+    |++|++|+.||+|+|||+.           .++.+..+.+|.+.|.+++|++ .++.+|+++
T Consensus        67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-----------~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~s~  134 (366)
T 3k26_A           67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-----------TMQCIKHYVGHGNAINELKFHP-RDPNLLLSV  134 (366)
T ss_dssp             CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT-----------TCCEEEEEESCCSCEEEEEECS-SCTTEEEEE
T ss_pred             CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch-----------hceEeeeecCCCCcEEEEEECC-CCCCEEEEE
Confidence            47789999999999    6799999999999999986           3467888999999999999974 358999999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc---------------
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW---------------  150 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~---------------  150 (318)
                      +.|++|++||+.+++...... +..|...|.+++|+|+  +.++++++.|+.|++||+.......               
T Consensus       135 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~  212 (366)
T 3k26_A          135 SKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL--GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNR  212 (366)
T ss_dssp             ETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT--SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSS
T ss_pred             eCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC--CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcc
Confidence            999999999998876433221 1579999999999998  6789999999999999975332100               


Q ss_pred             ----------ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE----------
Q psy2762         151 ----------ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW----------  210 (318)
Q Consensus       151 ----------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~----------  210 (318)
                                .......|...+.+++|++                   .+|++++.|+.|++||+.+...          
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  273 (366)
T 3k26_A          213 PFISQKIHFPDFSTRDIHRNYVDCVRWLG-------------------DLILSKSCENAIVCWKPGKMEDDIDKIKPSES  273 (366)
T ss_dssp             CCCCEEECCCSEEECSSCSSCCCEEEEET-------------------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCC
T ss_pred             cccceeeccCccccccCCcceEEEEEEcC-------------------CEEEEEecCCEEEEEeCCCccccccccccCCc
Confidence                      0001113777788888763                   4799999999999999876432          


Q ss_pred             --EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeec--CCcEEEEEEcCCCCEEE
Q psy2762         211 --IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTF--DDVVWNVSWSLTGDILT  284 (318)
Q Consensus       211 --~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~--~~~v~~v~~spdg~~l~  284 (318)
                        .....+.+|...|++++|+|+.  ++.+|++++.|+.|++|++......  ....+..|  ...|.+++|+|+|++|+
T Consensus       274 ~~~~~~~~~~~~~~v~~~~~s~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  351 (366)
T 3k26_A          274 NVTILGRFDYSQCDIWYMRFSMDF--WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI  351 (366)
T ss_dssp             CEEEEEEEECSSCCSSCCCCEECT--TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred             chheeccccccCCcEEEEEEcCCC--CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEE
Confidence              3356678899999999999951  2789999999999999999875421  12244555  68999999999999999


Q ss_pred             EEeCCCeEEEEEEC
Q psy2762         285 VSCGDNSVSLWKEN  298 (318)
Q Consensus       285 s~~~D~~v~iW~~~  298 (318)
                      +++.||.|+|||+.
T Consensus       352 s~~~dg~i~iwd~~  365 (366)
T 3k26_A          352 AVCDDASIWRWDRL  365 (366)
T ss_dssp             EEETTSEEEEEEC-
T ss_pred             EEeCCCEEEEEEec
Confidence            99999999999964

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2.6e-35  Score=260.53  Aligned_cols=251  Identities=15%  Similarity=0.239  Sum_probs=208.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe--cccccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL--KGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+|...|++++|+|++++|++++ |++|+|||+....        ....+..+  .+|...|.+++|++  ++++|++++
T Consensus        48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  116 (337)
T 1gxr_A           48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG--------NKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGG  116 (337)
T ss_dssp             ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT--------CCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEE
T ss_pred             ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCC--------ceeeeecccccCCCCcEEEEEEcC--CCCEEEEEc
Confidence            47999999999999999999999 9999999996321        11122233  37999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.|++||+.+++......+..|...|.+++|+|+  +.++++++.|+.|++|++....   ....+..|...+..++|
T Consensus       117 ~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~---~~~~~~~~~~~i~~~~~  191 (337)
T 1gxr_A          117 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDI  191 (337)
T ss_dssp             SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEE
T ss_pred             CCCcEEEEECCCCCcceeeecccCCCceEEEEECCC--CCEEEEEeCCCcEEEEeCCCCc---eeeeeecccCceEEEEE
Confidence            999999999988765555667789999999999998  6789999999999999975432   34455678999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+                 +.+|++++.|+.|++||+.+++.....   .|...+.+++|+|+    +.+|++++.|+.
T Consensus       192 ~~~-----------------~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~v~~~~~s~~----~~~l~~~~~~~~  247 (337)
T 1gxr_A          192 SND-----------------GTKLWTGGLDNTVRSWDLREGRQLQQH---DFTSQIFSLGYCPT----GEWLAVGMESSN  247 (337)
T ss_dssp             CTT-----------------SSEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECTT----SSEEEEEETTSC
T ss_pred             CCC-----------------CCEEEEEecCCcEEEEECCCCceEeee---cCCCceEEEEECCC----CCEEEEEcCCCc
Confidence            996                 468999999999999999887654332   46778999999996    789999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      |++|++....   ...+..|...|.+++|+|+|++|++++.||.|++|+...+...
T Consensus       248 i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  300 (337)
T 1gxr_A          248 VEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             EEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEEECCCCC---eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence            9999998754   3455678899999999999999999999999999998776543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2e-35  Score=269.70  Aligned_cols=254  Identities=20%  Similarity=0.352  Sum_probs=206.8

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +...|...|++++|+|++++|++|+.||.|+|||+.           .++.+..+.+|.+.|.+++|.    +.+|++++
T Consensus       129 ~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-----------~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~  193 (401)
T 4aez_A          129 AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-----------SQTKLRTMAGHQARVGCLSWN----RHVLSSGS  193 (401)
T ss_dssp             EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred             eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-----------CCeEEEEecCCCCceEEEEEC----CCEEEEEc
Confidence            445589999999999999999999999999999986           346788899999999999994    57999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|+.|++||+..... ....+.+|...|.+++|+|+  +.++++++.|+.|++||+....   ....+..|...+.+++|
T Consensus       194 ~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~  267 (401)
T 4aez_A          194 RSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSI---PKFTKTNHNAAVKAVAW  267 (401)
T ss_dssp             TTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSS---EEEEECCCSSCCCEEEE
T ss_pred             CCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCC---ccEEecCCcceEEEEEE
Confidence            999999999984332 34456789999999999997  6789999999999999975432   34455689999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEec--CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE--e
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGG--CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--S  243 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs--~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s  243 (318)
                      +|+.                ...+++++  .|+.|++||+.+++...  .+ .|...|.+++|+|+    +.+|+++  +
T Consensus       268 ~p~~----------------~~ll~~~~gs~d~~i~i~d~~~~~~~~--~~-~~~~~v~~~~~s~~----~~~l~~~~g~  324 (401)
T 4aez_A          268 CPWQ----------------SNLLATGGGTMDKQIHFWNAATGARVN--TV-DAGSQVTSLIWSPH----SKEIMSTHGF  324 (401)
T ss_dssp             CTTS----------------TTEEEEECCTTTCEEEEEETTTCCEEE--EE-ECSSCEEEEEECSS----SSEEEEEECT
T ss_pred             CCCC----------------CCEEEEecCCCCCEEEEEECCCCCEEE--EE-eCCCcEEEEEECCC----CCeEEEEeec
Confidence            9963                24677765  89999999998876543  33 36678999999996    7788884  4


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      .|+.|++|+...........+..|...|.+++|+|+|++|++++.||+|++|++..+.....
T Consensus       325 ~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~  386 (401)
T 4aez_A          325 PDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR  386 (401)
T ss_dssp             TTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred             CCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence            89999999987754323334567889999999999999999999999999999888655443

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.9e-35  Score=267.57  Aligned_cols=256  Identities=12%  Similarity=0.147  Sum_probs=200.8

Q ss_pred             eecCCCcceeeeeeecCCC-CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLG-LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ....+|.+.|++++|+|++ ++|++|+.|++|+|||+...         .......+.+|.+.|.+++|++ .++.+|++
T Consensus        67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s  136 (383)
T 3ei3_B           67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ---------NKTSFIQGMGPGDAITGMKFNQ-FNTNQLFV  136 (383)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST---------TCEEEECCCSTTCBEEEEEEET-TEEEEEEE
T ss_pred             EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc---------ccceeeecCCcCCceeEEEeCC-CCCCEEEE
Confidence            3557999999999999999 99999999999999999732         1222333347999999999974 35799999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      ++.|++|++||+.+...........|...|.+++|+|+  +.++++++.|+.|++||+. .   .....+.+|...+.++
T Consensus       137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~-~---~~~~~~~~h~~~v~~~  210 (383)
T 3ei3_B          137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVS--RQMLATGDSTGRLLLLGLD-G---HEIFKEKLHKAKVTHA  210 (383)
T ss_dssp             EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETT--TTEEEEEETTSEEEEEETT-S---CEEEEEECSSSCEEEE
T ss_pred             EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCC--CCEEEEECCCCCEEEEECC-C---CEEEEeccCCCcEEEE
Confidence            99999999999986433222222345588999999998  6789999999999999972 2   2355667899999999


Q ss_pred             eeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC----CeEEEEEEcccCCCCeeEEEEcc-CCCCCccEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG----DKWIEETKLENHSDWVRDVAWAP-SWGLSKCMI  239 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~----~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~~~l  239 (318)
                      +|+|+                 +. +|++++.|++|++||+..    +.+.  ..+ +|...|++++|+| +    +.+|
T Consensus       211 ~~~~~-----------------~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~-~~~~~v~~~~~s~~~----~~~l  266 (383)
T 3ei3_B          211 EFNPR-----------------CDWLMATSSVDATVKLWDLRNIKDKNSYI--AEM-PHEKPVNAAYFNPTD----STKL  266 (383)
T ss_dssp             EECSS-----------------CTTEEEEEETTSEEEEEEGGGCCSTTCEE--EEE-ECSSCEEEEEECTTT----SCEE
T ss_pred             EECCC-----------------CCCEEEEEeCCCEEEEEeCCCCCcccceE--EEe-cCCCceEEEEEcCCC----CCEE
Confidence            99997                 34 799999999999999886    3332  233 6999999999999 6    7899


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeec-----------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTF-----------------DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~-----------------~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ++++.|+.|++||+......  ..+..|                 ...+..++|+|||++  +++.|++|+|||+..+..
T Consensus       267 ~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~  342 (383)
T 3ei3_B          267 LTTDQRNEIRVYSSYDWSKP--DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL  342 (383)
T ss_dssp             EEEESSSEEEEEETTBTTSC--SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE
T ss_pred             EEEcCCCcEEEEECCCCccc--cccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce
Confidence            99999999999998765421  112211                 134556788888877  788999999999887655


Q ss_pred             eEEE
Q psy2762         303 WQCI  306 (318)
Q Consensus       303 ~~~~  306 (318)
                      ...+
T Consensus       343 ~~~l  346 (383)
T 3ei3_B          343 VHQL  346 (383)
T ss_dssp             EEEE
T ss_pred             eeee
Confidence            4443

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-37  Score=289.12  Aligned_cols=260  Identities=11%  Similarity=0.040  Sum_probs=195.5

Q ss_pred             cCCCcceeeeeeecCC------CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762           9 DTGHEDMIHDAEMDYL------GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~------g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      ..+|.+.|.+++|+|+      +.+|||++.||+|+|||+..................++.+|.+.|++++|++   +..
T Consensus       203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~---~~~  279 (524)
T 2j04_B          203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS---PTT  279 (524)
T ss_dssp             EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS---SSE
T ss_pred             EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC---CCe
Confidence            3567889999999997      5799999999999999996321000000000112356889999999999963   358


Q ss_pred             EEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEE--EeeCCCCC-cEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          83 LASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSI--AWAPKEFG-LILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        83 las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~-~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      ||+|+.||+|++||+.++.. +...+.+|...|.+|  +|+|+  + .+||+++.|++|+|||++...   ....+.+|.
T Consensus       280 lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~--g~~~laS~S~D~tvklWD~~~~~---~~~~~~~~~  353 (524)
T 2j04_B          280 VVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDF--EDTVVSTVAVDGYFYIFNPKDIA---TTKTTVSRF  353 (524)
T ss_dssp             EEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTT--SCCEEEEEETTSEEEEECGGGHH---HHCEEEEEC
T ss_pred             EEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCC--CCeEEEEeccCCeEEEEECCCCC---ccccccccc
Confidence            99999999999999986532 223467899999999  56776  4 789999999999999975432   122344565


Q ss_pred             c--ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         160 I--GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       160 ~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      .  .+.+++|+|+                 ++.|++++.|++|+|||++.+.+  ...+.+|...|++|+|+|+    +.
T Consensus       354 ~~~~v~~v~fsp~-----------------~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~----g~  410 (524)
T 2j04_B          354 RGSNLVPVVYCPQ-----------------IYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRL----HP  410 (524)
T ss_dssp             SCCSCCCEEEETT-----------------TTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSS----CC
T ss_pred             ccCcccceEeCCC-----------------cCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCC----CC
Confidence            3  4789999996                 46799999999999999887653  3456789999999999996    78


Q ss_pred             EEEEEeCCCeEEEEEcCCCcc---------------e---------------------------eeEEeeecCCcEEEEE
Q psy2762         238 MIASCSQDRKVIIWTSNDYVT---------------W---------------------------TPFIMNTFDDVVWNVS  275 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~~~---------------~---------------------------~~~~~~~~~~~v~~v~  275 (318)
                      +|+|||.|++|+||+......               +                           ....+.+|..+|++|+
T Consensus       411 ~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Va  490 (524)
T 2j04_B          411 MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTK  490 (524)
T ss_dssp             BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEE
T ss_pred             eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEE
Confidence            899999999999998533110               0                           0112345678899999


Q ss_pred             EcCCCC---EEEEEeCCCeEEEEEECCC
Q psy2762         276 WSLTGD---ILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       276 ~spdg~---~l~s~~~D~~v~iW~~~~~  300 (318)
                      |+|+++   .||+|+.||+||||++.-.
T Consensus       491 fsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          491 WNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             ECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             CCCCCCccHHHHhhccCceEEEEEcccc
Confidence            999964   9999999999999997653

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=6.6e-36  Score=270.15  Aligned_cols=203  Identities=9%  Similarity=0.084  Sum_probs=158.1

Q ss_pred             ccCeEEEEecCCCCCcEEEE--EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762          66 SGPVWQVAWAHPQFGTLLAS--CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTY  143 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las--~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~  143 (318)
                      ...+.+++|++  ||++||+  ++.|++|+|||+.+.+..  ..+. |...|.+|+|+|+  +.++++++.++ +++|+.
T Consensus       133 ~~~~~~v~fSp--Dg~~la~as~~~d~~i~iwd~~~~~~~--~~~~-~~~~V~~v~fspd--g~~l~s~s~~~-~~~~~~  204 (365)
T 4h5i_A          133 DDYTKLVYISR--EGTVAAIASSKVPAIMRIIDPSDLTEK--FEIE-TRGEVKDLHFSTD--GKVVAYITGSS-LEVIST  204 (365)
T ss_dssp             TCCEEEEEECT--TSSCEEEEESCSSCEEEEEETTTTEEE--EEEE-CSSCCCEEEECTT--SSEEEEECSSC-EEEEET
T ss_pred             ccCEEEEEEcC--CCCEEEEEECCCCCEEEEeECCCCcEE--EEeC-CCCceEEEEEccC--CceEEecccee-EEEEEe
Confidence            34578899974  5888764  557999999999987643  3443 7788999999998  77899988665 455554


Q ss_pred             ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----eEEEEEccCCeE--EEEEEcc
Q psy2762         144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----LIKIWKQEGDKW--IEETKLE  217 (318)
Q Consensus       144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~i~iwd~~~~~~--~~~~~~~  217 (318)
                      ..+.. ........|...+..++|+|+                 +.++++++.|+    .+++|+......  .+...+.
T Consensus       205 ~~~~~-~~~~~~~~~~~~v~~v~fspd-----------------g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~  266 (365)
T 4h5i_A          205 VTGSC-IARKTDFDKNWSLSKINFIAD-----------------DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT  266 (365)
T ss_dssp             TTCCE-EEEECCCCTTEEEEEEEEEET-----------------TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred             ccCcc-eeeeecCCCCCCEEEEEEcCC-----------------CCEEEEEecCCcceeEEeecccccceecceeeeeec
Confidence            33321 111223468888999999997                 57899999887    688999876543  2345678


Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +|...|++++|+|+    +.+||+|+.|++|+|||+.+... ....+.+|..+|++|+|||||++|||+|.|++||||++
T Consensus       267 ~~~~~V~~~~~Spd----g~~lasgs~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i  341 (365)
T 4h5i_A          267 NRFKGITSMDVDMK----GELAVLASNDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL  341 (365)
T ss_dssp             SSCSCEEEEEECTT----SCEEEEEETTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred             CCCCCeEeEEECCC----CCceEEEcCCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            99999999999996    88999999999999999987542 11234689999999999999999999999999999998


Q ss_pred             CC
Q psy2762         298 NT  299 (318)
Q Consensus       298 ~~  299 (318)
                      ..
T Consensus       342 p~  343 (365)
T 4h5i_A          342 PL  343 (365)
T ss_dssp             CT
T ss_pred             CC
Confidence            54

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1e-34  Score=256.77  Aligned_cols=241  Identities=15%  Similarity=0.213  Sum_probs=205.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +|...|++++|+|++++|++++.|++|++||+...         .......+..|...|.+++|++  ++++|++++.|+
T Consensus        95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---------~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg  163 (337)
T 1gxr_A           95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---------TPRIKAELTSSAPACYALAISP--DSKVCFSCCSDG  163 (337)
T ss_dssp             CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEEEECT--TSSEEEEEETTS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---------CcceeeecccCCCceEEEEECC--CCCEEEEEeCCC
Confidence            79999999999999999999999999999999732         2235677889999999999974  589999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .|++||+.+++  ....+..|...|.+++|+|+  +.++++++.|+.|++||+....    ......|..++..++|+|+
T Consensus       164 ~v~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~v~~~~~s~~  235 (337)
T 1gxr_A          164 NIAVWDLHNQT--LVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGR----QLQQHDFTSQIFSLGYCPT  235 (337)
T ss_dssp             CEEEEETTTTE--EEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----EEEEEECSSCEEEEEECTT
T ss_pred             cEEEEeCCCCc--eeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCc----eEeeecCCCceEEEEECCC
Confidence            99999998875  34456789999999999998  6789999999999999974432    2223357778899999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +.+|++++.|+.|++||+.+++.   ..+..|...|.+++|+|+    +.+|++++.|+.|++
T Consensus       236 -----------------~~~l~~~~~~~~i~~~~~~~~~~---~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~~  291 (337)
T 1gxr_A          236 -----------------GEWLAVGMESSNVEVLHVNKPDK---YQLHLHESCVLSLKFAYC----GKWFVSTGKDNLLNA  291 (337)
T ss_dssp             -----------------SSEEEEEETTSCEEEEETTSSCE---EEECCCSSCEEEEEECTT----SSEEEEEETTSEEEE
T ss_pred             -----------------CCEEEEEcCCCcEEEEECCCCCe---EEEcCCccceeEEEECCC----CCEEEEecCCCcEEE
Confidence                             46899999999999999987753   356789999999999996    789999999999999


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      |++.....   .....+...|.+++|+|++++|++++.||.|++|++
T Consensus       292 ~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          292 WRTPYGAS---IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EETTTCCE---EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EECCCCeE---EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            99987542   234457889999999999999999999999999986

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=5.5e-35  Score=265.14  Aligned_cols=266  Identities=16%  Similarity=0.243  Sum_probs=205.6

Q ss_pred             eeecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-----ecccccCeEEEEecCCCC
Q psy2762           6 NLVDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-----LKGHSGPVWQVAWAHPQF   79 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~~h~~~V~~v~~~~~~~   79 (318)
                      ..+..+|.+.|++++|+| ++++|++|+.||+|+|||+.........   .......     ..+|.+.|.+++|++ .+
T Consensus        36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~  111 (408)
T 4a11_B           36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYY---TCKAVCSIGRDHPDVHRYSVETVQWYP-HD  111 (408)
T ss_dssp             EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCE---EECEEEEECTTCTTCCSSCEEEEEECT-TC
T ss_pred             eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceE---eccccccccccccccCCCcEEEEEEcc-CC
Confidence            346678999999999999 9999999999999999999743110000   0000111     136999999999974 35


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      +.+|++++.|+.|++||+.+++......   +...+.++.++|.. .+.++++++.|+.|++|++....   ....+..|
T Consensus       112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~  185 (408)
T 4a11_B          112 TGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS---CSHILQGH  185 (408)
T ss_dssp             TTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC---CCEEECCC
T ss_pred             CcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc---eeeeecCC
Confidence            7899999999999999999876544332   67889999999863 24589999999999999985543   24456689


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc---------------ccCCCCe
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL---------------ENHSDWV  223 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~---------------~~h~~~V  223 (318)
                      ..++.+++|+|+.                ...|++++.|+.|++||++.+.. ....+               .+|...|
T Consensus       186 ~~~v~~~~~~~~~----------------~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v  248 (408)
T 4a11_B          186 RQEILAVSWSPRY----------------DYILATASADSRVKLWDVRRASG-CLITLDQHNGKKSQAVESANTAHNGKV  248 (408)
T ss_dssp             CSCEEEEEECSSC----------------TTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred             CCcEEEEEECCCC----------------CcEEEEEcCCCcEEEEECCCCCc-ccccccccccccceeeccccccccCce
Confidence            9999999999973                12589999999999999876531 11222               5789999


Q ss_pred             eEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc---------------------------------------------
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT---------------------------------------------  258 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~---------------------------------------------  258 (318)
                      ++++|+|+    +.+|++++.|+.|++|++.....                                             
T Consensus       249 ~~~~~~~~----~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~  324 (408)
T 4a11_B          249 NGLCFTSD----GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG  324 (408)
T ss_dssp             EEEEECTT----SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred             eEEEEcCC----CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence            99999996    88999999999999999876321                                             


Q ss_pred             eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         259 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       259 ~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .....+.+|...|.+++|+|+|++|++++.||.|++|+.+....
T Consensus       325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~  368 (408)
T 4a11_B          325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP  368 (408)
T ss_dssp             CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred             cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence            11223456788999999999999999999999999999987644

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=4.4e-35  Score=267.85  Aligned_cols=265  Identities=15%  Similarity=0.105  Sum_probs=201.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+| ..+....|+|++++|++|+.|++|+|||+.           .+.....+.+|.+.|++++|++  ++++|++|+.|
T Consensus        95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~d  160 (420)
T 3vl1_A           95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN-----------FNLQREIDQAHVSEITKLKFFP--SGEALISSSQD  160 (420)
T ss_dssp             CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT-----------SCEEEEETTSSSSCEEEEEECT--TSSEEEEEETT
T ss_pred             ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC-----------CcceeeecccccCccEEEEECC--CCCEEEEEeCC
Confidence            344 455566789999999999999999999986           3466777889999999999974  58999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec---ccccccceee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA---AHTIGCNAVS  166 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~---~h~~~v~~~~  166 (318)
                      ++|++||+.+++..  ..+.+|...|.+++|+|+  +.++++++.|+.|++||+....   ....+.   .|..++..+.
T Consensus       161 ~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~  233 (420)
T 3vl1_A          161 MQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGT---TIHTFNRKENPHDGVNSIA  233 (420)
T ss_dssp             SEEEEEETTTCCCC--EEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTE---EEEEECBTTBTTCCEEEEE
T ss_pred             CeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCc---eeEEeecCCCCCCCccEEE
Confidence            99999999877643  346689999999999998  6789999999999999975442   222333   3555666666


Q ss_pred             eCCCCCCCccc----cccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEE
Q psy2762         167 WGPGIGSLSEL----DLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIAS  241 (318)
Q Consensus       167 ~~p~~~~~~~~----~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s  241 (318)
                      |.|........    ....-.+...+.+|++|+.|+.|++||+.+++... ....+|...|++++|+|+    +. +|++
T Consensus       234 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~l~~  308 (420)
T 3vl1_A          234 LFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI-QLPSKFTCSCNSLTVDGN----NANYIYA  308 (420)
T ss_dssp             EEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE-EECCTTSSCEEEEEECSS----CTTEEEE
T ss_pred             EecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE-EcccccCCCceeEEEeCC----CCCEEEE
Confidence            65542211000    00011122236789999999999999998876432 334578899999999996    55 9999


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ++.|+.|++||+...... ...+.. +...|..+.| |++++|++++.|++|++|++....+
T Consensus       309 g~~dg~i~vwd~~~~~~~-~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~  368 (420)
T 3vl1_A          309 GYENGMLAQWDLRSPECP-VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPES  368 (420)
T ss_dssp             EETTSEEEEEETTCTTSC-SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTC
T ss_pred             EeCCCeEEEEEcCCCcCc-hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCC
Confidence            999999999999875421 233444 6678888855 5888999999999999999887543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-36  Score=286.03  Aligned_cols=251  Identities=11%  Similarity=0.105  Sum_probs=190.4

Q ss_pred             CcceeeeeeecCCC---------CEEEE-------------------eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec
Q psy2762          12 HEDMIHDAEMDYLG---------LYLAT-------------------CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK   63 (318)
Q Consensus        12 H~~~v~~~~~~~~g---------~~l~s-------------------~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~   63 (318)
                      +.+.|.+++|+|++         ++||+                   ++.|++|+|||+....       .......++.
T Consensus       132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~-------~~~~~~~~l~  204 (524)
T 2j04_B          132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTST-------LHCVKVQTIV  204 (524)
T ss_dssp             CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTT-------CCEEEEEEEE
T ss_pred             CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCC-------CCceEEEEEE
Confidence            46788888888876         55555                   6688999999986320       0111234577


Q ss_pred             ccccCeEEEEecCC----CCCcEEEEEECCCeEEEEeCCCCcEE---------EEEEecCCCcCeEEEEeeCCCCCcEEE
Q psy2762          64 GHSGPVWQVAWAHP----QFGTLLASCSYDRKVIIWRGDNGNWF---------KYYEYNNHDSSVNSIAWAPKEFGLILA  130 (318)
Q Consensus        64 ~h~~~V~~v~~~~~----~~~~~las~s~Dg~v~vWd~~~~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~la  130 (318)
                      +|.+.|++++|++.    .++.+|||++.||+|+|||+..+...         +...+.+|...|.+++|+|+  + .|+
T Consensus       205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~-~la  281 (524)
T 2j04_B          205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--T-TVV  281 (524)
T ss_dssp             ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--S-EEE
T ss_pred             ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--C-eEE
Confidence            88999999999753    13679999999999999998765311         12356789999999999985  3 699


Q ss_pred             EeecCCeEEEEEeecCCCCcceeeeccccccccee--eeCCCCCCCccccccCCCCCCcc-ceEEEecCCCeEEEEEccC
Q psy2762         131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV--SWGPGIGSLSELDLKGSKLGGVA-KRLVSGGCDNLIKIWKQEG  207 (318)
Q Consensus       131 sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~~~~~~~~~~~~~~~-~~lasgs~d~~i~iwd~~~  207 (318)
                      +|+.||+|++||+.....  ....+.+|..+|.++  +|+|+                 + ++|||||.|++|||||+++
T Consensus       282 sgs~DgtV~lWD~~~~~~--~~~~~~~H~~~V~sv~~~~s~~-----------------g~~~laS~S~D~tvklWD~~~  342 (524)
T 2j04_B          282 CGFKNGFVAEFDLTDPEV--PSFYDQVHDSYILSVSTAYSDF-----------------EDTVVSTVAVDGYFYIFNPKD  342 (524)
T ss_dssp             EEETTSEEEEEETTBCSS--CSEEEECSSSCEEEEEEECCTT-----------------SCCEEEEEETTSEEEEECGGG
T ss_pred             EEeCCCEEEEEECCCCCC--ceEEeecccccEEEEEEEcCCC-----------------CCeEEEEeccCCeEEEEECCC
Confidence            999999999999854321  223466899999998  56764                 3 5799999999999999886


Q ss_pred             CeEEEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEE
Q psy2762         208 DKWIEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTV  285 (318)
Q Consensus       208 ~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s  285 (318)
                      +++.  ..+.+|..  .|.+|+|+|+    +..|++++.|++|++||+.....  ...+.+|.+.|++|+|||+|++|+|
T Consensus       343 ~~~~--~~~~~~~~~~~v~~v~fsp~----~~~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~~l~S  414 (524)
T 2j04_B          343 IATT--KTTVSRFRGSNLVPVVYCPQ----IYSYIYSDGASSLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHPMVLA  414 (524)
T ss_dssp             HHHH--CEEEEECSCCSCCCEEEETT----TTEEEEECSSSEEEEEETTCTTC--CEEEEECSSCEEEEECCSSCCBCEE
T ss_pred             CCcc--cccccccccCcccceEeCCC----cCeEEEeCCCCcEEEEECccccc--ceeeecCCCceEEEEeCCCCCeEEE
Confidence            5432  23345543  4889999996    67899999999999999887542  3446689999999999999999999


Q ss_pred             EeCCCeEEEEEECC
Q psy2762         286 SCGDNSVSLWKENT  299 (318)
Q Consensus       286 ~~~D~~v~iW~~~~  299 (318)
                      |+.|++|+||+...
T Consensus       415 gs~Dgtv~lwd~~~  428 (524)
T 2j04_B          415 GSADGSLIITNAAR  428 (524)
T ss_dssp             EETTTEEECCBSCS
T ss_pred             EECCCEEEEEechH
Confidence            99999999998643

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.9e-35  Score=263.70  Aligned_cols=218  Identities=25%  Similarity=0.496  Sum_probs=182.1

Q ss_pred             ceEEEEeccccc-CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          56 GTLIAELKGHSG-PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        56 ~~~~~~~~~h~~-~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      ..++.++++|.+ .|++++|++  ++++||+|+.|++|+|||+.++....... ..+|...|.+++|+|+  +.+|++|+
T Consensus         5 ~~~~~~~~~h~~~~v~~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s   80 (345)
T 3fm0_A            5 LVLLGRVPAHPDSRCWFLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASAS   80 (345)
T ss_dssp             EEEEEEECCSTTSCEEEEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEE
T ss_pred             EEEeeeecCCCCCcEEEEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEE
Confidence            357889999998 999999974  59999999999999999998775443333 3679999999999998  77999999


Q ss_pred             cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EEE
Q psy2762         134 SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WIE  212 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~~  212 (318)
                      .|++|++|+...... .....+.+|..+|.+++|+|+                 +.+|++|+.|++|+|||+..+. ...
T Consensus        81 ~D~~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~sp~-----------------~~~l~s~s~D~~v~iwd~~~~~~~~~  142 (345)
T 3fm0_A           81 FDATTCIWKKNQDDF-ECVTTLEGHENEVKSVAWAPS-----------------GNLLATCSRDKSVWVWEVDEEDEYEC  142 (345)
T ss_dssp             TTSCEEEEEECCC-E-EEEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred             CCCcEEEEEccCCCe-EEEEEccCCCCCceEEEEeCC-----------------CCEEEEEECCCeEEEEECCCCCCeEE
Confidence            999999999754321 123456789999999999997                 4789999999999999987653 233


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV  292 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v  292 (318)
                      ...+.+|...|++++|+|+    +.+|++++.|++|++|+...........+.+|...|++++|+|+|++|++++.|++|
T Consensus       143 ~~~~~~h~~~v~~~~~~p~----~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v  218 (345)
T 3fm0_A          143 VSVLNSHTQDVKHVVWHPS----QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV  218 (345)
T ss_dssp             EEEECCCCSCEEEEEECSS----SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEEecCcCCCeEEEEECCC----CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence            5567899999999999996    789999999999999998764322234567889999999999999999999999999


Q ss_pred             EEEEECC
Q psy2762         293 SLWKENT  299 (318)
Q Consensus       293 ~iW~~~~  299 (318)
                      +||+...
T Consensus       219 ~iW~~~~  225 (345)
T 3fm0_A          219 RIWRQYL  225 (345)
T ss_dssp             EEEEEEC
T ss_pred             EEecccc
Confidence            9999743

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=4.1e-35  Score=265.96  Aligned_cols=262  Identities=13%  Similarity=0.145  Sum_probs=207.7

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC----C-
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF----G-   80 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~----~-   80 (318)
                      .....+|.+.|++++|+|  ++|++|+.||+|+|||+.....     ......+..+.+|...|++++|++  +    + 
T Consensus         9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~g~   79 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFVHKSGLHHVDVLQ--AIERDAF   79 (397)
T ss_dssp             EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT-----CCGGGGEEEEECCTTCEEEEEEEE--EEETTTE
T ss_pred             hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccc-----ccCCCcceEEecCCCcEEEEEEec--ccccCCc
Confidence            446689999999999999  8999999999999999973210     001224677889999999999973  4    7 


Q ss_pred             --cEEEEEECCCeEEEEeCCCCcE---EEEEEecCC-----CcCeEEEEee----CCCCCcE-EEEeecCCeEEEEEeec
Q psy2762          81 --TLLASCSYDRKVIIWRGDNGNW---FKYYEYNNH-----DSSVNSIAWA----PKEFGLI-LACGSSDGTISFLTYMS  145 (318)
Q Consensus        81 --~~las~s~Dg~v~vWd~~~~~~---~~~~~~~~h-----~~~v~~v~~~----p~~~~~~-lasgs~d~~i~i~~~~~  145 (318)
                        .+|++++.|+.|++||+.++..   .....+..|     ...|.+++|+    |+  +.+ +++++.|+.|++|++..
T Consensus        80 ~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~  157 (397)
T 1sq9_A           80 ELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHP  157 (397)
T ss_dssp             EEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEES
T ss_pred             cccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCc
Confidence              8999999999999999876652   113445667     5899999999    87  667 99999999999999876


Q ss_pred             ------CCCCc-ce-eee-------cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE
Q psy2762         146 ------DTNSW-ES-RKI-------AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW  210 (318)
Q Consensus       146 ------~~~~~-~~-~~~-------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~  210 (318)
                            ..... .. ..+       ..|...+.+++|+|+                 + +|++++.|+.|++||+.+++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~-~l~~~~~dg~i~i~d~~~~~~  219 (397)
T 1sq9_A          158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-----------------G-LIATGFNNGTVQISELSTLRP  219 (397)
T ss_dssp             SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT-----------------S-EEEEECTTSEEEEEETTTTEE
T ss_pred             cccccccceeeccCcceeeeeeccccCCCCCceEEEECCC-----------------c-eEEEEeCCCcEEEEECCCCce
Confidence                  32111 00 033       347888999999996                 6 899999999999999988754


Q ss_pred             EEEEEccc---C---CCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeee-------------cC
Q psy2762         211 IEETKLEN---H---SDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNT-------------FD  268 (318)
Q Consensus       211 ~~~~~~~~---h---~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~-------------~~  268 (318)
                        ...+..   |   ...|++++|+|+    +.+|++++.|   +.|++||+....  ....+..             |.
T Consensus       220 --~~~~~~~~~h~~~~~~i~~i~~~~~----~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~  291 (397)
T 1sq9_A          220 --LYNFESQHSMINNSNSIRSVKFSPQ----GSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHS  291 (397)
T ss_dssp             --EEEEECCC---CCCCCEEEEEECSS----TTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBS
T ss_pred             --eEEEeccccccccCCccceEEECCC----CCEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccC
Confidence              345566   8   999999999996    7899999999   999999997654  2344555             88


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      ..|.+++|+|++++|++++.|+.|+|||+..+....
T Consensus       292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  327 (397)
T 1sq9_A          292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT  327 (397)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence            999999999999999999999999999987764333

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=272.85  Aligned_cols=266  Identities=15%  Similarity=0.213  Sum_probs=198.1

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc------------cCeEEEEecCCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS------------GPVWQVAWAHPQ   78 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~v~~~~~~   78 (318)
                      .|.+.|++++|+|+|++||+|+.||+|+|||+...............++..+.+|.            +.|++++|++..
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            46899999999999999999999999999999743111111112234678899998            889999997532


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCcEE-------------------------------------EEEE-ecCCCcCeEEEEe
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGNWF-------------------------------------KYYE-YNNHDSSVNSIAW  120 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~~~-------------------------------------~~~~-~~~h~~~v~~v~~  120 (318)
                      +..+|++++.|++|++||+..+...                                     +... ..+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence            2279999999999999998653221                                     0112 3579999999999


Q ss_pred             eCCCCCcEEEEeecCCeEEEEEeecCCCCcce-----eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec
Q psy2762         121 APKEFGLILACGSSDGTISFLTYMSDTNSWES-----RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG  195 (318)
Q Consensus       121 ~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs  195 (318)
                      +|+  +.++++| .|+.|++||+.........     ..+.+|...+.+++|+|+.                ..+|++|+
T Consensus       186 ~~~--~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~----------------~~~l~s~~  246 (447)
T 3dw8_B          186 NSD--YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS----------------CNTFVYSS  246 (447)
T ss_dssp             CTT--SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC----------------TTEEEEEE
T ss_pred             cCC--CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC----------------CcEEEEEe
Confidence            998  6788888 7999999997422211110     1245889999999999962                16899999


Q ss_pred             CCCeEEEEEccCCeEE--EEEEcccCCC------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC-Cccee
Q psy2762         196 CDNLIKIWKQEGDKWI--EETKLENHSD------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWT  260 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~--~~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~-~~~~~  260 (318)
                      .|++|+|||+.+++..  ....+.+|..            .|.+++|+|+    +.+|++++. +.|+|||+.. ...  
T Consensus       247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~~~~-~~v~iwd~~~~~~~--  319 (447)
T 3dw8_B          247 SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS----GRYMMTRDY-LSVKVWDLNMENRP--  319 (447)
T ss_dssp             TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT----SSEEEEEES-SEEEEEETTCCSSC--
T ss_pred             CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC----CCEEEEeeC-CeEEEEeCCCCccc--
Confidence            9999999998876521  0345667765            8999999996    889999999 9999999975 321  


Q ss_pred             eEEeeecCCc---------------EEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         261 PFIMNTFDDV---------------VWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       261 ~~~~~~~~~~---------------v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ...+..|...               +.+++|+|+|++|++++.||.|+|||+..+..
T Consensus       320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~  376 (447)
T 3dw8_B          320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD  376 (447)
T ss_dssp             SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred             cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence            2223334321               33599999999999999999999999877543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=3.6e-34  Score=251.62  Aligned_cols=250  Identities=19%  Similarity=0.327  Sum_probs=203.0

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|...|++++|+|+|++|++|+.|++|+|||+.           .++.+.++.+|...+.++.+.    +..|++++.
T Consensus        63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~-----------~~~~~~~~~~h~~~~~~~~~~----~~~l~s~~~  127 (318)
T 4ggc_A           63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-----------QQKRLRNMTSHSARVGSLSWN----SYILSSGSR  127 (318)
T ss_dssp             CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEE----TTEEEEEET
T ss_pred             ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-----------CceeEEEecCccceEEEeecC----CCEEEEEec
Confidence            35789999999999999999999999999999997           457889999999999888763    689999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-eeeecccccccceeee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-SRKIAAHTIGCNAVSW  167 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-~~~~~~h~~~v~~~~~  167 (318)
                      ++.+++|+...... ....+.+|...+.+++++++  +.++++++.|++|++||......... ......|...+..+.+
T Consensus       128 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~  204 (318)
T 4ggc_A          128 SGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW  204 (318)
T ss_dssp             TSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE
T ss_pred             CCceEeeecCCCce-eEEEEcCccCceEEEEEcCC--CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe
Confidence            99999999876542 44456789999999999998  67899999999999999865442211 2233467778888999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE--eCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC--SQD  245 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~--s~D  245 (318)
                      +|....              ...+++++.+++|++||........   ...+...+..+.|+|.    +..++++  +.|
T Consensus       205 ~~~~~~--------------~~~~~~~~~~~~i~lwd~~~~~~~~---~~~~~~~v~~~~~~~~----~~~~~~~sg~~d  263 (318)
T 4ggc_A          205 CPWQSN--------------VLATGGGTSDRHIRIWNVCSGACLS---AVDAHSQVCSILWSPH----YKELISGHGFAQ  263 (318)
T ss_dssp             CTTSTT--------------EEEEEECTTTCEEEEEETTTCCEEE---EEECSSCEEEEEEETT----TTEEEEEECTTT
T ss_pred             cCCCCc--------------EEEEEecCCCCEEEEEecccccccc---cccceeeeeeeeeccc----ccceEEEEEcCC
Confidence            886421              1346788999999999988765432   2356777999999996    4455544  489


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++|+|||+.+..  ....+.+|.+.|.+++|+|||++|+|++.|++|||||+..
T Consensus       264 ~~i~iwd~~~~~--~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          264 NQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  315 (318)
T ss_dssp             CCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             CEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence            999999998754  3456778999999999999999999999999999999754

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=6.6e-35  Score=288.19  Aligned_cols=257  Identities=16%  Similarity=0.210  Sum_probs=216.2

Q ss_pred             cceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           4 QLNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         4 ~~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .+.+.+.+|.+.|.+++|+|+|++|++|+.||+|+|||+.           .+..+..+.+|.+.|.+++|++  ++++|
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l   70 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYE-----------TQVEVRSIQVTETPVRAGKFIA--RKNWI   70 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TTEEEEEEECCSSCEEEEEEEG--GGTEE
T ss_pred             ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECC-----------CCceEEEEecCCCcEEEEEEeC--CCCEE
Confidence            3455678999999999999999999999999999999986           3577889999999999999974  58999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      ++++.||.|+|||+.+++.  ...+.+|...|.+++|+|+  +.++++++.|+.|++|++..+.  .....+.+|..++.
T Consensus        71 ~~~~~dg~i~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~  144 (814)
T 3mkq_A           71 IVGSDDFRIRVFNYNTGEK--VVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVM  144 (814)
T ss_dssp             EEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEE
T ss_pred             EEEeCCCeEEEEECCCCcE--EEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEE
Confidence            9999999999999988864  3456789999999999998  6789999999999999985432  22345568999999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc-ccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      +++|+|..                +..|++++.|++|++||+..+...  ..+ ..|...|.+++|+|.  .++.+|+++
T Consensus       145 ~~~~~p~~----------------~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~--~~~~~l~~~  204 (814)
T 3mkq_A          145 CVAFNPKD----------------PSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPL--PDKPYMITA  204 (814)
T ss_dssp             EEEEETTE----------------EEEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCS--TTCCEEEEE
T ss_pred             EEEEEcCC----------------CCEEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEEC--CCCCEEEEE
Confidence            99999931                468999999999999998766432  223 344588999999993  137899999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.|++|++|+.....  ....+..|...|.+++|+|+|++|++++.||+|++|+...+.
T Consensus       205 ~~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~  261 (814)
T 3mkq_A          205 SDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK  261 (814)
T ss_dssp             CTTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred             eCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence            999999999987653  344566788899999999999999999999999999977653

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.7e-35  Score=272.94  Aligned_cols=268  Identities=21%  Similarity=0.353  Sum_probs=210.6

Q ss_pred             ecCCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEEE
Q psy2762           8 VDTGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~las   85 (318)
                      ...+|.+.|++++|+|+ +.+|++++.||+|+|||+........ .......+..+.+|.+.|++++|++.  +. +|++
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s  199 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-PSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLS  199 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-TTCCCCCSEEEECCSSCCCCEEECTT--STTEEEE
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-ccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEE
Confidence            34579999999999997 78999999999999999963211100 00113456788899999999999743  55 9999


Q ss_pred             EECCCeEEEEeCCCCc----E-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc
Q psy2762          86 CSYDRKVIIWRGDNGN----W-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~----~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      |+.||+|++||+..+.    . .....+.+|...|.+++|+|++ +.++++++.|+.|++||++..........+..|..
T Consensus       200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~  278 (430)
T 2xyi_A          200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA  278 (430)
T ss_dssp             ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred             EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence            9999999999997632    1 1133456899999999999954 57899999999999999865432223345568999


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      +++.++|+|+.                ...|++|+.|+.|+|||++... .....+.+|...|.+++|+|+   ...+|+
T Consensus       279 ~v~~i~~~p~~----------------~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~---~~~~l~  338 (430)
T 2xyi_A          279 EVNCLSFNPYS----------------EFILATGSADKTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPH---NETILA  338 (430)
T ss_dssp             CEEEEEECSSC----------------TTEEEEEETTSEEEEEETTCTT-SCSEEEECCSSCEEEEEECSS---CTTEEE
T ss_pred             CeEEEEeCCCC----------------CCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCC---CCCEEE
Confidence            99999999963                2369999999999999988632 134567789999999999997   346899


Q ss_pred             EEeCCCeEEEEEcCCCcc------------eeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECC
Q psy2762         241 SCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~------------~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~  299 (318)
                      +++.|+.|+||++.....            .......+|...|.+++|+|+++ +|++++.||.|+||++..
T Consensus       339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence            999999999999876221            12334456788999999999999 899999999999999765

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=262.71  Aligned_cols=256  Identities=13%  Similarity=0.145  Sum_probs=201.0

Q ss_pred             cCCCcceeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC----CCCCc
Q psy2762           9 DTGHEDMIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH----PQFGT   81 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~----~~~~~   81 (318)
                      ..+|...|++++|+|+   |++|++|+.|++|++||+...          ...+..+.+|.+.|.++.|.+    ..+++
T Consensus        61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~  130 (357)
T 3i2n_A           61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAP----------EMPVYSVKGHKEIINAIDGIGGLGIGEGAP  130 (357)
T ss_dssp             EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSC----------SSCSEEECCCSSCEEEEEEESGGGCC-CCC
T ss_pred             eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCC----------CccEEEEEecccceEEEeeccccccCCCcc
Confidence            3479999999999998   799999999999999999732          125677889999999997642    13588


Q ss_pred             EEEEEECCCeEEEEeCCCCc-EEEEEEecCCC----cCeEEEE----eeCCCCCcEEEEeecCCeEEEEEeecCCCCcce
Q psy2762          82 LLASCSYDRKVIIWRGDNGN-WFKYYEYNNHD----SSVNSIA----WAPKEFGLILACGSSDGTISFLTYMSDTNSWES  152 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~-~~~~~~~~~h~----~~v~~v~----~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~  152 (318)
                      +|++++.|++|++||+.++. ...  .+..|.    ..+.+++    |+|+  +.++++++.|+.|++||+....    .
T Consensus       131 ~l~~~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~----~  202 (357)
T 3i2n_A          131 EIVTGSRDGTVKVWDPRQKDDPVA--NMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMA----L  202 (357)
T ss_dssp             EEEEEETTSCEEEECTTSCSSCSE--EECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTE----E
T ss_pred             EEEEEeCCCeEEEEeCCCCCCcce--eccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCc----e
Confidence            99999999999999998764 223  233333    3799998    6777  6789999999999999974432    3


Q ss_pred             eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---EEEEcccCCCCeeEEEEc
Q psy2762         153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---EETKLENHSDWVRDVAWA  229 (318)
Q Consensus       153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---~~~~~~~h~~~V~~v~~s  229 (318)
                      .....|...+..+.|+|...              .+.+|++++.|+.|++||+.+++..   ....+.+|...|++++|+
T Consensus       203 ~~~~~~~~~v~~~~~~~~~~--------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~  268 (357)
T 3i2n_A          203 RWETNIKNGVCSLEFDRKDI--------------SMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL  268 (357)
T ss_dssp             EEEEECSSCEEEEEESCSSS--------------SCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE
T ss_pred             eeecCCCCceEEEEcCCCCC--------------CCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC
Confidence            34457888999999999210              0468999999999999998764321   122345899999999999


Q ss_pred             cCCCCCcc-EEEEEeCCCeEEEEEcCCCcce-----------------eeEEeeecCCcEEEEEEcCCCCEEE-EEeCCC
Q psy2762         230 PSWGLSKC-MIASCSQDRKVIIWTSNDYVTW-----------------TPFIMNTFDDVVWNVSWSLTGDILT-VSCGDN  290 (318)
Q Consensus       230 p~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~-----------------~~~~~~~~~~~v~~v~~spdg~~l~-s~~~D~  290 (318)
                      |+    +. +|++++.|+.|++|++......                 ....+..|...|.+++|+|+|++|+ +++.|+
T Consensus       269 ~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~  344 (357)
T 3i2n_A          269 PQ----NRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ  344 (357)
T ss_dssp             TT----EEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred             CC----CCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC
Confidence            96    66 8999999999999998753211                 2334567889999999999999998 899999


Q ss_pred             eEEEEEECCC
Q psy2762         291 SVSLWKENTD  300 (318)
Q Consensus       291 ~v~iW~~~~~  300 (318)
                      .|+||++...
T Consensus       345 ~i~iw~~~~~  354 (357)
T 3i2n_A          345 TVRVLIVTKL  354 (357)
T ss_dssp             EEEEEEECC-
T ss_pred             cEEEEECCCc
Confidence            9999998764

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-35  Score=270.70  Aligned_cols=268  Identities=14%  Similarity=0.129  Sum_probs=203.0

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +..+|.+.|++++|+| ++++|++|+.||+|+|||+......     ........+ +|.+.|++++|++  ++.+|++|
T Consensus        58 ~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-----~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~  129 (437)
T 3gre_A           58 LMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-----EVYSSSLTY-DCSSTVTQITMIP--NFDAFAVS  129 (437)
T ss_dssp             ECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-----CCCSCSEEE-ECSSCEEEEEECT--TSSEEEEE
T ss_pred             eccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC-----cccceeeec-cCCCCEEEEEEeC--CCCEEEEE
Confidence            4479999999999999 9999999999999999998631000     001112223 5999999999973  58999999


Q ss_pred             ECCCeEEEEeCC---CCcEEEE--------EEecC--CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          87 SYDRKVIIWRGD---NGNWFKY--------YEYNN--HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        87 s~Dg~v~vWd~~---~~~~~~~--------~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                      +.||+|++||+.   .++....        ..+..  +...+.++.+.....+.++++++.|+.|++||+....   ...
T Consensus       130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~  206 (437)
T 3gre_A          130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE---RLQ  206 (437)
T ss_dssp             ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC---EEE
T ss_pred             eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe---eeE
Confidence            999999999984   3332221        11222  4566777774422227899999999999999985443   344


Q ss_pred             eecc--cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccC
Q psy2762         154 KIAA--HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPS  231 (318)
Q Consensus       154 ~~~~--h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~  231 (318)
                      .+..  |...+.+++|+|+                 +.+|++|+.|++|+|||++.+++.....+ .|...|++++|+|.
T Consensus       207 ~~~~~~h~~~v~~~~~s~~-----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~  268 (437)
T 3gre_A          207 IIENSPRHGAVSSICIDEE-----------------CCVLILGTTRGIIDIWDIRFNVLIRSWSF-GDHAPITHVEVCQF  268 (437)
T ss_dssp             EEECCGGGCCEEEEEECTT-----------------SCEEEEEETTSCEEEEETTTTEEEEEEBC-TTCEEEEEEEECTT
T ss_pred             EEccCCCCCceEEEEECCC-----------------CCEEEEEcCCCeEEEEEcCCccEEEEEec-CCCCceEEEEeccc
Confidence            5555  8899999999997                 47899999999999999988765433222 67778999999998


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------------------------e--cCCcEEEEEEcCCCCEEEE
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------------------------T--FDDVVWNVSWSLTGDILTV  285 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------------------------~--~~~~v~~v~~spdg~~l~s  285 (318)
                      ++.++.+|++++.|++|+|||+......  ..+.                        +  |...|.+++|+ ++++|++
T Consensus       269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s  345 (437)
T 3gre_A          269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQ--YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT  345 (437)
T ss_dssp             TCTTEEEEEEESTTEEEEEEETTTTEEE--EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE
T ss_pred             cCCCccEEEEEcCCCcEEEEEcCCCcEE--EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe
Confidence            7778899999999999999999865421  1111                        1  55678899999 7899999


Q ss_pred             EeCCCeEEEEEECCCCceEEEe
Q psy2762         286 SCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       286 ~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      ++.|+.|++||+..+.....+.
T Consensus       346 ~~~d~~i~~wd~~~~~~~~~~~  367 (437)
T 3gre_A          346 DEATSSIVMFSLNELSSSKAVI  367 (437)
T ss_dssp             EGGGTEEEEEETTCGGGCEEEE
T ss_pred             cCCCCeEEEEECCCcccceEEe
Confidence            9999999999988765554443

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.7e-36  Score=272.15  Aligned_cols=258  Identities=14%  Similarity=0.231  Sum_probs=209.7

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|...|++++|+|++++|++|+.|++|+|||+....       .....+..+.+|.+.|++++|++ ..+.+|++++.|
T Consensus        64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d  135 (416)
T 2pm9_A           64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEAN-------NAINSMARFSNHSSSVKTVKFNA-KQDNVLASGGNN  135 (416)
T ss_dssp             CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTT-------SCCCEEEECCCSSSCCCEEEECS-SSTTBEEEECSS
T ss_pred             EecCCceEEEEECCCCCeEEEEccCCeEEEeeccccc-------ccccchhhccCCccceEEEEEcC-CCCCEEEEEcCC
Confidence            4689999999999999999999999999999996310       11246788999999999999964 347899999999


Q ss_pred             CeEEEEeCCCCc------EE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc----
Q psy2762          90 RKVIIWRGDNGN------WF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH----  158 (318)
Q Consensus        90 g~v~vWd~~~~~------~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h----  158 (318)
                      ++|++||+.+..      .. ....+..|...|.+++|+|+. +.++++++.|+.|++||+....   ....+..|    
T Consensus       136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~~  211 (416)
T 2pm9_A          136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKK---EVIHLSYTSPNS  211 (416)
T ss_dssp             SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTE---EEEEECCCCCSS
T ss_pred             CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCC---cceEEecccccc
Confidence            999999998764      11 112235688999999999974 4689999999999999975432   23333333    


Q ss_pred             --ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---eEEEEEccCCeEEEEEEcc-cCCCCeeEEEEccCC
Q psy2762         159 --TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---LIKIWKQEGDKWIEETKLE-NHSDWVRDVAWAPSW  232 (318)
Q Consensus       159 --~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---~i~iwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~  232 (318)
                        ...+.+++|+|+.                ..+|++++.|+   .|++||+..+.. ....+. +|...|++++|+|. 
T Consensus       212 ~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~-  273 (416)
T 2pm9_A          212 GIKQQLSVVEWHPKN----------------STRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQ-  273 (416)
T ss_dssp             CCCCCEEEEEECSSC----------------TTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSS-
T ss_pred             ccCCceEEEEECCCC----------------CCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCC-
Confidence              6789999999963                25799999999   999999887521 234566 89999999999993 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC-CEEEEEeCCCeEEEEEECCCC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG-DILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg-~~l~s~~~D~~v~iW~~~~~~  301 (318)
                        ++.+|++++.|++|++|++....  ....+..|...|.+++|+|++ ++|++++.|+.|+||++....
T Consensus       274 --~~~~l~s~~~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~  339 (416)
T 2pm9_A          274 --DEHLLLSSGRDNTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT  339 (416)
T ss_dssp             --CSSCEEEEESSSEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred             --CCCeEEEEeCCCCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence              37899999999999999987754  344566788999999999999 899999999999999987754

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.1e-34  Score=257.68  Aligned_cols=251  Identities=16%  Similarity=0.123  Sum_probs=202.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~las~   86 (318)
                      +..+|.+.|++++|+|++++|++++.|++|+|||+...        ........+.+|...|.+++|++  +++ +|++|
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~   75 (342)
T 1yfq_A            6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ--------AKNVDLLQSLRYKHPLLCCNFID--NTDLQIYVG   75 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT--------TTEEEEEEEEECSSCEEEEEEEE--SSSEEEEEE
T ss_pred             cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCC--------CccccceeeeecCCceEEEEECC--CCCcEEEEE
Confidence            45689999999999999999999999999999999732        11223556668999999999974  488 99999


Q ss_pred             ECCCeEEEEeC-CCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec---------CCCCcceee
Q psy2762          87 SYDRKVIIWRG-DNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS---------DTNSWESRK  154 (318)
Q Consensus        87 s~Dg~v~vWd~-~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~---------~~~~~~~~~  154 (318)
                      +.||.|++||+ .++..   ..+.+  |...|.+++|+|   +.++++++.|+.|++|++..         ..   ....
T Consensus        76 ~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~  146 (342)
T 1yfq_A           76 TVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL---NSNN  146 (342)
T ss_dssp             ETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEES---CSSS
T ss_pred             cCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCC---eeeE
Confidence            99999999999 87653   45677  999999999999   35789999999999999754         21   1112


Q ss_pred             ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEcc-CC
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAP-SW  232 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp-~~  232 (318)
                      + .|...+.+++|+|+                   .|++++.|+.|++||+.. ...........|...|++++|+| + 
T Consensus       147 ~-~~~~~v~~~~~~~~-------------------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-  205 (342)
T 1yfq_A          147 T-KVKNKIFTMDTNSS-------------------RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE-  205 (342)
T ss_dssp             S-SSCCCEEEEEECSS-------------------EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG-
T ss_pred             E-eeCCceEEEEecCC-------------------cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC-
Confidence            2 37788999999985                   399999999999999887 43222233457888999999999 7 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCC--c--ceeeEEeeecCC---------cEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDY--V--TWTPFIMNTFDD---------VVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~--~--~~~~~~~~~~~~---------~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                         +.+|++++.|+.|++|+....  .  ......+..|..         .|.+++|+|+|++|++++.||.|++||+..
T Consensus       206 ---~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~  282 (342)
T 1yfq_A          206 ---QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT  282 (342)
T ss_dssp             ---GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred             ---CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence               789999999999999998765  0  012234445543         899999999999999999999999999876


Q ss_pred             CC
Q psy2762         300 DG  301 (318)
Q Consensus       300 ~~  301 (318)
                      +.
T Consensus       283 ~~  284 (342)
T 1yfq_A          283 RK  284 (342)
T ss_dssp             TE
T ss_pred             Hh
Confidence            53

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=4e-35  Score=266.01  Aligned_cols=256  Identities=17%  Similarity=0.268  Sum_probs=205.3

Q ss_pred             ecCCCcceeeeeeecCC----C---CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-----ccCeEEEEec
Q psy2762           8 VDTGHEDMIHDAEMDYL----G---LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-----SGPVWQVAWA   75 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~----g---~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~v~~~   75 (318)
                      ...+|...|++++|+|+    |   ++|++++.|++|++||+.....      .....+..+..|     ...|++++|+
T Consensus        57 ~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~  130 (397)
T 1sq9_A           57 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE------TKKVIFEKLDLLDSDMKKHSFWALKWG  130 (397)
T ss_dssp             EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT------TCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred             EEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc------cccccceeecccccccCCCcEEEEEEe
Confidence            34589999999999999    9   9999999999999999863200      011226788888     6999999997


Q ss_pred             CC--CCCcE-EEEEECCCeEEEEeCCC------CcEEE-----EEEe-----cCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          76 HP--QFGTL-LASCSYDRKVIIWRGDN------GNWFK-----YYEY-----NNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        76 ~~--~~~~~-las~s~Dg~v~vWd~~~------~~~~~-----~~~~-----~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      +.  .++.+ |++++.|+.|++||+..      +....     .+..     ..|...|.+++|+|+  + ++++++.|+
T Consensus       131 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg  207 (397)
T 1sq9_A          131 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNG  207 (397)
T ss_dssp             CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTS
T ss_pred             eccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCC
Confidence            21  24888 99999999999999876      43222     2222     458889999999998  6 899999999


Q ss_pred             eEEEEEeecCCCCcceeeecc---c---ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccC
Q psy2762         137 TISFLTYMSDTNSWESRKIAA---H---TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEG  207 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~  207 (318)
                      .|++||+....   ....+..   |   ..++.+++|+|+                 +.+|++++.|   +.|++||+.+
T Consensus       208 ~i~i~d~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~-----------------~~~l~~~~~d~~~g~i~i~d~~~  267 (397)
T 1sq9_A          208 TVQISELSTLR---PLYNFESQHSMINNSNSIRSVKFSPQ-----------------GSLLAIAHDSNSFGCITLYETEF  267 (397)
T ss_dssp             EEEEEETTTTE---EEEEEECCC---CCCCCEEEEEECSS-----------------TTEEEEEEEETTEEEEEEEETTT
T ss_pred             cEEEEECCCCc---eeEEEeccccccccCCccceEEECCC-----------------CCEEEEEecCCCCceEEEEECCC
Confidence            99999975432   3445556   8   889999999996                 4789999999   9999999987


Q ss_pred             CeEEEEEEccc-------------CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------ec-
Q psy2762         208 DKWIEETKLEN-------------HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------TF-  267 (318)
Q Consensus       208 ~~~~~~~~~~~-------------h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------~~-  267 (318)
                      ++.  ...+.+             |...|.+++|+|+    +.+|++++.|+.|+||++....  ....+.      .| 
T Consensus       268 ~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~  339 (397)
T 1sq9_A          268 GER--IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS----GETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIE  339 (397)
T ss_dssp             CCE--EEEECBC--------CCBSBSSCEEEEEECSS----SSEEEEEETTSEEEEEETTTTE--EEEEEECCGGGCSSG
T ss_pred             Ccc--cceeccCcccccccccccccCCcEEEEEECCC----CCEEEEEeCCCeEEEEEcCCCc--eeEEEecccCcccch
Confidence            754  345667             9999999999996    7899999999999999998754  233444      56 


Q ss_pred             --------------CCcEEEEEEcCCC----------CEEEEEeCCCeEEEEEECCC
Q psy2762         268 --------------DDVVWNVSWSLTG----------DILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       268 --------------~~~v~~v~~spdg----------~~l~s~~~D~~v~iW~~~~~  300 (318)
                                    ...|.+++|+|+|          ++|++++.||.|+||+++.+
T Consensus       340 ~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          340 EDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             GGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             hhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence                          8899999999999          79999999999999998764

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.4e-34  Score=295.45  Aligned_cols=250  Identities=22%  Similarity=0.365  Sum_probs=211.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|++++|+|+|++|++|+.||+|+|||+.           ++..+.++.+|.+.|.+++|++  ++++||+++
T Consensus       610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~-----------~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~  676 (1249)
T 3sfz_A          610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE-----------TGEKLLDIKAHEDEVLCCAFSS--DDSYIATCS  676 (1249)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEEEECCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECC-----------CCCEEEEeccCCCCEEEEEEec--CCCEEEEEe
Confidence            457999999999999999999999999999999996           3567889999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|+|||+.+++.  ...+.+|...|.+++|+|+....++++|+.|+.|++||+..+.   ....+.+|..+|.+++|
T Consensus       677 ~d~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~  751 (1249)
T 3sfz_A          677 ADKKVKIWDSATGKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRF  751 (1249)
T ss_dssp             TTSEEEEEETTTCCE--EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEEE
T ss_pred             CCCeEEEEECCCCce--EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEEE
Confidence            999999999998874  4456789999999999997657799999999999999975443   34556689999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE---------------------------------
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET---------------------------------  214 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~---------------------------------  214 (318)
                      +|+                 +.+|++++.|++|++||+.+++.....                                 
T Consensus       752 sp~-----------------~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~  814 (1249)
T 3sfz_A          752 SPD-----------------DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII  814 (1249)
T ss_dssp             CSS-----------------TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred             ecC-----------------CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence            997                 356777777888888876654321111                                 


Q ss_pred             --------------------EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE
Q psy2762         215 --------------------KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV  274 (318)
Q Consensus       215 --------------------~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v  274 (318)
                                          ...+|...|.+++|+|+    +.++++++.|+.|++|+.....  ....+.+|...|.++
T Consensus       815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~----~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~h~~~v~~v  888 (1249)
T 3sfz_A          815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY----DHLAVIALSQYCVELWNIDSRL--KVADCRGHLSWVHGV  888 (1249)
T ss_dssp             EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS----TTEEEEECSSSCEEEEETTTTE--EEEEECCCSSCEEEE
T ss_pred             EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCc--eeeecCCCccceEEE
Confidence                                11378889999999996    8899999999999999998753  345567889999999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         275 SWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       275 ~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +|+|+|++|++++.|++|++|+..
T Consensus       889 ~~spdg~~l~s~s~dg~v~vw~~~  912 (1249)
T 3sfz_A          889 MFSPDGSSFLTASDDQTIRVWETK  912 (1249)
T ss_dssp             EECTTSSEEEEEETTSCEEEEEHH
T ss_pred             EECCCCCEEEEEeCCCeEEEEEcc
Confidence            999999999999999999999964

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1e-33  Score=262.57  Aligned_cols=248  Identities=22%  Similarity=0.337  Sum_probs=200.1

Q ss_pred             ecCCCccee-eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v-~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      ...||.+.| .++.+  ++++|++|+.||+|++||+.           .++.+.++.+|.+.|++++|++  ++ +|++|
T Consensus       116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~-----------~~~~~~~~~~h~~~V~~l~~~~--~~-~l~s~  179 (464)
T 3v7d_B          116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSI-----------NKKFLLQLSGHDGGVWALKYAH--GG-ILVSG  179 (464)
T ss_dssp             EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEECS--TT-EEEEE
T ss_pred             EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECC-----------CCcEEEEEeCCCcCEEEEEEcC--CC-EEEEE
Confidence            456898886 55555  67899999999999999986           3578899999999999999963  23 99999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc---------------
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE---------------  151 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~---------------  151 (318)
                      +.||+|++||+.+++  ....+.+|...|.+++|+|...+.++++++.|++|++|++........               
T Consensus       180 s~dg~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~  257 (464)
T 3v7d_B          180 STDRTVRVWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE  257 (464)
T ss_dssp             ETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred             eCCCCEEEEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence            999999999999876  444677899999999999754478999999999999999865432110               


Q ss_pred             -----eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762         152 -----SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV  226 (318)
Q Consensus       152 -----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v  226 (318)
                           ...+.+|...+..+...                   +.+|++|+.|+.|++||+.+++.  ...+.+|...|.++
T Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~-------------------~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~  316 (464)
T 3v7d_B          258 ENPYFVGVLRGHMASVRTVSGH-------------------GNIVVSGSYDNTLIVWDVAQMKC--LYILSGHTDRIYST  316 (464)
T ss_dssp             GCTTEEEEECCCSSCEEEEEEE-------------------TTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE
T ss_pred             CCeEEEEEccCccceEEEEcCC-------------------CCEEEEEeCCCeEEEEECCCCcE--EEEecCCCCCEEEE
Confidence                 11223454444444322                   46899999999999999988764  45678999999999


Q ss_pred             EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +|+|+    +.+|++++.|++|++||+.+..  ....+..|...|.+++|+  +++|++++.||+|++||.+....
T Consensus       317 ~~~~~----~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~  384 (464)
T 3v7d_B          317 IYDHE----RKRCISASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR  384 (464)
T ss_dssp             EEETT----TTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred             EEcCC----CCEEEEEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence            99996    7899999999999999997754  344566789999999997  57999999999999999877543

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-34  Score=261.06  Aligned_cols=245  Identities=15%  Similarity=0.216  Sum_probs=203.5

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +|.+.|++++|+|++++|++|+.|+.|+|||..            +..+..+.+|...|.+++|++  ++++|++++.|+
T Consensus       106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~------------~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~  171 (425)
T 1r5m_A          106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT------------GALLNVLNFHRAPIVSVKWNK--DGTHIISMDVEN  171 (425)
T ss_dssp             --CBCEEEEEECTTSSEEEEEETTSCEEEEETT------------SCEEEEECCCCSCEEEEEECT--TSSEEEEEETTC
T ss_pred             CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC------------CCeeeeccCCCccEEEEEECC--CCCEEEEEecCC
Confidence            478899999999999999999999999999943            457788999999999999964  589999999999


Q ss_pred             eEEEEeCCCCcEEEE------------------------------------------------------EEecCCCcCeE
Q psy2762          91 KVIIWRGDNGNWFKY------------------------------------------------------YEYNNHDSSVN  116 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~------------------------------------------------------~~~~~h~~~v~  116 (318)
                      .|++||+.+++....                                                      ..+..|...|.
T Consensus       172 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~  251 (425)
T 1r5m_A          172 VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS  251 (425)
T ss_dssp             CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred             eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence            999999876543221                                                      12346788999


Q ss_pred             EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC
Q psy2762         117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC  196 (318)
Q Consensus       117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~  196 (318)
                      +++|+|+  +.++++++.|+.|++|++....   ....+..|...+..+.|+|+                 + +|++++.
T Consensus       252 ~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~-----------------~-~l~~~~~  308 (425)
T 1r5m_A          252 VLEFNDT--NKLLLSASDDGTLRIWHGGNGN---SQNCFYGHSQSIVSASWVGD-----------------D-KVISCSM  308 (425)
T ss_dssp             EEEEETT--TTEEEEEETTSCEEEECSSSBS---CSEEECCCSSCEEEEEEETT-----------------T-EEEEEET
T ss_pred             EEEECCC--CCEEEEEcCCCEEEEEECCCCc---cceEecCCCccEEEEEECCC-----------------C-EEEEEeC
Confidence            9999998  6689999999999999975433   23445678889999999996                 4 7999999


Q ss_pred             CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc------------------
Q psy2762         197 DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------------  258 (318)
Q Consensus       197 d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~------------------  258 (318)
                      |+.|++||+.+++.  ...+..|...|.+++|+|+    +.+|++++.|+.|++|++.....                  
T Consensus       309 d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (425)
T 1r5m_A          309 DGSVRLWSLKQNTL--LALSIVDGVPIFAGRISQD----GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI  382 (425)
T ss_dssp             TSEEEEEETTTTEE--EEEEECTTCCEEEEEECTT----SSEEEEEETTSCEEEEECHHHHC--------------CEEC
T ss_pred             CCcEEEEECCCCcE--eEecccCCccEEEEEEcCC----CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccc
Confidence            99999999988764  4556789999999999996    78999999999999999875320                  


Q ss_pred             eeeEEeeecCC--cEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         259 WTPFIMNTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       259 ~~~~~~~~~~~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      .....+..|..  .|.+++|+|+|++|++++.||.|+||++.
T Consensus       383 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          383 PLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             CEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             hhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            02334456655  99999999999999999999999999864

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.5e-34  Score=253.91  Aligned_cols=218  Identities=22%  Similarity=0.324  Sum_probs=181.1

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACG  132 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg  132 (318)
                      ..+..++++|.+.|++++|++ ..+++|+||+.|++|++|++....   ..+...+.+|...|.+++|+|+  +.++++|
T Consensus         7 ~~l~~~l~gH~~~V~~l~~~~-~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~   83 (319)
T 3frx_A            7 LVLRGTLEGHNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSA   83 (319)
T ss_dssp             EEEEEEECCCSSCEEEEEECS-SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEE
T ss_pred             EEEEEEEccccceEEEEEccC-CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEE
Confidence            345678999999999999974 346899999999999999975422   1245567899999999999998  7799999


Q ss_pred             ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762         133 SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       133 s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~  212 (318)
                      +.|++|++||+..+.   ....+.+|..+|.+++|+|+                 +.+|++|+.|++|+|||++..   .
T Consensus        84 s~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~-----------------~~~l~s~s~D~~i~vwd~~~~---~  140 (319)
T 3frx_A           84 SWDKTLRLWDVATGE---TYQRFVGHKSDVMSVDIDKK-----------------ASMIISGSRDKTIKVWTIKGQ---C  140 (319)
T ss_dssp             ETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTT-----------------SCEEEEEETTSCEEEEETTSC---E
T ss_pred             eCCCEEEEEECCCCC---eeEEEccCCCcEEEEEEcCC-----------------CCEEEEEeCCCeEEEEECCCC---e
Confidence            999999999975432   34566799999999999996                 468999999999999999754   3


Q ss_pred             EEEcccCCCCeeEEEEccCCC--CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         213 ETKLENHSDWVRDVAWAPSWG--LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~--~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      ...+.+|...|.++.|+|...  .++..|++++.|++|++||+....  ....+.+|...|.+++|+|+|++|++++.|+
T Consensus       141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg  218 (319)
T 3frx_A          141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFIGHNSNINTLTASPDGTLIASAGKDG  218 (319)
T ss_dssp             EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred             EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence            456789999999999999532  135589999999999999997643  2345668899999999999999999999999


Q ss_pred             eEEEEEECCCC
Q psy2762         291 SVSLWKENTDG  301 (318)
Q Consensus       291 ~v~iW~~~~~~  301 (318)
                      +|+|||+..+.
T Consensus       219 ~i~iwd~~~~~  229 (319)
T 3frx_A          219 EIMLWNLAAKK  229 (319)
T ss_dssp             EEEEEETTTTE
T ss_pred             eEEEEECCCCc
Confidence            99999987653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1e-34  Score=254.66  Aligned_cols=223  Identities=20%  Similarity=0.322  Sum_probs=177.1

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                      ..+.+|.+.|++++|++  +|++||+|+.|++|+|||+..........+.+|..+|.+|+|+|+..+.+|++|+.|++|+
T Consensus         3 ~~~~~h~~~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~   80 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM   80 (297)
T ss_dssp             EECCSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred             eeccCCcCceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence            46789999999999974  5999999999999999998754222445678999999999998743367899999999999


Q ss_pred             EEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         140 FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       140 i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      +||...+.. .....+.+|..+|.+++|+|+.               .+.+|++++.|++|++||+..+.......+.+|
T Consensus        81 iWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~---------------~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h  144 (297)
T 2pm7_B           81 IWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH  144 (297)
T ss_dssp             EEEBSSSCB-CCCEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC
T ss_pred             EEEcCCCce-EEEEEeecCCCceeEEEeCcCC---------------CCcEEEEEECCCcEEEEEecCCCceeeeeeecc
Confidence            999854321 1233456799999999999952               135899999999999999876532223456799


Q ss_pred             CCCeeEEEEccCCC---------CCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEEEEEcCCC---CEEEE
Q psy2762         220 SDWVRDVAWAPSWG---------LSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLTG---DILTV  285 (318)
Q Consensus       220 ~~~V~~v~~sp~~~---------~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~v~~spdg---~~l~s  285 (318)
                      ...|++++|+|+..         .++.+|++++.|++|+|||+......  ....+.+|...|.+|+|+|++   ++||+
T Consensus       145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las  224 (297)
T 2pm7_B          145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMAS  224 (297)
T ss_dssp             SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred             cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEE
Confidence            99999999999621         12468999999999999998764311  223566899999999999995   89999


Q ss_pred             EeCCCeEEEEEECCC
Q psy2762         286 SCGDNSVSLWKENTD  300 (318)
Q Consensus       286 ~~~D~~v~iW~~~~~  300 (318)
                      ++.|++|+||+.+..
T Consensus       225 ~s~D~~v~iWd~~~~  239 (297)
T 2pm7_B          225 VSQDRTCIIWTQDNE  239 (297)
T ss_dssp             EETTSCEEEEEESST
T ss_pred             EECCCcEEEEEeCCC
Confidence            999999999998764

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5.1e-34  Score=256.08  Aligned_cols=255  Identities=15%  Similarity=0.105  Sum_probs=203.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|++++|+|++++|++++.|++|++||+...         .......+..|...|.+++|++  ++++|++++
T Consensus        47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  115 (372)
T 1k8k_C           47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR---------TWKPTLVILRINRAARCVRWAP--NEKKFAVGS  115 (372)
T ss_dssp             EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT---------EEEEEEECCCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC---------eeeeeEEeecCCCceeEEEECC--CCCEEEEEe
Confidence            34589999999999999999999999999999999632         1123445578999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC---------------CCc
Q psy2762          88 YDRKVIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT---------------NSW  150 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~---------------~~~  150 (318)
                      .|+.|++||+..+..  ........|...|.+++|+|+  +.++++++.|+.|++||+....               ...
T Consensus       116 ~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  193 (372)
T 1k8k_C          116 GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN--SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE  193 (372)
T ss_dssp             TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT--SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred             CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCC--CCEEEEEcCCCCEEEEEcccccccccccccccccccchhh
Confidence            999999999877642  122223568899999999998  6789999999999999964210               011


Q ss_pred             ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEcc
Q psy2762         151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP  230 (318)
Q Consensus       151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp  230 (318)
                      ....+..|...+..+.|+|+                 +.+|++++.|+.|++||+.+++.  ...+..|...|++++|+|
T Consensus       194 ~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~  254 (372)
T 1k8k_C          194 LMFESSSSCGWVHGVCFSAN-----------------GSRVAWVSHDSTVCLADADKKMA--VATLASETLPLLAVTFIT  254 (372)
T ss_dssp             EEEECCCCSSCEEEEEECSS-----------------SSEEEEEETTTEEEEEEGGGTTE--EEEEECSSCCEEEEEEEE
T ss_pred             heEecCCCCCeEEEEEECCC-----------------CCEEEEEeCCCEEEEEECCCCce--eEEEccCCCCeEEEEEec
Confidence            23445578889999999996                 46899999999999999987764  455678999999999999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCC--Cc-----------------------------ceee-------EEe-eecCCcE
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSND--YV-----------------------------TWTP-------FIM-NTFDDVV  271 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~--~~-----------------------------~~~~-------~~~-~~~~~~v  271 (318)
                      +    +.+|+++ .|+.|++|++..  ..                             ....       ..+ .+|...|
T Consensus       255 ~----~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v  329 (372)
T 1k8k_C          255 E----SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV  329 (372)
T ss_dssp             T----TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE
T ss_pred             C----CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCc
Confidence            6    6777766 999999999876  21                             0000       112 3788999


Q ss_pred             EEEEEc-CCC---CEEEEEeCCCeEEEEEECC
Q psy2762         272 WNVSWS-LTG---DILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       272 ~~v~~s-pdg---~~l~s~~~D~~v~iW~~~~  299 (318)
                      .+++|+ ++|   ++|+|++.||+|++|+++.
T Consensus       330 ~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~  361 (372)
T 1k8k_C          330 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  361 (372)
T ss_dssp             EEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             ceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence            999976 677   9999999999999999765

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-33  Score=246.92  Aligned_cols=247  Identities=18%  Similarity=0.174  Sum_probs=203.0

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .....||.+.|++++| |++++|++|+.||+|+|||+.           .+.....+..|.+.|.+++|++  ++.+|++
T Consensus        11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~-----------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~   76 (313)
T 3odt_A           11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD-----------DQWLGTVVYTGQGFLNSVCYDS--EKELLLF   76 (313)
T ss_dssp             EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES-----------SSEEEEEEEECSSCEEEEEEET--TTTEEEE
T ss_pred             HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC-----------CCEEEEEeecCCccEEEEEECC--CCCEEEE
Confidence            3456899999999999 999999999999999999996           3466788889999999999974  5899999


Q ss_pred             EECCCeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          86 CSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      ++.|+.|++|++.... ......+.+|...|.+++|.    +.++++++.|+.|++|+.  .   .....+..|..++..
T Consensus        77 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~d~~i~~~d~--~---~~~~~~~~~~~~v~~  147 (313)
T 3odt_A           77 GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ----DGVVISGSWDKTAKVWKE--G---SLVYNLQAHNASVWD  147 (313)
T ss_dssp             EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEET--T---EEEEEEECCSSCEEE
T ss_pred             ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec----CCEEEEEeCCCCEEEEcC--C---cEEEecccCCCceeE
Confidence            9999999999986542 12344567899999999995    347999999999999982  1   234456689999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +.|.|..                +.+|++++.|+.|++||..  +  ....+.. |...|.+++|+|+    +. |++++
T Consensus       148 ~~~~~~~----------------~~~l~~~~~d~~i~i~d~~--~--~~~~~~~~~~~~i~~~~~~~~----~~-~~~~~  202 (313)
T 3odt_A          148 AKVVSFS----------------ENKFLTASADKTIKLWQND--K--VIKTFSGIHNDVVRHLAVVDD----GH-FISCS  202 (313)
T ss_dssp             EEEEETT----------------TTEEEEEETTSCEEEEETT--E--EEEEECSSCSSCEEEEEEEET----TE-EEEEE
T ss_pred             EEEccCC----------------CCEEEEEECCCCEEEEecC--c--eEEEEeccCcccEEEEEEcCC----Ce-EEEcc
Confidence            9998731                4689999999999999943  2  2344555 8999999999996    55 99999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCce
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAW  303 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~  303 (318)
                      .|+.|++||+....  ....+..|...|.+++|+|+| .|++++.|+.|++||+..+...
T Consensus       203 ~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~  259 (313)
T 3odt_A          203 NDGLIKLVDMHTGD--VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLK  259 (313)
T ss_dssp             TTSEEEEEETTTCC--EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEE
T ss_pred             CCCeEEEEECCchh--hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCcee
Confidence            99999999998754  234566788999999999999 5889999999999998776433

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=7.2e-35  Score=260.62  Aligned_cols=255  Identities=15%  Similarity=0.269  Sum_probs=201.1

Q ss_pred             eecCCCcceeeeeeecCC----CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCC
Q psy2762           7 LVDTGHEDMIHDAEMDYL----GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHP   77 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~----g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~   77 (318)
                      .+..||.+.|++++|+|+    ..++++++.++.|+|||+..           +..+..+..     |...|++++|+++
T Consensus        12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~   80 (366)
T 3k26_A           12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-----------QGEIRLLQSYVDADADENFYTCAWTYD   80 (366)
T ss_dssp             EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-----------GGCEEEEEEEECSCTTCCEEEEEEEEC
T ss_pred             EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-----------CcEEEeeeeccccCCCCcEEEEEeccC
Confidence            566799999999999984    45566666677999999963           223333433     6688999999753


Q ss_pred             CC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee
Q psy2762          78 QF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        78 ~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~  155 (318)
                      ..  +.+|++|+.||+|++||+.+++.  ...+.+|...|.+++|+|++ +.++++++.|+.|++||+....   ....+
T Consensus        81 ~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~  154 (366)
T 3k26_A           81 SNTSHPLLAVAGSRGIIRIINPITMQC--IKHYVGHGNAINELKFHPRD-PNLLLSVSKDHALRLWNIQTDT---LVAIF  154 (366)
T ss_dssp             TTTCCEEEEEEETTCEEEEECTTTCCE--EEEEESCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTTTE---EEEEE
T ss_pred             CCCCCCEEEEecCCCEEEEEEchhceE--eeeecCCCCcEEEEEECCCC-CCEEEEEeCCCeEEEEEeecCe---EEEEe
Confidence            22  57999999999999999988764  34566899999999999932 6789999999999999975432   22333


Q ss_pred             ---cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---------------------
Q psy2762         156 ---AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---------------------  211 (318)
Q Consensus       156 ---~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---------------------  211 (318)
                         ..|...+.+++|+|+                 +.+|++++.|+.|++||+.+++..                     
T Consensus       155 ~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (366)
T 3k26_A          155 GGVEGHRDEVLSADYDLL-----------------GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQ  217 (366)
T ss_dssp             CSTTSCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCE
T ss_pred             cccccccCceeEEEECCC-----------------CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccce
Confidence               579999999999996                 468999999999999998764321                     


Q ss_pred             -----EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc------------eeeEEeeecCCcEEEE
Q psy2762         212 -----EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT------------WTPFIMNTFDDVVWNV  274 (318)
Q Consensus       212 -----~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~------------~~~~~~~~~~~~v~~v  274 (318)
                           ......+|...|.+++|++      .+|++++.|+.|++|++.....            .....+..|...|..+
T Consensus       218 ~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  291 (366)
T 3k26_A          218 KIHFPDFSTRDIHRNYVDCVRWLG------DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM  291 (366)
T ss_dssp             EECCCSEEECSSCSSCCCEEEEET------TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred             eeccCccccccCCcceEEEEEEcC------CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence                 0122344999999999983      4899999999999999876532            1233455678889999


Q ss_pred             EEcCC--CCEEEEEeCCCeEEEEEECCCC
Q psy2762         275 SWSLT--GDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       275 ~~spd--g~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +|+|+  |++|++++.||.|++|++..+.
T Consensus       292 ~~s~~~~~~~l~~~~~dg~i~vwd~~~~~  320 (366)
T 3k26_A          292 RFSMDFWQKMLALGNQVGKLYVWDLEVED  320 (366)
T ss_dssp             CCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred             EEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence            99999  9999999999999999988754

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2e-34  Score=260.84  Aligned_cols=245  Identities=15%  Similarity=0.172  Sum_probs=188.8

Q ss_pred             CCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec---ccccCeEEEEecCCCCCcEEEE
Q psy2762          10 TGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        10 ~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+|...|.+++|+| ++++|++++.|++|++||+..            ..+..+.   +|...|.+++|++  ++.+|++
T Consensus       115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~  180 (383)
T 3ei3_B          115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------------SVIQVFAKTDSWDYWYCCVDVSV--SRQMLAT  180 (383)
T ss_dssp             CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS------------CEEEEEECCCCSSCCEEEEEEET--TTTEEEE
T ss_pred             CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC------------CceEEEeccCCCCCCeEEEEECC--CCCEEEE
Confidence            47999999999999 789999999999999999962            2344444   4558899999974  5899999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCc-EEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGL-ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      ++.|+.|++||+. +.  ....+.+|...|.+++|+|+  +. ++++++.|+.|++||+.............+|...+.+
T Consensus       181 ~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~  255 (383)
T 3ei3_B          181 GDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHAEFNPR--CDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNA  255 (383)
T ss_dssp             EETTSEEEEEETT-SC--EEEEEECSSSCEEEEEECSS--CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred             ECCCCCEEEEECC-CC--EEEEeccCCCcEEEEEECCC--CCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence            9999999999995 33  34456789999999999998  45 8999999999999998764322223333479999999


Q ss_pred             eeeCC-CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE-----cccCCCCee----------EEEE
Q psy2762         165 VSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK-----LENHSDWVR----------DVAW  228 (318)
Q Consensus       165 ~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~-----~~~h~~~V~----------~v~~  228 (318)
                      ++|+| +                 +.+|++++.|+.|+|||+.+++......     ...|...+.          .+.|
T Consensus       256 ~~~s~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  318 (383)
T 3ei3_B          256 AYFNPTD-----------------STKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR  318 (383)
T ss_dssp             EEECTTT-----------------SCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred             EEEcCCC-----------------CCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence            99999 6                 4789999999999999987654221111     112333333          3555


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +|+    +.+  +++.|++|+|||+.....  ...+..  +...+..++|+|+|++|++++ |+.|+||+++.
T Consensus       319 s~d----g~~--s~s~d~~i~iwd~~~~~~--~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          319 YPD----DQL--LLNDKRTIDIYDANSGGL--VHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             BCC----TTT--CTTCCCCEEEEETTTCCE--EEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             cCC----ccc--ccCCCCeEEEEecCCCce--eeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            554    433  778999999999977542  333443  456787889999999999997 99999999764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=257.73  Aligned_cols=265  Identities=18%  Similarity=0.262  Sum_probs=195.1

Q ss_pred             ecCCCcceeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           8 VDTGHEDMIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      +..+|.+.|++++|+|+   |++|++|+.||+|+|||+...         .......+.+|.+.|++++|++  ++++|+
T Consensus        34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~---------~~~~~~~~~~h~~~v~~~~~~~--~~~~l~  102 (368)
T 3mmy_A           34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDS---------GQTIPKAQQMHTGPVLDVCWSD--DGSKVF  102 (368)
T ss_dssp             CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTT---------SCEEEEEEEECSSCEEEEEECT--TSSEEE
T ss_pred             eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCC---------CceeEEEeccccCCEEEEEECc--CCCEEE
Confidence            56799999999999999   699999999999999999731         1234478889999999999974  589999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe--eCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW--APKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                      +++.|++|++||+.+++...   +..|...|.+++|  +|+  +.++++++.|+.|++||+.....   ...+..|. .+
T Consensus       103 s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~-~~  173 (368)
T 3mmy_A          103 TASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPN--YSCVMTGSWDKTLKFWDTRSSNP---MMVLQLPE-RC  173 (368)
T ss_dssp             EEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSS--CEEEEEEETTSEEEEECSSCSSC---SEEEECSS-CE
T ss_pred             EEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCC--CCEEEEccCCCcEEEEECCCCcE---EEEEecCC-Cc
Confidence            99999999999999876433   4469999999999  665  78899999999999999855432   12222222 22


Q ss_pred             ceeeeCCCC-------CCCccccccCC---------------------CCC-CccceEEEecCCCeEEEEEccCCeE-EE
Q psy2762         163 NAVSWGPGI-------GSLSELDLKGS---------------------KLG-GVAKRLVSGGCDNLIKIWKQEGDKW-IE  212 (318)
Q Consensus       163 ~~~~~~p~~-------~~~~~~~~~~~---------------------~~~-~~~~~lasgs~d~~i~iwd~~~~~~-~~  212 (318)
                      ..+.+.+..       +.+...+....                     ... .....+++++.|+.|++|++..... ..
T Consensus       174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~  253 (368)
T 3mmy_A          174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD  253 (368)
T ss_dssp             EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred             eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence            222222210       00000000000                     000 0012399999999999999876521 12


Q ss_pred             EEEcccCCC------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762         213 ETKLENHSD------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       213 ~~~~~~h~~------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg  280 (318)
                      ...+.+|..            .|++++|+|+    +.+|++++.|+.|+|||+....  ....+..|..+|.+++|+|||
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~g  327 (368)
T 3mmy_A          254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV----HGTLATVGSDGRFSFWDKDART--KLKTSEQLDQPISACCFNHNG  327 (368)
T ss_dssp             SEEEECSEEC----CCCEEECCEEEEEECTT----TCCEEEEETTSCEEEEETTTTE--EEEECCCCSSCEEEEEECTTS
T ss_pred             ceeeeeeecccccccccccccceEEEEEecC----CCEEEEEccCCeEEEEECCCCc--EEEEecCCCCCceEEEECCCC
Confidence            344556655            7999999996    7899999999999999998753  244566788999999999999


Q ss_pred             CEEEEEeCCCeEEEEEEC
Q psy2762         281 DILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~  298 (318)
                      ++|++++.|+..+.|+..
T Consensus       328 ~~l~~~s~d~~~~~~~~~  345 (368)
T 3mmy_A          328 NIFAYASSYDWSKGHEFY  345 (368)
T ss_dssp             SCEEEEECCCSTTCGGGC
T ss_pred             CeEEEEeccccccccccc
Confidence            999999998866665543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.3e-33  Score=260.21  Aligned_cols=246  Identities=20%  Similarity=0.281  Sum_probs=205.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|.+++|+|++ +|++|+.||+|+|||+.           ++..+..+.+|.+.|.+++|.+..++.+|++|+
T Consensus       157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s  224 (464)
T 3v7d_B          157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK-----------KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS  224 (464)
T ss_dssp             EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE
T ss_pred             EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC-----------CCcEEEEECCCCCccEEEEEecCCCCCEEEEEc
Confidence            346899999999999988 99999999999999996           356788999999999999997534679999999


Q ss_pred             CCCeEEEEeCCCCcEE---------------------EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC
Q psy2762          88 YDRKVIIWRGDNGNWF---------------------KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD  146 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~---------------------~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~  146 (318)
                      .|++|++||+.+....                     ....+.+|...|.++.  ++  +.++++++.|+.|++||+...
T Consensus       225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~~l~~~~~d~~i~vwd~~~~  300 (464)
T 3v7d_B          225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GH--GNIVVSGSYDNTLIVWDVAQM  300 (464)
T ss_dssp             TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EE--TTEEEEEETTSCEEEEETTTT
T ss_pred             CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CC--CCEEEEEeCCCeEEEEECCCC
Confidence            9999999998765421                     1335678888998885  44  558999999999999997533


Q ss_pred             CCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762         147 TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV  226 (318)
Q Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v  226 (318)
                      .   ....+.+|..++.++.|+|+                 +.+|++|+.|++|++||+.+++.  ...+.+|...|.++
T Consensus       301 ~---~~~~~~~~~~~v~~~~~~~~-----------------~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~  358 (464)
T 3v7d_B          301 K---CLYILSGHTDRIYSTIYDHE-----------------RKRCISASMDTTIRIWDLENGEL--MYTLQGHTALVGLL  358 (464)
T ss_dssp             E---EEEEECCCSSCEEEEEEETT-----------------TTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE
T ss_pred             c---EEEEecCCCCCEEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCcE--EEEEeCCCCcEEEE
Confidence            2   34556689999999999996                 46899999999999999988864  45678999999999


Q ss_pred             EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      .|++      .+|++++.|++|++||+.+...   .....+...+..++|+|++++|++++ |+.|+|||+..+.
T Consensus       359 ~~~~------~~l~s~s~dg~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~  423 (464)
T 3v7d_B          359 RLSD------KFLVSAAADGSIRGWDANDYSR---KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK  423 (464)
T ss_dssp             EECS------SEEEEEETTSEEEEEETTTCCE---EEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred             EEcC------CEEEEEeCCCcEEEEECCCCce---eeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence            9975      4899999999999999987541   22234566788899999999999988 8999999987764

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=3.3e-34  Score=262.07  Aligned_cols=251  Identities=19%  Similarity=0.280  Sum_probs=198.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|++++|+|++++|++|+.|++|+|||+..           ++.+..+.+|.+.|++++|++  ++.+|++++
T Consensus       134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~  200 (420)
T 3vl1_A          134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-----------GSNPRTLIGHRATVTDIAIID--RGRNVLSAS  200 (420)
T ss_dssp             ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------CCCCEEEECCSSCEEEEEEET--TTTEEEEEE
T ss_pred             ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-----------CcCceEEcCCCCcEEEEEEcC--CCCEEEEEc
Confidence            4569999999999999999999999999999999963           345678899999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEec-CCCcCeEEEE---------------------eeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYN-NHDSSVNSIA---------------------WAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~-~h~~~v~~v~---------------------~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      .|++|++||+.+++....+... .|...|.+++                     |+|+  +.++++++.|+.|++||+..
T Consensus       201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i~d~~~  278 (420)
T 3vl1_A          201 LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY--GKYVIAGHVSGVITVHNVFS  278 (420)
T ss_dssp             TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT--TEEEEEEETTSCEEEEETTT
T ss_pred             CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC--CCEEEEEcCCCeEEEEECCC
Confidence            9999999999887654433221 2444555555                     4666  67999999999999999854


Q ss_pred             CCCCcceeee-cccccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccCCeEEEEEEccc-CCCC
Q psy2762         146 DTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDW  222 (318)
Q Consensus       146 ~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~  222 (318)
                      ..   ....+ ..|...+.+++|+|+                 +. +|++|+.|+.|++||+.+++. ....+.+ |...
T Consensus       279 ~~---~~~~~~~~~~~~v~~~~~~~~-----------------~~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~~~~  337 (420)
T 3vl1_A          279 KE---QTIQLPSKFTCSCNSLTVDGN-----------------NANYIYAGYENGMLAQWDLRSPEC-PVGEFLINEGTP  337 (420)
T ss_dssp             CC---EEEEECCTTSSCEEEEEECSS-----------------CTTEEEEEETTSEEEEEETTCTTS-CSEEEEESTTSC
T ss_pred             Cc---eeEEcccccCCCceeEEEeCC-----------------CCCEEEEEeCCCeEEEEEcCCCcC-chhhhhccCCCC
Confidence            43   22233 368889999999997                 34 899999999999999987642 1233444 7778


Q ss_pred             eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc-------eeeEEeeecCCcEEEEEEcCCCC---EEEEEeCCCeE
Q psy2762         223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT-------WTPFIMNTFDDVVWNVSWSLTGD---ILTVSCGDNSV  292 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~-------~~~~~~~~~~~~v~~v~~spdg~---~l~s~~~D~~v  292 (318)
                      |.++.|.+     +.+|++++.|++|++|++.....       ..+..+..+...|.+++|+|+++   .|++++.+|.+
T Consensus       338 v~~~~~~~-----~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~  412 (420)
T 3vl1_A          338 INNVYFAA-----GALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFC  412 (420)
T ss_dssp             EEEEEEET-----TEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEE
T ss_pred             ceEEEeCC-----CCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceE
Confidence            88886654     67999999999999999876321       11234556778899999999999   77788889999


Q ss_pred             EEEEECC
Q psy2762         293 SLWKENT  299 (318)
Q Consensus       293 ~iW~~~~  299 (318)
                      ++|+++.
T Consensus       413 ~~~~~~~  419 (420)
T 3vl1_A          413 ALYNLSN  419 (420)
T ss_dssp             EEEESCC
T ss_pred             EEEeccC
Confidence            9998653

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6e-35  Score=263.44  Aligned_cols=255  Identities=16%  Similarity=0.157  Sum_probs=190.6

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|++++|+|++++|++|+.|++|+|||+...        ........+.+|.+.|++++|++  ++++|++++
T Consensus        50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  119 (377)
T 3dwl_C           50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD--------GTWKQTLVLLRLNRAATFVRWSP--NEDKFAVGS  119 (377)
T ss_dssp             CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--------------CCCCEEECCCCSSCEEEEECCT--TSSCCEEEE
T ss_pred             EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC--------CceeeeeEecccCCceEEEEECC--CCCEEEEEe
Confidence            45689999999999999999999999999999999732        01124677889999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcE-EEEEEecC-CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC--------------Cc-
Q psy2762          88 YDRKVIIWRGDNGNW-FKYYEYNN-HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN--------------SW-  150 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~-~~~~~~~~-h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~--------------~~-  150 (318)
                      .|++|++||+..+.. .....+.+ |...|.+++|+|+  +.++++++.|+.|++||+.....              .. 
T Consensus       120 ~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  197 (377)
T 3dwl_C          120 GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN--NVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT  197 (377)
T ss_dssp             SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT--SSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred             cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC--CCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhh
Confidence            999999999987641 11334556 9999999999998  67999999999999999842210              01 


Q ss_pred             ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEE
Q psy2762         151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAW  228 (318)
Q Consensus       151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~  228 (318)
                      ....+ +|...+.+++|+|+                 +.+|++++.|++|+|||+.+++.  .....+.+|...|.+++|
T Consensus       198 ~~~~~-~~~~~v~~~~~sp~-----------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~  259 (377)
T 3dwl_C          198 VCAEY-PSGGWVHAVGFSPS-----------------GNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLW  259 (377)
T ss_dssp             EEECC-CCSSSEEEEEECTT-----------------SSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEE
T ss_pred             hhhcc-cCCceEEEEEECCC-----------------CCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEE
Confidence            11223 78889999999997                 46899999999999999987653  124567899999999999


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCCCc-------c------------------e-ee--------E------------
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSNDYV-------T------------------W-TP--------F------------  262 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------~------------------~-~~--------~------------  262 (318)
                      +|+    +.+|++++.|+.+ +|+.....       .                  . ..        .            
T Consensus       260 s~~----~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  334 (377)
T 3dwl_C          260 ANE----SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ  334 (377)
T ss_dssp             EET----TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----------------------
T ss_pred             cCC----CCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccc
Confidence            996    7889998877766 66554211       0                  0 00        0            


Q ss_pred             ----EeeecCCcEEEEEEcCCC-C---EEEEEeCCCeEEEEEE
Q psy2762         263 ----IMNTFDDVVWNVSWSLTG-D---ILTVSCGDNSVSLWKE  297 (318)
Q Consensus       263 ----~~~~~~~~v~~v~~spdg-~---~l~s~~~D~~v~iW~~  297 (318)
                          ....|...|.++.+.+.+ .   .|+|+|.||.|+|||+
T Consensus       335 ~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          335 SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             --CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                011278899999977654 3   6999999999999974

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=8.3e-34  Score=253.08  Aligned_cols=258  Identities=13%  Similarity=0.185  Sum_probs=195.8

Q ss_pred             eecCCCcceeeeeeecCCCCEEE-EeeC---CCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCC-CC
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLA-TCSS---DHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQ-FG   80 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~-s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~-~~   80 (318)
                      .+..+|.+.|++++|+|++.+++ +|+.   |++|+|||+...           ... ....+|.+.|.+++|++.. ++
T Consensus        12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~   80 (357)
T 3i2n_A           12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG-----------DLKLLREIEKAKPIKCGTFGATSLQQ   80 (357)
T ss_dssp             EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS-----------SEEEEEEEEESSCEEEEECTTCCTTT
T ss_pred             hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC-----------cccceeeecccCcEEEEEEcCCCCCC
Confidence            45578999999999999996554 5655   999999999732           222 2234799999999997421 16


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe------eCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW------APKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~------~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      .+|++++.|+.|++||+.++.. ....+.+|...|.+++|      +|+  +.++++++.|+.|++||+.....  ....
T Consensus        81 ~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~~~d~~i~vwd~~~~~~--~~~~  155 (357)
T 3i2n_A           81 RYLATGDFGGNLHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTGSRDGTVKVWDPRQKDD--PVAN  155 (357)
T ss_dssp             CCEEEEETTSCEEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEEETTSCEEEECTTSCSS--CSEE
T ss_pred             ceEEEecCCCeEEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCC--ccEEEEEeCCCeEEEEeCCCCCC--ccee
Confidence            9999999999999999987651 23346789999999965      565  67899999999999999855431  2233


Q ss_pred             ecccc----cccceee----eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762         155 IAAHT----IGCNAVS----WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDV  226 (318)
Q Consensus       155 ~~~h~----~~v~~~~----~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v  226 (318)
                      +..|.    ..+.++.    |+|+                 +.+|++++.|+.|++||+++++..   ....|...|.++
T Consensus       156 ~~~~~~~~~~~v~~~~~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~v~~~  215 (357)
T 3i2n_A          156 MEPVQGENKRDCWTVAFGNAYNQE-----------------ERVVCAGYDNGDIKLFDLRNMALR---WETNIKNGVCSL  215 (357)
T ss_dssp             ECCCTTSCCCCEEEEEEECCCC-C-----------------CCEEEEEETTSEEEEEETTTTEEE---EEEECSSCEEEE
T ss_pred             ccccCCCCCCceEEEEEEeccCCC-----------------CCEEEEEccCCeEEEEECccCcee---eecCCCCceEEE
Confidence            33333    3677777    4554                 578999999999999999887642   235788899999


Q ss_pred             EEccCCCCCccEEEEEeCCCeEEEEEcCCCccee---eEEeeecCCcEEEEEEcCCCC-EEEEEeCCCeEEEEEECCCC
Q psy2762         227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWT---PFIMNTFDDVVWNVSWSLTGD-ILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~---~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +|+|.. .++.+|++++.|+.|++|++.......   ...+..|...|.+++|+|+++ +|++++.||.|++|+++.+.
T Consensus       216 ~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  293 (357)
T 3i2n_A          216 EFDRKD-ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI  293 (357)
T ss_dssp             EESCSS-SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred             EcCCCC-CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence            999921 016789999999999999987643211   112347889999999999998 89999999999999987643

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-33  Score=245.57  Aligned_cols=243  Identities=21%  Similarity=0.294  Sum_probs=200.7

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|.+++|+|++++|++++.|+.|++|++...        .....+..+.+|...|.++.|.    +++|++++
T Consensus        54 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~  121 (313)
T 3odt_A           54 VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT--------SGEDPLYTLIGHQGNVCSLSFQ----DGVVISGS  121 (313)
T ss_dssp             EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC--------TTSCC-CEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred             EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeec--------CCCCcccchhhcccCEEEEEec----CCEEEEEe
Confidence            34578999999999999999999999999999998632        2334567789999999999993    67999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~  166 (318)
                      .|++|++||  .+.  ....+..|...+.+++|.|.. +.++++++.|+.|++||.  .   .....+.. |...+..++
T Consensus       122 ~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~i~i~d~--~---~~~~~~~~~~~~~i~~~~  191 (313)
T 3odt_A          122 WDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFS-ENKFLTASADKTIKLWQN--D---KVIKTFSGIHNDVVRHLA  191 (313)
T ss_dssp             TTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETT-TTEEEEEETTSCEEEEET--T---EEEEEECSSCSSCEEEEE
T ss_pred             CCCCEEEEc--CCc--EEEecccCCCceeEEEEccCC-CCEEEEEECCCCEEEEec--C---ceEEEEeccCcccEEEEE
Confidence            999999999  333  344566899999999999832 568999999999999983  1   12334444 888999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|+                 +. |++++.|+.|++||+.+++.  ...+.+|...|++++|+|+    + .|++++.|+
T Consensus       192 ~~~~-----------------~~-~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~----~-~l~~~~~dg  246 (313)
T 3odt_A          192 VVDD-----------------GH-FISCSNDGLIKLVDMHTGDV--LRTYEGHESFVYCIKLLPN----G-DIVSCGEDR  246 (313)
T ss_dssp             EEET-----------------TE-EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTT----S-CEEEEETTS
T ss_pred             EcCC-----------------Ce-EEEccCCCeEEEEECCchhh--hhhhhcCCceEEEEEEecC----C-CEEEEecCC
Confidence            9986                 34 99999999999999988764  4566789999999999996    5 599999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .|++||+....  ....+..+...|.+++|+|+|+ |++++.|+.|++|+++.+
T Consensus       247 ~v~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~  297 (313)
T 3odt_A          247 TVRIWSKENGS--LKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS  297 (313)
T ss_dssp             EEEEECTTTCC--EEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred             EEEEEECCCCc--eeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence            99999988754  2345567788999999999998 557999999999997764

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=5.9e-35  Score=266.38  Aligned_cols=258  Identities=15%  Similarity=0.147  Sum_probs=168.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC------CCCCcEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH------PQFGTLLA   84 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~------~~~~~~la   84 (318)
                      +|...+....+++++.+|++++.|++|+|||+....      ......+..+.+|.+.|++++|++      +.++++||
T Consensus        87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~la  160 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNET------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIA  160 (393)
T ss_dssp             ----------CCEEEEEEEEEETTSCEEEEEEETTE------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEE
T ss_pred             ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCc------cceeeeecccCCCCCceEEEEEccccccccCCCCCEEE
Confidence            455555556667788899999999999999986320      001123456789999999999973      23689999


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-----------
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-----------  153 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-----------  153 (318)
                      |||.|++|+|||+.++..  ...+..|...|.+|+|+|++ ..++++++.|++|++||+..+.......           
T Consensus       161 s~s~D~tv~~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~  237 (393)
T 4gq1_A          161 SVGDDCTLIIWRLTDEGP--ILAGYPLSSPGISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL  237 (393)
T ss_dssp             EEETTSEEEEEEEETTEE--EEEEEECSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred             EEECCCeEEEEECCCCce--eeeecCCCCCcEEEEECCCC-CceEEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence            999999999999977653  33455688999999999984 3589999999999999986543211000           


Q ss_pred             -----------eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCC
Q psy2762         154 -----------KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDW  222 (318)
Q Consensus       154 -----------~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~  222 (318)
                                 ...+|...+..+.|++.                .+..|++++.|+++++||+..++.  ...+..|...
T Consensus       238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~----------------dg~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~  299 (393)
T 4gq1_A          238 TLNTLPLVNTCHSSGIASSLANVRWIGS----------------DGSGILAMCKSGAWLRWNLFANND--YNEISDSTMK  299 (393)
T ss_dssp             EEESGGGC------CCSSSCSEEEEETT----------------TTCEEEEECTTSEEEEEEC-----------------
T ss_pred             ecccccceeeeecccccccceeeeeecC----------------CCCEEEEEeCCCCEEEEECccCCC--CceEeeecCc
Confidence                       01234455556665421                156899999999999999876542  2333444444


Q ss_pred             eeEEEEccCC----------------CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         223 VRDVAWAPSW----------------GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       223 V~~v~~sp~~----------------~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      +..+.+.|+.                ..++.++++++.|++|+|||......  ...+..|..+|.+|+|+|||++||++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~a  377 (393)
T 4gq1_A          300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIA  377 (393)
T ss_dssp             ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred             cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEE
Confidence            4444333321                02456788999999999999987642  33456788899999999999999999


Q ss_pred             eCCCeEEEEEEC
Q psy2762         287 CGDNSVSLWKEN  298 (318)
Q Consensus       287 ~~D~~v~iW~~~  298 (318)
                      +.|| +.+|++.
T Consensus       378 s~~G-v~lvrL~  388 (393)
T 4gq1_A          378 TEGS-VLLTRLM  388 (393)
T ss_dssp             ESSE-EEEEEEG
T ss_pred             eCCC-eEEEEEe
Confidence            8765 6677653

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-34  Score=262.03  Aligned_cols=260  Identities=18%  Similarity=0.322  Sum_probs=205.2

Q ss_pred             CCcceeeeeeecCCCC-EEEEe----------eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCC
Q psy2762          11 GHEDMIHDAEMDYLGL-YLATC----------SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQF   79 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~-~l~s~----------s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~   79 (318)
                      .+...|.+++|+|+|+ +|++|          +.|++|+|||+....        ....+..+ .|...|++++|++  +
T Consensus        10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~--------~~~~~~~~-~~~~~v~~~~~s~--~   78 (416)
T 2pm9_A           10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAAD--------SEKPIASL-QVDSKFNDLDWSH--N   78 (416)
T ss_dssp             CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGG--------GCSCSCCC-CCSSCEEEEEECS--S
T ss_pred             hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCC--------CCcEEEEE-ecCCceEEEEECC--C
Confidence            3567899999999997 99999          899999999997321        00122223 5899999999974  5


Q ss_pred             CcEEEEEECCCeEEEEeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC------CCcc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT------NSWE  151 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~------~~~~  151 (318)
                      +.+|++++.|+.|++||+...  .......+.+|...|.+++|+|++ +.++++++.|+.|++||+....      ....
T Consensus        79 ~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  157 (416)
T 2pm9_A           79 NKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLT  157 (416)
T ss_dssp             SSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC
T ss_pred             CCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccc
Confidence            899999999999999998761  112445677899999999999973 4689999999999999986543      2112


Q ss_pred             eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC------CCCeeE
Q psy2762         152 SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH------SDWVRD  225 (318)
Q Consensus       152 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h------~~~V~~  225 (318)
                      ......|...+.+++|+|+.                +.+|++++.|+.|++||+.+++..  ..+..|      ...|++
T Consensus       158 ~~~~~~~~~~v~~~~~~~~~----------------~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~~~v~~  219 (416)
T 2pm9_A          158 PGQSMSSVDEVISLAWNQSL----------------AHVFASAGSSNFASIWDLKAKKEV--IHLSYTSPNSGIKQQLSV  219 (416)
T ss_dssp             CCCSCCSSCCCCEEEECSSC----------------TTEEEEESSSSCEEEEETTTTEEE--EEECCCCCSSCCCCCEEE
T ss_pred             cccccCCCCCeeEEEeCCCC----------------CcEEEEEcCCCCEEEEECCCCCcc--eEEeccccccccCCceEE
Confidence            22335788899999999963                358999999999999999887654  334444      788999


Q ss_pred             EEEccCCCCCccEEEEEeCCC---eEEEEEcCCCcceeeEEee-ecCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEECCC
Q psy2762         226 VAWAPSWGLSKCMIASCSQDR---KVIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSL-TGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       226 v~~sp~~~~~~~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~-~~~~~v~~v~~sp-dg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ++|+|+   +..+|++++.|+   .|++||+..... ....+. .|...|.+++|+| ++++|++++.|++|++||+..+
T Consensus       220 ~~~~~~---~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~  295 (416)
T 2pm9_A          220 VEWHPK---NSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA  295 (416)
T ss_dssp             EEECSS---CTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred             EEECCC---CCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence            999997   346899999999   999999987431 123344 6889999999999 9999999999999999998776


Q ss_pred             CceE
Q psy2762         301 GAWQ  304 (318)
Q Consensus       301 ~~~~  304 (318)
                      ....
T Consensus       296 ~~~~  299 (416)
T 2pm9_A          296 EQLS  299 (416)
T ss_dssp             CEEE
T ss_pred             ccce
Confidence            4433

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=5.1e-34  Score=260.30  Aligned_cols=260  Identities=15%  Similarity=0.189  Sum_probs=201.3

Q ss_pred             ecCCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC-cEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG-TLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~-~~las   85 (318)
                      ...+|.+.|++++|+| ++++|++|+.||+|+|||+......    ......+..+.+|.+.|++++|++  ++ .+|++
T Consensus        76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s  149 (402)
T 2aq5_A           76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV----LPLREPVITLEGHTKRVGIVAWHP--TAQNVLLS  149 (402)
T ss_dssp             CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS----SCBCSCSEEEECCSSCEEEEEECS--SBTTEEEE
T ss_pred             eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc----cccCCceEEecCCCCeEEEEEECc--CCCCEEEE
Confidence            3568999999999999 9999999999999999999732100    000134677889999999999964  35 79999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEEe--cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccc-
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYEY--NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIG-  161 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~-  161 (318)
                      ++.|++|++||+.+++..  ..+  ..|...|.+++|+|+  +.++++++.|+.|++||+....   ....+ ..|... 
T Consensus       150 ~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~  222 (402)
T 2aq5_A          150 AGCDNVILVWDVGTGAAV--LTLGPDVHPDTIYSVDWSRD--GALICTSCRDKRVRVIEPRKGT---VVAEKDRPHEGTR  222 (402)
T ss_dssp             EETTSCEEEEETTTTEEE--EEECTTTCCSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTE---EEEEEECSSCSSS
T ss_pred             EcCCCEEEEEECCCCCcc--EEEecCCCCCceEEEEECCC--CCEEEEEecCCcEEEEeCCCCc---eeeeeccCCCCCc
Confidence            999999999999987643  345  679999999999998  6789999999999999975432   23444 567765 


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEe---cCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG---GCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg---s~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      +..+.|+|+                 +.+|++|   +.|+.|++||+.+.+. ..... ..|...|.+++|+|+    +.
T Consensus       223 ~~~~~~~~~-----------------~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~----~~  280 (402)
T 2aq5_A          223 PVHAVFVSE-----------------GKILTTGFSRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPD----TN  280 (402)
T ss_dssp             CCEEEECST-----------------TEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETT----TT
T ss_pred             ceEEEEcCC-----------------CcEEEEeccCCCCceEEEEcCccccCCceEEe-ccCCCceeEEEEcCC----CC
Confidence            789999996                 4688998   8999999999876532 22222 356778999999996    66


Q ss_pred             EEE-EEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         238 MIA-SCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       238 ~l~-s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      +|+ +++.|+.|++|++...... ...+..  +..+|.+++|+|++.++++  .|+.+++|++..+ ..+++
T Consensus       281 ~l~~~g~~dg~i~i~d~~~~~~~-~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~-~~~~i  348 (402)
T 2aq5_A          281 IVYLCGKGDSSIRYFEITSEAPF-LHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER-KCEPI  348 (402)
T ss_dssp             EEEEEETTCSCEEEEEECSSTTC-EEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT-EEEEE
T ss_pred             EEEEEEcCCCeEEEEEecCCCcc-eEeecccccCCcccceEEeccccccee--cceeEEEEEcCCC-cEEEE
Confidence            675 5557999999999875421 222333  4589999999999998864  5679999998863 44443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=3.2e-34  Score=253.85  Aligned_cols=222  Identities=25%  Similarity=0.380  Sum_probs=173.7

Q ss_pred             EEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          60 AELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        60 ~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                      ..+.+|.+.|++++|++  +|++||||+.|++|+|||+.++.......+.+|...|.+|+|+|+..+.+|++|+.|++|+
T Consensus         7 ~~~~~H~~~V~~v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~   84 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDY--YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI   84 (316)
T ss_dssp             -------CCEEEEEECG--GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred             eecccccCeEEEeeEcC--CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence            34678999999999974  5999999999999999999877554566788999999999998642256899999999999


Q ss_pred             EEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEccc
Q psy2762         140 FLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLEN  218 (318)
Q Consensus       140 i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~~  218 (318)
                      +||...+.. .....+.+|...|.+++|+|+.               .+.+||+|+.|++|++||+..+ .+.....+.+
T Consensus        85 iWd~~~~~~-~~~~~~~~h~~~V~~v~~~p~~---------------~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~  148 (316)
T 3bg1_A           85 IWREENGTW-EKSHEHAGHDSSVNSVCWAPHD---------------YGLILACGSSDGAISLLTYTGEGQWEVKKINNA  148 (316)
T ss_dssp             EECCSSSCC-CEEEEECCCSSCCCEEEECCTT---------------TCSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred             EEECCCCcc-eEEEEccCCCCceEEEEECCCC---------------CCcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence            999754321 1234456899999999999962               1357999999999999998765 2333456789


Q ss_pred             CCCCeeEEEEccCCCC-------------CccEEEEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCC----
Q psy2762         219 HSDWVRDVAWAPSWGL-------------SKCMIASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTG----  280 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~-------------~~~~l~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg----  280 (318)
                      |...|.+++|+|+...             .+.+|++++.|++|+||+......+ ....+.+|.++|.+++|+|++    
T Consensus       149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~  228 (316)
T 3bg1_A          149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPT  228 (316)
T ss_dssp             SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSC
T ss_pred             ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCC
Confidence            9999999999996311             1468999999999999998654222 233456789999999999997    


Q ss_pred             CEEEEEeCCCeEEEEEECC
Q psy2762         281 DILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~~  299 (318)
                      ++||+++.|++|+||+.+.
T Consensus       229 ~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          229 STIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             CEEEEEETTCEEEEEECSS
T ss_pred             ceEEEEcCCCeEEEEEccC
Confidence            8999999999999999875

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.1e-34  Score=260.97  Aligned_cols=255  Identities=12%  Similarity=0.120  Sum_probs=191.3

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc------------cccCeEEEEecCCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG------------HSGPVWQVAWAHPQ   78 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~------------h~~~V~~v~~~~~~   78 (318)
                      +|...|++++|+|++++|++|+.|++|+|||++..        ..++.+..+.+            +...+.++.+....
T Consensus       109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  180 (437)
T 3gre_A          109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHY--------QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE  180 (437)
T ss_dssp             ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEE--------EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred             cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccc--------cCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence            69999999999999999999999999999998411        01222222222            44556666643223


Q ss_pred             CCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-c
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-A  157 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~  157 (318)
                      ++.+|++++.|++|++||+.+++.........|...|.+++|+|+  +.++++|+.|+.|++||+....   ....+. .
T Consensus       181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~  255 (437)
T 3gre_A          181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE--CCVLILGTTRGIIDIWDIRFNV---LIRSWSFG  255 (437)
T ss_dssp             SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT--SCEEEEEETTSCEEEEETTTTE---EEEEEBCT
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC--CCEEEEEcCCCeEEEEEcCCcc---EEEEEecC
Confidence            689999999999999999988875444332228899999999998  7799999999999999985432   233443 6


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE----------------------
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK----------------------  215 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~----------------------  215 (318)
                      |..+|.++.|+|...             ..+.+|++|+.|++|+|||+.+++......                      
T Consensus       256 ~~~~v~~~~~~~~~s-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  322 (437)
T 3gre_A          256 DHAPITHVEVCQFYG-------------KNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELN  322 (437)
T ss_dssp             TCEEEEEEEECTTTC-------------TTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCC
T ss_pred             CCCceEEEEeccccC-------------CCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccce
Confidence            777899998877421             115689999999999999998876433322                      


Q ss_pred             ccc--CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE---------------------Ee--------
Q psy2762         216 LEN--HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF---------------------IM--------  264 (318)
Q Consensus       216 ~~~--h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---------------------~~--------  264 (318)
                      +.+  |...|++++|++     +.+|++++.|+.|++||+.+.......                     ..        
T Consensus       323 ~~~~~~~~~v~~l~~~~-----~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (437)
T 3gre_A          323 FCGIRSLNALSTISVSN-----DKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTST  397 (437)
T ss_dssp             CCCCCSGGGGCCEEEET-----TEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----
T ss_pred             ecccccCCceEEEEECC-----ceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccc
Confidence            122  667788888884     579999999999999998875421110                     00        


Q ss_pred             ------eecCCcEEEEEEcCC--CCEEEEEeCCCeEEEEE
Q psy2762         265 ------NTFDDVVWNVSWSLT--GDILTVSCGDNSVSLWK  296 (318)
Q Consensus       265 ------~~~~~~v~~v~~spd--g~~l~s~~~D~~v~iW~  296 (318)
                            ..|.+.|.+++|+++  +.+|+||+.||.|+||+
T Consensus       398 ~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          398 HSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             ---------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                  127889999999998  88999999999999995

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.7e-33  Score=253.52  Aligned_cols=250  Identities=19%  Similarity=0.268  Sum_probs=195.1

Q ss_pred             CCCcceeeeeeecCCCC-EEEEeeCCCcEEEEEc----CCCcCCCCCCCCcceEEEEecc----------cccCeEEEEe
Q psy2762          10 TGHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNL----DRNLKKDDSHSQKGTLIAELKG----------HSGPVWQVAW   74 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~----~~~~~~~~~~~~~~~~~~~~~~----------h~~~V~~v~~   74 (318)
                      ..|.+.|++++|+|+|+ +|++|+.|++|+|||+    ......     -.......+..          |.+.|++++|
T Consensus        42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  116 (425)
T 1r5m_A           42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-----WKLTIIAELRHPFALSASSGKTTNQVTCLAW  116 (425)
T ss_dssp             EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-----EEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred             eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-----ccccccccccccccccccccCCCCceEEEEE
Confidence            34669999999999999 9999999999999999    522000     00002333333          7889999999


Q ss_pred             cCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          75 AHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        75 ~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      ++  ++++|++++.|+.|++||.. +.  ....+..|...|.+++|+|+  +.++++++.|+.|++|++....   ....
T Consensus       117 s~--~~~~l~~~~~dg~i~i~~~~-~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~---~~~~  186 (425)
T 1r5m_A          117 SH--DGNSIVTGVENGELRLWNKT-GA--LLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGT---VMQH  186 (425)
T ss_dssp             CT--TSSEEEEEETTSCEEEEETT-SC--EEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTE---EEEE
T ss_pred             cC--CCCEEEEEeCCCeEEEEeCC-CC--eeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCc---EEEE
Confidence            74  58999999999999999943 44  34456789999999999998  6789999999999999974432   2333


Q ss_pred             ecccccc---------------cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         155 IAAHTIG---------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       155 ~~~h~~~---------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      +..+...               +..+.|+|+                  ..+++++.|+.|++||+..++.  ...+.+|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~g~i~~~d~~~~~~--~~~~~~~  246 (425)
T 1r5m_A          187 FELKETGGSSINAENHSGDGSLGVDVEWVDD------------------DKFVIPGPKGAIFVYQITEKTP--TGKLIGH  246 (425)
T ss_dssp             ECCC---------------CCCBSCCEEEET------------------TEEEEECGGGCEEEEETTCSSC--SEEECCC
T ss_pred             eeccccCccceeeccccCCcceeeEEEEcCC------------------CEEEEEcCCCeEEEEEcCCCce--eeeeccC
Confidence            3444444               777777774                  4689999999999999987753  3456789


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ...|++++|+|+    +.+|++++.|+.|++|++.....  ...+..|...|.+++|+|++ +|++++.|+.|++||+..
T Consensus       247 ~~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~  319 (425)
T 1r5m_A          247 HGPISVLEFNDT----NKLLLSASDDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ  319 (425)
T ss_dssp             SSCEEEEEEETT----TTEEEEEETTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT
T ss_pred             CCceEEEEECCC----CCEEEEEcCCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC
Confidence            999999999996    77999999999999999876542  34456688899999999999 999999999999999876


Q ss_pred             CC
Q psy2762         300 DG  301 (318)
Q Consensus       300 ~~  301 (318)
                      +.
T Consensus       320 ~~  321 (425)
T 1r5m_A          320 NT  321 (425)
T ss_dssp             TE
T ss_pred             Cc
Confidence            53

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.5e-33  Score=255.77  Aligned_cols=223  Identities=22%  Similarity=0.300  Sum_probs=183.3

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ..+..++++|.+.|++++|++  ++++|+||+.|++|+|||+.+++.  ...+..|...|.+++|+|+  +.++++|+.|
T Consensus        56 ~~~~~~l~gH~~~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~--~~~~~~h~~~v~~~~~s~~--g~~las~~~d  129 (380)
T 3iz6_a           56 LVCCRTLQGHSGKVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQK--THAIKLHCPWVMECAFAPN--GQSVACGGLD  129 (380)
T ss_dssp             CEEEEEECCCSSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEE--EEEEECCCTTCCCCEECTT--SSEEEECCSS
T ss_pred             eEEeecccccccEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcc--ceEEecCCCCEEEEEECCC--CCEEEEeeCC
Confidence            467789999999999999974  589999999999999999988764  4456789999999999998  7899999999


Q ss_pred             CeEEEEEeecCCC---Cc-ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         136 GTISFLTYMSDTN---SW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       136 ~~i~i~~~~~~~~---~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      +.|++|++.....   .. ....+.+|...+..+.|.|+.                ...|++|+.|++|++||+.+++..
T Consensus       130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~----------------~~~l~s~s~D~~i~~wd~~~~~~~  193 (380)
T 3iz6_a          130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ----------------ETRLITGSGDQTCVLWDVTTGQRI  193 (380)
T ss_dssp             SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS----------------SSCEEEECTTSCEEEECTTTCCEE
T ss_pred             CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC----------------CCEEEEECCCCcEEEEEcCCCcEE
Confidence            9999999854221   11 123456899999999999863                246999999999999999887654


Q ss_pred             EEEE---cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         212 EETK---LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       212 ~~~~---~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      ....   ..+|...|.+++|+|.   ++.+|++|+.|++|++||+..... ....+.+|...|.+++|+|+|++|++++.
T Consensus       194 ~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~sgs~D~~v~~wd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~  269 (380)
T 3iz6_a          194 SIFGSEFPSGHTADVLSLSINSL---NANMFISGSCDTTVRLWDLRITSR-AVRTYHGHEGDINSVKFFPDGQRFGTGSD  269 (380)
T ss_dssp             EEECCCSSSSCCSCEEEEEECSS---SCCEEEEEETTSCEEEEETTTTCC-CCEEECCCSSCCCEEEECTTSSEEEEECS
T ss_pred             EEeecccCCCCccCeEEEEeecC---CCCEEEEEECCCeEEEEECCCCCc-ceEEECCcCCCeEEEEEecCCCeEEEEcC
Confidence            3321   1689999999999884   478999999999999999874321 23456789999999999999999999999


Q ss_pred             CCeEEEEEECCCCceE
Q psy2762         289 DNSVSLWKENTDGAWQ  304 (318)
Q Consensus       289 D~~v~iW~~~~~~~~~  304 (318)
                      |++|+|||+..+....
T Consensus       270 D~~i~lwd~~~~~~~~  285 (380)
T 3iz6_a          270 DGTCRLFDMRTGHQLQ  285 (380)
T ss_dssp             SSCEEEEETTTTEEEE
T ss_pred             CCeEEEEECCCCcEEE
Confidence            9999999988764443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.3e-33  Score=251.33  Aligned_cols=204  Identities=23%  Similarity=0.397  Sum_probs=173.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|.+++|+|++.+|++|+.|++|+|||++           .++.+.++.+|...|.++.|.+..++++|++|+
T Consensus       149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs  217 (354)
T 2pbi_B          149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE-----------SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG  217 (354)
T ss_dssp             EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred             eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC-----------CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence            345799999999999999999999999999999996           356788999999999999997544578999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV  165 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~  165 (318)
                      .|++|++||+.+++.  ...+.+|...|++++|+|+  +.++++++.|++|++||+....   ....+.  .+..++..+
T Consensus       218 ~Dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~~~p~--~~~l~s~s~D~~v~lwd~~~~~---~~~~~~~~~~~~~~~~~  290 (354)
T 2pbi_B          218 CDKKAMVWDMRSGQC--VQAFETHESDVNSVRYYPS--GDAFASGSDDATCRLYDLRADR---EVAIYSKESIIFGASSV  290 (354)
T ss_dssp             TTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCTTCCSCEEEE
T ss_pred             CCCeEEEEECCCCcE--EEEecCCCCCeEEEEEeCC--CCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCcccceeEE
Confidence            999999999998874  4456789999999999998  6789999999999999975432   122222  233467889


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD  245 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D  245 (318)
                      +|+|+                 +.+|++|+.|++|+|||+.+++.  ...+.+|...|++++|+|+    +.+|++++.|
T Consensus       291 ~~s~~-----------------g~~l~~g~~d~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spd----g~~l~sgs~D  347 (354)
T 2pbi_B          291 DFSLS-----------------GRLLFAGYNDYTINVWDVLKGSR--VSILFGHENRVSTLRVSPD----GTAFCSGSWD  347 (354)
T ss_dssp             EECTT-----------------SSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTT----SSCEEEEETT
T ss_pred             EEeCC-----------------CCEEEEEECCCcEEEEECCCCce--EEEEECCCCcEEEEEECCC----CCEEEEEcCC
Confidence            99997                 57899999999999999987754  4567899999999999996    8899999999


Q ss_pred             CeEEEEE
Q psy2762         246 RKVIIWT  252 (318)
Q Consensus       246 ~~i~vw~  252 (318)
                      ++|+||+
T Consensus       348 ~~v~vW~  354 (354)
T 2pbi_B          348 HTLRVWA  354 (354)
T ss_dssp             SEEEEEC
T ss_pred             CCEEecC
Confidence            9999995

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.9e-32  Score=247.97  Aligned_cols=245  Identities=22%  Similarity=0.369  Sum_probs=199.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-cccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .+|.+.+....+++++..+++++.|++|+|||+..           +.....+.. |.+.|++++|++  ++.+|++|+.
T Consensus        88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~-----------~~~~~~~~~~~~~~v~~v~~s~--~~~~l~~~~~  154 (401)
T 4aez_A           88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADS-----------GSVSALAETDESTYVASVKWSH--DGSFLSVGLG  154 (401)
T ss_dssp             TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTT-----------CCEEEEEECCTTCCEEEEEECT--TSSEEEEEET
T ss_pred             CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCC-----------CcEeEeeecCCCCCEEEEEECC--CCCEEEEECC
Confidence            47777766656666667788999999999999973           344555554 899999999974  5899999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      ||.|++||+.+++.  ...+.+|...|.+++|++    .++++++.|+.|++||+....  .....+.+|...+..++|+
T Consensus       155 dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~  226 (401)
T 4aez_A          155 NGLVDIYDVESQTK--LRTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWR  226 (401)
T ss_dssp             TSCEEEEETTTCCE--EEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEEC
T ss_pred             CCeEEEEECcCCeE--EEEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEc
Confidence            99999999988764  445678999999999964    479999999999999985332  2345566899999999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe--CCC
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS--QDR  246 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s--~D~  246 (318)
                      |+                 +.+|++|+.|+.|++||+.+++.  ...+.+|...|.+++|+|+   ...++++++  .|+
T Consensus       227 ~~-----------------~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~---~~~ll~~~~gs~d~  284 (401)
T 4aez_A          227 SD-----------------GLQLASGGNDNVVQIWDARSSIP--KFTKTNHNAAVKAVAWCPW---QSNLLATGGGTMDK  284 (401)
T ss_dssp             TT-----------------SSEEEEEETTSCEEEEETTCSSE--EEEECCCSSCCCEEEECTT---STTEEEEECCTTTC
T ss_pred             CC-----------------CCEEEEEeCCCeEEEccCCCCCc--cEEecCCcceEEEEEECCC---CCCEEEEecCCCCC
Confidence            96                 46899999999999999987654  4557789999999999997   356788776  899


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTD  300 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~  300 (318)
                      .|++||+.....   .....+...|.+++|+|+|++|++++  .|+.|+||++..+
T Consensus       285 ~i~i~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~  337 (401)
T 4aez_A          285 QIHFWNAATGAR---VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS  337 (401)
T ss_dssp             EEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred             EEEEEECCCCCE---EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence            999999987542   22234667899999999999999954  8999999998774

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.7e-32  Score=250.01  Aligned_cols=237  Identities=17%  Similarity=0.281  Sum_probs=199.6

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|...|+++.+  ++++|++|+.||+|+|||+.           +++.+..+.+|.+.|.+++|    ++++|++|+.|
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~l~~----~~~~l~sg~~d  192 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKN-----------TLECKRILTGHTGSVLCLQY----DERVIITGSSD  192 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESS-----------SCCEEEEECCCSSCEEEEEC----CSSEEEEEETT
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCC-----------CCeEEEEEcCCCCcEEEEEE----CCCEEEEEcCC
Confidence            467788998877  89999999999999999986           35678889999999999998    37899999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |+|++||+.+++.  ...+.+|...|.+++|++.    ++++|+.|+.|++||+...........+.+|...+..+.|. 
T Consensus       193 g~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-  265 (435)
T 1p22_A          193 STVRVWDVNTGEM--LNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-  265 (435)
T ss_dssp             SCEEEEESSSCCE--EEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-
T ss_pred             CeEEEEECCCCcE--EEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-
Confidence            9999999998874  4456789999999999853    79999999999999986554322224456899999999884 


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                                        +.+|++|+.|++|++||+.+++.  ...+.+|...|.++.|+      +.+|++++.|++|+
T Consensus       266 ------------------~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~------~~~l~~g~~dg~i~  319 (435)
T 1p22_A          266 ------------------DKYIVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQYR------DRLVVSGSSDNTIR  319 (435)
T ss_dssp             ------------------TTEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEEE------TTEEEEEETTSCEE
T ss_pred             ------------------CCEEEEEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEeC------CCEEEEEeCCCeEE
Confidence                              35899999999999999988764  45677999999999995      45899999999999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +||+....  ....+.+|...|.+++|  ++++|++++.||+|++||+..+
T Consensus       320 iwd~~~~~--~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~  366 (435)
T 1p22_A          320 LWDIECGA--CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA  366 (435)
T ss_dssp             EEETTTCC--EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH
T ss_pred             EEECCCCC--EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Confidence            99998754  24456678899999999  7899999999999999997553

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.4e-32  Score=262.63  Aligned_cols=255  Identities=17%  Similarity=0.236  Sum_probs=209.4

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~   86 (318)
                      .-..|.+.|++++|+|+|++|++++ |+.|+|||++...       .....+..+.+|.+. |++++|++-.++++||++
T Consensus        13 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~-------~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~   84 (615)
T 1pgu_A           13 QPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGD-------SKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG   84 (615)
T ss_dssp             CCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSC-------CSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred             CCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCC-------CccccceEEecCCCceEEEEEECcCCCCCEEEEe
Confidence            4567999999999999999999988 8999999986210       000457889999999 999999741148999999


Q ss_pred             ECCCeEEEEeCCCC------cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeec
Q psy2762          87 SYDRKVIIWRGDNG------NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        87 s~Dg~v~vWd~~~~------~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~  156 (318)
                      +.||+|+|||+.++      .......+..|...|.+++|+|+  +.++++++.+    +.|.+|+.  ..   ....+.
T Consensus        85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~--~~---~~~~~~  157 (615)
T 1pgu_A           85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDS--GN---SLGEVS  157 (615)
T ss_dssp             ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTT--CC---EEEECC
T ss_pred             cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEEC--CC---cceeee
Confidence            99999999999654      33455567789999999999998  6788888887    68888862  21   345667


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC---CeeEEEEccCCC
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD---WVRDVAWAPSWG  233 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~---~V~~v~~sp~~~  233 (318)
                      +|...+..++|+|+.                ...|++++.|+.|++||..+++.  ...+.+|..   .|++++|+|+  
T Consensus       158 ~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~--  217 (615)
T 1pgu_A          158 GHSQRINACHLKQSR----------------PMRSMTVGDDGSVVFYQGPPFKF--SASDRTHHKQGSFVRDVEFSPD--  217 (615)
T ss_dssp             SCSSCEEEEEECSSS----------------SCEEEEEETTTEEEEEETTTBEE--EEEECSSSCTTCCEEEEEECST--
T ss_pred             cCCccEEEEEECCCC----------------CcEEEEEeCCCcEEEEeCCCcce--eeeecccCCCCceEEEEEECCC--
Confidence            899999999999973                13799999999999999887654  456788999   9999999994  


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCcceeeEEe-e---ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYVTWTPFIM-N---TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~-~---~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                       ++.+|++++.|+.|++||+....  ....+ .   .|...|.+++|+ ++++|++++.|+.|++||...+.
T Consensus       218 -~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~  285 (615)
T 1pgu_A          218 -SGEFVITVGSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK  285 (615)
T ss_dssp             -TCCEEEEEETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred             -CCCEEEEEeCCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence             27899999999999999987654  23334 4   788999999999 99999999999999999987653

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=7.4e-33  Score=252.59  Aligned_cols=261  Identities=14%  Similarity=0.237  Sum_probs=201.4

Q ss_pred             eeeeeeecCCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      ....++++|+... +++++.||.|+||++.....       ....+..+.+|.+.|++++|++ .++.+|++|+.||+|+
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~-------~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~s~dg~v~  107 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR-------VDKNVPLVCGHTAPVLDIAWCP-HNDNVIASGSEDCTVM  107 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE-------CCTTCCCBCCCSSCEEEEEECT-TCTTEEEEEETTSEEE
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC-------CCCCCceEecCCCCEEEEEeCC-CCCCEEEEEeCCCeEE
Confidence            3445778887754 44588999999999863200       0012445789999999999974 3589999999999999


Q ss_pred             EEeCCCCcE-----EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--cccccccceee
Q psy2762          94 IWRGDNGNW-----FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGCNAVS  166 (318)
Q Consensus        94 vWd~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v~~~~  166 (318)
                      |||+.++..     .....+.+|...|.+++|+|+. ..++++++.|+.|++||+....   ....+  ..|...+.+++
T Consensus       108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~  183 (402)
T 2aq5_A          108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA-QNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVD  183 (402)
T ss_dssp             EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB-TTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEE
T ss_pred             EEEccCCCCccccCCceEEecCCCCeEEEEEECcCC-CCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEE
Confidence            999987621     1334567899999999999983 2589999999999999975432   34455  67999999999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc-ccCCCC-eeEEEEccCCCCCccEEEEE--
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL-ENHSDW-VRDVAWAPSWGLSKCMIASC--  242 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~~~~l~s~--  242 (318)
                      |+|+                 +.+|++++.|+.|+|||+++++..  ..+ .+|... +.++.|+|+    +.+|+++  
T Consensus       184 ~~~~-----------------~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~l~~g~~  240 (402)
T 2aq5_A          184 WSRD-----------------GALICTSCRDKRVRVIEPRKGTVV--AEKDRPHEGTRPVHAVFVSE----GKILTTGFS  240 (402)
T ss_dssp             ECTT-----------------SSCEEEEETTSEEEEEETTTTEEE--EEEECSSCSSSCCEEEECST----TEEEEEEEC
T ss_pred             ECCC-----------------CCEEEEEecCCcEEEEeCCCCcee--eeeccCCCCCcceEEEEcCC----CcEEEEecc
Confidence            9996                 468999999999999999887643  444 678766 899999996    7889998  


Q ss_pred             -eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCc-eEEEeeec
Q psy2762         243 -SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGA-WQCITEMG  310 (318)
Q Consensus       243 -s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~-~~~~~~~~  310 (318)
                       +.|+.|++||+.............+...|..++|+|+|++|++++ .|+.|++|++..+.. ...+..+.
T Consensus       241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~  311 (402)
T 2aq5_A          241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS  311 (402)
T ss_dssp             TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred             CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence             799999999997754211122224567899999999999997555 799999999988764 55555544

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=9.9e-33  Score=284.57  Aligned_cols=272  Identities=20%  Similarity=0.319  Sum_probs=208.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|++++|+|+|++|++|+.|++|+|||+.           +++.+.++.+|.+.|++++|+++.++.++++|+
T Consensus       652 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~  720 (1249)
T 3sfz_A          652 DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA-----------TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS  720 (1249)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE
T ss_pred             EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC-----------CCceEEEEcCCCCcEEEEEEecCCCceEEEEEe
Confidence            346899999999999999999999999999999996           356788999999999999998654577999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee--e--------ecc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR--K--------IAA  157 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~--~--------~~~  157 (318)
                      .|++|++||+.++..  ...+.+|...|.+++|+|+  +.++++++.|+.|++||+..........  .        ...
T Consensus       721 ~d~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~sp~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  796 (1249)
T 3sfz_A          721 NDFFLKLWDLNQKEC--RNTMFGHTNSVNHCRFSPD--DELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPED  796 (1249)
T ss_dssp             TTSCEEEEETTSSSE--EEEECCCSSCEEEEEECSS--TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------C
T ss_pred             CCCeEEEEECCCcch--hheecCCCCCEEEEEEecC--CCEEEEEECCCeEEEEeCCCCcccceecccccccccCCcccc
Confidence            999999999998874  4456789999999999998  6789999999999999975442100000  0        001


Q ss_pred             cccccceeeeCCCCCCCcc--------cccc----------C-------CCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762         158 HTIGCNAVSWGPGIGSLSE--------LDLK----------G-------SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~--------~~~~----------~-------~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~  212 (318)
                      +...+.+++|+|+...+..        .+..          .       ..+...+.++++++.|+.|++||..++..  
T Consensus       797 ~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~--  874 (1249)
T 3sfz_A          797 VEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK--  874 (1249)
T ss_dssp             CCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE--
T ss_pred             ccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--
Confidence            1224556667665321100        0000          0       01112257899999999999999988754  


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-----------------------------------
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-----------------------------------  257 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-----------------------------------  257 (318)
                      ...+.+|...|++++|+|+    +.+|++++.|++|++|+.....                                   
T Consensus       875 ~~~~~~h~~~v~~v~~spd----g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  950 (1249)
T 3sfz_A          875 VADCRGHLSWVHGVMFSPD----GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIA  950 (1249)
T ss_dssp             EEEECCCSSCEEEEEECTT----SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEE
T ss_pred             eeecCCCccceEEEEECCC----CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEe
Confidence            4667899999999999996    7899999999999999853200                                   


Q ss_pred             ------------------------------------------ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         258 ------------------------------------------TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       258 ------------------------------------------~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                                                                ......+..|...|.+++|+|+|++|++++.|++|++|
T Consensus       951 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A          951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030 (1249)
T ss_dssp             ESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE
T ss_pred             cCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence                                                      00011233567789999999999999999999999999


Q ss_pred             EECCC
Q psy2762         296 KENTD  300 (318)
Q Consensus       296 ~~~~~  300 (318)
                      +...+
T Consensus      1031 d~~~~ 1035 (1249)
T 3sfz_A         1031 NWQTG 1035 (1249)
T ss_dssp             ETTTT
T ss_pred             ECCCC
Confidence            97664

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6e-32  Score=250.47  Aligned_cols=271  Identities=11%  Similarity=0.056  Sum_probs=200.2

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCc---CC-----CCC---------C----------CC-----------
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNL---KK-----DDS---------H----------SQ-----------   54 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~-----~~~---------~----------~~-----------   54 (318)
                      ..++.+++|+|+|++|+++ .++.|++||+..+.   ..     ...         .          ..           
T Consensus         4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence            4578999999999977765 58899999986442   00     000         0          00           


Q ss_pred             --------cceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCC--CCcEEEEEEecCCCcCeEEEEeeCC
Q psy2762          55 --------KGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGD--NGNWFKYYEYNNHDSSVNSIAWAPK  123 (318)
Q Consensus        55 --------~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~--~~~~~~~~~~~~h~~~v~~v~~~p~  123 (318)
                              .........+|.+.|++++|++  ++++| ++++.|++|+|||+.  ++..........|...|.+++|+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~  160 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED  160 (450)
T ss_dssp             -----------------CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred             cccccCccccCCCCCCCccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence                    0000112235667899999974  47885 999999999999998  6665554443467889999999998


Q ss_pred             CCCcEEEEeecCCeEEEEEeecCCCCc-ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762         124 EFGLILACGSSDGTISFLTYMSDTNSW-ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       124 ~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                        +.+|++++.|+.|.+|++....... ....+.+|...+.+++|+|+..              .+.+|++|+.|++|+|
T Consensus       161 --~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~--------------~~~~l~s~~~d~~i~v  224 (450)
T 2vdu_B          161 --DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSD--------------GHQFIITSDRDEHIKI  224 (450)
T ss_dssp             --SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTT--------------SCEEEEEEETTSCEEE
T ss_pred             --CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCC--------------CCcEEEEEcCCCcEEE
Confidence              6789999999999999975543221 2224568999999999999610              0368999999999999


Q ss_pred             EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------------
Q psy2762         203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-----------------  265 (318)
Q Consensus       203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-----------------  265 (318)
                      ||+.+++... ..+.+|...|++++|+ +    +.+|++++.|++|+|||+......  ..+.                 
T Consensus       225 wd~~~~~~~~-~~~~~h~~~v~~~~~s-d----~~~l~s~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  296 (450)
T 2vdu_B          225 SHYPQCFIVD-KWLFGHKHFVSSICCG-K----DYLLLSAGGDDKIFAWDWKTGKNL--STFDYNSLIKPYLNDQHLAPP  296 (450)
T ss_dssp             EEESCTTCEE-EECCCCSSCEEEEEEC-S----TTEEEEEESSSEEEEEETTTCCEE--EEEECHHHHGGGCCTTSBC--
T ss_pred             EECCCCceee-eeecCCCCceEEEEEC-C----CCEEEEEeCCCeEEEEECCCCcEe--eeecchhhhhhhhhhcccccc
Confidence            9998775432 2256899999999999 6    789999999999999999875421  1121                 


Q ss_pred             --------ecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEE--CCCCceEEEeeec
Q psy2762         266 --------TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKE--NTDGAWQCITEMG  310 (318)
Q Consensus       266 --------~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~--~~~~~~~~~~~~~  310 (318)
                              .....|.+++|+|++++|++++ .|+.|+||++  ..++.+.++..+.
T Consensus       297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~  352 (450)
T 2vdu_B          297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT  352 (450)
T ss_dssp             --------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred             cccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence                    2235699999999999999999 8999999999  5666667666554

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.4e-32  Score=253.52  Aligned_cols=242  Identities=22%  Similarity=0.346  Sum_probs=197.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|.+++|  ++++|++|+.||+|+|||+.           .++.+.++.+|.+.|.+++|+    +.+|++|+
T Consensus       168 ~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~l~~~----~~~l~s~s  230 (435)
T 1p22_A          168 ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN-----------TGEMLNTLIHHCEAVLHLRFN----NGMMVTCS  230 (435)
T ss_dssp             EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-----------SCCEEEEECCCCSCEEEEECC----TTEEEEEE
T ss_pred             EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-----------CCcEEEEEcCCCCcEEEEEEc----CCEEEEee
Confidence            45689999999998  88999999999999999996           356788999999999999994    46999999


Q ss_pred             CCCeEEEEeCCCCcEE-EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          88 YDRKVIIWRGDNGNWF-KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      .|++|++||+.++... ....+.+|...|.+++|.    +.++++|+.|+.|++||.....   ....+.+|...+.++.
T Consensus       231 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~  303 (435)
T 1p22_A          231 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD----DKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQ  303 (435)
T ss_dssp             TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE----TTEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEE
T ss_pred             CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC----CCEEEEEeCCCeEEEEECCcCc---EEEEEcCCCCcEEEEE
Confidence            9999999999876532 234567899999999994    4589999999999999975443   3455668888998888


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |++                   .+|++|+.|++|++||+.+++.  ...+.+|...|.+++|.      +.+|++++.|+
T Consensus       304 ~~~-------------------~~l~~g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~------~~~l~sg~~dg  356 (435)
T 1p22_A          304 YRD-------------------RLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRFD------NKRIVSGAYDG  356 (435)
T ss_dssp             EET-------------------TEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEECC------SSEEEEEETTS
T ss_pred             eCC-------------------CEEEEEeCCCeEEEEECCCCCE--EEEEeCCcCcEEEEEec------CCEEEEEeCCC
Confidence            854                   5799999999999999988764  45678999999999993      56899999999


Q ss_pred             eEEEEEcCCCcc-------eeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         247 KVIIWTSNDYVT-------WTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       247 ~i~vw~~~~~~~-------~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .|++||+.....       .....+..|...|.+++|  ++++|++++.||+|++||+..+..
T Consensus       357 ~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~  417 (435)
T 1p22_A          357 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA  417 (435)
T ss_dssp             CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred             cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence            999999754321       023456678899999999  788999999999999999877543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=9.5e-32  Score=236.74  Aligned_cols=212  Identities=25%  Similarity=0.373  Sum_probs=180.3

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ..+..++.+|.+.|++++|++  ++++|++++.|++|++|+..+++..  ..+.+|...|.+++|+|+  +.++++++.|
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~--~~~l~s~~~d   86 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSD--SNLLVSASDD   86 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTT--SSEEEEEETT
T ss_pred             ceeEEEEcccCCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcccc--hhhccCCCceEEEEEcCC--CCEEEEECCC
Confidence            456778999999999999974  5899999999999999999877643  356789999999999998  6789999999


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK  215 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~  215 (318)
                      +.|++||+....   ....+.+|...+..+.|+|+                 +.+|++|+.|++|++||+.+++.  ...
T Consensus        87 ~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~-----------------~~~l~s~~~d~~i~iwd~~~~~~--~~~  144 (312)
T 4ery_A           87 KTLKIWDVSSGK---CLKTLKGHSNYVFCCNFNPQ-----------------SNLIVSGSFDESVRIWDVKTGKC--LKT  144 (312)
T ss_dssp             SEEEEEETTTCC---EEEEEECCSSCEEEEEECSS-----------------SSEEEEEETTSCEEEEETTTCCE--EEE
T ss_pred             CEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCEE--EEE
Confidence            999999975433   34566789999999999996                 46899999999999999988754  456


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      +..|...|.++.|+|+    +.+|++++.|+.|++||+..... .......+..++..++|+|+|++|++++.|+.|++|
T Consensus       145 ~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw  219 (312)
T 4ery_A          145 LPAHSDPVSAVHFNRD----GSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW  219 (312)
T ss_dssp             ECCCSSCEEEEEECTT----SSEEEEEETTSCEEEEETTTCCE-EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             ecCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEECCCCce-eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence            7889999999999996    78999999999999999987542 112223456689999999999999999999999999


Q ss_pred             EECCC
Q psy2762         296 KENTD  300 (318)
Q Consensus       296 ~~~~~  300 (318)
                      |+..+
T Consensus       220 d~~~~  224 (312)
T 4ery_A          220 DYSKG  224 (312)
T ss_dssp             ETTTT
T ss_pred             ECCCC
Confidence            98765

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-32  Score=272.74  Aligned_cols=164  Identities=10%  Similarity=0.076  Sum_probs=127.4

Q ss_pred             CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc-ceee--ec-----ccccccceeeeCCCCCCCccccccC
Q psy2762         110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW-ESRK--IA-----AHTIGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       110 ~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~-~~~~--~~-----~h~~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                      +|...+.+|+|+|+  +.++++|+.|++|++||+..+.... ....  +.     +|...|.+++|+|+           
T Consensus       433 G~~~~v~sv~~spd--g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspd-----------  499 (902)
T 2oaj_A          433 GGVRTKRQKLPAEY--GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAE-----------  499 (902)
T ss_dssp             CSBCCCCCCCCCSE--EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETT-----------
T ss_pred             CCcCCCCccccccc--CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCC-----------
Confidence            34444555566776  6799999999999999986542110 0111  11     78889999999997           


Q ss_pred             CCCCCccceEEEecCCCeEEEEEccCCe-------------------------------------------EEEEEEccc
Q psy2762         182 SKLGGVAKRLVSGGCDNLIKIWKQEGDK-------------------------------------------WIEETKLEN  218 (318)
Q Consensus       182 ~~~~~~~~~lasgs~d~~i~iwd~~~~~-------------------------------------------~~~~~~~~~  218 (318)
                            +++||+|+.|++|+|||+.+++                                           +.+...+.+
T Consensus       500 ------g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~  573 (902)
T 2oaj_A          500 ------TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA  573 (902)
T ss_dssp             ------TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC
T ss_pred             ------CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc
Confidence                  5789999999999999987652                                           123567889


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceee---EEe-eecCCcEEEEEEc-----CCC---CEEEEE
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP---FIM-NTFDDVVWNVSWS-----LTG---DILTVS  286 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~---~~~-~~~~~~v~~v~~s-----pdg---~~l~s~  286 (318)
                      |...|++|+|||+    | +||+|+.|++|+|||+.+......   ..+ .+|.+.|++|+|+     |||   ++|+++
T Consensus       574 h~~~V~svafSpd----G-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sg  648 (902)
T 2oaj_A          574 NKGKTSAINNSNI----G-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCG  648 (902)
T ss_dssp             CSCSEEEEEECBT----S-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEE
T ss_pred             CCCcEEEEEecCC----c-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEE
Confidence            9999999999996    8 999999999999999876431100   012 2688899999999     886   899999


Q ss_pred             eCCCeEEEEEE
Q psy2762         287 CGDNSVSLWKE  297 (318)
Q Consensus       287 ~~D~~v~iW~~  297 (318)
                      +.|++|++|++
T Consensus       649 s~D~tv~~wd~  659 (902)
T 2oaj_A          649 TDMGEVITYKI  659 (902)
T ss_dssp             ETTSEEEEEEE
T ss_pred             ecCCcEEEEEE
Confidence            99999999998

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.7e-31  Score=245.45  Aligned_cols=241  Identities=23%  Similarity=0.414  Sum_probs=199.9

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...||.+.|.. +++++|++|++|+.||+|+|||+.           .++.+.++.+|.+.|+++.|+    +++|++|+
T Consensus       113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~----~~~l~s~~  176 (445)
T 2ovr_B          113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV-----------TGKCLRTLVGHTGGVWSSQMR----DNIIISGS  176 (445)
T ss_dssp             EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT-----------TCCEEEECCCCSSCEEEEEEE----TTEEEEEE
T ss_pred             EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECC-----------CCcEEEEEcCCCCCEEEEEec----CCEEEEEe
Confidence            45799987643 356679999999999999999986           356788999999999999995    57999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .||+|++||+.+++  ....+.+|...|.+++|++.    .+++|+.|++|++||+....   ....+.+|..++.++.|
T Consensus       177 ~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~----~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~v~~~~~  247 (445)
T 2ovr_B          177 TDRTLKVWNAETGE--CIHTLYGHTSTVRCMHLHEK----RVVSGSRDATLRVWDIETGQ---CLHVLMGHVAAVRCVQY  247 (445)
T ss_dssp             TTSCEEEEETTTTE--EEEEECCCSSCEEEEEEETT----EEEEEETTSEEEEEESSSCC---EEEEEECCSSCEEEEEE
T ss_pred             CCCeEEEEECCcCc--EEEEECCCCCcEEEEEecCC----EEEEEeCCCEEEEEECCCCc---EEEEEcCCcccEEEEEE
Confidence            99999999998876  34467789999999999753    69999999999999985443   34456689999999988


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      ..                   .+|++|+.|+.|++||+.+++.  ...+.+|...|.++.|.      +.+|++++.|++
T Consensus       248 ~~-------------------~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~  300 (445)
T 2ovr_B          248 DG-------------------RRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFD------GIHVVSGSLDTS  300 (445)
T ss_dssp             CS-------------------SCEEEEETTSCEEEEEGGGTEE--EEEECCCSSCEEEEEEC------SSEEEEEETTSC
T ss_pred             CC-------------------CEEEEEcCCCEEEEEECCCCcE--eEEecCCCCceEEEEEC------CCEEEEEeCCCe
Confidence            42                   5799999999999999988764  45678999999999992      568999999999


Q ss_pred             EEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         248 VIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      |++||+....  ....+..|...+..+++  ++++|++++.||.|++||+..+....
T Consensus       301 i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~  353 (445)
T 2ovr_B          301 IRVWDVETGN--CIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQ  353 (445)
T ss_dssp             EEEEETTTCC--EEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred             EEEEECCCCC--EEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEE
Confidence            9999998754  23455678888888777  56799999999999999987764433

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=6.7e-33  Score=255.87  Aligned_cols=214  Identities=15%  Similarity=0.205  Sum_probs=173.4

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      ......|...|++++|+ |.++.+||+|+.||+|+|||+..+.......+.+|.+.|++|+|+|.+ +.+|++++.|++|
T Consensus       112 ~~~~~~~~~~V~~l~~~-P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v  189 (435)
T 4e54_B          112 LQKAAPFDRRATSLAWH-PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTT  189 (435)
T ss_dssp             CCEEEECSSCEEEEEEC-SSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCE
T ss_pred             cccCCCCCCCEEEEEEe-CCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEE
Confidence            44567899999999995 556889999999999999999877655566677899999999999953 5689999999999


Q ss_pred             EEEEeecCCCCcceeeec---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE
Q psy2762         139 SFLTYMSDTNSWESRKIA---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK  215 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~  215 (318)
                      ++||+...    ....+.   .+...+.+++|+|+                 +.+|++|+.||.|++||++++.   ...
T Consensus       190 ~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~~g~~dg~i~~wd~~~~~---~~~  245 (435)
T 4e54_B          190 RLQDFKGN----ILRVFASSDTINIWFCSLDVSAS-----------------SRMVVTGDNVGNVILLNMDGKE---LWN  245 (435)
T ss_dssp             EEEETTSC----EEEEEECCSSCSCCCCCEEEETT-----------------TTEEEEECSSSBEEEEESSSCB---CCC
T ss_pred             EEeeccCC----ceeEEeccCCCCccEEEEEECCC-----------------CCEEEEEeCCCcEeeeccCcce---eEE
Confidence            99997422    122222   23345678889986                 4789999999999999987643   456


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      +.+|...|++|+|+|+   ...+|++++.|++|+|||+...... ......+|...|.+++|+|||++|++++.|++|+|
T Consensus       246 ~~~h~~~v~~v~~~p~---~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i  322 (435)
T 4e54_B          246 LRMHKKKVTHVALNPC---CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV  322 (435)
T ss_dssp             SBCCSSCEEEEEECTT---CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred             EecccceEEeeeecCC---CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence            7899999999999997   3568999999999999998764321 11223568899999999999999999999999999


Q ss_pred             EEECCCC
Q psy2762         295 WKENTDG  301 (318)
Q Consensus       295 W~~~~~~  301 (318)
                      |++..+.
T Consensus       323 wd~~~~~  329 (435)
T 4e54_B          323 YSASQWD  329 (435)
T ss_dssp             EESSSSS
T ss_pred             EECCCCc
Confidence            9987654

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=2.1e-31  Score=236.16  Aligned_cols=219  Identities=27%  Similarity=0.410  Sum_probs=178.2

Q ss_pred             cceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762          55 KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILAC  131 (318)
Q Consensus        55 ~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~las  131 (318)
                      ...+..+|+||.+.|++|+|++ ..+++|||||.|++|+|||+...+   ..+...+.+|...|.+++|+|+  +.++++
T Consensus        27 ~~~l~~tL~GH~~~V~~v~~sp-~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d--g~~l~s  103 (340)
T 4aow_A           27 QMTLRGTLKGHNGWVTQIATTP-QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD--GQFALS  103 (340)
T ss_dssp             EEEEEEEECCCSSCEEEEEECT-TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT--SSEEEE
T ss_pred             ceEEEEEECCccCCEEEEEEeC-CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC--CCEEEE
Confidence            3456678999999999999964 457899999999999999987543   2355567899999999999998  779999


Q ss_pred             eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      ++.|+.|++|+.....   .......+...+....++|.                 +.+|++++.|+.+++||...... 
T Consensus       104 ~~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----------------~~~l~s~s~d~~~~~~d~~~~~~-  162 (340)
T 4aow_A          104 GSWDGTLRLWDLTTGT---TTRRFVGHTKDVLSVAFSSD-----------------NRQIVSGSRDKTIKLWNTLGVCK-  162 (340)
T ss_dssp             EETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECTT-----------------SSCEEEEETTSCEEEECTTSCEE-
T ss_pred             EcccccceEEeecccc---eeeeecCCCCceeEEEEeec-----------------CccceeecCCCeEEEEEeCCCce-
Confidence            9999999999864322   22233355556667777775                 46799999999999999876543 


Q ss_pred             EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCe
Q psy2762         212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNS  291 (318)
Q Consensus       212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~  291 (318)
                      ....+.+|...|..++|+++.  ...++++++.|++|++|+.....  ....+.+|...|.+++|+|+|++|++++.|++
T Consensus       163 ~~~~~~~~~~~v~~~~~~~~~--~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~  238 (340)
T 4aow_A          163 YTVQDESHSEWVSCVRFSPNS--SNPIIVSCGWDKLVKVWNLANCK--LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ  238 (340)
T ss_dssp             EEECSSSCSSCEEEEEECSCS--SSCEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred             EEEEeccccCcccceEEccCC--CCcEEEEEcCCCEEEEEECCCCc--eeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence            445678899999999999863  35678999999999999998754  23456678999999999999999999999999


Q ss_pred             EEEEEECCCC
Q psy2762         292 VSLWKENTDG  301 (318)
Q Consensus       292 v~iW~~~~~~  301 (318)
                      |+|||++...
T Consensus       239 i~iwd~~~~~  248 (340)
T 4aow_A          239 AMLWDLNEGK  248 (340)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEEeccCc
Confidence            9999987653

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.4e-31  Score=255.58  Aligned_cols=252  Identities=16%  Similarity=0.266  Sum_probs=187.9

Q ss_pred             ecCCCcc---eeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-c---ccccCeEEEEecCCCC
Q psy2762           8 VDTGHED---MIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-K---GHSGPVWQVAWAHPQF   79 (318)
Q Consensus         8 ~~~gH~~---~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~---~h~~~V~~v~~~~~~~   79 (318)
                      ...+|..   .|++++|+|+ +++|++++.|+.|++||+.           .++.+..+ .   +|.+.|.++.|+   +
T Consensus       198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~---~  263 (615)
T 1pgu_A          198 SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK-----------SGEFLKYIEDDQEPVQGGIFALSWL---D  263 (615)
T ss_dssp             EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT-----------TCCEEEECCBTTBCCCSCEEEEEES---S
T ss_pred             eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC-----------CCCEeEEecccccccCCceEEEEEc---C
Confidence            3467998   9999999999 9999999999999999986           34677788 6   899999999996   4


Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEE-------------------------------------------EEecCCCcCeE
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKY-------------------------------------------YEYNNHDSSVN  116 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~-------------------------------------------~~~~~h~~~v~  116 (318)
                      +.+|++++.|+.|++||+.+++....                                           ..+.+|...|.
T Consensus       264 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~  343 (615)
T 1pgu_A          264 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGIT  343 (615)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEE
T ss_pred             CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEE
Confidence            89999999999999999876543222                                           12233444444


Q ss_pred             EEEeeCC-------------------------------CCCcEEEEeecCCeEEEEEeecCCC-----------------
Q psy2762         117 SIAWAPK-------------------------------EFGLILACGSSDGTISFLTYMSDTN-----------------  148 (318)
Q Consensus       117 ~v~~~p~-------------------------------~~~~~lasgs~d~~i~i~~~~~~~~-----------------  148 (318)
                      +++| |+                               ..+..+++++.|+.|++|++.....                 
T Consensus       344 ~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~  422 (615)
T 1pgu_A          344 ALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV  422 (615)
T ss_dssp             EEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred             EEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence            4444 22                               0023456666666666665432100                 


Q ss_pred             -------------Cc----------------------------------------ce--eeecccccccceeeeCCCCCC
Q psy2762         149 -------------SW----------------------------------------ES--RKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus       149 -------------~~----------------------------------------~~--~~~~~h~~~v~~~~~~p~~~~  173 (318)
                                   ..                                        ..  ..+..|...+.+++|+|+   
T Consensus       423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---  499 (615)
T 1pgu_A          423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS---  499 (615)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTT---
T ss_pred             EeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCC---
Confidence                         00                                        00  111234444555555554   


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEcc----------CCCCCccEEEEE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAP----------SWGLSKCMIASC  242 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp----------~~~~~~~~l~s~  242 (318)
                                    +.+|++++.|+.|+|||+.+++.  ...+.+ |...|++++|+|          +    +.+|+++
T Consensus       500 --------------g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~----~~~l~~~  559 (615)
T 1pgu_A          500 --------------ETYIAAGDVMGKILLYDLQSREV--KTSRWAFRTSKINAISWKPAEKGANEEEIE----EDLVATG  559 (615)
T ss_dssp             --------------SSEEEEEETTSCEEEEETTTTEE--EECCSCCCSSCEEEEEECCCC------CCS----CCEEEEE
T ss_pred             --------------CCEEEEcCCCCeEEEeeCCCCcc--eeEeecCCCCceeEEEEcCccccccccccC----CCEEEEE
Confidence                          57899999999999999988764  455677 999999999999          5    7899999


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +.|++|++|++..... ....+.+|...|.+++|+|||+ |++++.|++|++|+++.
T Consensus       560 ~~dg~i~iw~~~~~~~-~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          560 SLDTNIFIYSVKRPMK-IIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             ETTSCEEEEESSCTTC-CEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             cCCCcEEEEECCCCce-echhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            9999999999987521 2345678899999999999999 99999999999999875

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4e-32  Score=250.06  Aligned_cols=255  Identities=12%  Similarity=0.194  Sum_probs=184.8

Q ss_pred             ceeeeeeecCCC--CEEEEeeCCCcEEEEEcCCCcCCC---CCCCCc-------------------------ceEEEE-e
Q psy2762          14 DMIHDAEMDYLG--LYLATCSSDHTVKVFNLDRNLKKD---DSHSQK-------------------------GTLIAE-L   62 (318)
Q Consensus        14 ~~v~~~~~~~~g--~~l~s~s~D~~v~vwd~~~~~~~~---~~~~~~-------------------------~~~~~~-~   62 (318)
                      +.|++++|+|++  .+|++++.|++|+|||+.......   ......                         ...... +
T Consensus        94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (447)
T 3dw8_B           94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA  173 (447)
T ss_dssp             CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence            889999999998  899999999999999986311000   000000                         011123 4


Q ss_pred             cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEE-----EecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYY-----EYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~-----~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      .+|.+.|++++|++  ++++|++| .|++|++||+.... .....     .+.+|...|.+++|+|++ ..++++|+.|+
T Consensus       174 ~~h~~~v~~~~~~~--~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg  249 (447)
T 3dw8_B          174 NAHTYHINSISINS--DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNS-CNTFVYSSSKG  249 (447)
T ss_dssp             SCCSSCCCEEEECT--TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSC-TTEEEEEETTS
T ss_pred             cCCCcceEEEEEcC--CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCC-CcEEEEEeCCC
Confidence            68999999999974  58999998 89999999998432 22221     356799999999999983 27899999999


Q ss_pred             eEEEEEeecCCCC-cceeeeccccc------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE
Q psy2762         137 TISFLTYMSDTNS-WESRKIAAHTI------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW  203 (318)
Q Consensus       137 ~i~i~~~~~~~~~-~~~~~~~~h~~------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw  203 (318)
                      .|++||+...... .....+..|..            ++.+++|+|+                 +.+|++++. +.|+||
T Consensus       250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-----------------g~~l~~~~~-~~v~iw  311 (447)
T 3dw8_B          250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHS-----------------GRYMMTRDY-LSVKVW  311 (447)
T ss_dssp             CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTT-----------------SSEEEEEES-SEEEEE
T ss_pred             eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCC-----------------CCEEEEeeC-CeEEEE
Confidence            9999998654310 01234445654            8999999997                 578999999 999999


Q ss_pred             EccC-CeEEEEEEcccCCCC---------------eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE----
Q psy2762         204 KQEG-DKWIEETKLENHSDW---------------VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI----  263 (318)
Q Consensus       204 d~~~-~~~~~~~~~~~h~~~---------------V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~----  263 (318)
                      |+.. +++  ...+.+|...               +..++|+|+    +.+|++++.|+.|+|||+.+........    
T Consensus       312 d~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~----~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~  385 (447)
T 3dw8_B          312 DLNMENRP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGS----DSVVMTGSYNNFFRMFDRNTKRDITLEASREN  385 (447)
T ss_dssp             ETTCCSSC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTT----SSEEEEECSTTEEEEEETTTCCEEEEECCSTT
T ss_pred             eCCCCccc--cceeeccccccccccccccccccccceEEEECCC----CCEEEEeccCCEEEEEEcCCCcceeeeecccc
Confidence            9976 443  3455667532               234999996    8899999999999999988754211000    


Q ss_pred             --------------------------eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         264 --------------------------MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       264 --------------------------~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                                                ...+...|..++|+|+|++||+++.++ +.+|..
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          386 NKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             CCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred             cccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence                                      012345789999999999999888775 788864

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.4e-30  Score=240.61  Aligned_cols=242  Identities=20%  Similarity=0.313  Sum_probs=201.4

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|.+.|.+++|+  +++|++|+.||+|++||+.           .++.+.++.+|...|.++.|.    ++.|++|+
T Consensus       154 ~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~-----------~~~~~~~~~~h~~~v~~~~~~----~~~l~s~s  216 (445)
T 2ovr_B          154 TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE-----------TGECIHTLYGHTSTVRCMHLH----EKRVVSGS  216 (445)
T ss_dssp             ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEEE----TTEEEEEE
T ss_pred             EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC-----------cCcEEEEECCCCCcEEEEEec----CCEEEEEe
Confidence            456899999999997  6799999999999999996           357788999999999999984    57899999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++||+.+++.  ...+.+|...|.+++|.    +.++++++.|+.|++||.....   ....+.+|...+.++.|
T Consensus       217 ~dg~i~~wd~~~~~~--~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~  287 (445)
T 2ovr_B          217 RDATLRVWDIETGQC--LHVLMGHVAAVRCVQYD----GRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF  287 (445)
T ss_dssp             TTSEEEEEESSSCCE--EEEEECCSSCEEEEEEC----SSCEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE
T ss_pred             CCCEEEEEECCCCcE--EEEEcCCcccEEEEEEC----CCEEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE
Confidence            999999999988764  34567899999999993    4579999999999999975442   34456688889999988


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      .                   +.+|++++.|+.|++||+.+++.  ...+.+|...+.++.+++      .+|++++.|+.
T Consensus       288 ~-------------------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~  340 (445)
T 2ovr_B          288 D-------------------GIHVVSGSLDTSIRVWDVETGNC--IHTLTGHQSLTSGMELKD------NILVSGNADST  340 (445)
T ss_dssp             C-------------------SSEEEEEETTSCEEEEETTTCCE--EEEECCCCSCEEEEEEET------TEEEEEETTSC
T ss_pred             C-------------------CCEEEEEeCCCeEEEEECCCCCE--EEEEcCCcccEEEEEEeC------CEEEEEeCCCe
Confidence            3                   35899999999999999988764  456789999999988854      48999999999


Q ss_pred             EEEEEcCCCcceeeEEeee---cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMNT---FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~~---~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      |++||+.....  ...+..   |...|.+++|+  +++|++++.||+|++|+...+.....+
T Consensus       341 i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~  398 (445)
T 2ovr_B          341 VKIWDIKTGQC--LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNL  398 (445)
T ss_dssp             EEEEETTTCCE--EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EEEEECCCCcE--EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeee
Confidence            99999976542  233333   77889999996  679999999999999998877555544

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-31  Score=267.98  Aligned_cols=246  Identities=13%  Similarity=0.124  Sum_probs=191.1

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..||.+.|++++|+|++++||+|+.||+|+||+...           ...+..+ .|...|++++|++   +++|+|++.
T Consensus        13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~-----------~~~~~~~-~~~~~V~~l~fsp---g~~L~S~s~   77 (902)
T 2oaj_A           13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQ-----------VEVVIKL-EDRSAIKEMRFVK---GIYLVVINA   77 (902)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTT-----------CEEEEEC-SSCCCEEEEEEET---TTEEEEEET
T ss_pred             ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCC-----------cEEEEEc-CCCCCEEEEEEcC---CCEEEEEEC
Confidence            358999999999999999999999999999999752           3334443 4889999999973   679999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC-cce-------eeeccccc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS-WES-------RKIAAHTI  160 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~-~~~-------~~~~~h~~  160 (318)
                      |++|+|||+.+++....+  . |...|.+++|+|+  +.++++|+.||+|++||+...... ...       ....+|..
T Consensus        78 D~~v~lWd~~~~~~~~~~--~-~~~~V~~v~~sp~--g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~  152 (902)
T 2oaj_A           78 KDTVYVLSLYSQKVLTTV--F-VPGKITSIDTDAS--LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS  152 (902)
T ss_dssp             TCEEEEEETTTCSEEEEE--E-CSSCEEEEECCTT--CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred             cCeEEEEECCCCcEEEEE--c-CCCCEEEEEECCC--CCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence            999999999988754443  3 6688999999998  779999999999999997433210 000       12357889


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc------------------CCCC
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN------------------HSDW  222 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~------------------h~~~  222 (318)
                      +|.+++|+|+.                ...|++|+.|++| |||+++++...  .+..                  |...
T Consensus       153 ~V~sl~~sp~~----------------~~~l~~g~~dg~v-lWd~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~h~~~  213 (902)
T 2oaj_A          153 PIVSIQWNPRD----------------IGTVLISYEYVTL-TYSLVENEIKQ--SFIYELPPFAPGGDFSEKTNEKRTPK  213 (902)
T ss_dssp             CCCEEEEETTE----------------EEEEEEECSSCEE-EEETTTTEEEE--EECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred             CeEEEEEccCC----------------CCEEEEEeCCCcE-EEECCCCceEE--EEecccCCcCCCcccccccccccCCC
Confidence            99999999952                3579999999999 99998876543  3333                  3578


Q ss_pred             eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe---e-------------ecCCcEEEEEEc----CCC-C
Q psy2762         223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---N-------------TFDDVVWNVSWS----LTG-D  281 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~---~-------------~~~~~v~~v~~s----pdg-~  281 (318)
                      |++++|+|+    +.+|++++.|++|+|||+.+........+   .             .+..+|.+++|+    ||+ .
T Consensus       214 V~~v~fspd----g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~  289 (902)
T 2oaj_A          214 VIQSLYHPN----SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTS  289 (902)
T ss_dssp             EEEEEECTT----SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEE
T ss_pred             eEEEEEcCC----CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCE
Confidence            999999996    88999999999999999977532111011   0             124579999995    554 5


Q ss_pred             EEEEEeCCC-----eEEEEEE
Q psy2762         282 ILTVSCGDN-----SVSLWKE  297 (318)
Q Consensus       282 ~l~s~~~D~-----~v~iW~~  297 (318)
                      +|++++.|.     ++++|+.
T Consensus       290 ll~sg~~~~~~~~~~v~~~~~  310 (902)
T 2oaj_A          290 LLISHKSISRGDNQSLTMIDL  310 (902)
T ss_dssp             EEEEEECSTTSSCCCEEEEEE
T ss_pred             EEEeCCCCCCCCCceEEEEec
Confidence            677777763     7889985

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=9e-32  Score=243.02  Aligned_cols=206  Identities=15%  Similarity=0.129  Sum_probs=163.5

Q ss_pred             CCcceeeeeeecCCCCEEEE--eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          11 GHEDMIHDAEMDYLGLYLAT--CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s--~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .+...+.+++|+|||++|++  ++.|++|+|||+.           .+..+..+. |.+.|++++|++  +|++|++++.
T Consensus       131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~-----------~~~~~~~~~-~~~~V~~v~fsp--dg~~l~s~s~  196 (365)
T 4h5i_A          131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS-----------DLTEKFEIE-TRGEVKDLHFST--DGKVVAYITG  196 (365)
T ss_dssp             CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT-----------TTEEEEEEE-CSSCCCEEEECT--TSSEEEEECS
T ss_pred             CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC-----------CCcEEEEeC-CCCceEEEEEcc--CCceEEeccc
Confidence            45667899999999999764  5579999999986           345666664 888999999974  5999999986


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----eEEEEEeecCCCC-cceeeecccccccc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----TISFLTYMSDTNS-WESRKIAAHTIGCN  163 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----~i~i~~~~~~~~~-~~~~~~~~h~~~v~  163 (318)
                      |+ +++|+..++..........|...|.+++|+|+  +.++++++.|+    .+++|+....... .....+.+|..+|.
T Consensus       197 ~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd--g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~  273 (365)
T 4h5i_A          197 SS-LEVISTVTGSCIARKTDFDKNWSLSKINFIAD--DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT  273 (365)
T ss_dssp             SC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEET--TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred             ee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCC--CCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence            65 55555555554444445678899999999998  77888888887    5777876543211 11234568889999


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +++|+|+                 +++||+|+.|++|+|||++++++.. ..+.+|..+|++|+|||+    +.+|||+|
T Consensus       274 ~~~~Spd-----------------g~~lasgs~D~~V~iwd~~~~~~~~-~~~~gH~~~V~~v~fSpd----g~~laS~S  331 (365)
T 4h5i_A          274 SMDVDMK-----------------GELAVLASNDNSIALVKLKDLSMSK-IFKQAHSFAITEVTISPD----STYVASVS  331 (365)
T ss_dssp             EEEECTT-----------------SCEEEEEETTSCEEEEETTTTEEEE-EETTSSSSCEEEEEECTT----SCEEEEEE
T ss_pred             eEEECCC-----------------CCceEEEcCCCEEEEEECCCCcEEE-EecCcccCCEEEEEECCC----CCEEEEEe
Confidence            9999997                 5799999999999999999886532 235899999999999996    89999999


Q ss_pred             CCCeEEEEEcCC
Q psy2762         244 QDRKVIIWTSND  255 (318)
Q Consensus       244 ~D~~i~vw~~~~  255 (318)
                      .|++||||++..
T Consensus       332 ~D~tvrvw~ip~  343 (365)
T 4h5i_A          332 AANTIHIIKLPL  343 (365)
T ss_dssp             TTSEEEEEECCT
T ss_pred             CCCeEEEEEcCC
Confidence            999999999864

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-31  Score=239.24  Aligned_cols=227  Identities=21%  Similarity=0.332  Sum_probs=182.3

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      +++..+.+|.+.|++++|++  ++++||+|+.||+|+|||+..........+.+|...|.+++|+|+..+.++++++.|+
T Consensus         2 ~~~~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg   79 (379)
T 3jrp_A            2 SMVVIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG   79 (379)
T ss_dssp             ---CCEEECCCCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             CccEEecCCcccEEEEEEcC--CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence            34667889999999999974  5899999999999999999865555666778899999999999764467899999999


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL  216 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~  216 (318)
                      .|++|++..... .....+..|..++.+++|+|+.               .+.+|++++.|+.|++||+..+.......+
T Consensus        80 ~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~---------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~  143 (379)
T 3jrp_A           80 KVLIWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPLLLVASSDGKVSVVEFKENGTTSPIII  143 (379)
T ss_dssp             CEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred             EEEEEEcCCCce-eEeeeecCCCcceEEEEeCCCC---------------CCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence            999999865421 1234455788999999999962               035899999999999999887643344567


Q ss_pred             ccCCCCeeEEEEccCCC---------CCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEEEEEcCC---CCE
Q psy2762         217 ENHSDWVRDVAWAPSWG---------LSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWNVSWSLT---GDI  282 (318)
Q Consensus       217 ~~h~~~V~~v~~sp~~~---------~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~v~~spd---g~~  282 (318)
                      .+|...|++++|+|...         .++.+|++++.|+.|++||+......  ....+..|...|.+++|+|+   +++
T Consensus       144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~  223 (379)
T 3jrp_A          144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  223 (379)
T ss_dssp             ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence            78999999999999310         02779999999999999998764321  12345578899999999999   899


Q ss_pred             EEEEeCCCeEEEEEECCCC
Q psy2762         283 LTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       283 l~s~~~D~~v~iW~~~~~~  301 (318)
                      |++++.||.|+||+++.+.
T Consensus       224 l~s~~~dg~i~iwd~~~~~  242 (379)
T 3jrp_A          224 LASVSQDRTCIIWTQDNEQ  242 (379)
T ss_dssp             EEEEETTSCEEEEEESSTT
T ss_pred             EEEEeCCCEEEEEeCCCCC
Confidence            9999999999999998754

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=5.3e-31  Score=260.27  Aligned_cols=251  Identities=22%  Similarity=0.273  Sum_probs=205.3

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|++++|+|++++|++|+.||+|+|||+.           .+..+.++.+|.+.|++++|++  ++.+|++++
T Consensus        50 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~-----------~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~  116 (814)
T 3mkq_A           50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-----------TGEKVVDFEAHPDYIRSIAVHP--TKPYVLSGS  116 (814)
T ss_dssp             EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECS--SSSEEEEEE
T ss_pred             EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-----------CCcEEEEEecCCCCEEEEEEeC--CCCEEEEEc
Confidence            345899999999999999999999999999999986           3567888999999999999974  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~  166 (318)
                      .||+|++||+.++.. ....+.+|...|.+++|+|++ +.++++++.|+.|++|+......   ...+. .|..++..++
T Consensus       117 ~dg~i~vw~~~~~~~-~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~  191 (814)
T 3mkq_A          117 DDLTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVD  191 (814)
T ss_dssp             TTSEEEEEEGGGTSE-EEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEE
T ss_pred             CCCEEEEEECCCCce-EEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEE
Confidence            999999999987632 344567899999999999932 67899999999999999754332   22333 4457899999


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      |+|..               .+.+|++++.|+.|++||..+++.  ...+.+|...|.+++|+|+    +.+|++++.|+
T Consensus       192 ~~~~~---------------~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg  250 (814)
T 3mkq_A          192 YYPLP---------------DKPYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPT----LPIIISGSEDG  250 (814)
T ss_dssp             ECCST---------------TCCEEEEECTTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSS----SSEEEEEETTS
T ss_pred             EEECC---------------CCCEEEEEeCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCC----CCEEEEEeCCC
Confidence            99831               146899999999999999988764  4566789999999999996    78999999999


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCE-EEEEeCCCeEEEEEECC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDI-LTVSCGDNSVSLWKENT  299 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~-l~s~~~D~~v~iW~~~~  299 (318)
                      .|++|+..+..  ....+..+...|++++|+|+|+. +++++.|+.+.+|+...
T Consensus       251 ~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (814)
T 3mkq_A          251 TLKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN  302 (814)
T ss_dssp             CEEEEETTTCS--EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred             eEEEEECCCCc--EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence            99999998754  23445567789999999999973 23444577889998654

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=4.9e-31  Score=237.24  Aligned_cols=250  Identities=14%  Similarity=0.130  Sum_probs=179.4

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~   88 (318)
                      .+|...|++++|+|+|++|++|+.| .++|||++.           +..+...  +...+..+.+.+.  ++.+ ++++.
T Consensus        16 ~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~-----------~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~   79 (355)
T 3vu4_A           16 NHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHP-----------VAHIMSQ--EMRHLSKVRMLHR--TNYVAFVTGV   79 (355)
T ss_dssp             ---CCCCCEEEECTTSSEEEEECSS-EEEEEEETT-----------EEEEEEE--ECSCCCEEEECTT--SSEEEEECSS
T ss_pred             ccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCC-----------cceeeee--ecCCeEEEEEcCC--CCEEEEEECC
Confidence            6899999999999999999998866 589999862           3333332  2234677777643  4444 67888


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCC---------------CC------------------cEEEE--ee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE---------------FG------------------LILAC--GS  133 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~---------------~~------------------~~las--gs  133 (318)
                      |++|+|||..+++....  +. |...|.+++|+++.               .+                  .++++  |+
T Consensus        80 d~~v~iWd~~~~~~~~~--~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~  156 (355)
T 3vu4_A           80 KEVVHIWDDVKKQDVSR--IK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEF  156 (355)
T ss_dssp             TTEEEEEETTTTEEEEE--EE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESS
T ss_pred             ccEEEEEECCCCcEEEE--EE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCC
Confidence            99999999988865443  33 56789999888751               00                  12222  56


Q ss_pred             cCCeEEEEEeecCCC------C------cc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCe-
Q psy2762         134 SDGTISFLTYMSDTN------S------WE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNL-  199 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~------~------~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~-  199 (318)
                      .||.|++||+.....      .      .. ...+.+|..+|.+++|+|+                 +.+||+|+.|++ 
T Consensus       157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-----------------g~~l~s~s~d~~~  219 (355)
T 3vu4_A          157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-----------------SDMVATCSQDGTI  219 (355)
T ss_dssp             CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-----------------SSEEEEEETTCSE
T ss_pred             cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-----------------CCEEEEEeCCCCE
Confidence            777888887643220      0      00 3456689999999999997                 578999999998 


Q ss_pred             EEEEEccCCeEEEEEEcc-c-CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe-------------
Q psy2762         200 IKIWKQEGDKWIEETKLE-N-HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM-------------  264 (318)
Q Consensus       200 i~iwd~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~-------------  264 (318)
                      |+|||+.++++.  .++. + |...|++++|+|+    +.+|++++.|++|+||++..........+             
T Consensus       220 v~iwd~~~~~~~--~~~~~g~h~~~v~~~~~s~~----~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (355)
T 3vu4_A          220 IRVFKTEDGVLV--REFRRGLDRADVVDMKWSTD----GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW  293 (355)
T ss_dssp             EEEEETTTCCEE--EEEECTTCCSCEEEEEECTT----SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred             EEEEECCCCcEE--EEEEcCCCCCcEEEEEECCC----CCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccc
Confidence            999999987653  4455 5 9999999999996    88999999999999999876431111110             


Q ss_pred             -------e-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         265 -------N-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       265 -------~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                             . ........++|+|||+.|++++.||.+++|++..++
T Consensus       294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          294 SLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             CSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             ceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence                   0 011223678999999999999999999999986643

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-31  Score=240.01  Aligned_cols=243  Identities=11%  Similarity=0.094  Sum_probs=180.1

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      .....+.+++.+|++|+.||+|+|||+..           ++.+..+.  ...|.++.|. |.    +++++.|++|++|
T Consensus        39 ~~~~~~~~d~~~l~sg~~Dg~v~iwd~~~-----------~~~~~~~~--~~~v~~~~~~-~~----~~s~s~D~~i~~w  100 (343)
T 3lrv_A           39 ELNKSMYYDKWVCMCRCEDGALHFTQLKD-----------SKTITTIT--TPNPRTGGEH-PA----IISRGPCNRLLLL  100 (343)
T ss_dssp             EECSSSSEEEEEEEEEEETTEEEEEEESS-----------SSCEEEEE--EECCCTTCCC-CS----EEEECSTTEEEEE
T ss_pred             hhhhhhcCCCCEEEEECCCCcEEEEECCC-----------CcEEEEEe--cCCceeeeeC-Cc----eEEecCCCeEEEE
Confidence            33345567889999999999999999973           34455554  5678888874 42    9999999999999


Q ss_pred             eCC---------CCcEEEEEEecCCCcCeEEEEeeC--CCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccc
Q psy2762          96 RGD---------NGNWFKYYEYNNHDSSVNSIAWAP--KEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCN  163 (318)
Q Consensus        96 d~~---------~~~~~~~~~~~~h~~~v~~v~~~p--~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~  163 (318)
                      +..         ++....... .+|...|.+++|+|  +  +.++++++.|++|++||+..+.   ..... ..|...+.
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i~~wd~~~~~---~~~~~~~~~~~~i~  174 (343)
T 3lrv_A          101 YPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVN--TEYFIWADNRGTIGFQSYEDDS---QYIVHSAKSDVEYS  174 (343)
T ss_dssp             ETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC-----CCEEEEEETTCCEEEEESSSSC---EEEEECCCSSCCCC
T ss_pred             EccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCC--CCEEEEEeCCCcEEEEECCCCc---EEEEEecCCCCceE
Confidence            765         332222222 25778899999999  6  7799999999999999985443   12222 24556799


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      +++|+|+                 +.+||+|+.|+.|+|||+++++.. ...+.+ |..+|++|+|+|+    +.+|+++
T Consensus       175 ~~~~~pd-----------------g~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~----g~~l~s~  232 (343)
T 3lrv_A          175 SGVLHKD-----------------SLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADN----GYWMVVE  232 (343)
T ss_dssp             EEEECTT-----------------SCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTT----SSEEEEE
T ss_pred             EEEECCC-----------------CCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCC----CCEEEEE
Confidence            9999997                 578999999999999999887532 145677 9999999999996    8899999


Q ss_pred             eCCCeEEEEEcCCCccee-eEEeeecCCcE--EEEEEcCCCCEEEEEeC-CCeEEEEEECCCC-ceEE
Q psy2762         243 SQDRKVIIWTSNDYVTWT-PFIMNTFDDVV--WNVSWSLTGDILTVSCG-DNSVSLWKENTDG-AWQC  305 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~-~~~~~~~~~~v--~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~-~~~~  305 (318)
                      +.| +|++||+....... ...+..+...+  .+++|+|+|++|++++. |+.++||+.+... .|..
T Consensus       233 ~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~  299 (343)
T 3lrv_A          233 CDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK  299 (343)
T ss_dssp             ESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred             eCC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence            955 99999998754211 11111122233  35999999999999998 9999999986644 4765

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-32  Score=250.77  Aligned_cols=249  Identities=12%  Similarity=0.091  Sum_probs=187.6

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCC-CCC-----------------CCCcceEEEEec-ccccCeE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-DDS-----------------HSQKGTLIAELK-GHSGPVW   70 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-~~~-----------------~~~~~~~~~~~~-~h~~~V~   70 (318)
                      ..-...|.+++|+|||+++||+|.|++|+  |....... .+.                 .-..+.....+. .|...|+
T Consensus        12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~   89 (588)
T 2j04_A           12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR   89 (588)
T ss_dssp             CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred             hHhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence            34568999999999999999999999998  54321100 000                 000011011222 5688899


Q ss_pred             EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc-----CeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS-----SVNSIAWAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      +++|+|  +|.+||+++.||+|+|||.++    ....+. |..     .|.+++|+|+  +.+||+|+.||+|++|+...
T Consensus        90 ~vawSP--dG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~  160 (588)
T 2j04_A           90 VCKPSP--IDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRK  160 (588)
T ss_dssp             EEEECS--SSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCC
T ss_pred             EEEECC--CCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCC
Confidence            999985  599999999999999999543    333455 555     4999999999  78999999999999999854


Q ss_pred             CCCC-c---ceeee----cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-EEEEc
Q psy2762         146 DTNS-W---ESRKI----AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKL  216 (318)
Q Consensus       146 ~~~~-~---~~~~~----~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-~~~~~  216 (318)
                      +.-. .   ....+    .+|...|.+++|+|+                 +  +|+++.|++||+||+.++... ...++
T Consensus       161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-----------------g--Laass~D~tVrlWd~~~~~~~~~~~tL  221 (588)
T 2j04_A          161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-----------------V--LVAALSNNSVFSMTVSASSHQPVSRMI  221 (588)
T ss_dssp             CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-----------------E--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred             CccccccceeeeeeecccccccccEEEEEEcCC-----------------c--EEEEeCCCeEEEEECCCCccccceeee
Confidence            3210 0   12333    568889999999996                 4  889999999999999876532 12345


Q ss_pred             -ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE--cCCCCEEEEEeCCCeEE
Q psy2762         217 -ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW--SLTGDILTVSCGDNSVS  293 (318)
Q Consensus       217 -~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~--spdg~~l~s~~~D~~v~  293 (318)
                       .+|...|.+|+|+ +     ..||+++ |++|++|+..+...  .....+|.+.|++++|  +||++.|+++++||+ |
T Consensus       222 ~~~h~~~V~svaFs-g-----~~LASa~-~~tIkLWd~~~~~~--~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-k  291 (588)
T 2j04_A          222 QNASRRKITDLKIV-D-----YKVVLTC-PGYVHKIDLKNYSI--SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-K  291 (588)
T ss_dssp             ECCCSSCCCCEEEE-T-----TEEEEEC-SSEEEEEETTTTEE--EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-E
T ss_pred             cccccCcEEEEEEE-C-----CEEEEEe-CCeEEEEECCCCeE--EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-E
Confidence             4788999999998 2     5788887 69999999887531  1223379999999999  999999999999999 9


Q ss_pred             EEEEC
Q psy2762         294 LWKEN  298 (318)
Q Consensus       294 iW~~~  298 (318)
                      +|..+
T Consensus       292 lw~~d  296 (588)
T 2j04_A          292 VLLED  296 (588)
T ss_dssp             EEESS
T ss_pred             EEeec
Confidence            99965

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.1e-29  Score=233.14  Aligned_cols=243  Identities=22%  Similarity=0.394  Sum_probs=191.4

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEE--EecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA--ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .++.++|+++ ++|+.| .|++|+|||...           ++++.  .+.+|.+.|++|+|++  +|++||+|+.||+|
T Consensus       107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~t-----------g~~~~~~~~~~~~~~V~sv~fsp--dg~~lasgs~Dg~v  171 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASS-----------GDILQLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEV  171 (420)
T ss_dssp             TCBCEEECTT-SEEEEE-ETTEEEEEETTT-----------CCEEEEEECCSTTCCEEEEEECT--TSSEEEEEETTSCE
T ss_pred             cceeEEECCC-CEEEEE-eCCEEEEEECCC-----------CCEEEEEEecCCCCcEEEEEECC--CCCEEEEEECCCeE
Confidence            3556889875 577765 499999999873           44444  4557889999999974  59999999999999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      +|||+.+++.  ...+.+|...+.++++++    .++++|+.|+.+++|+.....  .....+.+|...+..+.|+|+  
T Consensus       172 ~iWd~~~~~~--~~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~--~~~~~~~~h~~~~~~~~~~~~--  241 (420)
T 4gga_A          172 QLWDVQQQKR--LRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPD--  241 (420)
T ss_dssp             EEEETTTTEE--EEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTT--
T ss_pred             EEEEcCCCcE--EEEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccc--eeeEEecccccceeeeeecCC--
Confidence            9999998764  446778999999999875    479999999999999874432  234556789999999999996  


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCCCCCccEEEE--EeCCCeE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSWGLSKCMIAS--CSQDRKV  248 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s--~s~D~~i  248 (318)
                                     +.++++++.|+.|+||+...++.  ........|...|.+++|+|.   .+.++++  |+.|++|
T Consensus       242 ---------------g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~---~~~~la~~~gs~D~~I  303 (420)
T 4gga_A          242 ---------------GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW---QSNVLATGGGTSDRHI  303 (420)
T ss_dssp             ---------------SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTT---CTTEEEEEECTTTCEE
T ss_pred             ---------------CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCC---cccEEEEEeecCCCEE
Confidence                           57899999999999999876531  123456789999999999997   4566665  4589999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCCCce
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTDGAW  303 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~~~~  303 (318)
                      +|||+.+...  .. .......|.++.|+|+++.|++++  .|++|+|||...+...
T Consensus       304 ~iwd~~t~~~--~~-~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v  357 (420)
T 4gga_A          304 RIWNVCSGAC--LS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV  357 (420)
T ss_dssp             EEEETTTTEE--EE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE
T ss_pred             EEEeCCcccc--ce-eeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE
Confidence            9999987542  22 223456789999999999998876  6999999998765433

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.98  E-value=1.2e-30  Score=229.45  Aligned_cols=214  Identities=14%  Similarity=0.098  Sum_probs=153.1

Q ss_pred             CcceeeeeeecCC----CCEEEEeeC--------------------CCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc
Q psy2762          12 HEDMIHDAEMDYL----GLYLATCSS--------------------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG   67 (318)
Q Consensus        12 H~~~v~~~~~~~~----g~~l~s~s~--------------------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~   67 (318)
                      |...|+.++|+|+    ++++++++.                    |++|++|++..          .+..+.++.+|..
T Consensus       110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~----------dG~~~~s~~~~~~  179 (356)
T 2w18_A          110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE----------DGGGKENQFLMPP  179 (356)
T ss_dssp             SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT----------TSCEEEEEEECCC
T ss_pred             cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC----------CCceeeeeccCCC
Confidence            4568888889999    888887663                    88888888741          3567788889999


Q ss_pred             CeEEEEecC-CCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC---cCeEEEEeeCCCCCcEEEEeecCCeEEEEEe
Q psy2762          68 PVWQVAWAH-PQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD---SSVNSIAWAPKEFGLILACGSSDGTISFLTY  143 (318)
Q Consensus        68 ~V~~v~~~~-~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~  143 (318)
                      .|..++|++ +.++.+|||+|.|++|||||+.+++...+  +.+|.   ..+.+++|+|+  +.++++++.+..  +   
T Consensus       180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~t--L~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~--~---  250 (356)
T 2w18_A          180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKK--MHIDDSYQASVCHKAYSEM--GLLFIVLSHPCA--K---  250 (356)
T ss_dssp             SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEE--EECCC---CCCEEEEEEET--TEEEEEEC----------
T ss_pred             ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEE--EcCCCcceeeeEEEEECCC--CCEEEEeccCCC--c---
Confidence            999999975 44679999999999999999999885554  44433   46788899998  677776654321  1   


Q ss_pred             ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE---cccCC
Q psy2762         144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---LENHS  220 (318)
Q Consensus       144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---~~~h~  220 (318)
                                                                   ..+++|+.|++|++||..+++......   ..+|.
T Consensus       251 ---------------------------------------------w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~  285 (356)
T 2w18_A          251 ---------------------------------------------ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA  285 (356)
T ss_dssp             ----------------------------------------------------CCEEEEEEETTTTEEEEEEEECCCTTCC
T ss_pred             ---------------------------------------------ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc
Confidence                                                         137899999999999999886543222   14776


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE-EEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW-NVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~-~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ..+.+..++      +..+|+++.|++|+|||+.....  ...+.+|...+. .++|||||++|+||+.|++|||||.
T Consensus       286 ~~~lsg~~s------g~~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          286 GRFLEGDVK------DHCAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CCEEEEEEE------TTEEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             ceeEccccC------CCEEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            655444443      56899999999999999988652  345666766555 5899999999999999999999985

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.98  E-value=5e-31  Score=234.09  Aligned_cols=239  Identities=9%  Similarity=0.094  Sum_probs=192.8

Q ss_pred             CCCcceeeeeeecCCCC-EEEEeeCCCcEEEEEc-CCCcCCCCCCCCcceEEEEecc--cccCeEEEEecCCCCCcEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNL-DRNLKKDDSHSQKGTLIAELKG--HSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~-~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+|...|++++|+|+++ +|++|+.||.|++||+ ...           . ...+.+  |...|.+++|++   +.+|++
T Consensus        53 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-----------~-~~~~~~~~~~~~v~~l~~~~---~~~l~s  117 (342)
T 1yfq_A           53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-----------S-FQALTNNEANLGICRICKYG---DDKLIA  117 (342)
T ss_dssp             EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-----------S-EEECBSCCCCSCEEEEEEET---TTEEEE
T ss_pred             eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-----------c-eEeccccCCCCceEEEEeCC---CCEEEE
Confidence            48999999999999999 9999999999999998 632           2 367888  999999999973   789999


Q ss_pred             EECCCeEEEEeCCC---------CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec-CCCCcceeee
Q psy2762          86 CSYDRKVIIWRGDN---------GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS-DTNSWESRKI  155 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~---------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~-~~~~~~~~~~  155 (318)
                      ++.|+.|++||+.+         .+  ....+. |...|.+++|+|+  .  +++++.|+.|++|++.. .... .....
T Consensus       118 ~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~-~~~~v~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~~-~~~~~  189 (342)
T 1yfq_A          118 ASWDGLIEVIDPRNYGDGVIAVKNL--NSNNTK-VKNKIFTMDTNSS--R--LIVGMNNSQVQWFRLPLCEDDN-GTIEE  189 (342)
T ss_dssp             EETTSEEEEECHHHHTTBCEEEEES--CSSSSS-SCCCEEEEEECSS--E--EEEEESTTEEEEEESSCCTTCC-CEEEE
T ss_pred             EcCCCeEEEEcccccccccccccCC--eeeEEe-eCCceEEEEecCC--c--EEEEeCCCeEEEEECCcccccc-ceeee
Confidence            99999999999875         33  222333 7889999999987  3  88999999999999865 3221 12233


Q ss_pred             cccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--e--EEEEEEcccCCC---------
Q psy2762         156 AAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--K--WIEETKLENHSD---------  221 (318)
Q Consensus       156 ~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~--~~~~~~~~~h~~---------  221 (318)
                      ..|...+.+++|+| +                 +.+|++++.|+.|+||+++..  +  ......+..|..         
T Consensus       190 ~~~~~~i~~i~~~~~~-----------------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
T 1yfq_A          190 SGLKYQIRDVALLPKE-----------------QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY  252 (342)
T ss_dssp             CSCSSCEEEEEECSGG-----------------GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred             cCCCCceeEEEECCCC-----------------CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence            46778899999999 6                 468999999999999998765  0  012344566654         


Q ss_pred             CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCe-EEEEE
Q psy2762         222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNS-VSLWK  296 (318)
Q Consensus       222 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~-v~iW~  296 (318)
                      .|++++|+|+    +.+|++++.|+.|++||+....  ....+..| ..+|.+++  |+|++|++++.||+ .+.|.
T Consensus       253 ~i~~~~~s~~----~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          253 PVNSIEFSPR----HKFLYTAGSDGIISCWNLQTRK--KIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             CEEEEEECTT----TCCEEEEETTSCEEEEETTTTE--EEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             eEEEEEEcCC----CCEEEEecCCceEEEEcCccHh--HhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence            9999999996    7889999999999999998654  24456677 89999999  99999999999998 55554

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.98  E-value=7e-30  Score=236.54  Aligned_cols=258  Identities=15%  Similarity=0.040  Sum_probs=195.5

Q ss_pred             CCCcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--ccccCeEEEEecCCCCCcEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--GHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .+|.+.|++++|+|+|++| ++|+.|++|+|||+...         .+..+..+.  .|...|++++|++  ++.+|++|
T Consensus        99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~  167 (450)
T 2vdu_B           99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKT---------SKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIA  167 (450)
T ss_dssp             -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSS---------SSSCEEEEEEEECSSCEEEEEECT--TSSEEEEE
T ss_pred             CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCC---------CCceeeeeecccCCCCceEEEEcC--CCCEEEEE
Confidence            3678899999999999996 89999999999998611         133455555  5679999999974  58999999


Q ss_pred             ECCCeEEEEeCCCCcEE--EEEEecCCCcCeEEEEeeCC-CCCcEEEEeecCCeEEEEEeecCCCCcceee-eccccccc
Q psy2762          87 SYDRKVIIWRGDNGNWF--KYYEYNNHDSSVNSIAWAPK-EFGLILACGSSDGTISFLTYMSDTNSWESRK-IAAHTIGC  162 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~--~~~~~~~h~~~v~~v~~~p~-~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~-~~~h~~~v  162 (318)
                      +.|+.|.+|++.+....  ....+.+|...|.+++|+|+ +.+.++++++.|+.|++||+....   .... +.+|...|
T Consensus       168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~h~~~v  244 (450)
T 2vdu_B          168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---IVDKWLFGHKHFV  244 (450)
T ss_dssp             ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---CEEEECCCCSSCE
T ss_pred             eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---eeeeeecCCCCce
Confidence            99999999998765422  12245679999999999997 235689999999999999985443   2333 45899999


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-----------------------cC
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-----------------------NH  219 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-----------------------~h  219 (318)
                      .+++|+ +                 +.+|++++.|++|+|||+.++++.......                       .+
T Consensus       245 ~~~~~s-d-----------------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (450)
T 2vdu_B          245 SSICCG-K-----------------DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII  306 (450)
T ss_dssp             EEEEEC-S-----------------TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred             EEEEEC-C-----------------CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence            999999 5                 478999999999999999888654433321                       23


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEc--CCCcc-eeeEEeeecCCcEEEEEEcCCCCEEEEEeC------C
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTS--NDYVT-WTPFIMNTFDDVVWNVSWSLTGDILTVSCG------D  289 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~--~~~~~-~~~~~~~~~~~~v~~v~~spdg~~l~s~~~------D  289 (318)
                      ...|.++.|+|+    +.+|++++ .|+.|+||++  ..... .....+..+ ..|.+++|+|++.+++.++.      +
T Consensus       307 ~~~v~~i~~~~~----~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~  381 (450)
T 2vdu_B          307 EFAVSKIIKSKN----LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQK  381 (450)
T ss_dssp             CCCEEEEEECSS----SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCC
T ss_pred             eEEEEEEEEeCC----CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCC
Confidence            456899999996    78888888 8999999999  33211 122233444 78999999996544444443      5


Q ss_pred             CeEEEEEECC-CCceE
Q psy2762         290 NSVSLWKENT-DGAWQ  304 (318)
Q Consensus       290 ~~v~iW~~~~-~~~~~  304 (318)
                      +.|++|.++. +++|.
T Consensus       382 ~~i~v~~~~~~~~~~~  397 (450)
T 2vdu_B          382 NFAKFIEYNLNENSFV  397 (450)
T ss_dssp             CSEEEEEEETTTTEEE
T ss_pred             cceEEEEEEcCCCeEE
Confidence            5689999876 45664

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.98  E-value=4.5e-29  Score=219.03  Aligned_cols=245  Identities=22%  Similarity=0.379  Sum_probs=189.5

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe--cccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL--KGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +++|+||+++ +||+| .|++|+|||++           +++++..+  .+|...|++++|++  ++++||||+.||+|+
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~-----------tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l~sgs~Dg~v~   92 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSAS-----------SGDILQLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQ   92 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETT-----------TCCEEEEEECCSTTCCEEEEEECT--TSSEEEEEETTSEEE
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECC-----------CCCEEEEEEecCCCCeEEEEEECC--CCCEEEEEECCCcEE
Confidence            5679999886 66665 59999999987           34555544  57889999999974  589999999999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +||+.+++.  ...+.+|...+.++++.+    .++++++.++.+++|+.....  .....+.+|...+..+.++++   
T Consensus        93 iw~~~~~~~--~~~~~~h~~~~~~~~~~~----~~l~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---  161 (318)
T 4ggc_A           93 LWDVQQQKR--LRNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAE--HHVATLSGHSQEVCGLRWAPD---  161 (318)
T ss_dssp             EEETTTTEE--EEEEECCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTT---
T ss_pred             EeecCCcee--EEEecCccceEEEeecCC----CEEEEEecCCceEeeecCCCc--eeEEEEcCccCceEEEEEcCC---
Confidence            999998864  445678999998877664    479999999999999864332  234456689999999999886   


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeE--EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW--IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                    +.+|++++.|++|+|||+.+++.  ........|...|.++.++|... ..-.+++++.|++|++|
T Consensus       162 --------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~i~lw  226 (318)
T 4ggc_A          162 --------------GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIW  226 (318)
T ss_dssp             --------------SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST-TEEEEEECTTTCEEEEE
T ss_pred             --------------CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC-cEEEEEecCCCCEEEEE
Confidence                          46899999999999999876431  12334567888899999999721 12234677889999999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe--CCCeEEEEEECCCCceE
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC--GDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~--~D~~v~iW~~~~~~~~~  304 (318)
                      +.....   ......+...+..+.|+|+++.+++++  .|++|+|||+..+....
T Consensus       227 d~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~  278 (318)
T 4ggc_A          227 NVCSGA---CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA  278 (318)
T ss_dssp             ETTTCC---EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred             eccccc---ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE
Confidence            987654   233345667899999999999988765  79999999987764433

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.9e-30  Score=238.86  Aligned_cols=233  Identities=12%  Similarity=0.124  Sum_probs=179.6

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc-----CeEEEEecCCCCCcEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG-----PVWQVAWAHPQFGTLL   83 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~~~~~~~~~l   83 (318)
                      ..+|.+.|.+++|||+|++||+++.||+|+|||.+             .++..+. |..     .|.+++|++  +|++|
T Consensus        81 ~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-------------~~l~~l~-~~~~~~~~sv~svafSP--DG~~L  144 (588)
T 2j04_A           81 NSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-------------KMLTNLD-SKGNLSSRTYHCFEWNP--IESSI  144 (588)
T ss_dssp             TTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT-------------EEEEECC-CSSCSTTTCEEEEEECS--SSSCE
T ss_pred             ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC-------------ceeeecc-CCCccccccEEEEEEcC--CCCEE
Confidence            33778999999999999999999999999999964             2677777 776     499999974  59999


Q ss_pred             EEEECCCeEEEEeCCCCcE-----EEEEEe----cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          84 ASCSYDRKVIIWRGDNGNW-----FKYYEY----NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~-----~~~~~~----~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      |+|+.||+|+|||+..+..     ....++    .+|...|.+|+|+|+  +  +++++.|++|++|+...+........
T Consensus       145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd--g--Laass~D~tVrlWd~~~~~~~~~~~t  220 (588)
T 2j04_A          145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED--V--LVAALSNNSVFSMTVSASSHQPVSRM  220 (588)
T ss_dssp             EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT--E--EEEEETTCCEEEECCCSSSSCCCEEE
T ss_pred             EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC--c--EEEEeCCCeEEEEECCCCccccceee
Confidence            9999999999999987642     123344    568889999999998  5  77889999999999744331101233


Q ss_pred             ec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEE--ccC
Q psy2762         155 IA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW--APS  231 (318)
Q Consensus       155 ~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~--sp~  231 (318)
                      +. +|...|.+++|+ +                  +.||+++ +++|++||..+++.. ... .+|.+.|.++.|  +|+
T Consensus       221 L~~~h~~~V~svaFs-g------------------~~LASa~-~~tIkLWd~~~~~~~-~~~-~gh~~~V~~va~~~s~d  278 (588)
T 2j04_A          221 IQNASRRKITDLKIV-D------------------YKVVLTC-PGYVHKIDLKNYSIS-SLK-TGSLENFHIIPLNHEKE  278 (588)
T ss_dssp             EECCCSSCCCCEEEE-T------------------TEEEEEC-SSEEEEEETTTTEEE-EEE-CSCCSCCCEEEETTCSS
T ss_pred             ecccccCcEEEEEEE-C------------------CEEEEEe-CCeEEEEECCCCeEE-EEE-cCCCceEEEEEeeeCCC
Confidence            53 788899999998 3                  4788887 699999999887542 222 389999999999  986


Q ss_pred             CCCCccEEEEEeCCCeEEEEEcCCCc----------------cee----eEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         232 WGLSKCMIASCSQDRKVIIWTSNDYV----------------TWT----PFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       232 ~~~~~~~l~s~s~D~~i~vw~~~~~~----------------~~~----~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                          +..|+++++||+ ++|......                .|.    +.........|++|+|||||+.||+++.
T Consensus       279 ----~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~  350 (588)
T 2j04_A          279 ----STILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD  350 (588)
T ss_dssp             ----CEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred             ----CCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence                789999999999 999864211                000    0000011235999999999999999873

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.97  E-value=5.8e-29  Score=225.43  Aligned_cols=262  Identities=16%  Similarity=0.158  Sum_probs=166.7

Q ss_pred             CCCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC-CCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ-FGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~~~~las~s   87 (318)
                      .+|...|++++|+| ++.+|++++.|++|++||+..           +..+..+. |...+.++.|.+.. ++.+|++++
T Consensus        96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  163 (408)
T 4a11_B           96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-----------LQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT  163 (408)
T ss_dssp             TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT-----------TEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEE
T ss_pred             ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC-----------Cccceecc-CCCceeeeEeecCCCCCcEEEEEc
Confidence            47999999999999 788999999999999999973           34555554 78889999996421 355999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc-------------eee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE-------------SRK  154 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~-------------~~~  154 (318)
                      .|+.|++||+.++..  ...+..|...|.+++|+|+. ..++++++.|+.|++||+........             ...
T Consensus       164 ~~~~v~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  240 (408)
T 4a11_B          164 RGPKVQLCDLKSGSC--SHILQGHRQEILAVSWSPRY-DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA  240 (408)
T ss_dssp             SSSSEEEEESSSSCC--CEEECCCCSCEEEEEECSSC-TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred             CCCeEEEEeCCCcce--eeeecCCCCcEEEEEECCCC-CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence            999999999987764  33566899999999999984 33689999999999999854431110             011


Q ss_pred             ecccccccceeeeCCCCCCCc---------cccccCCC---------------------CCCccceEEEecCCCeEEEEE
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLS---------ELDLKGSK---------------------LGGVAKRLVSGGCDNLIKIWK  204 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~---------~~~~~~~~---------------------~~~~~~~lasgs~d~~i~iwd  204 (318)
                      ...|...+..++|+|+...+.         ..++....                     .......++.++.|+.|++||
T Consensus       241 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d  320 (408)
T 4a11_B          241 NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYT  320 (408)
T ss_dssp             SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEE
T ss_pred             cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEE
Confidence            146888899999999742111         11111000                     001123456666677777777


Q ss_pred             ccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEE
Q psy2762         205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDIL  283 (318)
Q Consensus       205 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l  283 (318)
                      +.+++.  ...+.+|...|++++|+|+    +.+|++++.|+.|++|++.....     +...........+.| +...+
T Consensus       321 ~~~~~~--~~~~~~~~~~v~~~~~s~~----~~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  389 (408)
T 4a11_B          321 VYSGEQ--ITMLKGHYKTVDCCVFQSN----FQELYSGSRDCNILAWVPSLYEP-----VPDDDETTTKSQLNPAFEDAW  389 (408)
T ss_dssp             TTTCCE--EEEECCCSSCEEEEEEETT----TTEEEEEETTSCEEEEEECC-----------------------------
T ss_pred             CcCCcc--eeeeccCCCeEEEEEEcCC----CCEEEEECCCCeEEEEeCCCCCc-----cCCCCceEeccccccccceee
Confidence            666543  4567899999999999996    78999999999999999987532     111111112233444 33445


Q ss_pred             EEEeCCCeEEEEEE
Q psy2762         284 TVSCGDNSVSLWKE  297 (318)
Q Consensus       284 ~s~~~D~~v~iW~~  297 (318)
                      .+.+.|+.+++|+.
T Consensus       390 ~~~~~~~~~~~W~~  403 (408)
T 4a11_B          390 SSSDEEGGTSAWSH  403 (408)
T ss_dssp             --------------
T ss_pred             cccCccCceeecCC
Confidence            56778999999974

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=8e-29  Score=218.88  Aligned_cols=230  Identities=20%  Similarity=0.318  Sum_probs=175.0

Q ss_pred             ecCCCcceeeeeeecC--CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           8 VDTGHEDMIHDAEMDY--LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~--~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ...+|...|++++|+|  ++++|++|+.|++|+|||+.....  .......+.+..+.+|.+.|.+++|++...+.+|++
T Consensus        52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~  129 (351)
T 3f3f_A           52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE--ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC  129 (351)
T ss_dssp             EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC--TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred             eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc--cccccCcceeeeecccCCceeEEEEcCCCCCcEEEE
Confidence            4468999999999999  699999999999999999973211  001112256788999999999999964212889999


Q ss_pred             EECCCeEEEEeCCCCcEEEEEE-----------ecCCCcCeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          86 CSYDRKVIIWRGDNGNWFKYYE-----------YNNHDSSVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~~~-----------~~~h~~~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                      ++.|++|++||+.+++....+.           ...|...+.+++|+|+. .+.++++++.|+.+.+|+..... .....
T Consensus       130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~  208 (351)
T 3f3f_A          130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAA  208 (351)
T ss_dssp             EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEE
T ss_pred             ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeee
Confidence            9999999999987654211110           12577889999999962 14689999999998776543221 11234


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-------------------------
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-------------------------  208 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-------------------------  208 (318)
                      .+.+|...|.+++|+|+....             ..+|++|+.|+.|++||+..+                         
T Consensus       209 ~~~~h~~~i~~~~~~p~~~~~-------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (351)
T 3f3f_A          209 KLPGHKSLIRSISWAPSIGRW-------------YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMD  275 (351)
T ss_dssp             ECCCCCSCEEEEEECCCSSCS-------------SEEEEEEETTSCEEEEEEEECC------------------------
T ss_pred             ecCCCCcceeEEEECCCCCCc-------------ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccc
Confidence            556899999999999973100             168999999999999998753                         


Q ss_pred             -------------------eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         209 -------------------KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       209 -------------------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                                         .......+.+|...|++++|+|+    +.+|++++.|+.|+||++....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~----~~~l~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          276 AQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT----GTILSSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             ---------------CCSEEEEEEEEECTTSSCEEEEEECSS----SCCEEEEETTSCEEEEEECTTS
T ss_pred             cccccccccceeeeecccccccEEEEEecccccEEEEEEcCC----CCEEEEecCCCcEEEEecCcCc
Confidence                               12345667899999999999996    7899999999999999998754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.6e-29  Score=244.84  Aligned_cols=224  Identities=21%  Similarity=0.338  Sum_probs=178.8

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      +..+.+|.+.|++++|++  ++++|++|+.||+|+|||+.++.......+.+|...|.+++|+|+..+.++++|+.||.|
T Consensus         2 ~~~l~gH~~~V~~l~~s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I   79 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV   79 (753)
T ss_dssp             ------CCCCEEEECCCS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred             eeecccCcceeEEEEECC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence            346789999999999974  589999999999999999886555566678899999999999987556789999999999


Q ss_pred             EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762         139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~  218 (318)
                      ++|++..+.. .....+.+|..+|.+++|+|+.               .+.+|++|+.||.|++||+..+.......+.+
T Consensus        80 ~vwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~---------------~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~  143 (753)
T 3jro_A           80 LIWKEENGRW-SQIAVHAVHSASVNSVQWAPHE---------------YGPLLLVASSDGKVSVVEFKENGTTSPIIIDA  143 (753)
T ss_dssp             EEEEEETTEE-EEEEEECCCSSCEEEEEECCGG---------------GCSEEEEEETTSEEEEEECCSSSCCCCEEEEC
T ss_pred             EEEECCCCcc-cccccccCCCCCeEEEEECCCC---------------CCCEEEEEeCCCcEEEEEeecCCCcceeEeec
Confidence            9999865421 1234456799999999999962               03589999999999999988764334456678


Q ss_pred             CCCCeeEEEEccCC---------CCCccEEEEEeCCCeEEEEEcCCCcc--eeeEEeeecCCcEEEEEEcCC---CCEEE
Q psy2762         219 HSDWVRDVAWAPSW---------GLSKCMIASCSQDRKVIIWTSNDYVT--WTPFIMNTFDDVVWNVSWSLT---GDILT  284 (318)
Q Consensus       219 h~~~V~~v~~sp~~---------~~~~~~l~s~s~D~~i~vw~~~~~~~--~~~~~~~~~~~~v~~v~~spd---g~~l~  284 (318)
                      |...|.++.|+|..         ..++.+|++++.|++|++||+.....  .....+..|...|.+++|+|+   |++|+
T Consensus       144 ~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~  223 (753)
T 3jro_A          144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA  223 (753)
T ss_dssp             CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred             CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEE
Confidence            99999999999931         00267899999999999999876532  122345678899999999999   99999


Q ss_pred             EEeCCCeEEEEEECCC
Q psy2762         285 VSCGDNSVSLWKENTD  300 (318)
Q Consensus       285 s~~~D~~v~iW~~~~~  300 (318)
                      +++.||+|++|+...+
T Consensus       224 s~s~Dg~I~iwd~~~~  239 (753)
T 3jro_A          224 SVSQDRTCIIWTQDNE  239 (753)
T ss_dssp             EEESSSCEEEEEESSS
T ss_pred             EEecCCEEEEecCCCC
Confidence            9999999999998875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=1.6e-28  Score=223.75  Aligned_cols=268  Identities=12%  Similarity=0.052  Sum_probs=169.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC--------------
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH--------------   76 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~--------------   76 (318)
                      .+...+.-+..+|++..|++++.|+.|++|+....... .........+.. ..|...+..+.|.+              
T Consensus        16 ~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (393)
T 4gq1_A           16 VRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTP-GSTGLTLQELFT-IQTGLPTLHLSFSSSCSYSENLHDGDGN   93 (393)
T ss_dssp             CCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSS-SCCSEEEEEEEE-EECSSCEEEEEECTTCEEECC-------
T ss_pred             CCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcc-cccccceeeeEE-EecCCCeeeEeecCCccccccccCCCcc
Confidence            34444444444566655666677999999987421100 000000011111 12333444444431              


Q ss_pred             ----CCCCcEEEEEECCCeEEEEeCCCCcEEE---EEEecCCCcCeEEEEeeCCC------CCcEEEEeecCCeEEEEEe
Q psy2762          77 ----PQFGTLLASCSYDRKVIIWRGDNGNWFK---YYEYNNHDSSVNSIAWAPKE------FGLILACGSSDGTISFLTY  143 (318)
Q Consensus        77 ----~~~~~~las~s~Dg~v~vWd~~~~~~~~---~~~~~~h~~~v~~v~~~p~~------~~~~lasgs~d~~i~i~~~  143 (318)
                          +.++.+||+++.|++|+|||...+....   ...+.+|...|++|+|+|..      .+.+||+++.|++|+|||+
T Consensus        94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~  173 (393)
T 4gq1_A           94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL  173 (393)
T ss_dssp             ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred             eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence                2246789999999999999998775432   22357899999999999810      1679999999999999998


Q ss_pred             ecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE----------
Q psy2762         144 MSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE----------  213 (318)
Q Consensus       144 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~----------  213 (318)
                      ....   ....+..|..++.+++|+|+.                ..+|++|+.|++|++||+.+++....          
T Consensus       174 ~~~~---~~~~~~~~~~~v~~v~~~p~~----------------~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~  234 (393)
T 4gq1_A          174 TDEG---PILAGYPLSSPGISVQFRPSN----------------PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP  234 (393)
T ss_dssp             ETTE---EEEEEEECSSCEEEEEEETTE----------------EEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred             CCCc---eeeeecCCCCCcEEEEECCCC----------------CceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence            6543   344566888999999999963                35799999999999999876532111          


Q ss_pred             -------------EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE------
Q psy2762         214 -------------TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV------  274 (318)
Q Consensus       214 -------------~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v------  274 (318)
                                   ....+|...|.++.|++.   ++..|++++.|+++++||+.....  ...+..+...+..+      
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~---dg~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~~~~~~~~~~~  309 (393)
T 4gq1_A          235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGS---DGSGILAMCKSGAWLRWNLFANND--YNEISDSTMKLGPKNLLPNV  309 (393)
T ss_dssp             CSEEEESGGGC------CCSSSCSEEEEETT---TTCEEEEECTTSEEEEEEC---------------------CCSCSE
T ss_pred             eEEecccccceeeeecccccccceeeeeecC---CCCEEEEEeCCCCEEEEECccCCC--CceEeeecCccccEEEcccc
Confidence                         122578888999999842   588999999999999999865431  11122222222222      


Q ss_pred             ------------EEcC--CCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         275 ------------SWSL--TGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       275 ------------~~sp--dg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                                  .|+|  ++.++++++.||+|+|||...+....
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~  353 (393)
T 4gq1_A          310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS  353 (393)
T ss_dssp             EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred             ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence                        3333  44567788899999999987765443

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=2.1e-28  Score=218.49  Aligned_cols=221  Identities=17%  Similarity=0.227  Sum_probs=166.0

Q ss_pred             ceEEEEecccccCeEEEEecCCCC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      .+.+..+.+|.+.|++++|++ ..  |++|++|+.||.|+|||+.+........+.+|...|.+++|+|+  +.++++++
T Consensus        29 ~~~~~~~~~h~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~  105 (368)
T 3mmy_A           29 MKDIEVTSSPDDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTAS  105 (368)
T ss_dssp             TCCEECSSCCSSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEE
T ss_pred             cceeEeccCCCCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEc
Confidence            345778899999999999974 33  69999999999999999987332333456789999999999998  67899999


Q ss_pred             cCCeEEEEEeecCCCCcceeeecccccccceeee--CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         134 SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW--GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      .|+.|++|++...    ....+..|..++.++.|  +|+                 +.+|++++.|+.|++||+.+++..
T Consensus       106 ~dg~v~iwd~~~~----~~~~~~~~~~~v~~~~~~~~~~-----------------~~~l~~~~~dg~i~vwd~~~~~~~  164 (368)
T 3mmy_A          106 CDKTAKMWDLSSN----QAIQIAQHDAPVKTIHWIKAPN-----------------YSCVMTGSWDKTLKFWDTRSSNPM  164 (368)
T ss_dssp             TTSEEEEEETTTT----EEEEEEECSSCEEEEEEEECSS-----------------CEEEEEEETTSEEEEECSSCSSCS
T ss_pred             CCCcEEEEEcCCC----CceeeccccCceEEEEEEeCCC-----------------CCEEEEccCCCcEEEEECCCCcEE
Confidence            9999999997433    23445689999999999  665                 467889999999999987765432


Q ss_pred             EEEEc---------------------------------------ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         212 EETKL---------------------------------------ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       212 ~~~~~---------------------------------------~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      .....                                       ..+...+.++++.+........+++++.|+.|++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~  244 (368)
T 3mmy_A          165 MVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHY  244 (368)
T ss_dssp             EEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEE
T ss_pred             EEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEe
Confidence            21111                                       112233555555554322334599999999999999


Q ss_pred             cCCCcc-eeeEEeeecCC------------cEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         253 SNDYVT-WTPFIMNTFDD------------VVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       253 ~~~~~~-~~~~~~~~~~~------------~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ...... .....+..|..            .|.+++|+|+|++|++++.||.|+|||+..+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~  305 (368)
T 3mmy_A          245 INPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR  305 (368)
T ss_dssp             SSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred             cCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence            987532 11223334433            7999999999999999999999999998765

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.4e-28  Score=219.78  Aligned_cols=246  Identities=11%  Similarity=0.058  Sum_probs=179.3

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      ...|.++.|+|+   +++++.|++|++|+........+  ...+..+..+. +|.+.|.+++|++..++++|++++.|++
T Consensus        76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~  150 (343)
T 3lrv_A           76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILD--SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT  150 (343)
T ss_dssp             EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEE--TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC
T ss_pred             cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEee--cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc
Confidence            357888889888   99999999999998752110000  11233344444 7789999999964225899999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-cccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-HTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~  170 (318)
                      |++||+.+++..... ...|...|.+++|+|+  +.++++|+.|+.|++||+.....  ....+.. |..+|.+++|+|+
T Consensus       151 i~~wd~~~~~~~~~~-~~~~~~~i~~~~~~pd--g~~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l~fs~~  225 (343)
T 3lrv_A          151 IGFQSYEDDSQYIVH-SAKSDVEYSSGVLHKD--SLLLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEVKFADN  225 (343)
T ss_dssp             EEEEESSSSCEEEEE-CCCSSCCCCEEEECTT--SCEEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEEEECTT
T ss_pred             EEEEECCCCcEEEEE-ecCCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEEEEeCC
Confidence            999999988753332 1345668999999998  78999999999999999865542  1134555 9999999999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE-EEEcccCCCCee--EEEEccCCCCCccEEEEEeC-CC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKLENHSDWVR--DVAWAPSWGLSKCMIASCSQ-DR  246 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~-~~~~~~h~~~V~--~v~~sp~~~~~~~~l~s~s~-D~  246 (318)
                                       +.+|++++. ++|+|||+++.+... ...+..|...+.  +++|+|+    +.+|++++. |+
T Consensus       226 -----------------g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~l~~~s~~d~  283 (343)
T 3lrv_A          226 -----------------GYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS----GKNMIAYSNESN  283 (343)
T ss_dssp             -----------------SSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT----SSEEEEEETTTT
T ss_pred             -----------------CCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCC----CCEEEEecCCCC
Confidence                             478999995 499999988764321 112223444454  6999996    889999998 99


Q ss_pred             eEEEEEcCCCcc-eeeEEeeecCCcEEEEEEcC---CCCEEEEEeCCCeEEEEEE
Q psy2762         247 KVIIWTSNDYVT-WTPFIMNTFDDVVWNVSWSL---TGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       247 ~i~vw~~~~~~~-~~~~~~~~~~~~v~~v~~sp---dg~~l~s~~~D~~v~iW~~  297 (318)
                      .|+||+...... |..       .++..+.|+|   +++.|++++.|+.++++-.
T Consensus       284 ~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          284 SLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             EEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEe
Confidence            999999865431 211       4677899999   8999999999999999853

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.3e-27  Score=213.35  Aligned_cols=217  Identities=18%  Similarity=0.190  Sum_probs=176.0

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      .....+.+|.+.|++++|++  ++++|++++.||.|++||+.+++.  ...+.+|...|.+++|+|+  +.++++++.|+
T Consensus        23 ~~~~~l~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg   96 (369)
T 3zwl_B           23 MKAIKLTGHERPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGER--LGTLDGHTGTIWSIDVDCF--TKYCVTGSADY   96 (369)
T ss_dssp             EEEEEEECCSSCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCE--EEEECCCSSCEEEEEECTT--SSEEEEEETTT
T ss_pred             cccEEEEEeeceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchh--hhhhhhcCCcEEEEEEcCC--CCEEEEEeCCC
Confidence            34567899999999999974  589999999999999999988764  4456789999999999998  67899999999


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeE-
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKW-  210 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~-  210 (318)
                      .|++|++....    ......|..++..+.|+|+                 +.+|++++.+     +.|++||+..... 
T Consensus        97 ~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~~~~~~~g~i~~~d~~~~~~~  155 (369)
T 3zwl_B           97 SIKLWDVSNGQ----CVATWKSPVPVKRVEFSPC-----------------GNYFLAILDNVMKNPGSINIYEIERDSAT  155 (369)
T ss_dssp             EEEEEETTTCC----EEEEEECSSCEEEEEECTT-----------------SSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred             eEEEEECCCCc----EEEEeecCCCeEEEEEccC-----------------CCEEEEecCCccCCCCEEEEEEecCCccc
Confidence            99999975433    2222237788999999997                 4689999998     9999999765421 


Q ss_pred             --------EEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCC
Q psy2762         211 --------IEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       211 --------~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg  280 (318)
                              .....+..|..  .+.+++|+|+    +.+|++++.|+.|++||+.... .....+..|...|.+++|+|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~  230 (369)
T 3zwl_B          156 HELTKVSEEPIHKIITHEGLDAATVAGWSTK----GKYIIAGHKDGKISKYDVSNNY-EYVDSIDLHEKSISDMQFSPDL  230 (369)
T ss_dssp             CCEEEECSSCSEEEECCTTCCCEEEEEECGG----GCEEEEEETTSEEEEEETTTTT-EEEEEEECCSSCEEEEEECTTS
T ss_pred             eeecccccceeeeccCCcCccceeEEEEcCC----CCEEEEEcCCCEEEEEECCCCc-EeEEEEecCCCceeEEEECCCC
Confidence                    01223445655  8999999996    8899999999999999998632 2334556788999999999999


Q ss_pred             CEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         281 DILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       281 ~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      ++|++++.|+.|++||+..+.....
T Consensus       231 ~~l~~~~~d~~i~v~d~~~~~~~~~  255 (369)
T 3zwl_B          231 TYFITSSRDTNSFLVDVSTLQVLKK  255 (369)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CEEEEecCCceEEEEECCCCceeee
Confidence            9999999999999999877644433

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=1.1e-28  Score=227.23  Aligned_cols=264  Identities=18%  Similarity=0.253  Sum_probs=193.9

Q ss_pred             eeeeeeecCCC----------CEEEEeeC----CCcEEEEEcCCCcC--C-----CCCC--------CCcceE-EEEecc
Q psy2762          15 MIHDAEMDYLG----------LYLATCSS----DHTVKVFNLDRNLK--K-----DDSH--------SQKGTL-IAELKG   64 (318)
Q Consensus        15 ~v~~~~~~~~g----------~~l~s~s~----D~~v~vwd~~~~~~--~-----~~~~--------~~~~~~-~~~~~~   64 (318)
                      +..++.|.|+.          .+|+.|+.    .+.|.|+++.-+..  .     .+.+        ...+++ ......
T Consensus        47 p~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  126 (430)
T 2xyi_A           47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKIN  126 (430)
T ss_dssp             CCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEEE
T ss_pred             CceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEEc
Confidence            45777777765          46777764    45678886531100  0     0000        112222 355668


Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC--------CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN--------GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~--------~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      |.+.|++++|++ ..+.+||+++.||.|++||+..        +.......+.+|...|.+++|+|+. ..+|++|+.||
T Consensus       127 h~~~v~~l~~~p-~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg  204 (430)
T 2xyi_A          127 HEGEVNRARYMP-QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL-NGYLLSASDDH  204 (430)
T ss_dssp             ESSCCSEEEEET-TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS-TTEEEEECTTS
T ss_pred             CCCcEEEEEECC-CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC-CCeEEEEeCCC
Confidence            999999999974 3478999999999999999875        1123445567899999999999984 22899999999


Q ss_pred             eEEEEEeecCCCCcc----eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe-EE
Q psy2762         137 TISFLTYMSDTNSWE----SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK-WI  211 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~-~~  211 (318)
                      .|++|++........    ...+.+|...+.+++|+|..                ...|++++.|+.|++||++.+. ..
T Consensus       205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~----------------~~~l~s~~~dg~i~i~d~~~~~~~~  268 (430)
T 2xyi_A          205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH----------------ESLFGSVADDQKLMIWDTRNNNTSK  268 (430)
T ss_dssp             CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC----------------TTEEEEEETTSEEEEEETTCSCSSS
T ss_pred             eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC----------------CCEEEEEeCCCeEEEEECCCCCCCc
Confidence            999999855321111    23345788999999999942                3689999999999999988652 11


Q ss_pred             EEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEeCCC
Q psy2762         212 EETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSCGDN  290 (318)
Q Consensus       212 ~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~~D~  290 (318)
                      ....+..|...|++++|+|+   ...+|++++.|++|++||+..... ....+..|...|.+++|+|+++ +|++++.|+
T Consensus       269 ~~~~~~~~~~~v~~i~~~p~---~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~  344 (430)
T 2xyi_A          269 PSHTVDAHTAEVNCLSFNPY---SEFILATGSADKTVALWDLRNLKL-KLHSFESHKDEIFQVQWSPHNETILASSGTDR  344 (430)
T ss_dssp             CSEEEECCSSCEEEEEECSS---CTTEEEEEETTSEEEEEETTCTTS-CSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred             ceeEeecCCCCeEEEEeCCC---CCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence            23455689999999999996   345799999999999999986432 2345667889999999999995 699999999


Q ss_pred             eEEEEEECCC
Q psy2762         291 SVSLWKENTD  300 (318)
Q Consensus       291 ~v~iW~~~~~  300 (318)
                      .|+||++...
T Consensus       345 ~i~iwd~~~~  354 (430)
T 2xyi_A          345 RLHVWDLSKI  354 (430)
T ss_dssp             CCEEEEGGGT
T ss_pred             cEEEEeCCCC
Confidence            9999998763

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=2e-26  Score=211.28  Aligned_cols=241  Identities=11%  Similarity=0.059  Sum_probs=187.2

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEEC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~   88 (318)
                      .+|.+.|.+++|+|+++++++++.|++|++||+.           .++.+..+..|...+.+++|++  +++++ ++++.
T Consensus       166 ~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~  232 (433)
T 3bws_A          166 KKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-----------TLAYKATVDLTGKWSKILLYDP--IRDLVYCSNWI  232 (433)
T ss_dssp             HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----------TCCEEEEEECSSSSEEEEEEET--TTTEEEEEETT
T ss_pred             cccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-----------CceEEEEEcCCCCCeeEEEEcC--CCCEEEEEecC
Confidence            4899999999999999999999999999999986           3456778889999999999974  46666 55558


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee--------cCCeEEEEEeecCCCCcceeeeccccc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS--------SDGTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs--------~d~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      |+.|++||+.+++..  ..+.. ...+.+++|+|+  +.++++++        .|+.|++||+...    +......|..
T Consensus       233 ~~~i~~~d~~~~~~~--~~~~~-~~~~~~~~~~~~--g~~l~~~~~~~~~~~~~dg~i~~~d~~~~----~~~~~~~~~~  303 (433)
T 3bws_A          233 SEDISVIDRKTKLEI--RKTDK-IGLPRGLLLSKD--GKELYIAQFSASNQESGGGRLGIYSMDKE----KLIDTIGPPG  303 (433)
T ss_dssp             TTEEEEEETTTTEEE--EECCC-CSEEEEEEECTT--SSEEEEEEEESCTTCSCCEEEEEEETTTT----EEEEEEEEEE
T ss_pred             CCcEEEEECCCCcEE--EEecC-CCCceEEEEcCC--CCEEEEEECCCCccccCCCeEEEEECCCC----cEEeeccCCC
Confidence            999999999877543  33443 455899999998  55676666        4889999997433    2233335566


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .+..++|+|+.                ...+++++.|+.|++||+.+++...  .+ .+...+.+++|+|+    +.+|+
T Consensus       304 ~~~~~~~~~~g----------------~~l~~~~~~~~~v~v~d~~~~~~~~--~~-~~~~~~~~~~~s~d----g~~l~  360 (433)
T 3bws_A          304 NKRHIVSGNTE----------------NKIYVSDMCCSKIEVYDLKEKKVQK--SI-PVFDKPNTIALSPD----GKYLY  360 (433)
T ss_dssp             CEEEEEECSST----------------TEEEEEETTTTEEEEEETTTTEEEE--EE-ECSSSEEEEEECTT----SSEEE
T ss_pred             CcceEEECCCC----------------CEEEEEecCCCEEEEEECCCCcEEE--Ee-cCCCCCCeEEEcCC----CCEEE
Confidence            77889999963                1356788999999999998876543  33 36677999999996    77777


Q ss_pred             EEeC---------------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC-CCeEEEEEEC
Q psy2762         241 SCSQ---------------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKEN  298 (318)
Q Consensus       241 s~s~---------------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~  298 (318)
                      +++.               ||.|++||..+...  ...+ .....+.+++|+|||++|++++. |++|++|+++
T Consensus       361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~  431 (433)
T 3bws_A          361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV--KEFW-EAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD  431 (433)
T ss_dssp             EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE--EEEE-ECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred             EEecCCCccccccccccccceEEEEEECCCCcE--EEEe-cCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence            7776               57999999876431  2222 23567899999999999998875 9999999976

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=1.5e-25  Score=202.82  Aligned_cols=241  Identities=11%  Similarity=0.046  Sum_probs=179.4

Q ss_pred             CCCcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-EEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-SCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-s~s   87 (318)
                      .+|. .+.+++|+|+|++| ++++.|++|++||+.           .++.+..+..|. .|.+++|++  ++++|+ +++
T Consensus        29 ~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-----------~~~~~~~~~~~~-~v~~~~~sp--dg~~l~~~~~   93 (391)
T 1l0q_A           29 PVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTA-----------TNNVIATVPAGS-SPQGVAVSP--DGKQVYVTNM   93 (391)
T ss_dssp             ECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETT-----------TTEEEEEEECSS-SEEEEEECT--TSSEEEEEET
T ss_pred             ecCC-CcceEEECCCCCEEEEECCCCCeEEEEECC-----------CCeEEEEEECCC-CccceEECC--CCCEEEEEEC
Confidence            4454 58999999999987 677799999999986           356677776655 899999974  477665 555


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      .|++|++||+.+++....  +. +...+.+++|+|++ ..++++++.|+.|.+||.....   ....+..| ..+..++|
T Consensus        94 ~~~~v~v~d~~~~~~~~~--~~-~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~-~~~~~~~~  165 (391)
T 1l0q_A           94 ASSTLSVIDTTSNTVAGT--VK-TGKSPLGLALSPDG-KKLYVTNNGDKTVSVINTVTKA---VINTVSVG-RSPKGIAV  165 (391)
T ss_dssp             TTTEEEEEETTTTEEEEE--EE-CSSSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE---EEEEEECC-SSEEEEEE
T ss_pred             CCCEEEEEECCCCeEEEE--Ee-CCCCcceEEECCCC-CEEEEEeCCCCEEEEEECCCCc---EEEEEecC-CCcceEEE
Confidence            679999999998764433  33 34578999999983 2344788889999999974332   12223333 45688999


Q ss_pred             CCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe---
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS---  243 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s---  243 (318)
                      +|+                 +.+| ++++.|+.|++||+.+++.....   .+...+.+++|+|+    +.+|++++   
T Consensus       166 ~~d-----------------g~~l~~~~~~~~~v~~~d~~~~~~~~~~---~~~~~~~~~~~~~~----g~~l~~~~~~~  221 (391)
T 1l0q_A          166 TPD-----------------GTKVYVANFDSMSISVIDTVTNSVIDTV---KVEAAPSGIAVNPE----GTKAYVTNVDK  221 (391)
T ss_dssp             CTT-----------------SSEEEEEETTTTEEEEEETTTTEEEEEE---ECSSEEEEEEECTT----SSEEEEEEECS
T ss_pred             CCC-----------------CCEEEEEeCCCCEEEEEECCCCeEEEEE---ecCCCccceEECCC----CCEEEEEecCc
Confidence            997                 3444 78899999999999887654332   24567899999996    77777777   


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEE-EEEeCCCeEEEEEECCC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTD  300 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l-~s~~~D~~v~iW~~~~~  300 (318)
                      .|+.|++||+.....  ...+..+ ..+.+++|+|||++| ++++.|+.|++||...+
T Consensus       222 ~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~  276 (391)
T 1l0q_A          222 YFNTVSMIDTGTNKI--TARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN  276 (391)
T ss_dssp             SCCEEEEEETTTTEE--EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             CCCcEEEEECCCCeE--EEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence            799999999976532  2233333 457899999999987 56678999999998765

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=2.1e-26  Score=211.17  Aligned_cols=241  Identities=14%  Similarity=0.083  Sum_probs=184.6

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEE-----EecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA-----ELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-----~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+.+++|+|++.++++++.|++|++||+..           ++.+.     .+.+|.+.|++++|++  ++.++++++.
T Consensus       123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~  189 (433)
T 3bws_A          123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINS-----------GQTVRLSPPEKYKKKLGFVETISIPE--HNELWVSQMQ  189 (433)
T ss_dssp             SCBCCCEESSSSEEEEEBTTSSSEEEEETTT-----------CCEEEECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGG
T ss_pred             CCceEEEEeCCCeEEEEeCCCCeEEEEECCC-----------CeEeeecCcccccccCCceeEEEEcC--CCEEEEEECC
Confidence            3566899999888899999999999999863           34444     4568999999999953  5899999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |+.|++||+.+++...  .+..|...+.+++|+|++ ..++++++.|+.|.+||+....   ....+ .+...+..++|+
T Consensus       190 d~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~~~d~~~~~---~~~~~-~~~~~~~~~~~~  262 (433)
T 3bws_A          190 ANAVHVFDLKTLAYKA--TVDLTGKWSKILLYDPIR-DLVYCSNWISEDISVIDRKTKL---EIRKT-DKIGLPRGLLLS  262 (433)
T ss_dssp             GTEEEEEETTTCCEEE--EEECSSSSEEEEEEETTT-TEEEEEETTTTEEEEEETTTTE---EEEEC-CCCSEEEEEEEC
T ss_pred             CCEEEEEECCCceEEE--EEcCCCCCeeEEEEcCCC-CEEEEEecCCCcEEEEECCCCc---EEEEe-cCCCCceEEEEc
Confidence            9999999998876433  455788899999999984 3444666689999999974332   12222 233457889999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEec--------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGG--------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs--------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      |+                 +.+|++++        .|+.|++||+.+++....   ..|...+.+++|+|+   ...+++
T Consensus       263 ~~-----------------g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~---g~~l~~  319 (433)
T 3bws_A          263 KD-----------------GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNT---ENKIYV  319 (433)
T ss_dssp             TT-----------------SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSS---TTEEEE
T ss_pred             CC-----------------CCEEEEEECCCCccccCCCeEEEEECCCCcEEee---ccCCCCcceEEECCC---CCEEEE
Confidence            97                 45677777        588999999988765333   245557899999997   235678


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC---------------CCeEEEEEECCC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG---------------DNSVSLWKENTD  300 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~---------------D~~v~iW~~~~~  300 (318)
                      +++.|+.|++|+..+..   ......+...+.+++|+|+|++|++++.               ||.|++||...+
T Consensus       320 ~~~~~~~v~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~  391 (433)
T 3bws_A          320 SDMCCSKIEVYDLKEKK---VQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD  391 (433)
T ss_dssp             EETTTTEEEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred             EecCCCEEEEEECCCCc---EEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence            88999999999998643   1222246678999999999999998886               579999997664

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.95  E-value=2.6e-26  Score=206.28  Aligned_cols=226  Identities=13%  Similarity=0.123  Sum_probs=154.2

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      ..+.+++.|.+.|++++|++  +|++||+|+.|+ ++||+..+.....  ....  ..+..+++.++. +.++++++.|+
T Consensus        10 ~~~~~~~~h~~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~~--~~~~--~~~~~~~~~~~~-~~~~~~~~~d~   81 (355)
T 3vu4_A           10 NPIVPENHVSNPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHIM--SQEM--RHLSKVRMLHRT-NYVAFVTGVKE   81 (355)
T ss_dssp             ---------CCCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEEE--EEEC--SCCCEEEECTTS-SEEEEECSSTT
T ss_pred             CCccccccCCCceEEEEECC--CCCEEEEEcCCE-EEEEecCCcceee--eeec--CCeEEEEEcCCC-CEEEEEECCcc
Confidence            45667789999999999974  589999988765 7899987654322  2222  247778888863 44557788899


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCC------CCccccccCC--CCCC----c------cceEEE--ecC
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG------SLSELDLKGS--KLGG----V------AKRLVS--GGC  196 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~------~~~~~~~~~~--~~~~----~------~~~las--gs~  196 (318)
                      +|++||...+.   ....+ .|..++..+.|+++..      .+...++...  ....    .      ..++|.  |+.
T Consensus        82 ~v~iWd~~~~~---~~~~~-~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~  157 (355)
T 3vu4_A           82 VVHIWDDVKKQ---DVSRI-KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFN  157 (355)
T ss_dssp             EEEEEETTTTE---EEEEE-ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSC
T ss_pred             EEEEEECCCCc---EEEEE-ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCc
Confidence            99999974432   12222 3666788888887521      0111111111  0000    0      024444  799


Q ss_pred             CCeEEEEEccCCeE-------------EE-EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe-EEEEEcCCCcceee
Q psy2762         197 DNLIKIWKQEGDKW-------------IE-ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK-VIIWTSNDYVTWTP  261 (318)
Q Consensus       197 d~~i~iwd~~~~~~-------------~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~-i~vw~~~~~~~~~~  261 (318)
                      ||.|++||+.++..             .+ ...+.+|...|++++|+|+    +.+|++++.|++ |+|||+.+...  .
T Consensus       158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~----g~~l~s~s~d~~~v~iwd~~~~~~--~  231 (355)
T 3vu4_A          158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK----SDMVATCSQDGTIIRVFKTEDGVL--V  231 (355)
T ss_dssp             TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT----SSEEEEEETTCSEEEEEETTTCCE--E
T ss_pred             CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC----CCEEEEEeCCCCEEEEEECCCCcE--E
Confidence            99999999886430             11 4567899999999999996    889999999998 99999987542  3


Q ss_pred             EEee-e-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         262 FIMN-T-FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       262 ~~~~-~-~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      ..+. + |...|.+++|+|||++|++++.|++|+||+++..
T Consensus       232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~  272 (355)
T 3vu4_A          232 REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND  272 (355)
T ss_dssp             EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred             EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence            3444 4 8899999999999999999999999999998664

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.94  E-value=2.6e-24  Score=194.65  Aligned_cols=227  Identities=14%  Similarity=0.108  Sum_probs=170.8

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCCCCcEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGDNGNWFK  104 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~~~~~~~  104 (318)
                      .++++++.|++|++||+.           .++++..+..|. .+.+++|++  ++++| ++++.|++|++||+.+++...
T Consensus         3 ~l~vs~~~d~~v~v~d~~-----------~~~~~~~~~~~~-~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~   68 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVT-----------SNKVTATIPVGS-NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA   68 (391)
T ss_dssp             EEEEEETTTTEEEEEETT-----------TTEEEEEEECSS-SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EEEEEcCCCCEEEEEECC-----------CCeEEEEeecCC-CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEE
Confidence            467889999999999986           356777887775 489999974  47665 777799999999998876544


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      .  +..+ ..+.+++|+|++ ..++++++.++.|++||...+.    ......+...+..++|+|+              
T Consensus        69 ~--~~~~-~~v~~~~~spdg-~~l~~~~~~~~~v~v~d~~~~~----~~~~~~~~~~~~~~~~s~d--------------  126 (391)
T 1l0q_A           69 T--VPAG-SSPQGVAVSPDG-KQVYVTNMASSTLSVIDTTSNT----VAGTVKTGKSPLGLALSPD--------------  126 (391)
T ss_dssp             E--EECS-SSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE----EEEEEECSSSEEEEEECTT--------------
T ss_pred             E--EECC-CCccceEECCCC-CEEEEEECCCCEEEEEECCCCe----EEEEEeCCCCcceEEECCC--------------
Confidence            3  3333 489999999984 2344666678999999974332    2222234456788999997              


Q ss_pred             CCccceE-EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCCCcceeeE
Q psy2762         185 GGVAKRL-VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTWTPF  262 (318)
Q Consensus       185 ~~~~~~l-asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~~~~  262 (318)
                         +++| ++++.|+.|++||+.+++...  .+..| ..+.+++|+|+    +.+| ++++.|+.|++||+....   ..
T Consensus       127 ---g~~l~~~~~~~~~v~~~d~~~~~~~~--~~~~~-~~~~~~~~~~d----g~~l~~~~~~~~~v~~~d~~~~~---~~  193 (391)
T 1l0q_A          127 ---GKKLYVTNNGDKTVSVINTVTKAVIN--TVSVG-RSPKGIAVTPD----GTKVYVANFDSMSISVIDTVTNS---VI  193 (391)
T ss_dssp             ---SSEEEEEETTTTEEEEEETTTTEEEE--EEECC-SSEEEEEECTT----SSEEEEEETTTTEEEEEETTTTE---EE
T ss_pred             ---CCEEEEEeCCCCEEEEEECCCCcEEE--EEecC-CCcceEEECCC----CCEEEEEeCCCCEEEEEECCCCe---EE
Confidence               3445 789999999999998876543  34444 45799999996    5555 788899999999997753   22


Q ss_pred             EeeecCCcEEEEEEcCCCCEEEEEe---CCCeEEEEEECCCC
Q psy2762         263 IMNTFDDVVWNVSWSLTGDILTVSC---GDNSVSLWKENTDG  301 (318)
Q Consensus       263 ~~~~~~~~v~~v~~spdg~~l~s~~---~D~~v~iW~~~~~~  301 (318)
                      ....+...+..++|+|+|++|++++   .|+.|++||...+.
T Consensus       194 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~  235 (391)
T 1l0q_A          194 DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK  235 (391)
T ss_dssp             EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred             EEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence            2234566899999999999999888   68999999987653

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.93  E-value=1.8e-24  Score=198.52  Aligned_cols=239  Identities=13%  Similarity=0.137  Sum_probs=181.0

Q ss_pred             cCCCcceeeeeeecC--------------CCCEEEEeeCC------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccC
Q psy2762           9 DTGHEDMIHDAEMDY--------------LGLYLATCSSD------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP   68 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~--------------~g~~l~s~s~D------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~   68 (318)
                      ..+|...++.+++++              .+.+|+.++.+      ++|++||++.            .....+.+|.+.
T Consensus       113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g------------~~~~~l~~~~~~  180 (415)
T 2hqs_A          113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG------------YNQFVVHRSPQP  180 (415)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS------------CSCEEEEEESSC
T ss_pred             EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC------------CCCEEEeCCCCc
Confidence            467888888877765              26677776655      7999999862            224667789999


Q ss_pred             eEEEEecCCCCCcEEEEEECCC---eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCe--EEEEE
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDR---KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGT--ISFLT  142 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg---~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~--i~i~~  142 (318)
                      |.+++|++  +|++|++++.|+   .|++||+.+++..   .+..|...+.+++|+|+  +..++ +++.++.  |.+||
T Consensus       181 v~~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d  253 (415)
T 2hqs_A          181 LMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMD  253 (415)
T ss_dssp             EEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEE
T ss_pred             ceeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEE
Confidence            99999974  599999999986   9999999887643   34567888999999999  55555 6666665  77787


Q ss_pred             eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CC--eEEEEEccCCeEEEEEEcccC
Q psy2762         143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DN--LIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~--~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      ....    ....+..|...+..++|+|+                 +++|+.++. ++  .|++||+.+++.   ..+..|
T Consensus       254 ~~~~----~~~~l~~~~~~~~~~~~spd-----------------g~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~  309 (415)
T 2hqs_A          254 LASG----QIRQVTDGRSNNTEPTWFPD-----------------SQNLAFTSDQAGRPQVYKVNINGGAP---QRITWE  309 (415)
T ss_dssp             TTTC----CEEECCCCSSCEEEEEECTT-----------------SSEEEEEECTTSSCEEEEEETTSSCC---EECCCS
T ss_pred             CCCC----CEEeCcCCCCcccceEECCC-----------------CCEEEEEECCCCCcEEEEEECCCCCE---EEEecC
Confidence            6432    23556678788899999997                 467777775 45  577778877653   334567


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC---eEE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN---SVS  293 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~---~v~  293 (318)
                      ...+.+++|+|+    |.+|++++.+   ..|++|++.+...   ..+..+. .+.+++|+|||++|++++.|+   .|.
T Consensus       310 ~~~~~~~~~spd----G~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~  381 (415)
T 2hqs_A          310 GSQNQDADVSSD----GKFMVMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLN  381 (415)
T ss_dssp             SSEEEEEEECTT----SSEEEEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             CCcccCeEECCC----CCEEEEEECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEE
Confidence            778999999996    7888888765   6899999987542   3344443 789999999999999998877   788


Q ss_pred             EEEEC
Q psy2762         294 LWKEN  298 (318)
Q Consensus       294 iW~~~  298 (318)
                      +|+++
T Consensus       382 ~~d~~  386 (415)
T 2hqs_A          382 LVSTD  386 (415)
T ss_dssp             EEETT
T ss_pred             EEECC
Confidence            89865

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=7.3e-23  Score=181.07  Aligned_cols=270  Identities=12%  Similarity=0.110  Sum_probs=177.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCC-CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSD-HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-   88 (318)
                      .|...+..++|+|+|++|++++.+ +.|++|+++..       ......+..+..+. .+..++|++  ++++|++++. 
T Consensus        35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~s~--dg~~l~~~~~~  104 (343)
T 1ri6_A           35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD-------DGALTFAAESALPG-SLTHISTDH--QGQFVFVGSYN  104 (343)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT-------TCCEEEEEEEECSS-CCSEEEECT--TSSEEEEEETT
T ss_pred             ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCC-------CCceeeccccccCC-CCcEEEEcC--CCCEEEEEecC
Confidence            467789999999999999998887 99999998611       01223445555444 788999974  4787766665 


Q ss_pred             CCeEEEEeCCCCcE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCccee--eecc-cccccc
Q psy2762          89 DRKVIIWRGDNGNW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESR--KIAA-HTIGCN  163 (318)
Q Consensus        89 Dg~v~vWd~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~--~~~~-h~~~v~  163 (318)
                      ++.|.+||+..+.. .....+. ....+.+++|+|+  +..+++++ .++.|.+|++..........  .... ....+.
T Consensus       105 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~  181 (343)
T 1ri6_A          105 AGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR  181 (343)
T ss_dssp             TTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred             CCeEEEEECCCCcccccccccc-CCCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence            88999999853322 1222333 3346889999998  44455555 89999999985422111111  1222 233566


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEccC--CeEEEEEE---cc-cC--CCCeeEEEEccCCCC
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQEG--DKWIEETK---LE-NH--SDWVRDVAWAPSWGL  234 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~~--~~~~~~~~---~~-~h--~~~V~~v~~sp~~~~  234 (318)
                      .++|+|+                 +.+| +++..++.|++|++..  ++......   +. ++  ...+..++|+|+   
T Consensus       182 ~~~~~pd-----------------g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d---  241 (343)
T 1ri6_A          182 HMVFHPN-----------------EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD---  241 (343)
T ss_dssp             EEEECTT-----------------SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT---
T ss_pred             eEEECCC-----------------CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC---
Confidence            7899997                 3444 5566899999999853  33221211   22 11  235678999997   


Q ss_pred             CccEEE-EEeCCCeEEEEEcCC--CcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECC-CCceEEEeee
Q psy2762         235 SKCMIA-SCSQDRKVIIWTSND--YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT-DGAWQCITEM  309 (318)
Q Consensus       235 ~~~~l~-s~s~D~~i~vw~~~~--~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~-~~~~~~~~~~  309 (318)
                       +.+|+ +...|+.|++|++..  ........+... ..+..++|+|||++|++++ .|+.+++|+++. +|.++.+.++
T Consensus       242 -g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~  319 (343)
T 1ri6_A          242 -GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRY  319 (343)
T ss_dssp             -SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEE
T ss_pred             -CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcccc
Confidence             55554 666899999999973  111112222223 3388999999999988887 589999998875 4677777776


Q ss_pred             cccccc
Q psy2762         310 GKTSEQ  315 (318)
Q Consensus       310 ~~~~~~  315 (318)
                      ..-..+
T Consensus       320 ~~g~~p  325 (343)
T 1ri6_A          320 AVGQGP  325 (343)
T ss_dssp             ECSSSC
T ss_pred             ccCCCC
Confidence            553333

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.92  E-value=3.4e-22  Score=189.33  Aligned_cols=260  Identities=14%  Similarity=0.140  Sum_probs=186.3

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC--CCCCcEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH--PQFGTLLA   84 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~--~~~~~~la   84 (318)
                      .+..||.  ++.++|+|+|++|++++.|++|++||+..         .+++++.++.. ...+..++|++  ..+|++|+
T Consensus       174 ~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~---------~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~  241 (543)
T 1nir_A          174 VIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWA---------KEPTKVAEIKI-GIEARSVESSKFKGYEDRYTI  241 (543)
T ss_dssp             EEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTS---------SSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEE
T ss_pred             EEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcC---------CCCcEEEEEec-CCCcceEEeCCCcCCCCCEEE
Confidence            3444555  88999999999999999999999999931         13567777774 45679999974  00489999


Q ss_pred             EEEC-CCeEEEEeCCCCcEEEEEEecC--------CCc-CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          85 SCSY-DRKVIIWRGDNGNWFKYYEYNN--------HDS-SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        85 s~s~-Dg~v~vWd~~~~~~~~~~~~~~--------h~~-~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      ++++ +++|.|||..+.+.+.+....+        |.. .+.++.++|+. ..++++...++.|.+||+..... .....
T Consensus       242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~-~~~~vs~~~~g~i~vvd~~~~~~-l~~~~  319 (543)
T 1nir_A          242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKETGKVLLVNYKDIDN-LTVTS  319 (543)
T ss_dssp             EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEECTTSSS-CEEEE
T ss_pred             EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC-CEEEEEECCCCeEEEEEecCCCc-ceeEE
Confidence            9885 8999999998877655443321        223 78999999975 56788888899999999854332 11112


Q ss_pred             ecccccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEcc--cCCCCeeEEEEccC
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKLE--NHSDWVRDVAWAPS  231 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~~--~h~~~V~~v~~sp~  231 (318)
                      + .+...+..+.|+|+                 +++ ++++..+++|++||..++++.......  .|......+ ++|+
T Consensus       320 i-~~~~~~~~~~~spd-----------------g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~  380 (543)
T 1nir_A          320 I-GAAPFLHDGGWDSS-----------------HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPK  380 (543)
T ss_dssp             E-ECCSSCCCEEECTT-----------------SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred             e-ccCcCccCceECCC-----------------CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCC
Confidence            2 34455778899997                 355 455667899999999998765443321  254433333 4675


Q ss_pred             CCCCccEEEEEe-CCCeEEEEEcCCCc----ce-eeEEeeecCCcEEEEEEcCCCCEEEEEe-------CCCeEEEEEEC
Q psy2762         232 WGLSKCMIASCS-QDRKVIIWTSNDYV----TW-TPFIMNTFDDVVWNVSWSLTGDILTVSC-------GDNSVSLWKEN  298 (318)
Q Consensus       232 ~~~~~~~l~s~s-~D~~i~vw~~~~~~----~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~-------~D~~v~iW~~~  298 (318)
                         .+..++|++ .|++|.||+.....    .| ....+..+...+..|+|+|||++|++++       .+++|++||++
T Consensus       381 ---~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~  457 (543)
T 1nir_A          381 ---YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  457 (543)
T ss_dssp             ---TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             ---CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence               367788876 68999999987621    01 2345666777888999999999999987       27799999988


Q ss_pred             CCCc
Q psy2762         299 TDGA  302 (318)
Q Consensus       299 ~~~~  302 (318)
                      +...
T Consensus       458 ~~~~  461 (543)
T 1nir_A          458 NLDA  461 (543)
T ss_dssp             CTTS
T ss_pred             CCCC
Confidence            7543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.92  E-value=1.6e-21  Score=173.75  Aligned_cols=263  Identities=9%  Similarity=0.090  Sum_probs=176.6

Q ss_pred             CCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+...+..++|+|+|+ |++++.   ++.|.+|++...         ....+..+..|...+..++|++  ++++|++++
T Consensus        37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~~~p~~~a~sp--dg~~l~~~~  104 (347)
T 3hfq_A           37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ---------TAHKLNTVVAPGTPPAYVAVDE--ARQLVYSAN  104 (347)
T ss_dssp             EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT---------EEEEEEEEEEESCCCSEEEEET--TTTEEEEEE
T ss_pred             eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC---------cEEEeeeeecCCCCCEEEEECC--CCCEEEEEe
Confidence            3456778899999999 555443   689999999632         2235566667888899999974  588888888


Q ss_pred             -CCCeEEEEeCC-CCcEEEEEEecC---------CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762          88 -YDRKVIIWRGD-NGNWFKYYEYNN---------HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        88 -~Dg~v~vWd~~-~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                       .+++|.+|++. .+.......+..         +...+.+++|+|+  +.++++...++.|.+|++.............
T Consensus       105 ~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd--g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~  182 (347)
T 3hfq_A          105 YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD--NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT  182 (347)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT--SCEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred             CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC--CcEEEEeCCCCEEEEEEECCCCcEEEeeeEE
Confidence             67999999985 333333333321         1224889999999  4477777788999999985221111111111


Q ss_pred             c-cccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--CeEEEEEEcccCC------CCeeEE
Q psy2762         157 A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--DKWIEETKLENHS------DWVRDV  226 (318)
Q Consensus       157 ~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~~~~~~~~~~~h~------~~V~~v  226 (318)
                      . .......++|+|+                 ++ .+++...++.|++|+++.  +++.....+....      ..+..+
T Consensus       183 ~~~g~~p~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  245 (347)
T 3hfq_A          183 MEAGFGPRHLVFSPD-----------------GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI  245 (347)
T ss_dssp             CCTTCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred             cCCCCCCceEEECCC-----------------CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence            1 1224567899997                 34 445567789999999874  5543333333222      348899


Q ss_pred             EEccCCCCCccEE-EEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEEEEEcCCCCEEEEEeCC-CeEEEEEECC-CCc
Q psy2762         227 AWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWNVSWSLTGDILTVSCGD-NSVSLWKENT-DGA  302 (318)
Q Consensus       227 ~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-~~v~iW~~~~-~~~  302 (318)
                      +|+|+    |++| ++...++.|.+|++...... ....+..+...+..++|+|||++|++++.+ +.+++|+++. +|+
T Consensus       246 ~~spd----G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~  321 (347)
T 3hfq_A          246 RLSHD----GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK  321 (347)
T ss_dssp             EECTT----SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred             EECCC----CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence            99997    6655 66677999999998632111 122333344568899999999999888764 8999998875 456


Q ss_pred             eEEEee
Q psy2762         303 WQCITE  308 (318)
Q Consensus       303 ~~~~~~  308 (318)
                      ...+..
T Consensus       322 l~~~~~  327 (347)
T 3hfq_A          322 LSLLQK  327 (347)
T ss_dssp             EEEEEE
T ss_pred             EEeccc
Confidence            554443

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=5.4e-23  Score=177.51  Aligned_cols=237  Identities=14%  Similarity=0.104  Sum_probs=172.7

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEEEecCCCCCcEEEEEE-
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLLASCS-   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~~~~~~~~las~s-   87 (318)
                      ..|...|.+++|+|+|++|++++ ++.|.+||+...          ++......+| ...|.+++|++  ++++|++++ 
T Consensus        38 ~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~----------~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~~  104 (297)
T 2ojh_A           38 WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD----------PSPEKVDTGFATICNNDHGISP--DGALYAISDK  104 (297)
T ss_dssp             EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC----------CSCEECCCTTCCCBCSCCEECT--TSSEEEEEEC
T ss_pred             ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC----------CCceEeccccccccccceEECC--CCCEEEEEEe
Confidence            45888999999999999999987 889999998730          2333444455 47789999974  589999999 


Q ss_pred             -CCCeEEEEeC--CCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEE-EeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          88 -YDRKVIIWRG--DNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA-CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        88 -~Dg~v~vWd~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~la-sgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                       .++.++||.+  .++.   ...+.. ...+.+++|+|+  +..++ +++.++.+.+|++.....  ....+..|...+.
T Consensus       105 ~~~~~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~spd--g~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~  176 (297)
T 2ojh_A          105 VEFGKSAIYLLPSTGGT---PRLMTK-NLPSYWHGWSPD--GKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGRND  176 (297)
T ss_dssp             TTTSSCEEEEEETTCCC---CEECCS-SSSEEEEEECTT--SSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSCEE
T ss_pred             CCCCcceEEEEECCCCc---eEEeec-CCCccceEECCC--CCEEEEEECCCCceEEEEEECCCC--cceEcccCCCccc
Confidence             4456677654  4433   122333 345899999998  44444 788899999999754432  2345556777888


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEcc-CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQE-GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      .+.|+|+                 +.+|+.++ .++.++||++. .+.  ....+..|...+.++.|+|+    +.+|+.
T Consensus       177 ~~~~s~d-----------------g~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~s~d----g~~l~~  233 (297)
T 2ojh_A          177 GPDYSPD-----------------GRWIYFNSSRTGQMQIWRVRVDGS--SVERITDSAYGDWFPHPSPS----GDKVVF  233 (297)
T ss_dssp             EEEECTT-----------------SSEEEEEECTTSSCEEEEEETTSS--CEEECCCCSEEEEEEEECTT----SSEEEE
T ss_pred             cceECCC-----------------CCEEEEEecCCCCccEEEECCCCC--CcEEEecCCcccCCeEECCC----CCEEEE
Confidence            9999997                 35566554 68999999876 222  23456678888999999996    788888


Q ss_pred             EeCC-----------CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         242 CSQD-----------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       242 ~s~D-----------~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      ++.|           ..|.+|++.+........+..+...+..++|+|||++|++++.|.
T Consensus       234 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          234 VSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            8876           569999998754322333446777899999999999999887654

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.91  E-value=3.1e-22  Score=183.54  Aligned_cols=222  Identities=14%  Similarity=0.092  Sum_probs=169.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCC---cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE-
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDH---TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA-   84 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la-   84 (318)
                      ..+|.+.|.+++|+|+|++|++++.|+   +|++||+..           ++. ..+..|.+.+.+++|++  +|++|+ 
T Consensus       174 l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-----------g~~-~~l~~~~~~~~~~~~sp--dg~~la~  239 (415)
T 2hqs_A          174 VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-----------GAV-RQVASFPRHNGAPAFSP--DGSKLAF  239 (415)
T ss_dssp             EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-----------CCE-EEEECCSSCEEEEEECT--TSSEEEE
T ss_pred             EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-----------CcE-EEeecCCCcccCEEEcC--CCCEEEE
Confidence            357899999999999999999999886   999999963           333 35677889999999974  588777 


Q ss_pred             EEECCCe--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CC--eEEEEEeecCCCCcceeeecccc
Q psy2762          85 SCSYDRK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DG--TISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        85 s~s~Dg~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~--~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +++.|+.  |.+||+.+++.   ..+..|...+.+++|+|+  +..+++++. ++  .|.+|+....    ....+..|.
T Consensus       240 ~~~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spd--g~~l~~~s~~~g~~~i~~~d~~~~----~~~~l~~~~  310 (415)
T 2hqs_A          240 ALSKTGSLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPD--SQNLAFTSDQAGRPQVYKVNINGG----APQRITWEG  310 (415)
T ss_dssp             EECTTSSCEEEEEETTTCCE---EECCCCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTSS----CCEECCCSS
T ss_pred             EEecCCCceEEEEECCCCCE---EeCcCCCCcccceEECCC--CCEEEEEECCCCCcEEEEEECCCC----CEEEEecCC
Confidence            6666665  99999987753   345678889999999999  666766665 55  4555554322    233444566


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      ..+..++|+|+                 +++|+.++.+   ..|++||+.+++.   ..+..|. .+.+++|+|+    +
T Consensus       311 ~~~~~~~~spd-----------------G~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spd----g  365 (415)
T 2hqs_A          311 SQNQDADVSSD-----------------GKFMVMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPN----G  365 (415)
T ss_dssp             SEEEEEEECTT-----------------SSEEEEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTT----S
T ss_pred             CcccCeEECCC-----------------CCEEEEEECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCC----C
Confidence            67788999997                 4678877764   5899999988764   2345554 7999999996    7


Q ss_pred             cEEEEEeCCC---eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762         237 CMIASCSQDR---KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       237 ~~l~s~s~D~---~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      .+|++++.|+   .|.+|++.+..   ...+..+...|.+++|+|.-.
T Consensus       366 ~~l~~~s~~~~~~~l~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          366 TMVIYSSSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             SEEEEEEEETTEEEEEEEETTSCC---EEECCCSSSEEEEEEECCCCC
T ss_pred             CEEEEEEcCCCccEEEEEECCCCc---EEEeeCCCCCCcCCccccccc
Confidence            8888888877   79999987543   456677889999999999643

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.91  E-value=6.1e-23  Score=180.46  Aligned_cols=158  Identities=14%  Similarity=0.100  Sum_probs=114.2

Q ss_pred             CCcceeeeeeecC---CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc---cCeEEEEecCCCCCcEE-
Q psy2762          11 GHEDMIHDAEMDY---LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS---GPVWQVAWAHPQFGTLL-   83 (318)
Q Consensus        11 gH~~~v~~~~~~~---~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~~~~~~~~~l-   83 (318)
                      +|...|+.++|++   ++.+|+|||.|++|||||+.           +++++.++.+|.   ..|.+++|++  +|.++ 
T Consensus       176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~-----------TGk~l~tL~g~~~~v~~v~~vafSp--dG~~lv  242 (356)
T 2w18_A          176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK-----------TGQLLKKMHIDDSYQASVCHKAYSE--MGLLFI  242 (356)
T ss_dssp             ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT-----------TCCEEEEEECCC---CCCEEEEEEE--TTEEEE
T ss_pred             cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC-----------CCcEEEEEcCCCcceeeeEEEEECC--CCCEEE
Confidence            4555555555555   45678899999999999997           467889998754   4577778974  47765 


Q ss_pred             -----------EEEECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC
Q psy2762          84 -----------ASCSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS  149 (318)
Q Consensus        84 -----------as~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~  149 (318)
                                 +||+.|++|++||..+++...+..+   .+|...+.+.+++    +.++|+++.|++|+|||+..+.  
T Consensus       243 s~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s----g~~lASgS~DgTIkIWDl~tGk--  316 (356)
T 2w18_A          243 VLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK----DHCAAAILTSGTIAIWDLLLGQ--  316 (356)
T ss_dssp             EEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE----TTEEEEEETTSCEEEEETTTCS--
T ss_pred             EeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC----CCEEEEEcCCCcEEEEECCCCc--
Confidence                       7789999999999998875443322   3666655544444    4589999999999999985543  


Q ss_pred             cceeeecccccccc-eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762         150 WESRKIAAHTIGCN-AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ  205 (318)
Q Consensus       150 ~~~~~~~~h~~~v~-~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~  205 (318)
                       ....+.+|...+. .++|+|+                 +++||+|+.|++|||||.
T Consensus       317 -~l~tL~gH~~~vvs~vafSPD-----------------G~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          317 -CTALLPPVSDQHWSFVKWSGT-----------------DSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             -EEEEECCC--CCCCEEEECSS-----------------SSEEEEECTTSCEEEEEE
T ss_pred             -EEEEecCCCCCeEEEEEECCC-----------------CCEEEEEECCCcEEEecC
Confidence             3456678877655 5899997                 578999999999999985

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=2.8e-20  Score=164.35  Aligned_cols=248  Identities=12%  Similarity=0.119  Sum_probs=162.8

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-CeEEEEeCC--CCcE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-RKVIIWRGD--NGNW  102 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g~v~vWd~~--~~~~  102 (318)
                      .++++++.|+.|++||++..        .....+.. ..|...+.+++|++  ++++|++++.+ +.|++|++.  ++..
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~   74 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHE--------GALTLTQV-VDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGAL   74 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTT--------SCEEEEEE-EECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             EEEEeCCCCCeEEEEEECCC--------CcEEEeee-EecCCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCce
Confidence            34555588999999998521        11133333 34777899999974  58888888887 999999987  5554


Q ss_pred             EEEEEecCCCcCeEEEEeeCCCCCcEE-EEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccC
Q psy2762         103 FKYYEYNNHDSSVNSIAWAPKEFGLIL-ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       103 ~~~~~~~~h~~~v~~v~~~p~~~~~~l-asgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                      .....+..+. .+.+++|+|+  +.++ +++..++.|.+|++..+. .............+..++|+|+           
T Consensus        75 ~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~s~d-----------  139 (343)
T 1ri6_A           75 TFAAESALPG-SLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVVEGLDGCHSANISPD-----------  139 (343)
T ss_dssp             EEEEEEECSS-CCSEEEECTT--SSEEEEEETTTTEEEEEEEETTE-EEEEEEEECCCTTBCCCEECTT-----------
T ss_pred             eeccccccCC-CCcEEEEcCC--CCEEEEEecCCCeEEEEECCCCc-cccccccccCCCCceEEEECCC-----------
Confidence            4444454433 7889999998  5545 444558899999985211 1111222223335778899997           


Q ss_pred             CCCCCccceEEEec-CCCeEEEEEccC-CeEEEEE--Eccc-CCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCC
Q psy2762         182 SKLGGVAKRLVSGG-CDNLIKIWKQEG-DKWIEET--KLEN-HSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSND  255 (318)
Q Consensus       182 ~~~~~~~~~lasgs-~d~~i~iwd~~~-~~~~~~~--~~~~-h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~  255 (318)
                            +++|++++ .++.|++||+.. ++.....  .+.. ....+..+.|+|+    +.+| +++..++.|++|++..
T Consensus       140 ------g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd----g~~l~~~~~~~~~i~~~~~~~  209 (343)
T 1ri6_A          140 ------NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN----EQYAYCVNELNSSVDVWELKD  209 (343)
T ss_dssp             ------SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT----SSEEEEEETTTTEEEEEESSC
T ss_pred             ------CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCC----CCEEEEEeCCCCEEEEEEecC
Confidence                  34566555 899999999886 5443222  2222 3346889999996    6655 4555899999999854


Q ss_pred             Cc-cee-eEEeeec------CCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECC-CCceEEEeee
Q psy2762         256 YV-TWT-PFIMNTF------DDVVWNVSWSLTGDILTVSC-GDNSVSLWKENT-DGAWQCITEM  309 (318)
Q Consensus       256 ~~-~~~-~~~~~~~------~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~-~~~~~~~~~~  309 (318)
                      .. ... .......      ...+..++|+|||++|+.+. .|+.|++|+++. ++.+..+..+
T Consensus       210 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~  273 (343)
T 1ri6_A          210 PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ  273 (343)
T ss_dssp             TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred             CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence            21 111 1111111      23577899999999887554 799999999985 4455655544

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.90  E-value=5.7e-22  Score=194.09  Aligned_cols=242  Identities=9%  Similarity=0.087  Sum_probs=175.2

Q ss_pred             cceeeeeeecCCCCEEEEeeC-CC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccc--------------------
Q psy2762          13 EDMIHDAEMDYLGLYLATCSS-DH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHS--------------------   66 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~-D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~--------------------   66 (318)
                      ...|..++|+|||++|++++. |+     +|++||++.           ++....+..|.                    
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-----------GQTRLLVDSKVVLPGTETLSDEEKARRERQR  104 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-----------CCEEEEECGGGTC------------------
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-----------CceeEccchhhcccccccccchhhhhhhhhh
Confidence            457899999999999999998 88     999999863           33344444433                    


Q ss_pred             ----cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEE
Q psy2762          67 ----GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTIS  139 (318)
Q Consensus        67 ----~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~  139 (318)
                          ..|.+++|++  ||++|++++. +.|.+||+.++   ...   .+..|...+.+++|+|+  +..++.++ ++.|.
T Consensus       105 ~~~~~~v~~~~~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPD--G~~la~~~-~~~i~  175 (741)
T 2ecf_A          105 IAAMTGIVDYQWSP--DAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPK--GGFVSFIR-GRNLW  175 (741)
T ss_dssp             --CCEESCCCEECT--TSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTT--SSEEEEEE-TTEEE
T ss_pred             hccccCcceeEECC--CCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCC--CCEEEEEe-CCcEE
Confidence                2378999974  5999999886 99999999876   422   34567788999999999  67788776 56899


Q ss_pred             EEEeecCCCCcceeeec-cccc----------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----
Q psy2762         140 FLTYMSDTNSWESRKIA-AHTI----------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----  198 (318)
Q Consensus       140 i~~~~~~~~~~~~~~~~-~h~~----------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----  198 (318)
                      +|+...+.    ...+. .+..                .+..++|+|+                 +++|++++.|+    
T Consensus       176 ~~d~~~g~----~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD-----------------g~~l~~~~~d~~~~~  234 (741)
T 2ecf_A          176 VIDLASGR----QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPD-----------------DSAIAYARIDESPVP  234 (741)
T ss_dssp             EEETTTTE----EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTT-----------------SSCEEEEEEECTTSC
T ss_pred             EEecCCCC----EEEeccCCccceeccccceeeeeccccccceEECCC-----------------CCEEEEEEEcCCCCc
Confidence            99874321    22222 2221                1477899997                 46677776665    


Q ss_pred             -----------------------------eEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC----
Q psy2762         199 -----------------------------LIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ----  244 (318)
Q Consensus       199 -----------------------------~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~----  244 (318)
                                                   .|++||+.+ ++.........|...+..++| |+    |++|+.++.    
T Consensus       235 ~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pD----g~~l~~~~~~~~~  309 (741)
T 2ecf_A          235 VQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RD----PQHLSFQRQSRDQ  309 (741)
T ss_dssp             EEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EE----TTEEEEEEEETTS
T ss_pred             eEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CC----CCEEEEEEecccC
Confidence                                         788899887 754322211257788999999 96    777876654    


Q ss_pred             -CCeEEEEEcCCCcceeeEEeeecC-C---cEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         245 -DRKVIIWTSNDYVTWTPFIMNTFD-D---VVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       245 -D~~i~vw~~~~~~~~~~~~~~~~~-~---~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                       +..|++||+.+....  ..+..+. .   .+.+++|+|||++|++++.|+.++||..+..+.
T Consensus       310 ~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~  370 (741)
T 2ecf_A          310 KKLDLVEVTLASNQQR--VLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK  370 (741)
T ss_dssp             SEEEEEEEETTTCCEE--EEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred             CeEEEEEEECCCCceE--EEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence             678999999875421  2222222 2   356899999999999999999999999875444

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=3.1e-21  Score=177.93  Aligned_cols=266  Identities=14%  Similarity=0.152  Sum_probs=175.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE-----EEEecccccCeEEEEecCCCCCcEEE--
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL-----IAELKGHSGPVWQVAWAHPQFGTLLA--   84 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~-----~~~~~~h~~~V~~v~~~~~~~~~~la--   84 (318)
                      +...++.+++++++.++++++.|+ ++||+.................     ...+ .|.+.|++++|++  ++++||  
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~sp--dg~~lav~  110 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSC--DNLTLSAC  110 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECT--TSCEEEEE
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcC--CCCEEEEE
Confidence            445688999999999999999887 9999864211100000000011     1112 3677899999974  589999  


Q ss_pred             --EEECCCeEEEEeCCCC--------cE-EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          85 --SCSYDRKVIIWRGDNG--------NW-FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        85 --s~s~Dg~v~vWd~~~~--------~~-~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                        +|+.|++|+|||+.+.        +. .....+.+|...|.+++|+|+. +.++++++.|++|++||+....   ...
T Consensus       111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~---~~~  186 (434)
T 2oit_A          111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETV---KVC  186 (434)
T ss_dssp             EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSE---EEE
T ss_pred             EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCc---cee
Confidence              8999999999997543        11 1233456799999999999974 5689999999999999985442   223


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-----cCCCCeeEEEE
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-----NHSDWVRDVAW  228 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-----~h~~~V~~v~~  228 (318)
                      ...+|...+.+++|+|+                 +++|++|+.|++|++||.+. +........     .|...|.+++|
T Consensus       187 ~~~~~~~~v~~v~wspd-----------------g~~lasgs~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~v~w  248 (434)
T 2oit_A          187 ATLPSTVAVTSVCWSPK-----------------GKQLAVGKQNGTVVQYLPTL-QEKKVIPCPPFYESDHPVRVLDVLW  248 (434)
T ss_dssp             EEECGGGCEEEEEECTT-----------------SSCEEEEETTSCEEEECTTC-CEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred             eccCCCCceeEEEEcCC-----------------CCEEEEEcCCCcEEEEccCC-cccccccCCcccCCCCceeEEEEEE
Confidence            34468889999999997                 57899999999999999873 322221111     23347999999


Q ss_pred             ccCCCCCccEEEE-EeCCC------eEEEEEcCCCcceeeE---Eee-------ecCCcEEEEEEcCCCCEEEEEeC-CC
Q psy2762         229 APSWGLSKCMIAS-CSQDR------KVIIWTSNDYVTWTPF---IMN-------TFDDVVWNVSWSLTGDILTVSCG-DN  290 (318)
Q Consensus       229 sp~~~~~~~~l~s-~s~D~------~i~vw~~~~~~~~~~~---~~~-------~~~~~v~~v~~spdg~~l~s~~~-D~  290 (318)
                      +++    +.++++ .+.|+      .+++|++.+.....+.   ...       ....+-..+.+-+|.++|+.++. .+
T Consensus       249 ~~~----~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~  324 (434)
T 2oit_A          249 IGT----YVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAST  324 (434)
T ss_dssp             EET----TEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCS
T ss_pred             ecC----ceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCC
Confidence            995    455543 43443      3899998764211011   111       11122234445578778776664 66


Q ss_pred             eEEEEEECCCC-ceEEEe
Q psy2762         291 SVSLWKENTDG-AWQCIT  307 (318)
Q Consensus       291 ~v~iW~~~~~~-~~~~~~  307 (318)
                      .|.|.....++ .|.+..
T Consensus       325 dv~vl~~~~~~~~~~~~~  342 (434)
T 2oit_A          325 EVSILARQSDQINWESWL  342 (434)
T ss_dssp             BCEEEEECTTSSCEEEEE
T ss_pred             ceeEEEecCCCCccEEEe
Confidence            78888865543 475543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.89  E-value=1e-20  Score=179.29  Aligned_cols=246  Identities=13%  Similarity=0.144  Sum_probs=175.6

Q ss_pred             eecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeC--
Q psy2762          20 EMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRG--   97 (318)
Q Consensus        20 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~--   97 (318)
                      +|+|++.++++++.|++|.+||..           +++++.++..+.. +..++|++  ++++|++++.|++|++||+  
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~-----------t~~~~~~i~~g~~-~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~  209 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGD-----------SKKIVKVIDTGYA-VHISRMSA--SGRYLLVIGRDARIDMIDLWA  209 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETT-----------TCCEEEEEECSTT-EEEEEECT--TSCEEEEEETTSEEEEEETTS
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECC-----------CceEEEEEecCcc-cceEEECC--CCCEEEEECCCCeEEEEECcC
Confidence            489999999999999999999986           4567888873333 88999974  5999999999999999999  


Q ss_pred             CCCcEEEEEEecCCCcCeEEEEeeC----CCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecc----------ccc-c
Q psy2762          98 DNGNWFKYYEYNNHDSSVNSIAWAP----KEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAA----------HTI-G  161 (318)
Q Consensus        98 ~~~~~~~~~~~~~h~~~v~~v~~~p----~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~----------h~~-~  161 (318)
                      .+.+.  ..++. +...+..++|+|    +  +.++++++ .+++|.+||.....   .+..+..          |.. .
T Consensus       210 ~t~~~--~~~i~-~g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t~~---~~~~i~~~g~~~~~~~~~~~~~  281 (543)
T 1nir_A          210 KEPTK--VAEIK-IGIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGETLE---PKQIVSTRGMTVDTQTYHPEPR  281 (543)
T ss_dssp             SSCEE--EEEEE-CCSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTTCC---EEEEEECCEECSSSCCEESCCC
T ss_pred             CCCcE--EEEEe-cCCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccccc---cceeecccCcccCccccccCCc
Confidence            66553  33444 445679999999    8  56666666 58999999864332   1222222          222 4


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE-
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA-  240 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~-  240 (318)
                      +..+.++|+.                ..++++...++.|.+||..+.+......+ .+...+.++.|+|+    +++|+ 
T Consensus       282 v~~i~~s~~~----------------~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spd----g~~l~v  340 (543)
T 1nir_A          282 VAAIIASHEH----------------PEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSS----HRYFMT  340 (543)
T ss_dssp             EEEEEECSSS----------------SEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTT----SCEEEE
T ss_pred             eEEEEECCCC----------------CEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCC----CCEEEE
Confidence            6677788753                35788999999999999876543222233 35667889999996    66555 


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEee----ecCCcEEEEEEcCC-CCEEEEEe-CCCeEEEEEECCCCc----eEEEeeec
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLT-GDILTVSC-GDNSVSLWKENTDGA----WQCITEMG  310 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~----~~~~~v~~v~~spd-g~~l~s~~-~D~~v~iW~~~~~~~----~~~~~~~~  310 (318)
                      ++..+++|.+||..+...  ...+.    .|......+ ++|+ |+.++++. .|++|++|++++.+.    |++++.+.
T Consensus       341 a~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~  417 (543)
T 1nir_A          341 AANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ  417 (543)
T ss_dssp             EEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred             EecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence            555689999999987542  22222    244333333 5787 67777765 689999999988554    88887775


Q ss_pred             c
Q psy2762         311 K  311 (318)
Q Consensus       311 ~  311 (318)
                      .
T Consensus       418 ~  418 (543)
T 1nir_A          418 G  418 (543)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=1.6e-20  Score=161.92  Aligned_cols=230  Identities=16%  Similarity=0.142  Sum_probs=164.9

Q ss_pred             EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-CcEEEEEEe
Q psy2762          30 TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-GNWFKYYEY  108 (318)
Q Consensus        30 s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-~~~~~~~~~  108 (318)
                      +++.|++|++||+..           ++ ...+..|.+.|.+++|++  ++++|++++ ++.|.+||+.+ ++....  .
T Consensus        17 ~~~~~~~i~~~d~~~-----------~~-~~~~~~~~~~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~~--~   79 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRT-----------RK-MRVVWQTPELFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEKV--D   79 (297)
T ss_dssp             -CCCCEEEEEEETTT-----------TE-EEEEEEESSCCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEEC--C
T ss_pred             CCCcceeEEEEeCCC-----------Cc-eeeeccCCcceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceEe--c
Confidence            467899999999863           33 345667899999999974  589999987 88999999988 654332  3


Q ss_pred             cCC-CcCeEEEEeeCCCCCcEEEEee--cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCC
Q psy2762         109 NNH-DSSVNSIAWAPKEFGLILACGS--SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       109 ~~h-~~~v~~v~~~p~~~~~~lasgs--~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      ..+ ...+.+++|+|+  +.++++++  .++.+.||.+.....  ....+..+ ..+..++|+|+               
T Consensus        80 ~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~-~~~~~~~~spd---------------  139 (297)
T 2ojh_A           80 TGFATICNNDHGISPD--GALYAISDKVEFGKSAIYLLPSTGG--TPRLMTKN-LPSYWHGWSPD---------------  139 (297)
T ss_dssp             CTTCCCBCSCCEECTT--SSEEEEEECTTTSSCEEEEEETTCC--CCEECCSS-SSEEEEEECTT---------------
T ss_pred             cccccccccceEECCC--CCEEEEEEeCCCCcceEEEEECCCC--ceEEeecC-CCccceEECCC---------------
Confidence            344 467899999998  66788877  446777877654332  12233333 34778899997               


Q ss_pred             CccceEE-EecCCCeEEEEEcc--CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCcceee
Q psy2762         186 GVAKRLV-SGGCDNLIKIWKQE--GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTP  261 (318)
Q Consensus       186 ~~~~~la-sgs~d~~i~iwd~~--~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~  261 (318)
                        +++|+ +++.|+.++||+++  +++   ...+..|...+.++.|+|+    +.+|+.++ .|+.++||++.... ...
T Consensus       140 --g~~l~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~s~d----g~~l~~~~~~~~~~~i~~~~~~~-~~~  209 (297)
T 2ojh_A          140 --GKSFTYCGIRDQVFDIYSMDIDSGV---ETRLTHGEGRNDGPDYSPD----GRWIYFNSSRTGQMQIWRVRVDG-SSV  209 (297)
T ss_dssp             --SSEEEEEEEETTEEEEEEEETTTCC---EEECCCSSSCEEEEEECTT----SSEEEEEECTTSSCEEEEEETTS-SCE
T ss_pred             --CCEEEEEECCCCceEEEEEECCCCc---ceEcccCCCccccceECCC----CCEEEEEecCCCCccEEEECCCC-CCc
Confidence              35555 78899999999854  333   2445678888999999996    66666655 59999999875322 123


Q ss_pred             EEeeecCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEEECCCCceEEEe
Q psy2762         262 FIMNTFDDVVWNVSWSLTGDILTVSCGD-----------NSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       262 ~~~~~~~~~v~~v~~spdg~~l~s~~~D-----------~~v~iW~~~~~~~~~~~~  307 (318)
                      ..+..+...+..++|+|||++|+.++.+           +.|.+|+...+ +...+.
T Consensus       210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~~~~~  265 (297)
T 2ojh_A          210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG-NVETLF  265 (297)
T ss_dssp             EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC-SCEEEE
T ss_pred             EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC-Cceeee
Confidence            4455566789999999999999988866           56999997654 444443

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.88  E-value=5.5e-20  Score=162.40  Aligned_cols=249  Identities=8%  Similarity=0.015  Sum_probs=165.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceE-EEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTL-IAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .+...+ .++|+|+|++|+.++. ++.|.+||+..           ++. ...+..+..+..+++|++  ++++|+++..
T Consensus        38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~  103 (331)
T 3u4y_A           38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-----------EPPKVVAIQEGQSSMADVDITP--DDQFAVTVTG  103 (331)
T ss_dssp             CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-----------SSCEEEEEEECSSCCCCEEECT--TSSEEEECCC
T ss_pred             ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-----------CceeEEecccCCCCccceEECC--CCCEEEEecC
Confidence            345566 8999999997766665 89999999863           233 566667777776689964  5888885555


Q ss_pred             CC---eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe-EEEEEeecCCCCcce-eeecccccccc
Q psy2762          89 DR---KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT-ISFLTYMSDTNSWES-RKIAAHTIGCN  163 (318)
Q Consensus        89 Dg---~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~-i~i~~~~~~~~~~~~-~~~~~h~~~v~  163 (318)
                      ++   .|.+||+.+++....  +. +.....+++|+|++ ..++++...++. |.+|++......... ...........
T Consensus       104 ~~~~~~i~v~d~~~~~~~~~--~~-~~~~~~~~~~spdg-~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~  179 (331)
T 3u4y_A          104 LNHPFNMQSYSFLKNKFIST--IP-IPYDAVGIAISPNG-NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF  179 (331)
T ss_dssp             SSSSCEEEEEETTTTEEEEE--EE-CCTTEEEEEECTTS-SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred             CCCcccEEEEECCCCCeEEE--EE-CCCCccceEECCCC-CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence            53   999999988765443  33 23456899999984 236666666678 999998533211111 11112334467


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCeeEEEEccCCCCCccEE-E
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVRDVAWAPSWGLSKCMI-A  240 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~~l-~  240 (318)
                      .++|+|+                 ++ .++++..++.|++||+.+++. .....+.. ...+..++|+|+    +.+| +
T Consensus       180 ~~~~spd-----------------g~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spd----g~~l~v  237 (331)
T 3u4y_A          180 NITFTPD-----------------GNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRD----GSTVYV  237 (331)
T ss_dssp             EEEECTT-----------------SSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTT----SSEEEE
T ss_pred             ceEECCC-----------------CCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCC----CCEEEE
Confidence            8899997                 34 456666789999999887654 11233333 355789999997    6655 4


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeec----CC---cEEEEEEcCCCCEEEEEeC-CCeEEEEEECC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTF----DD---VVWNVSWSLTGDILTVSCG-DNSVSLWKENT  299 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~----~~---~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~  299 (318)
                      +...++.|.+||..+............    ..   ....++|+|||++|+.++. +++|++|++..
T Consensus       238 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~  304 (331)
T 3u4y_A          238 LTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG  304 (331)
T ss_dssp             ECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred             EEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence            445688899999876532111111111    11   2345899999999876665 66999999765

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.88  E-value=2.1e-21  Score=185.21  Aligned_cols=232  Identities=8%  Similarity=0.027  Sum_probs=171.2

Q ss_pred             cceeeeeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEEEEEEC--
Q psy2762          13 EDMIHDAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLLASCSY--   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~las~s~--   88 (318)
                      ..+|++++|+|||++||+++. ||+++||+++.           +. ...+..|. ..|..++|+ | + +++++++.  
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~-----------g~-~~~lt~~~~~~~~~~~~s-p-d-~~l~~~~~~~   85 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG-----------GE-TVKLNREPINSVLDPHYG-V-G-RVILVRDVSK   85 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET-----------TE-EEECCSSCCSEECEECTT-C-S-EEEEEEECST
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcC-----------CC-cEeeecccccccccccCC-C-C-eEEEEeccCC
Confidence            557999999999999999887 99999999852           33 34555555 689999997 4 3 78887775  


Q ss_pred             -CCeEEEEeCCC---CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          89 -DRKVIIWRGDN---GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        89 -Dg~v~vWd~~~---~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                       +...+||.+..   +.. .  .+.. ...+...+|+|+....++++++.++.+ +|++..+.    ...+..+..  ..
T Consensus        86 g~~~~~l~~~~~~~~g~~-~--~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~----~~~l~~~~~--~~  154 (582)
T 3o4h_A           86 GAEQHALFKVNTSRPGEE-Q--RLEA-VKPMRILSGVDTGEAVVFTGATEDRVA-LYALDGGG----LRELARLPG--FG  154 (582)
T ss_dssp             TSCCEEEEEEETTSTTCC-E--ECTT-SCSBEEEEEEECSSCEEEEEECSSCEE-EEEEETTE----EEEEEEESS--CE
T ss_pred             CCcceEEEEEeccCCCcc-c--cccC-CCCceeeeeCCCCCeEEEEecCCCCce-EEEccCCc----EEEeecCCC--ce
Confidence             56667765432   221 1  2222 223446788888655667766666654 99885432    333443333  78


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCC----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      ++|+|+                 +++||+++.|    +.|++||+.+++..   .+..|...+..++|||+    |+.|+
T Consensus       155 ~~~spD-----------------G~~la~~~~~~~~~~~i~~~d~~~g~~~---~l~~~~~~~~~~~~SpD----G~~l~  210 (582)
T 3o4h_A          155 FVSDIR-----------------GDLIAGLGFFGGGRVSLFTSNLSSGGLR---VFDSGEGSFSSASISPG----MKVTA  210 (582)
T ss_dssp             EEEEEE-----------------TTEEEEEEEEETTEEEEEEEETTTCCCE---EECCSSCEEEEEEECTT----SCEEE
T ss_pred             EEECCC-----------------CCEEEEEEEcCCCCeEEEEEcCCCCCce---EeecCCCccccceECCC----CCEEE
Confidence            889997                 5789988877    78999998887642   45788888999999996    88899


Q ss_pred             EEeCCC--eEEEEEcCCCcceeeEEeeecCCcEEEEE--------EcCCCCEEEEEeCCCeEEEEEE
Q psy2762         241 SCSQDR--KVIIWTSNDYVTWTPFIMNTFDDVVWNVS--------WSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       241 s~s~D~--~i~vw~~~~~~~~~~~~~~~~~~~v~~v~--------~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ++..|+  +|++||+.+...   ..+..+...+.+++        |+|||+++++++.|++++||++
T Consensus       211 ~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          211 GLETAREARLVTVDPRDGSV---EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             EEECSSCEEEEEECTTTCCE---EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             EccCCCeeEEEEEcCCCCcE---EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            888898  899999877542   24556666666777        9999999999999999999997

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.87  E-value=4e-19  Score=159.17  Aligned_cols=257  Identities=12%  Similarity=0.125  Sum_probs=170.0

Q ss_pred             CcceeeeeeecCCCCEEEEeeCC----CcEEEEEcCCCcCCCCCCCCcc--eEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSD----HTVKVFNLDRNLKKDDSHSQKG--TLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      |...+..++|+|+|++|++++.+    +.|.+|+++..         ++  ..+.....+......+++    ++++|++
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~---------~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~  114 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE---------KGTLHLLNTQKTMGADPCYLTT----NGKNIVT  114 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT---------TTEEEEEEEEECSSSCEEEEEE----CSSEEEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC---------CCcEEEeeEeccCCCCcEEEEE----CCCEEEE
Confidence            56677889999999999999886    89999998621         13  234445555666777776    3677777


Q ss_pred             EE-CCCeEEEEeCCCCcEE----EEEEecC--------CCcCeEEEEeeCCCCCc-EEEEeecCCeEEEEEeecCCC---
Q psy2762          86 CS-YDRKVIIWRGDNGNWF----KYYEYNN--------HDSSVNSIAWAPKEFGL-ILACGSSDGTISFLTYMSDTN---  148 (318)
Q Consensus        86 ~s-~Dg~v~vWd~~~~~~~----~~~~~~~--------h~~~v~~v~~~p~~~~~-~lasgs~d~~i~i~~~~~~~~---  148 (318)
                      ++ .+++|.+|++......    ......+        +...+.+++|+|+  +. ++++...++.|.+|++.....   
T Consensus       115 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~  192 (361)
T 3scy_A          115 ANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD--GKYLLADDLGTDQIHKFNINPNANADN  192 (361)
T ss_dssp             EETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred             EECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence            76 5789999998643211    1111111        1234578999998  54 555555688999999854432   


Q ss_pred             -C-cce----ee-ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEccCCeEEEEEEc---c
Q psy2762         149 -S-WES----RK-IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQEGDKWIEETKL---E  217 (318)
Q Consensus       149 -~-~~~----~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~~~~~~~~~~~---~  217 (318)
                       . ...    .. ...+......++|+|+                 +++|++++ .++.|++|++.++++.....+   .
T Consensus       193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~  255 (361)
T 3scy_A          193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSD-----------------GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT  255 (361)
T ss_dssp             CCCCEEEEEEEEEECCTTCCEEEEEECTT-----------------SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred             ccceeecccccceecCCCCCCeEEEEcCC-----------------CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence             1 111    11 1223345678899997                 45565555 689999999987765333333   3


Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeC--CCeEEEEEcCC--CcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeE
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQ--DRKVIIWTSND--YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSV  292 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~--D~~i~vw~~~~--~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v  292 (318)
                      .+......++|+|+    |++|+++..  ++.|++|++..  ........... ...+..++|+|||++|++++ .++.|
T Consensus       256 ~~~~~~~~i~~spd----g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v  330 (361)
T 3scy_A          256 VNAQGSGDIHLSPD----GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVI  330 (361)
T ss_dssp             SCCCCEEEEEECTT----SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred             CCCCCcccEEECCC----CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCE
Confidence            34455789999996    777766555  48999999862  11111122222 45678999999999998888 67899


Q ss_pred             EEEEECC-CCceEE
Q psy2762         293 SLWKENT-DGAWQC  305 (318)
Q Consensus       293 ~iW~~~~-~~~~~~  305 (318)
                      ++|+++. +|+...
T Consensus       331 ~v~~~d~~~g~~~~  344 (361)
T 3scy_A          331 QIFERDQATGLLTD  344 (361)
T ss_dssp             EEEEECTTTCCEEE
T ss_pred             EEEEEECCCCcEee
Confidence            9998875 444443

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.87  E-value=2.5e-21  Score=188.96  Aligned_cols=239  Identities=11%  Similarity=0.095  Sum_probs=164.1

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc---CeEEEEecCCCCCcEEEEEECC-
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG---PVWQVAWAHPQFGTLLASCSYD-   89 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~~~~las~s~D-   89 (318)
                      ..+.+++|+|||+++++ +.||+|++||+..           ++....+..|..   .|.+++|++  ||++|++++.+ 
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~-----------g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~   82 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVET-----------NTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVE   82 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGG-----------CCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCC
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCC-----------CcEEEEeccccccccccceEEECC--CCCEEEEEecCc
Confidence            45788999999998876 7899999999873           344556666665   499999974  59999999875 


Q ss_pred             --------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-ccccc
Q psy2762          90 --------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTI  160 (318)
Q Consensus        90 --------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~  160 (318)
                              +.+.+||+.+++........+|...+..++|+|+  +..+|.++. +.|.+|+...+.    ...+ ..+..
T Consensus        83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPd--G~~la~~~~-~~i~~~~~~~g~----~~~~~~~~~~  155 (723)
T 1xfd_A           83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK--GQQLIFIFE-NNIYYCAHVGKQ----AIRVVSTGKE  155 (723)
T ss_dssp             CCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS--TTCEEEEET-TEEEEESSSSSC----CEEEECCCBT
T ss_pred             cceeecceeeEEEEECCCCceEeccCCccccccccccEECCC--CCEEEEEEC-CeEEEEECCCCc----eEEEecCCCC
Confidence                    7788999988764332222345556889999999  667887775 789999864432    1222 22222


Q ss_pred             c------------------cceeeeCCCCCCCccccccCCCCCCccceEEEecCCC------------------------
Q psy2762         161 G------------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN------------------------  198 (318)
Q Consensus       161 ~------------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~------------------------  198 (318)
                      .                  +..++|+|+.                 ++||+++.|+                        
T Consensus       156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-----------------~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (723)
T 1xfd_A          156 GVIYNGLSDWLYEEEILKTHIAHWWSPDG-----------------TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY  218 (723)
T ss_dssp             TTEEEEECCHHHHHTTSSSSEEEEECTTS-----------------SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred             CceECcccceeEEEEeccCcceEEECCCC-----------------CEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence            2                  2679999983                 4555555432                        


Q ss_pred             ----------eEEEEEccCCeEEEEEEccc------CCCCeeEEEEccCCCCCccEEEEEeC----CCeEEEEEcCCCcc
Q psy2762         199 ----------LIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPSWGLSKCMIASCSQ----DRKVIIWTSNDYVT  258 (318)
Q Consensus       199 ----------~i~iwd~~~~~~~~~~~~~~------h~~~V~~v~~sp~~~~~~~~l~s~s~----D~~i~vw~~~~~~~  258 (318)
                                .|++||+.+++.  ...+..      |...+..+.|||+    |++|++.+.    +..|++||+.+...
T Consensus       219 ~~~G~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpD----g~~l~~~~~~~~~~~~i~~~d~~~g~~  292 (723)
T 1xfd_A          219 PKAGSENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATS----TKVAVTWLNRAQNVSILTLCDATTGVC  292 (723)
T ss_dssp             CBTTSCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSS----SEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred             CCCCCCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCC----CeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence                      799999887653  123333      3667899999996    777876653    36799999877542


Q ss_pred             eeeEEe-eecCCcEE----EEEEcCCCCEEEE--EeCCC----eEEEEEEC
Q psy2762         259 WTPFIM-NTFDDVVW----NVSWSLTGDILTV--SCGDN----SVSLWKEN  298 (318)
Q Consensus       259 ~~~~~~-~~~~~~v~----~v~~spdg~~l~s--~~~D~----~v~iW~~~  298 (318)
                      .  ..+ ..+...+.    +++|||||+.|+.  +..|+    ..+||..+
T Consensus       293 ~--~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d  341 (723)
T 1xfd_A          293 T--KKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS  341 (723)
T ss_dssp             E--EEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred             e--EEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence            1  222 22334443    7899999998775  44677    55555544

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.87  E-value=1e-19  Score=160.41  Aligned_cols=253  Identities=11%  Similarity=0.053  Sum_probs=164.2

Q ss_pred             eeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCCCCCcEEEEEE-
Q psy2762          15 MIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHPQFGTLLASCS-   87 (318)
Q Consensus        15 ~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~~~~~~las~s-   87 (318)
                      .+..++|+|+|+++ ++++.++.|.+||+..           ++.+..+..     |...+.+++|++  ++++|++++ 
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~  101 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT-----------GETLGRIDLSTPEERVKSLFGAALSP--DGKTLAIYES  101 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTT-----------CCEEEEEECCBTTEEEECTTCEEECT--TSSEEEEEEE
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCC-----------CCeEeeEEcCCcccccccccceEECC--CCCEEEEEec
Confidence            48889999999865 5566789999999863           344544442     233677899974  588888886 


Q ss_pred             -----------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762          88 -----------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        88 -----------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                                 .++.|.+||+.+++.....  .. ...+.+++|+|+  +.+++++  ++.|.+||.....   ....+.
T Consensus       102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~--~~-~~~~~~~~~s~d--g~~l~~~--~~~i~~~d~~~~~---~~~~~~  171 (337)
T 1pby_B          102 PVRLELTHFEVQPTRVALYDAETLSRRKAF--EA-PRQITMLAWARD--GSKLYGL--GRDLHVMDPEAGT---LVEDKP  171 (337)
T ss_dssp             EEEECSSCEEECCCEEEEEETTTTEEEEEE--EC-CSSCCCEEECTT--SSCEEEE--SSSEEEEETTTTE---EEEEEC
T ss_pred             ccccccccccccCceEEEEECCCCcEEEEE--eC-CCCcceeEECCC--CCEEEEe--CCeEEEEECCCCc---Eeeeee
Confidence                       6799999999877644333  22 455788999998  4545555  6789999874332   112222


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----------eEEEEEccCCeEEEEEEcccCCCCeeEE
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----------LIKIWKQEGDKWIEETKLENHSDWVRDV  226 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----------~i~iwd~~~~~~~~~~~~~~h~~~V~~v  226 (318)
                      .+. ....+.|+|+...+..........   ......+..++          .|.+||+.+++.. ...+..+...+.++
T Consensus       172 ~~~-~~~~~~~s~dg~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~  246 (337)
T 1pby_B          172 IQS-WEAETYAQPDVLAVWNQHESSGVM---ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFST  246 (337)
T ss_dssp             STT-TTTTTBCCCBCCCCCCCCTTTTEE---EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEE
T ss_pred             ccc-cCCCceeCCCccEEeeeccCCCce---eeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeE
Confidence            221 112346777642211100000000   00011111222          5899999888754 44556677778999


Q ss_pred             EEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         227 AWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      +|+|+    +.+|+++  ++.|++||+.+...  ...+ .....+.+++|+|||++|++++.|+.|++||...+....
T Consensus       247 ~~s~d----g~~l~~~--~~~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~  315 (337)
T 1pby_B          247 AVNPA----KTRAFGA--YNVLESFDLEKNAS--IKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG  315 (337)
T ss_dssp             EECTT----SSEEEEE--ESEEEEEETTTTEE--EEEE-ECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred             EECCC----CCEEEEe--CCeEEEEECCCCcC--ccee-cCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence            99996    7777777  79999999876431  1222 234567899999999999999999999999987764443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.87  E-value=1.4e-19  Score=160.32  Aligned_cols=238  Identities=11%  Similarity=0.026  Sum_probs=160.1

Q ss_pred             eeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcE-EEEEECCCeEEEE
Q psy2762          18 DAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTL-LASCSYDRKVIIW   95 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~-las~s~Dg~v~vW   95 (318)
                      .+++++++.++++++.|++|.+||+.           +++.+.++..+. ..+..++|++  ++++ +++...++.|.+|
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~~~~i~~~   70 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVA-----------SDTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGI   70 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETT-----------TTEEEEEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECC-----------CCcEEEEEecCCCCCCceeEECC--CCCEEEEEeCCCCcEEEE
Confidence            46788999999999999999999986           346666666443 2567889974  4665 4566678999999


Q ss_pred             eCCCCcEEEEEEecCC----CcCeEEEEeeCCCCCcEEEEeecC------------CeEEEEEeecCCCCcceeeecccc
Q psy2762          96 RGDNGNWFKYYEYNNH----DSSVNSIAWAPKEFGLILACGSSD------------GTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        96 d~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~~lasgs~d------------~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      |+.+++......+...    ...+.+++|+|+  +.++++++.+            +.|.+||+..+... .......+.
T Consensus        71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~  147 (349)
T 1jmx_B           71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTFPMP  147 (349)
T ss_dssp             ETTTTEEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEEECC
T ss_pred             eCCCCcEEEEEEcccccccccccccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCcccc-ceeeeccCC
Confidence            9988764443332211    233788999998  6667777654            89999997543211 111122333


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc---------------------
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN---------------------  218 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~---------------------  218 (318)
                      ..+..++|+|+                 ++ ++.++.+  |++||..+++.........                     
T Consensus       148 ~~~~~~~~s~d-----------------g~-l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (349)
T 1jmx_B          148 RQVYLMRAADD-----------------GS-LYVAGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPR  207 (349)
T ss_dssp             SSCCCEEECTT-----------------SC-EEEESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTT
T ss_pred             CcccceeECCC-----------------Cc-EEEccCc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcc
Confidence            45778889997                 34 4444443  8888887765433222110                     


Q ss_pred             ---------------------------------------------CCCCeeEEEEcc-CCCCCccEEEEEeCCCeEEEEE
Q psy2762         219 ---------------------------------------------HSDWVRDVAWAP-SWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       219 ---------------------------------------------h~~~V~~v~~sp-~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                                                   +...+..++|+| +    +.+|+++  ++.|.+||
T Consensus       208 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~d----g~~l~~~--~~~v~~~d  281 (349)
T 1jmx_B          208 HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKD----PNQIYGV--LNRLAKYD  281 (349)
T ss_dssp             CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSC----TTEEEEE--ESEEEEEE
T ss_pred             eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCC----CCEEEEE--cCeEEEEE
Confidence                                                         112345667778 6    6677777  88999999


Q ss_pred             cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +.+...  ...+ .....+..++|+|||++|++++.++.|++||..+.
T Consensus       282 ~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~  326 (349)
T 1jmx_B          282 LKQRKL--IKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL  326 (349)
T ss_dssp             TTTTEE--EEEE-ECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred             CccCeE--EEEE-cCCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence            977431  1222 23345779999999999998888999999997765

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=9.1e-20  Score=177.58  Aligned_cols=250  Identities=10%  Similarity=0.057  Sum_probs=168.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc--------------CeEEEEec
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG--------------PVWQVAWA   75 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~--------------~V~~v~~~   75 (318)
                      ..|...+..++|+|||++|+++ .|+.|.+||+....      ...++.......+..              .+.++.|+
T Consensus       117 ~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~------~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~S  189 (706)
T 2z3z_A          117 FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLG------EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWS  189 (706)
T ss_dssp             ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT------SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEEC
T ss_pred             cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccc------ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEEC
Confidence            3467789999999999999985 68999999986300      000122222222222              25789997


Q ss_pred             CCCCCcEEEEEE---------------------------------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC
Q psy2762          76 HPQFGTLLASCS---------------------------------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP  122 (318)
Q Consensus        76 ~~~~~~~las~s---------------------------------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p  122 (318)
                      +  ||++|++++                                 .+..|.+||+.+++.........|...+.+++|+|
T Consensus       190 p--Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp  267 (706)
T 2z3z_A          190 P--KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP  267 (706)
T ss_dssp             T--TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT
T ss_pred             C--CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC
Confidence            4  599999998                                 44789999998876433222224667899999999


Q ss_pred             CCCCcEEEEeecCC-----eEEEEEeecCCCCcceeeec--ccc---cccceeeeCC--CCCCCccccccCCCCCCccce
Q psy2762         123 KEFGLILACGSSDG-----TISFLTYMSDTNSWESRKIA--AHT---IGCNAVSWGP--GIGSLSELDLKGSKLGGVAKR  190 (318)
Q Consensus       123 ~~~~~~lasgs~d~-----~i~i~~~~~~~~~~~~~~~~--~h~---~~v~~~~~~p--~~~~~~~~~~~~~~~~~~~~~  190 (318)
                      +  +..+++++.++     .|.+||...+.   ....+.  .+.   ..+..+.|+|  +                 +++
T Consensus       268 d--g~~l~~~~~~~~~~~~~v~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~sp~~d-----------------g~~  325 (706)
T 2z3z_A          268 D--ENILYVAEVNRAQNECKVNAYDAETGR---FVRTLFVETDKHYVEPLHPLTFLPGSN-----------------NQF  325 (706)
T ss_dssp             T--SSEEEEEEECTTSCEEEEEEEETTTCC---EEEEEEEEECSSCCCCCSCCEECTTCS-----------------SEE
T ss_pred             C--CCEEEEEEeCCCCCeeEEEEEECCCCc---eeeEEEEccCCCeECccCCceeecCCC-----------------CEE
Confidence            9  66777777665     88889864431   122222  121   1246788998  6                 468


Q ss_pred             EEEecCCCeEEEEEcc-CCeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEEE-eCCC----eEEEEEcCCCcceeeEE
Q psy2762         191 LVSGGCDNLIKIWKQE-GDKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIASC-SQDR----KVIIWTSNDYVTWTPFI  263 (318)
Q Consensus       191 lasgs~d~~i~iwd~~-~~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~-s~D~----~i~vw~~~~~~~~~~~~  263 (318)
                      |++++.|+.++||+.+ .+.  ....+..|...+.. +.|+|+    +..|+.+ +.++    .|..|+..+..   ...
T Consensus       326 l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~  396 (706)
T 2z3z_A          326 IWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFAGFDPK----GTRLYFESTEASPLERHFYCIDIKGGK---TKD  396 (706)
T ss_dssp             EEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEEEECTT----SSEEEEEESSSCTTCBEEEEEETTCCC---CEE
T ss_pred             EEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeeeEEcCC----CCEEEEEecCCCCceEEEEEEEcCCCC---cee
Confidence            8999999999999876 333  23456677777877 899997    5555544 4444    56666765532   222


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCC----CeEEEEEECCC
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGD----NSVSLWKENTD  300 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D----~~v~iW~~~~~  300 (318)
                      + .+...+.+++|||||++|+.++.+    +.+.+|+...+
T Consensus       397 l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~  436 (706)
T 2z3z_A          397 L-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG  436 (706)
T ss_dssp             S-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred             c-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence            3 256679999999999998877544    46999997654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.85  E-value=1.9e-20  Score=172.72  Aligned_cols=203  Identities=13%  Similarity=0.060  Sum_probs=146.4

Q ss_pred             cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC-----------CcEEE---EEEecCCCcCeEEEEeeCCCCCcEEE--
Q psy2762          67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN-----------GNWFK---YYEYNNHDSSVNSIAWAPKEFGLILA--  130 (318)
Q Consensus        67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~-----------~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~la--  130 (318)
                      ..+..+++++  ++.++++++.|+ ++||+...           .....   ...+ .+...|.+++|+|+  +.+++  
T Consensus        37 ~~~n~lavs~--~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spd--g~~lav~  110 (434)
T 2oit_A           37 ERSSLLAVSN--KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCD--NLTLSAC  110 (434)
T ss_dssp             SCCBCEEEET--TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTT--SCEEEEE
T ss_pred             CCccEEEEec--CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCC--CCEEEEE
Confidence            3467788874  478899999888 88886421           01100   0111 35678999999998  56777  


Q ss_pred             --EeecCCeEEEEEeecC--------CCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeE
Q psy2762         131 --CGSSDGTISFLTYMSD--------TNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLI  200 (318)
Q Consensus       131 --sgs~d~~i~i~~~~~~--------~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i  200 (318)
                        +++.|+.|++||+...        ........+.+|...|.+++|+|+.                +.+||+++.|++|
T Consensus       111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~----------------~~~las~s~Dg~v  174 (434)
T 2oit_A          111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV----------------PSMVAVCLADGSI  174 (434)
T ss_dssp             EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC----------------TTEEEEEETTSCE
T ss_pred             EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC----------------CCEEEEEECCCeE
Confidence              7889999999997543        1001123345799999999999963                3689999999999


Q ss_pred             EEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-------CCcEEE
Q psy2762         201 KIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-------DDVVWN  273 (318)
Q Consensus       201 ~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-------~~~v~~  273 (318)
                      +|||++++..  .....+|...|++++|+|+    |.+|++++.|++|++||.+...   ...+..+       ...|.+
T Consensus       175 ~iwD~~~~~~--~~~~~~~~~~v~~v~wspd----g~~lasgs~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~  245 (434)
T 2oit_A          175 AVLQVTETVK--VCATLPSTVAVTSVCWSPK----GKQLAVGKQNGTVVQYLPTLQE---KKVIPCPPFYESDHPVRVLD  245 (434)
T ss_dssp             EEEEESSSEE--EEEEECGGGCEEEEEECTT----SSCEEEEETTSCEEEECTTCCE---EEEECCCTTCCTTSCEEEEE
T ss_pred             EEEEcCCCcc--eeeccCCCCceeEEEEcCC----CCEEEEEcCCCcEEEEccCCcc---cccccCCcccCCCCceeEEE
Confidence            9999987743  3344678899999999996    8899999999999999987321   1122222       237999


Q ss_pred             EEEcCCCCEEEEEe-CCC------eEEEEEECCC
Q psy2762         274 VSWSLTGDILTVSC-GDN------SVSLWKENTD  300 (318)
Q Consensus       274 v~~spdg~~l~s~~-~D~------~v~iW~~~~~  300 (318)
                      ++|++++.++++.+ .||      .+++|++...
T Consensus       246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             EEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            99999998876543 443      3899998753

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.85  E-value=8.5e-20  Score=178.67  Aligned_cols=241  Identities=10%  Similarity=0.064  Sum_probs=169.3

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      ..|.+++|+|||++|++++. ++|.+||+....         ...+..+..|...+.+++|++  +|++||+++ ++.|.
T Consensus       109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~---------~~~~~~l~~~~~~~~~~~~SP--DG~~la~~~-~~~i~  175 (741)
T 2ecf_A          109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEG---------KAAVRQLTHGEGFATDAKLSP--KGGFVSFIR-GRNLW  175 (741)
T ss_dssp             EESCCCEECTTSSEEEEEET-TEEEEEESSSCS---------TTSCCBCCCSSSCEEEEEECT--TSSEEEEEE-TTEEE
T ss_pred             cCcceeEECCCCCEEEEEeC-CcEEEEECCCCC---------cceEEEcccCCcccccccCCC--CCCEEEEEe-CCcEE
Confidence            34889999999999999886 999999986320         002345667888999999974  599999987 56999


Q ss_pred             EEeCCCCcEEEEEEecCCCcC----------------eEEEEeeCCCCCcEEEEeecCC---------------------
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSS----------------VNSIAWAPKEFGLILACGSSDG---------------------  136 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~----------------v~~v~~~p~~~~~~lasgs~d~---------------------  136 (318)
                      +||+.++....+  ...+...                +.+++|+|+  +..|++++.|+                     
T Consensus       176 ~~d~~~g~~~~~--~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpD--g~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~  251 (741)
T 2ecf_A          176 VIDLASGRQMQL--TADGSTTIGNGIAEFVADEEMDRHTGYWWAPD--DSAIAYARIDESPVPVQKRYEVYADRTDVIEQ  251 (741)
T ss_dssp             EEETTTTEEEEC--CCCCCSSEEESCCCHHHHHHSCCCCSEEECTT--SSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred             EEecCCCCEEEe--ccCCccceeccccceeeeeccccccceEECCC--CCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence            999987753322  2222222                478999999  66777776665                     


Q ss_pred             ------------eEEEEEeec-CCCCcceeeec---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEec-----
Q psy2762         137 ------------TISFLTYMS-DTNSWESRKIA---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-----  195 (318)
Q Consensus       137 ------------~i~i~~~~~-~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-----  195 (318)
                                  .|.+||... +.    ...+.   .|...+..++| |+                 +++|+.++     
T Consensus       252 ~~~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~-pD-----------------g~~l~~~~~~~~~  309 (741)
T 2ecf_A          252 RYPAAGDANVQVKLGVISPAEQAQ----TQWIDLGKEQDIYLARVNW-RD-----------------PQHLSFQRQSRDQ  309 (741)
T ss_dssp             ECCBTTSCCCEEEEEEECSSTTCC----CEEECCCSCSSEEEEEEEE-EE-----------------TTEEEEEEEETTS
T ss_pred             ecCCCCCCCCeeEEEEEECCCCCc----eEEecCCCCcceEEEEEEe-CC-----------------CCEEEEEEecccC
Confidence                        666776643 32    12222   46667888999 97                 46677554     


Q ss_pred             CCCeEEEEEccCCeEEEEEEcccCC-C---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         196 CDNLIKIWKQEGDKWIEETKLENHS-D---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~h~-~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      .+..|++||+.+++.....  ..+. .   .+..+.|+|+    |+++++++.|+.++||.......  ...+..+...|
T Consensus       310 ~~~~i~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~spd----g~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v  381 (741)
T 2ecf_A          310 KKLDLVEVTLASNQQRVLA--HETSPTWVPLHNSLRFLDD----GSILWSSERTGFQHLYRIDSKGK--AAALTHGNWSV  381 (741)
T ss_dssp             SEEEEEEEETTTCCEEEEE--EEECSSCCCCCSCCEECTT----SCEEEEECTTSSCEEEEECSSSC--EEESCCSSSCE
T ss_pred             CeEEEEEEECCCCceEEEE--EcCCCCcCCcCCceEECCC----CeEEEEecCCCccEEEEEcCCCC--eeeeeecceEE
Confidence            3568999999887654332  2332 2   3568999996    67899999999888887653221  34455666778


Q ss_pred             EEE-EEcCCCCEEEEEe-CCC--eEEEEEECCCC
Q psy2762         272 WNV-SWSLTGDILTVSC-GDN--SVSLWKENTDG  301 (318)
Q Consensus       272 ~~v-~~spdg~~l~s~~-~D~--~v~iW~~~~~~  301 (318)
                      .++ .|+|||+.|+.++ .|+  +++||+++..|
T Consensus       382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g  415 (741)
T 2ecf_A          382 DELLAVDEKAGLAYFRAGIESARESQIYAVPLQG  415 (741)
T ss_dssp             EEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred             EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence            887 5999999876554 455  89999988644

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.85  E-value=1.2e-19  Score=177.07  Aligned_cols=253  Identities=9%  Similarity=0.087  Sum_probs=164.9

Q ss_pred             ecCCCcc---eeeeeeecCCCCEEEEeeCC---------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEec
Q psy2762           8 VDTGHED---MIHDAEMDYLGLYLATCSSD---------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA   75 (318)
Q Consensus         8 ~~~gH~~---~v~~~~~~~~g~~l~s~s~D---------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~   75 (318)
                      +..+|..   .|.+++|||||++|++++.+         +.+.+||++..         ....+....+|...+..++|+
T Consensus        52 ~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~---------~~~~l~~~~~~~~~~~~~~~S  122 (723)
T 1xfd_A           52 LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG---------DPQSLDPPEVSNAKLQYAGWG  122 (723)
T ss_dssp             EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC---------CCEECCCTTCCSCCCSBCCBC
T ss_pred             EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC---------ceEeccCCccccccccccEEC
Confidence            4455654   49999999999999999875         77889998732         112233334566668899997


Q ss_pred             CCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcC------------------eEEEEeeCCCCCcEEEEeecCC-
Q psy2762          76 HPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS------------------VNSIAWAPKEFGLILACGSSDG-  136 (318)
Q Consensus        76 ~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~------------------v~~v~~~p~~~~~~lasgs~d~-  136 (318)
                      +  +|++||+++. +.|.+||+.+++...+.  ..+...                  +.+++|+||  +..|++++.|+ 
T Consensus       123 P--dG~~la~~~~-~~i~~~~~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD--g~~la~~~~~~~  195 (723)
T 1xfd_A          123 P--KGQQLIFIFE-NNIYYCAHVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD--GTRLAYAAINDS  195 (723)
T ss_dssp             S--STTCEEEEET-TEEEEESSSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT--SSEEEEEEEECT
T ss_pred             C--CCCEEEEEEC-CeEEEEECCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECCC--CCEEEEEEECCC
Confidence            4  5999999886 89999999877644432  222322                  378999999  66777776543 


Q ss_pred             ---------------------------------eEEEEEeecCCCCcceeeecc------cccccceeeeCCCCCCCccc
Q psy2762         137 ---------------------------------TISFLTYMSDTNSWESRKIAA------HTIGCNAVSWGPGIGSLSEL  177 (318)
Q Consensus       137 ---------------------------------~i~i~~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~~~~  177 (318)
                                                       .|.+||......   ...+..      +...+..++|+|+       
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpD-------  265 (723)
T 1xfd_A          196 RVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATS-------  265 (723)
T ss_dssp             TSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSS-------
T ss_pred             ccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCC-------
Confidence                                             677887644321   122332      2456778999997       


Q ss_pred             cccCCCCCCccceEEEec----CCCeEEEEEccCCeEEEEEEcccCCCCee----EEEEccCCCCCccEEEE--EeCCC-
Q psy2762         178 DLKGSKLGGVAKRLVSGG----CDNLIKIWKQEGDKWIEETKLENHSDWVR----DVAWAPSWGLSKCMIAS--CSQDR-  246 (318)
Q Consensus       178 ~~~~~~~~~~~~~lasgs----~d~~i~iwd~~~~~~~~~~~~~~h~~~V~----~v~~sp~~~~~~~~l~s--~s~D~-  246 (318)
                                +++|++.+    .+..|++||+.+++...... ..+..++.    .+.|+|+    |+.|+.  ...|+ 
T Consensus       266 ----------g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~  330 (723)
T 1xfd_A          266 ----------TKVAVTWLNRAQNVSILTLCDATTGVCTKKHE-DESEAWLHRQNEEPVFSKD----GRKFFFIRAIPQGG  330 (723)
T ss_dssp             ----------SEEEEEEEETTSCEEEEEEEETTTCCEEEEEE-EECSSCCCCCCCCCEECTT----SCSEEEEEEECCSS
T ss_pred             ----------CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE-eccCCEEeccCCCceEcCC----CCeEEEEEecccCC
Confidence                      45665554    33579999998876543322 23444443    7899997    665554  55677 


Q ss_pred             -----eEEEEE-cCCCcceeeEEeeecCCcEEE-EEEcCCCCEEEEEeCC---CeEEEEEECCCC
Q psy2762         247 -----KVIIWT-SNDYVTWTPFIMNTFDDVVWN-VSWSLTGDILTVSCGD---NSVSLWKENTDG  301 (318)
Q Consensus       247 -----~i~vw~-~~~~~~~~~~~~~~~~~~v~~-v~~spdg~~l~s~~~D---~~v~iW~~~~~~  301 (318)
                           .|.+|+ ..+........+......+.. ++|+|||+.|+.++.+   +.++||+++..+
T Consensus       331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~  395 (723)
T 1xfd_A          331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG  395 (723)
T ss_dssp             SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred             CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence                 466666 333220001222222233444 7999999999876655   789999998754

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.85  E-value=3.3e-18  Score=151.89  Aligned_cols=245  Identities=9%  Similarity=0.032  Sum_probs=166.5

Q ss_pred             cceeeeeeecCCCCEEEEeeC-------CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCc-EEE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSS-------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGT-LLA   84 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~-------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~-~la   84 (318)
                      ...+..++|+|+|++|+.++.       ++.|.+||..           +++.+..+.. ...+..++|++  +++ +++
T Consensus        40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~-----------~~~~~~~~~~-~~~~~~~~~s~--dg~~l~v  105 (353)
T 3vgz_A           40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV-----------TLEVTQAIHN-DLKPFGATINN--TTQTLWF  105 (353)
T ss_dssp             ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT-----------TCCEEEEEEE-SSCCCSEEEET--TTTEEEE
T ss_pred             ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC-----------CCeEEEEEec-CCCcceEEECC--CCCEEEE
Confidence            346788999999999888774       5689999986           2455555553 34467888874  466 455


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCC-------cCeEEEEeeCCCCCcEEEEe-ecCCeEEEEEeecCCCCcceeeec
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHD-------SSVNSIAWAPKEFGLILACG-SSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~-------~~v~~v~~~p~~~~~~lasg-s~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                      +...++.|.+||+.+++...........       ..+.+++|+|++ ..++++. ..++.|.+||.....   ....+.
T Consensus       106 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~  181 (353)
T 3vgz_A          106 GNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIK---LKTAIQ  181 (353)
T ss_dssp             EETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTE---EEEEEC
T ss_pred             EecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCc---eEEEec
Confidence            5566899999999888754544332111       126889999984 2334343 357889999864322   122233


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc--ccCCCCeeEEEEccCCCC
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL--ENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~--~~h~~~V~~v~~sp~~~~  234 (318)
                      .+...+..++|+|+                 +.+|++++.++.|.+||..+++.......  .++...+.+++|+|+   
T Consensus       182 ~~~~~~~~~~~s~d-----------------g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---  241 (353)
T 3vgz_A          182 NTGKMSTGLALDSE-----------------GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA---  241 (353)
T ss_dssp             CCCTTCCCCEEETT-----------------TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT---
T ss_pred             CCCCccceEEECCC-----------------CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC---
Confidence            34445678889987                 46788888899999999988865443332  235566889999997   


Q ss_pred             CccEEEEE-eCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCC
Q psy2762         235 SKCMIASC-SQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTD  300 (318)
Q Consensus       235 ~~~~l~s~-s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~  300 (318)
                       +.+|+.+ ..++.|.+||..+...  ..... ...+ ..++|+|||++|+.++ .++.|.+||...+
T Consensus       242 -g~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~  304 (353)
T 3vgz_A          242 -RQRAFITDSKAAEVLVVDTRNGNI--LAKVA-APES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSY  304 (353)
T ss_dssp             -TTEEEEEESSSSEEEEEETTTCCE--EEEEE-CSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred             -CCEEEEEeCCCCEEEEEECCCCcE--EEEEE-cCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence             5544444 4569999999976542  12222 1222 5799999999766665 6899999997664

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.85  E-value=2.6e-18  Score=152.96  Aligned_cols=244  Identities=13%  Similarity=0.123  Sum_probs=158.3

Q ss_pred             eCCCcEEEEEcCCCcCCCCCCCCcceEEE-EecccccCeEEEEecCCCCCcEEEEEEC---CCeEEEEeCCCCcEEEEEE
Q psy2762          32 SSDHTVKVFNLDRNLKKDDSHSQKGTLIA-ELKGHSGPVWQVAWAHPQFGTLLASCSY---DRKVIIWRGDNGNWFKYYE  107 (318)
Q Consensus        32 s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~~~~~~~~~las~s~---Dg~v~vWd~~~~~~~~~~~  107 (318)
                      +.++.|.+|+++..         ++++.. ....+...+..++|++  +|+ |++++.   ++.|.+|++.++.......
T Consensus        13 ~~~~~i~v~~~d~~---------tg~~~~~~~~~~~~~p~~~a~sp--dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~   80 (347)
T 3hfq_A           13 KTSQGIYQGTLDTT---------AKTLTNDGLLAATQNPTYLALSA--KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT   80 (347)
T ss_dssp             SSCCEEEEEEEETT---------TTEEEEEEEEEECSCCCCEEECT--TCE-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred             CCCCCEEEEEEcCC---------CCeEEEeeeeeccCCcceEEEcc--CCe-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence            34678999988621         344322 3345567778899974  477 555544   6899999997766444444


Q ss_pred             ecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecc---------cccccceeeeCCCCCCCccc
Q psy2762         108 YNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAA---------HTIGCNAVSWGPGIGSLSEL  177 (318)
Q Consensus       108 ~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~---------h~~~v~~~~~~p~~~~~~~~  177 (318)
                      +..+...+..++|+|+  +.++++++ .++.|.+|++...........+..         +...+..++|+|+       
T Consensus        81 ~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-------  151 (347)
T 3hfq_A           81 VVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-------  151 (347)
T ss_dssp             EEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-------
T ss_pred             eecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCC-------
Confidence            4456677899999998  55566655 789999999853221111111111         1113567899997       


Q ss_pred             cccCCCCCCccceEEEecCCCeEEEEEcc-CCeEEEEEEcccC-CCCeeEEEEccCCCCCccE-EEEEeCCCeEEEEEcC
Q psy2762         178 DLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKWIEETKLENH-SDWVRDVAWAPSWGLSKCM-IASCSQDRKVIIWTSN  254 (318)
Q Consensus       178 ~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~-l~s~s~D~~i~vw~~~  254 (318)
                                ++.+++...++.|++|++. +++......+..+ ...+..++|+|+    |++ +++...++.|++|++.
T Consensus       152 ----------g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd----g~~l~v~~~~~~~v~v~~~~  217 (347)
T 3hfq_A          152 ----------NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD----GQYAFLAGELSSQIASLKYD  217 (347)
T ss_dssp             ----------SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT----SSEEEEEETTTTEEEEEEEE
T ss_pred             ----------CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC----CCEEEEEeCCCCEEEEEEec
Confidence                      3567777888999999987 4544333332222 235788999997    664 4555678999999986


Q ss_pred             CCc-ce-eeEEeeecC------CcEEEEEEcCCCCEE-EEEeCCCeEEEEEECCCCceEEEeeec
Q psy2762         255 DYV-TW-TPFIMNTFD------DVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       255 ~~~-~~-~~~~~~~~~------~~v~~v~~spdg~~l-~s~~~D~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      ... .. .........      ..+..++|+|||++| ++...++.|++|+++..|.+..+..+.
T Consensus       218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~  282 (347)
T 3hfq_A          218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS  282 (347)
T ss_dssp             TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE
T ss_pred             CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe
Confidence            421 11 111122221      358899999999987 455568999999998766666665543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.84  E-value=1.9e-19  Score=182.96  Aligned_cols=236  Identities=11%  Similarity=0.027  Sum_probs=182.1

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----------cccCeEEEEec-CC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----------HSGPVWQVAWA-HP   77 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~V~~v~~~-~~   77 (318)
                      .+|. .+...+|+|+|++|+.+. |+.|.+||+..           .. +..+.+           |.+.|.+++|+ + 
T Consensus       242 ~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~-----------~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-  306 (1045)
T 1k32_A          242 TSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDT-----------EK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL-  306 (1045)
T ss_dssp             CCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTT-----------CC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-
T ss_pred             cCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCc-----------eE-eeeeccCcccccccccccccccceeeecCC-
Confidence            3444 466779999999999874 89999999841           11 224443           56679999997 5 


Q ss_pred             CCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc-CeEEEEeeCCCCCcEEEEeecCCeEE-EEEeecCCCCcceeee
Q psy2762          78 QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS-SVNSIAWAPKEFGLILACGSSDGTIS-FLTYMSDTNSWESRKI  155 (318)
Q Consensus        78 ~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~~lasgs~d~~i~-i~~~~~~~~~~~~~~~  155 (318)
                       +|++|++++ ++.|.+|+...+...   .+..|.. .+..++|+ +  +..++.++.+..+. +|+....    ....+
T Consensus       307 -dG~~la~~~-~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~----~~~~l  374 (1045)
T 1k32_A          307 -DGDLIAFVS-RGQAFIQDVSGTYVL---KVPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTG----KAEKF  374 (1045)
T ss_dssp             -GGGCEEEEE-TTEEEEECTTSSBEE---ECSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTC----CEEEC
T ss_pred             -CCCEEEEEE-cCEEEEEcCCCCceE---EccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCC----CceEe
Confidence             489999988 889999998876532   3556777 89999999 7  67788888777776 7775322    23344


Q ss_pred             cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         156 AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       156 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      .+|...+..++|+|+                 +++||+++.++.|++||+.+++...  .+.+|...+.+++|||+    
T Consensus       375 ~~~~~~~~~~~~SpD-----------------G~~la~~~~~~~v~~~d~~tg~~~~--~~~~~~~~v~~~~~SpD----  431 (1045)
T 1k32_A          375 EENLGNVFAMGVDRN-----------------GKFAVVANDRFEIMTVDLETGKPTV--IERSREAMITDFTISDN----  431 (1045)
T ss_dssp             CCCCCSEEEEEECTT-----------------SSEEEEEETTSEEEEEETTTCCEEE--EEECSSSCCCCEEECTT----
T ss_pred             cCCccceeeeEECCC-----------------CCEEEEECCCCeEEEEECCCCceEE--eccCCCCCccceEECCC----
Confidence            467778889999997                 5789999999999999998876433  34578888999999996    


Q ss_pred             ccEEEEEeCCC----------eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         236 KCMIASCSQDR----------KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       236 ~~~l~s~s~D~----------~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      |++|++++.++          .|++||+.+..   ...+..+...+.+++|+|||++|+.++.++..++|+..
T Consensus       432 G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~  501 (1045)
T 1k32_A          432 SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV  501 (1045)
T ss_dssp             SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred             CCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence            88888887754          89999998643   34555677788999999999999999998888888743

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.84  E-value=1.9e-19  Score=175.34  Aligned_cols=241  Identities=12%  Similarity=0.097  Sum_probs=162.9

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccc-----------------cCeEEEEecC
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHS-----------------GPVWQVAWAH   76 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~-----------------~~V~~v~~~~   76 (318)
                      .+..+.|.  |..+++++.|+ | +||+.++           +.+ ..+..|.                 ..|.+++|++
T Consensus        27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg-----------~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp   91 (706)
T 2z3z_A           27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANG-----------KSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG   91 (706)
T ss_dssp             -CTTCEEE--TTEEEEEETTE-E-EEEC------------------CEEEEHHHHHTTC-----------CCCEEEEETT
T ss_pred             cCCCCcCc--CCeEEEEeCCc-E-EEECCCC-----------cEeeEEeechhHhhhhccchhccccccccCceeEEECC
Confidence            35567777  67777788888 8 9998632           221 2333333                 5699999974


Q ss_pred             CCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec-----CCCCcc
Q psy2762          77 PQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS-----DTNSWE  151 (318)
Q Consensus        77 ~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~-----~~~~~~  151 (318)
                        ++.++++  .|++|.+||+.+++...   +..+...+.+++|+|+  +..+++ ..|+.|.+|+...     +.    
T Consensus        92 --d~~~~~~--~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~Spd--G~~la~-~~~~~i~v~~~~~~~~~~g~----  157 (706)
T 2z3z_A           92 --RGLVVLF--TQGGLVGFDMLARKVTY---LFDTNEETASLDFSPV--GDRVAY-VRNHNLYIARGGKLGEGMSR----  157 (706)
T ss_dssp             --TTEEEEE--ETTEEEEEETTTTEEEE---EECCTTCCTTCEECTT--SSEEEE-EETTEEEEEECBCTTSCCCC----
T ss_pred             --CCeEEEE--ECCEEEEEECCCCceEE---ccCCcccccCCcCCCC--CCEEEE-EECCeEEEEecCcccccCCC----
Confidence              3444444  46999999998875333   3346677889999999  667777 4689999999865     32    


Q ss_pred             eeeec-ccccc--------------cceeeeCCCCCCCccccccCCCCCCccceEEEec---------------------
Q psy2762         152 SRKIA-AHTIG--------------CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG---------------------  195 (318)
Q Consensus       152 ~~~~~-~h~~~--------------v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs---------------------  195 (318)
                      ...+. .+...              +..+.|+|+                 +++|++++                     
T Consensus       158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD-----------------g~~la~~~~d~~~~~~~~~~~~~~~~~~~  220 (706)
T 2z3z_A          158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK-----------------GSCLAFYRMDQSMVKPTPIVDYHPLEAES  220 (706)
T ss_dssp             CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT-----------------SSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred             cEEeccCCCCCeEcccchhhhhcCCCceEEECCC-----------------CCEEEEEEECCCCCceEEeeccCCCCCce
Confidence            11221 22221              478899997                 46777776                     


Q ss_pred             ------------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCcc
Q psy2762         196 ------------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYVT  258 (318)
Q Consensus       196 ------------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~~  258 (318)
                                  .+..|++||+.+++.........|...+.+++|+|+    |+.|++++.|+     .|++||+.+...
T Consensus       221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~v~~~d~~~g~~  296 (706)
T 2z3z_A          221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD----ENILYVAEVNRAQNECKVNAYDAETGRF  296 (706)
T ss_dssp             EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT----SSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred             EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC----CCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence                        456799999988865333222357778999999996    88899888876     899999987521


Q ss_pred             eeeEEeeecCC---cEEEEEEcC--CCCEEEEEeCCCeEEEEEECC-CCceEE
Q psy2762         259 WTPFIMNTFDD---VVWNVSWSL--TGDILTVSCGDNSVSLWKENT-DGAWQC  305 (318)
Q Consensus       259 ~~~~~~~~~~~---~v~~v~~sp--dg~~l~s~~~D~~v~iW~~~~-~~~~~~  305 (318)
                      ...........   .+.+++|+|  ||++|+++..|+.++||..+. ++....
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~  349 (706)
T 2z3z_A          297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ  349 (706)
T ss_dssp             EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE
T ss_pred             eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe
Confidence            11111112222   346789999  999999999999999999874 433433

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.84  E-value=1.4e-19  Score=183.84  Aligned_cols=239  Identities=8%  Similarity=0.019  Sum_probs=180.3

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+|...+.++.|+++ .++++++.|++++||.++..          +.....+..|. .+...+|++  +|++|+++ .+
T Consensus       200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~----------g~~~~~l~~~~-~~~~~~~Sp--DG~~la~~-~~  264 (1045)
T 1k32_A          200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD----------GKDLRKHTSFT-DYYPRHLNT--DGRRILFS-KG  264 (1045)
T ss_dssp             ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT----------SCSCEECCCCC-SSCEEEEEE--SSSCEEEE-ET
T ss_pred             cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCC----------CCcceEecCCC-CcceeeEcC--CCCEEEEE-eC
Confidence            689999999999998 67778888999999987521          22234555565 356678874  58888887 48


Q ss_pred             CeEEEEeCCCCcEEEEEEecC-----------CCcCeEEEEee-CCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNN-----------HDSSVNSIAWA-PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~-----------h~~~v~~v~~~-p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      +.|.+|++..... .  .+..           |...+.+++|+ |+  +..+++++ ++.|.+|+....    ....+..
T Consensus       265 ~~i~~~d~~~~~l-~--~l~~~~~~~~~~~~~~~~~v~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~----~~~~~~~  334 (1045)
T 1k32_A          265 GSIYIFNPDTEKI-E--KIEIGDLESPEDRIISIPSKFAEDFSPLD--GDLIAFVS-RGQAFIQDVSGT----YVLKVPE  334 (1045)
T ss_dssp             TEEEEECTTTCCE-E--ECCCCCCCBCCSEEEECGGGGEEEEEECG--GGCEEEEE-TTEEEEECTTSS----BEEECSC
T ss_pred             CEEEEecCCceEe-e--eeccCcccccccccccccccceeeecCCC--CCEEEEEE-cCEEEEEcCCCC----ceEEccC
Confidence            9999999854432 2  3333           33468999999 98  66777776 788888875322    2334556


Q ss_pred             ccc-ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEE-EEEccCCeEEEEEEcccCCCCeeEEEEccCCCCC
Q psy2762         158 HTI-GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIK-IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       158 h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~-iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~  235 (318)
                      |.. .+..++|+ +                 ++.|+.++.++.+. +|+..+++..   .+.+|...+..++|+|+    
T Consensus       335 ~~~~~~~~~~~s-d-----------------g~~l~~~s~~~~l~~~~d~~~~~~~---~l~~~~~~~~~~~~SpD----  389 (1045)
T 1k32_A          335 PLRIRYVRRGGD-T-----------------KVAFIHGTREGDFLGIYDYRTGKAE---KFEENLGNVFAMGVDRN----  389 (1045)
T ss_dssp             CSCEEEEEECSS-S-----------------EEEEEEEETTEEEEEEEETTTCCEE---ECCCCCCSEEEEEECTT----
T ss_pred             CCcceEEeeeEc-C-----------------CCeEEEEECCCceEEEEECCCCCce---EecCCccceeeeEECCC----
Confidence            666 77888888 6                 56788888888888 9998876532   34478888999999996    


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC----------eEEEEEECCC
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN----------SVSLWKENTD  300 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~----------~v~iW~~~~~  300 (318)
                      |.+|++++.|+.|++||+.+...  ......+...|.+++|||||++|++++.++          .|++||+..+
T Consensus       390 G~~la~~~~~~~v~~~d~~tg~~--~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g  462 (1045)
T 1k32_A          390 GKFAVVANDRFEIMTVDLETGKP--TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR  462 (1045)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCE--EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred             CCEEEEECCCCeEEEEECCCCce--EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence            88999999999999999987542  233446778899999999999999887654          9999997653

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.84  E-value=5.1e-18  Score=149.67  Aligned_cols=247  Identities=9%  Similarity=0.061  Sum_probs=160.4

Q ss_pred             eeecCCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-CCeEEEEe
Q psy2762          19 AEMDYLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-DRKVIIWR   96 (318)
Q Consensus        19 ~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-Dg~v~vWd   96 (318)
                      +.|.+++++ +++++.+++|++||++           +++.+..+..+...+ .++|++  ++++|+.++. ++.|.+||
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d   68 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTD-----------TLEILNQITLGYDFV-DTAITS--DCSNVVVTSDFCQTLVQIE   68 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETT-----------TCCEEEEEECCCCEE-EEEECS--SSCEEEEEESTTCEEEEEE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCc-----------ccceeeeEEccCCcc-eEEEcC--CCCEEEEEeCCCCeEEEEE
Confidence            346665555 7788899999999986           345666666666667 999974  4776666655 89999999


Q ss_pred             CCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---eEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +.+++.. ...+..+..+..+++|+|+  +.+++++..++   .|.+||.....   ....+ .+......++|+|+.  
T Consensus        69 ~~~~~~~-~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~---~~~~~-~~~~~~~~~~~spdg--  139 (331)
T 3u4y_A           69 TQLEPPK-VVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNK---FISTI-PIPYDAVGIAISPNG--  139 (331)
T ss_dssp             CSSSSCE-EEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTE---EEEEE-ECCTTEEEEEECTTS--
T ss_pred             CCCCcee-EEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCC---eEEEE-ECCCCccceEECCCC--
Confidence            9887641 2234445556655999998  56666555553   89999874332   12222 223345789999973  


Q ss_pred             CccccccCCCCCCccceEEEecCCCe-EEEEEccCCeEE-EE-EEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNL-IKIWKQEGDKWI-EE-TKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVI  249 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~-i~iwd~~~~~~~-~~-~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~  249 (318)
                                    ...+++...++. |++|++...... .. .........+..+.|+|+    ++ +++++..++.|+
T Consensus       140 --------------~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd----g~~l~v~~~~~~~v~  201 (331)
T 3u4y_A          140 --------------NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD----GNFAFVANLIGNSIG  201 (331)
T ss_dssp             --------------SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT----SSEEEEEETTTTEEE
T ss_pred             --------------CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCC----CCEEEEEeCCCCeEE
Confidence                          124555566678 999997643211 11 111133445799999997    65 455566799999


Q ss_pred             EEEcCCCccee-eEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEEEee
Q psy2762         250 IWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       250 vw~~~~~~~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      +|++....... ...+. ....+..++|+|||++|+.++ .++.|.+||... ++...+..
T Consensus       202 v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~-~~~~~~~~  260 (331)
T 3u4y_A          202 ILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS-GTLSFVKS  260 (331)
T ss_dssp             EEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTT-TEEEEEEE
T ss_pred             EEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCC-Cceeeecc
Confidence            99987654211 22222 345678999999999776665 578999999765 45444443

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.84  E-value=5e-18  Score=152.67  Aligned_cols=250  Identities=10%  Similarity=0.070  Sum_probs=161.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc--cCeEEEEecCCCCCc--EEEEEE
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS--GPVWQVAWAHPQFGT--LLASCS   87 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~~~~~~~--~las~s   87 (318)
                      +...+..++|+|+|++|++++.+ +|.+|+++.          .+++..... |.  +.+.+++|++  +|+  ++++++
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~----------~g~~~~~~~-~~~~g~~~~~~~sp--dg~~l~~~~~~  103 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKS----------PTEIVHEAS-HPIGGHPRANDADT--NTRAIFLLAAK  103 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEE----------TTEEEEEEE-EECCSSGGGGCTTS--CCEEEEEEECS
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECC----------CCCEEEeeE-eecCCCCccEEECC--CCCEEEEEEec
Confidence            34467889999999999999988 999999851          133332222 21  3355678864  577  355653


Q ss_pred             -------------CCCeEEEEeCCC-CcEEEEEE-ec-CCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEee-cCCCC
Q psy2762          88 -------------YDRKVIIWRGDN-GNWFKYYE-YN-NHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYM-SDTNS  149 (318)
Q Consensus        88 -------------~Dg~v~vWd~~~-~~~~~~~~-~~-~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~-~~~~~  149 (318)
                                   .++++.+|++.. +....... +. .+...+.+++|+|+  +.+++++. .++.|.+|++. .+.  
T Consensus       104 ~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~--  179 (365)
T 1jof_A          104 QPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGE--  179 (365)
T ss_dssp             STTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSC--
T ss_pred             CCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCC--
Confidence                         699999999863 44332222 11 24567899999999  55555544 46799999985 222  


Q ss_pred             cc-eeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CCeEEEEEcc--CCeEEE----EEEcc--
Q psy2762         150 WE-SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQE--GDKWIE----ETKLE--  217 (318)
Q Consensus       150 ~~-~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~--~~~~~~----~~~~~--  217 (318)
                      .. ...+.  .|...+..++|+|+                 +++|+++++ ++.|++|+.+  ++++..    ...+.  
T Consensus       180 ~~~~~~~~~~~~g~~p~~~~~spd-----------------g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~  242 (365)
T 1jof_A          180 VELVGSVDAPDPGDHPRWVAMHPT-----------------GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG  242 (365)
T ss_dssp             EEEEEEEECSSTTCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred             EEEeeeEecCCCCCCCCEeEECCC-----------------CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence            11 11222  23456778899997                 456666654 7899999865  444321    12222  


Q ss_pred             --cCCC------CeeEEE-EccCCCCCccEEEEEeCCC------eEEEEEcCCCcceee-E-EeeecCCcEEEEEEcC--
Q psy2762         218 --NHSD------WVRDVA-WAPSWGLSKCMIASCSQDR------KVIIWTSNDYVTWTP-F-IMNTFDDVVWNVSWSL--  278 (318)
Q Consensus       218 --~h~~------~V~~v~-~sp~~~~~~~~l~s~s~D~------~i~vw~~~~~~~~~~-~-~~~~~~~~v~~v~~sp--  278 (318)
                        +|..      .+..++ |+|+    |++|+++..+.      +|++|++........ . ....+...+..++|+|  
T Consensus       243 ~~g~~~~~~~~~~~~~i~~~spd----G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~  318 (365)
T 1jof_A          243 IPDRDPETGKGLYRADVCALTFS----GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP  318 (365)
T ss_dssp             CCCBCTTTSSBSEEEEEEEECTT----SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred             cCCcccccccccccccEEEECCC----CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence              2332      588999 9996    77776665432      899999863211111 1 1222344566899999  


Q ss_pred             -CCCEEEEEeCC-CeEEEEEECCC
Q psy2762         279 -TGDILTVSCGD-NSVSLWKENTD  300 (318)
Q Consensus       279 -dg~~l~s~~~D-~~v~iW~~~~~  300 (318)
                       ||++|++++.+ ++|++|+++..
T Consensus       319 ~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          319 WSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCEEEEEEcCCCeEEEEEEchh
Confidence             89999999874 89999998775

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.82  E-value=2.5e-17  Score=146.16  Aligned_cols=229  Identities=11%  Similarity=0.079  Sum_probs=157.4

Q ss_pred             ceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC---------eEEEEecCCCCCcEE
Q psy2762          14 DMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP---------VWQVAWAHPQFGTLL   83 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~---------V~~v~~~~~~~~~~l   83 (318)
                      ..+..++|+|+|+++ +++..++.|.+||..           +++.+..+..+...         +.++.|++  +++++
T Consensus        89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l  155 (353)
T 3vgz_A           89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAK-----------TGEVKGRLVLDDRKRTEEVRPLQPRELVADD--ATNTV  155 (353)
T ss_dssp             SCCCSEEEETTTTEEEEEETTTTEEEEEETT-----------TCCEEEEEESCCCCCCSSCCCCEEEEEEEET--TTTEE
T ss_pred             CCcceEEECCCCCEEEEEecCCCEEEEEeCC-----------CCeeEEEEecCCCccccccCCCCCceEEECC--CCCEE
Confidence            347789999999955 455668999999986           34556666654432         68899974  47767


Q ss_pred             EEEE--CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec----c
Q psy2762          84 ASCS--YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA----A  157 (318)
Q Consensus        84 as~s--~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~----~  157 (318)
                      +.++  .++.|.+||..+++...  .+..+...+.+++|+|+  +..+++++.++.|.+||.....   ....+.    +
T Consensus       156 ~~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~  228 (353)
T 3vgz_A          156 YISGIGKESVIWVVDGGNIKLKT--AIQNTGKMSTGLALDSE--GKRLYTTNADGELITIDTADNK---ILSRKKLLDDG  228 (353)
T ss_dssp             EEEEESSSCEEEEEETTTTEEEE--EECCCCTTCCCCEEETT--TTEEEEECTTSEEEEEETTTTE---EEEEEECCCSS
T ss_pred             EEEecCCCceEEEEcCCCCceEE--EecCCCCccceEEECCC--CCEEEEEcCCCeEEEEECCCCe---EEEEEEcCCCC
Confidence            6665  48899999998876433  34435556889999998  5667777889999999864332   112222    1


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCc
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~  236 (318)
                      +...+..++|+|+.                 .+ +++...++.|.+||..+++.......  ..  ...+.|+|+    +
T Consensus       229 ~~~~~~~~~~s~dg-----------------~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~--~~~~~~s~d----g  283 (353)
T 3vgz_A          229 KEHFFINISLDTAR-----------------QRAFITDSKAAEVLVVDTRNGNILAKVAA--PE--SLAVLFNPA----R  283 (353)
T ss_dssp             SCCCEEEEEEETTT-----------------TEEEEEESSSSEEEEEETTTCCEEEEEEC--SS--CCCEEEETT----T
T ss_pred             CCcccceEEECCCC-----------------CEEEEEeCCCCEEEEEECCCCcEEEEEEc--CC--CceEEECCC----C
Confidence            33345668899873                 44 44455569999999988765444332  22  257999997    5


Q ss_pred             c-EEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         237 C-MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       237 ~-~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      . ++++...++.|.+||..+...  ...+ .....+.+++|+|||++|+.+..++
T Consensus       284 ~~l~v~~~~~~~v~~~d~~~~~~--~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          284 NEAYVTHRQAGKVSVIDAKSYKV--VKTF-DTPTHPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             TEEEEEETTTTEEEEEETTTTEE--EEEE-ECCSEEEEEEECTTSCEEEEEEECC
T ss_pred             CEEEEEECCCCeEEEEECCCCeE--EEEE-ecCCCCCeEEEcCCCCEEEEEEccc
Confidence            5 555555799999999876431  1222 2345789999999999877776653

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.81  E-value=1.7e-16  Score=141.99  Aligned_cols=255  Identities=13%  Similarity=0.079  Sum_probs=161.4

Q ss_pred             eeecCCCCEEEEee----CCCcEEEEEcCCCcCCCCCCCCcce--EEEEecccccCeEEEEecCCCCCcEEEEEECC---
Q psy2762          19 AEMDYLGLYLATCS----SDHTVKVFNLDRNLKKDDSHSQKGT--LIAELKGHSGPVWQVAWAHPQFGTLLASCSYD---   89 (318)
Q Consensus        19 ~~~~~~g~~l~s~s----~D~~v~vwd~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D---   89 (318)
                      .+..+...+++.|+    .++.|.+|.++..         +++  .+..+  |...+..++|++  ++++|++++.+   
T Consensus         7 ~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~---------~g~~~~~~~~--~~~~p~~l~~sp--dg~~l~~~~~~~~~   73 (361)
T 3scy_A            7 PSTTDSELTMLVGTYTSGNSKGIYTFRFNEE---------TGESLPLSDA--EVANPSYLIPSA--DGKFVYSVNEFSKD   73 (361)
T ss_dssp             CCGGGGEEEEEEEECCSSSCCEEEEEEEETT---------TCCEEEEEEE--ECSCCCSEEECT--TSSEEEEEECCSST
T ss_pred             hhhCCCceEEEEEeccCCCCCCEEEEEEeCC---------CCCEEEeecc--cCCCCceEEECC--CCCEEEEEEccCCC
Confidence            33444455666664    4678999988521         233  23333  777788899974  58999999986   


Q ss_pred             -CeEEEEeCCC--CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc--------
Q psy2762          90 -RKVIIWRGDN--GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH--------  158 (318)
Q Consensus        90 -g~v~vWd~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h--------  158 (318)
                       +.|.+|++..  +..........+......+++  +. ..++++...++.|.+|++..............+        
T Consensus        74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~  150 (361)
T 3scy_A           74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKE  150 (361)
T ss_dssp             TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTT
T ss_pred             CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcc
Confidence             8999998765  444444444445566777887  42 334444456889999998543211111111111        


Q ss_pred             ---ccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCe-------EE-----EEEEcccCCCC
Q psy2762         159 ---TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDK-------WI-----EETKLENHSDW  222 (318)
Q Consensus       159 ---~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~-------~~-----~~~~~~~h~~~  222 (318)
                         ...+..++|+|+                 +++ +++...++.|++|++....       +.     .... ..+...
T Consensus       151 ~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~  212 (361)
T 3scy_A          151 RQTMPHLHCVRITPD-----------------GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSG  212 (361)
T ss_dssp             TCSSCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCC
T ss_pred             ccCCCcceEEEECCC-----------------CCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCC
Confidence               112356889997                 344 4555568899999876432       21     1122 234455


Q ss_pred             eeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCcceeeEEee---ecCCcEEEEEEcCCCCEEEEEeCC--CeEEEEE
Q psy2762         223 VRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMN---TFDDVVWNVSWSLTGDILTVSCGD--NSVSLWK  296 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~---~~~~~v~~v~~spdg~~l~s~~~D--~~v~iW~  296 (318)
                      ++.++|+|+    +++|+.++ .++.|++|++............   .+...+..++|+|||++|+++..+  ++|++|+
T Consensus       213 ~~~~~~spd----g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~  288 (361)
T 3scy_A          213 PRHLIFNSD----GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK  288 (361)
T ss_dssp             EEEEEECTT----SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             CeEEEEcCC----CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence            789999996    77676666 6999999998753211111121   122446899999999999777665  8999999


Q ss_pred             EC-CCCceEEEeeecc
Q psy2762         297 EN-TDGAWQCITEMGK  311 (318)
Q Consensus       297 ~~-~~~~~~~~~~~~~  311 (318)
                      ++ .+|.+..+..+..
T Consensus       289 ~~~~~g~~~~~~~~~~  304 (361)
T 3scy_A          289 VDETNGTLTKVGYQLT  304 (361)
T ss_dssp             ECTTTCCEEEEEEEEC
T ss_pred             EcCCCCcEEEeeEecC
Confidence            98 4667766665543

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.81  E-value=5.1e-18  Score=161.77  Aligned_cols=240  Identities=10%  Similarity=0.050  Sum_probs=166.3

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeC---CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSS---DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~---D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      +..+|...|..++|+|| +++++++.   +...+||.++..        ..+... .+..+. .+...+|+++.++..++
T Consensus        59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~--------~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~  127 (582)
T 3o4h_A           59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS--------RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFT  127 (582)
T ss_dssp             CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT--------STTCCE-ECTTSC-SBEEEEEEECSSCEEEE
T ss_pred             eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc--------CCCccc-cccCCC-CceeeeeCCCCCeEEEE
Confidence            33333469999999999 78887775   566788776420        011111 232222 22345665443334566


Q ss_pred             EEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeeccccc
Q psy2762          85 SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTI  160 (318)
Q Consensus        85 s~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~  160 (318)
                      +++.|+.+ +||+.+++...+..   +..  .+++|+||  +..+++++.+    ..|.+||...+.    .+.+..|..
T Consensus       128 s~~~~~~~-l~d~~~g~~~~l~~---~~~--~~~~~spD--G~~la~~~~~~~~~~~i~~~d~~~g~----~~~l~~~~~  195 (582)
T 3o4h_A          128 GATEDRVA-LYALDGGGLRELAR---LPG--FGFVSDIR--GDLIAGLGFFGGGRVSLFTSNLSSGG----LRVFDSGEG  195 (582)
T ss_dssp             EECSSCEE-EEEEETTEEEEEEE---ESS--CEEEEEEE--TTEEEEEEEEETTEEEEEEEETTTCC----CEEECCSSC
T ss_pred             ecCCCCce-EEEccCCcEEEeec---CCC--ceEEECCC--CCEEEEEEEcCCCCeEEEEEcCCCCC----ceEeecCCC
Confidence            66665555 99998876444332   222  78999999  7788877776    678888864332    345667777


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEEEEEccCCeEEEEEEcccCCCCeeEEE--------Ecc
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIKIWKQEGDKWIEETKLENHSDWVRDVA--------WAP  230 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~iwd~~~~~~~~~~~~~~h~~~V~~v~--------~sp  230 (318)
                      .+..++|+|+                 ++.|+++..++  .|++||+.+++..   .+.+|...+..+.        |+|
T Consensus       196 ~~~~~~~SpD-----------------G~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~sp  255 (582)
T 3o4h_A          196 SFSSASISPG-----------------MKVTAGLETAREARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLP  255 (582)
T ss_dssp             EEEEEEECTT-----------------SCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred             ccccceECCC-----------------CCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcC
Confidence            8899999998                 57888888888  8999999887653   5677877777777        999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCe-EEEEEECCCCc
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNS-VSLWKENTDGA  302 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~-v~iW~~~~~~~  302 (318)
                      +    |.++++++.|++++||++ + .     ........|.+++|+ ||+.+++++.+.+ -++|..+..++
T Consensus       256 d----g~~~~~~~~~g~~~l~~~-g-~-----~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~~  316 (582)
T 3o4h_A          256 D----GRLAVVARREGRSAVFID-G-E-----RVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGEP  316 (582)
T ss_dssp             T----SCEEEEEEETTEEEEEET-T-E-----EECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE
T ss_pred             C----CcEEEEEEcCCcEEEEEE-C-C-----eeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCCc
Confidence            7    688999999999999998 2 1     111345678999999 9999998887654 55666665543

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.80  E-value=2.2e-17  Score=145.38  Aligned_cols=227  Identities=9%  Similarity=0.070  Sum_probs=150.4

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-ccc-CeEEEEecCCCCCcE-EEEEECCCeEEEEeCCCCcE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSG-PVWQVAWAHPQFGTL-LASCSYDRKVIIWRGDNGNW  102 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~-~V~~v~~~~~~~~~~-las~s~Dg~v~vWd~~~~~~  102 (318)
                      ++|++++.|++|.+||+.           +++.+..+.. +.. .+..++|++  ++++ +++++.++.|.+||+.+++.
T Consensus         2 ~~~v~~~~~~~v~~~d~~-----------~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~   68 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTE-----------KMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGET   68 (337)
T ss_dssp             EEEEEEETTTEEEEEETT-----------TTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCE
T ss_pred             cEEEEcCCCCeEEEEECC-----------CCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCe
Confidence            478999999999999986           3456666653 222 478899974  4655 46666789999999988775


Q ss_pred             EEEEEecC---CCcCeEEEEeeCCCCCcEEEEee------------cCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762         103 FKYYEYNN---HDSSVNSIAWAPKEFGLILACGS------------SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus       103 ~~~~~~~~---h~~~v~~v~~~p~~~~~~lasgs------------~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      ........   |...+.+++|+|+  +.++++++            .++.|.+||.....   ....+. ....+..++|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~-~~~~~~~~~~  142 (337)
T 1pby_B           69 LGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFE-APRQITMLAW  142 (337)
T ss_dssp             EEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEE-CCSSCCCEEE
T ss_pred             EeeEEcCCcccccccccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEe-CCCCcceeEE
Confidence            44443322   1225778999998  55566664            57899999874321   112222 2345677889


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe-CCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS-QDR  246 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s-~D~  246 (318)
                      +|+                 +++|+++  ++.|++||+.+++.........+..   .+.|+|+    +..|+..+ .++
T Consensus       143 s~d-----------------g~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~d----g~~l~~~~~~~~  196 (337)
T 1pby_B          143 ARD-----------------GSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQPD----VLAVWNQHESSG  196 (337)
T ss_dssp             CTT-----------------SSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCCB----CCCCCCCCTTTT
T ss_pred             CCC-----------------CCEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCCC----ccEEeeeccCCC
Confidence            997                 3556666  5789999998886543322221112   3378886    44343333 233


Q ss_pred             -----------------------eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         247 -----------------------KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       247 -----------------------~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                                             .|.+||+.+.... ......+...+..++|+|||++|+++  ++.|++||...+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~  270 (337)
T 1pby_B          197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN  270 (337)
T ss_dssp             EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred             ceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence                                   4689998875432 22234455678899999999999888  799999997664

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.79  E-value=5.6e-16  Score=134.07  Aligned_cols=243  Identities=11%  Similarity=0.155  Sum_probs=167.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec------ccccCeEEEEecCCCCCcEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK------GHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~------~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .||-..+.+++++++|+++++.+.++.|.+||.+            +..+..+.      +|...+.++++..+ ++.++
T Consensus        26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~------------g~~~~~~~~~~~~~~~~~~p~~i~~~~~-~g~l~   92 (286)
T 1q7f_A           26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE------------GRFKFQFGECGKRDSQLLYPNRVAVVRN-SGDII   92 (286)
T ss_dssp             TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT------------SCEEEEECCBSSSTTCBSSEEEEEEETT-TTEEE
T ss_pred             CCccCCCceEEECCCCCEEEEECCCCEEEEECCC------------CcEEEEecccCCCcccccCceEEEEEcC-CCeEE
Confidence            3566788999999999999998889999999975            23344442      35567889998432 46666


Q ss_pred             EEEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccc
Q psy2762          84 ASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTI  160 (318)
Q Consensus        84 as~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~  160 (318)
                      ++... ++.|.+||.. ++....+. ..+...+.++++.|+  +.++++...++.|.+|+.. ..   ....+.  .+..
T Consensus        93 v~~~~~~~~i~~~d~~-g~~~~~~~-~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~---~~~~~~~~~~~~  164 (286)
T 1q7f_A           93 VTERSPTHQIQIYNQY-GQFVRKFG-ATILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQN-GN---VLHKFGCSKHLE  164 (286)
T ss_dssp             EEECGGGCEEEEECTT-SCEEEEEC-TTTCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-SC---EEEEEECTTTCS
T ss_pred             EEcCCCCCEEEEECCC-CcEEEEec-CccCCCceEEEEeCC--CCEEEEECCCCEEEEEcCC-CC---EEEEeCCCCccC
Confidence            66543 8999999944 44333221 123456899999998  5677777778889998742 11   122221  2334


Q ss_pred             ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         161 GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       161 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .+..++++|+                 +..+++.+.++.|++||..... .......++...+..|+++|+    +.+++
T Consensus       165 ~p~~i~~~~~-----------------g~l~v~~~~~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~----G~l~v  222 (286)
T 1q7f_A          165 FPNGVVVNDK-----------------QEIFISDNRAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSN----GEILI  222 (286)
T ss_dssp             SEEEEEECSS-----------------SEEEEEEGGGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTT----CCEEE
T ss_pred             CcEEEEECCC-----------------CCEEEEECCCCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCC----CCEEE
Confidence            4677888885                 4567777888999999986542 222222334467899999996    77888


Q ss_pred             EEeCCC-eEEEEEcCCCcceeeEEeeecC--CcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         241 SCSQDR-KVIIWTSNDYVTWTPFIMNTFD--DVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       241 s~s~D~-~i~vw~~~~~~~~~~~~~~~~~--~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +...++ .|++|+.....   ...+..+.  ..+.+++++|+|+++++ +.|++|++|+...
T Consensus       223 ~~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          223 ADNHNNFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             EECSSSCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred             EeCCCCEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence            887776 99999965432   22222222  34789999999987776 6799999998654

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.79  E-value=1.3e-18  Score=169.84  Aligned_cols=236  Identities=14%  Similarity=0.109  Sum_probs=157.5

Q ss_pred             eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc---CeEEEEecCCCCCcEEEEEEC-----
Q psy2762          17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG---PVWQVAWAHPQFGTLLASCSY-----   88 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~v~~~~~~~~~~las~s~-----   88 (318)
                      ..++|+|+|++++++ .|++|++||+..           ++....+.+|..   .|.+++|++  ||++||+++.     
T Consensus        19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~   84 (719)
T 1z68_A           19 FFPNWISGQEYLHQS-ADNNIVLYNIET-----------GQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLW   84 (719)
T ss_dssp             CCCEESSSSEEEEEC-TTSCEEEEESSS-----------CCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECS
T ss_pred             CccEECCCCeEEEEc-CCCCEEEEEcCC-----------CcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeE
Confidence            368999999766654 699999999873           344555555554   489999974  5999999877     


Q ss_pred             ----CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccc--
Q psy2762          89 ----DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTI--  160 (318)
Q Consensus        89 ----Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~--  160 (318)
                          |++|.+||+.+++......+   ...+..++|+||  +..||.+. ++.|++|+...+..    ..+.  ++..  
T Consensus        85 ~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPD--G~~la~~~-~~~i~~~~~~~g~~----~~l~~~~~~~~v  154 (719)
T 1z68_A           85 RYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPV--GSKLAYVY-QNNIYLKQRPGDPP----FQITFNGRENKI  154 (719)
T ss_dssp             SSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSS--TTCEEEEE-TTEEEEESSTTSCC----EECCCCCBTTTE
T ss_pred             EeecceEEEEEECCCCccccceec---CcccccceECCC--CCEEEEEE-CCeEEEEeCCCCCc----EEEecCCCcCCe
Confidence                79999999988753110122   356889999999  66777765 78999998743321    1221  2221  


Q ss_pred             ---------------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC---------------------------
Q psy2762         161 ---------------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN---------------------------  198 (318)
Q Consensus       161 ---------------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~---------------------------  198 (318)
                                     ....++|+|+                 +++||+++.|.                           
T Consensus       155 ~~g~~~~v~~ee~~~~~~~~~wSPD-----------------G~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~  217 (719)
T 1z68_A          155 FNGIPDWVYEEEMLATKYALWWSPN-----------------GKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA  217 (719)
T ss_dssp             EESSCCHHHHHHTTCSSCCEEECTT-----------------SSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred             EcccccceeeeecccCcccEEECCC-----------------CCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence                           1147899998                 46777776552                           


Q ss_pred             -------eEEEEEccCCeEE---EE---EEcccCCCCeeEEEEccCCCCCccEEEEEeCC----CeEEEEE----cCCCc
Q psy2762         199 -------LIKIWKQEGDKWI---EE---TKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWT----SNDYV  257 (318)
Q Consensus       199 -------~i~iwd~~~~~~~---~~---~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----~~i~vw~----~~~~~  257 (318)
                             .|++||+.+++..   +.   ..+.+|...+..++|||+    +.++++....    ..|.+|+    ..+..
T Consensus       218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD----~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~  293 (719)
T 1z68_A          218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD----ERVCLQWLKRVQNVSVLSICDFREDWQTWD  293 (719)
T ss_dssp             TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS----SEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred             CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC----CeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence                   7889998876421   11   123468888999999996    6677764432    2488888    55432


Q ss_pred             ceeeEEe----eecCCcEE-----EEEEcCCCCEEEE--EeCCCeEEEEEECC
Q psy2762         258 TWTPFIM----NTFDDVVW-----NVSWSLTGDILTV--SCGDNSVSLWKENT  299 (318)
Q Consensus       258 ~~~~~~~----~~~~~~v~-----~v~~spdg~~l~s--~~~D~~v~iW~~~~  299 (318)
                      ..  ..+    ..+...+.     .+.|+|||+.|+.  ...++..+||-.+.
T Consensus       294 ~~--~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~  344 (719)
T 1z68_A          294 CP--KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD  344 (719)
T ss_dssp             CC--GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred             eE--EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence            11  112    34566666     8899999996654  44666555555443

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.78  E-value=7.5e-18  Score=165.30  Aligned_cols=259  Identities=13%  Similarity=0.092  Sum_probs=158.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe-----EEEEecCCCCCcEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV-----WQVAWAHPQFGTLLAS   85 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-----~~v~~~~~~~~~~las   85 (318)
                      ++......+.|+|+|++|+++  |++|++||+..           ++....+.+|...+     ..++|++  ||++|++
T Consensus        14 ~~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~   78 (740)
T 4a5s_A           14 TYRLKLYSLRWISDHEYLYKQ--ENNILVFNAEY-----------GNSSVFLENSTFDEFGHSINDYSISP--DGQFILL   78 (740)
T ss_dssp             CSCCCCCCEEECSSSEEEEEE--TTEEEEEETTT-----------CCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEE
T ss_pred             cccccccccEECCCCcEEEEc--CCcEEEEECCC-----------CceEEEEechhhhhhcccccceEECC--CCCEEEE
Confidence            344567789999999999986  99999999863           34455577776432     3467774  5999999


Q ss_pred             EECC---------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec
Q psy2762          86 CSYD---------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        86 ~s~D---------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                      ++.+         +.+.+||+.+++.   ..+..|...+..++|+||  +..||.+ .|+.|.+|+...+.    ...+.
T Consensus        79 ~~~~~~~~r~~~~~~~~~~d~~~~~~---~~l~~~~~~~~~~~~SPd--G~~la~~-~~~~i~~~~~~~~~----~~~lt  148 (740)
T 4a5s_A           79 EYNYVKQWRHSYTASYDIYDLNKRQL---ITEERIPNNTQWVTWSPV--GHKLAYV-WNNDIYVKIEPNLP----SYRIT  148 (740)
T ss_dssp             EEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCTTEEEEEECSS--TTCEEEE-ETTEEEEESSTTSC----CEECC
T ss_pred             EECCeeeEEEccceEEEEEECCCCcE---EEcccCCCcceeeEECCC--CCEEEEE-ECCeEEEEECCCCc----eEEEc
Confidence            9887         4556999998753   235567788999999999  6667776 47889999764332    12221


Q ss_pred             --cccc-----------------ccceeeeCCCCCCCccccccCCCCC--------------Cccc---eEEEecCC--C
Q psy2762         157 --AHTI-----------------GCNAVSWGPGIGSLSELDLKGSKLG--------------GVAK---RLVSGGCD--N  198 (318)
Q Consensus       157 --~h~~-----------------~v~~~~~~p~~~~~~~~~~~~~~~~--------------~~~~---~lasgs~d--~  198 (318)
                        ++..                 ....+.|||+...+.....+.....              ....   +-..|..+  .
T Consensus       149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~  228 (740)
T 4a5s_A          149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTV  228 (740)
T ss_dssp             SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEE
T ss_pred             CCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCee
Confidence              2211                 1234889998432211100000000              0000   00011111  1


Q ss_pred             eEEEEEccC---C---eEEEEEE---cccCCCCeeEEEEccCCCCCccEEEEEe----CCCeEEEEEcCCCc----ceee
Q psy2762         199 LIKIWKQEG---D---KWIEETK---LENHSDWVRDVAWAPSWGLSKCMIASCS----QDRKVIIWTSNDYV----TWTP  261 (318)
Q Consensus       199 ~i~iwd~~~---~---~~~~~~~---~~~h~~~V~~v~~sp~~~~~~~~l~s~s----~D~~i~vw~~~~~~----~~~~  261 (318)
                      .|+|||+.+   +   +......   +.+|...+..++|+|+    |+.++...    .+..|++||+.+..    +...
T Consensus       229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd----g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~  304 (740)
T 4a5s_A          229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ----ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA  304 (740)
T ss_dssp             EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET----TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred             EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC----CeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence            588899987   6   3322211   1147888999999997    66555543    33479999987654    1111


Q ss_pred             E--EeeecCCcEE-----EEEEcCCCCEEE-EEe-CCC--eEEEEEEC
Q psy2762         262 F--IMNTFDDVVW-----NVSWSLTGDILT-VSC-GDN--SVSLWKEN  298 (318)
Q Consensus       262 ~--~~~~~~~~v~-----~v~~spdg~~l~-s~~-~D~--~v~iW~~~  298 (318)
                      .  ....+..+|.     +++|+|||+.|+ ..+ .+|  .|.+|+.+
T Consensus       305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~  352 (740)
T 4a5s_A          305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID  352 (740)
T ss_dssp             GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred             EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence            1  1134555554     789999999887 665 444  56666643

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.77  E-value=8.2e-17  Score=145.07  Aligned_cols=252  Identities=11%  Similarity=0.003  Sum_probs=158.2

Q ss_pred             cCCCcceeee-----eeecCCCCEEEEeeC-CCc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC
Q psy2762           9 DTGHEDMIHD-----AEMDYLGLYLATCSS-DHT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG   80 (318)
Q Consensus         9 ~~gH~~~v~~-----~~~~~~g~~l~s~s~-D~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~   80 (318)
                      ++.|...+..     ++|+|||++|+.++. ++.  |.+||+.           .++......+|...+..+.|++  ++
T Consensus        26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~-----------~g~~~~lt~~~~~~~~~~~~sp--dg   92 (388)
T 3pe7_A           26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN-----------TQVATQLTEGRGDNTFGGFLSP--DD   92 (388)
T ss_dssp             CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT-----------TCEEEECCCSSCBCSSSCEECT--TS
T ss_pred             ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC-----------CCceEEeeeCCCCCccceEEcC--CC
Confidence            3456666665     899999999999887 775  6666765           3455555556666666778974  59


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEE--eeCCCCCcEEEEe----------------------ecCC
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIA--WAPKEFGLILACG----------------------SSDG  136 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~--~~p~~~~~~lasg----------------------s~d~  136 (318)
                      +.|+.++.++.|.+||+.+++...+..  .+...+....  ++|+  +.+++..                      ..+.
T Consensus        93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (388)
T 3pe7_A           93 DALFYVKDGRNLMRVDLATLEENVVYQ--VPAEWVGYGTWVANSD--CTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC  168 (388)
T ss_dssp             SEEEEEETTTEEEEEETTTCCEEEEEE--CCTTEEEEEEEEECTT--SSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred             CEEEEEeCCCeEEEEECCCCcceeeee--chhhcccccceeECCC--CCeeccccccCcccccccccchhhhhhccCCcc
Confidence            999999999999999999887555444  3444444343  4777  5556532                      2335


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCe
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDK  209 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~  209 (318)
                      .|.+||...+    +...+..+...+..+.|+| +                 +..|+..+.+      ..|.++|..+++
T Consensus       169 ~l~~~d~~~g----~~~~l~~~~~~~~~~~~sp~d-----------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~  227 (388)
T 3pe7_A          169 RLMRVDLKTG----ESTVILQENQWLGHPIYRPYD-----------------DSTVAFCHEGPHDLVDARMWLINEDGTN  227 (388)
T ss_dssp             EEEEEETTTC----CEEEEEEESSCEEEEEEETTE-----------------EEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred             eEEEEECCCC----ceEEeecCCccccccEECCCC-----------------CCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence            6777776433    2344555666678889999 6                 4566665543      367777776654


Q ss_pred             EEEEEEcccCC--CCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCc---EEEEEEcCC
Q psy2762         210 WIEETKLENHS--DWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDV---VWNVSWSLT  279 (318)
Q Consensus       210 ~~~~~~~~~h~--~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~---v~~v~~spd  279 (318)
                      .   ..+..+.  ..+..+.|+|+    |+.|+..+.+     ..|.+||+.+...........+...   ...+.|+||
T Consensus       228 ~---~~l~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spd  300 (388)
T 3pe7_A          228 M---RKVKTHAEGESCTHEFWVPD----GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD  300 (388)
T ss_dssp             C---EESCCCCTTEEEEEEEECTT----SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEE
T ss_pred             e---EEeeeCCCCcccccceECCC----CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccC
Confidence            3   2233343  35788999996    6666554432     2499999887542211111111000   112379999


Q ss_pred             CCEEEEE---------eCCCeEEEEEECCCCceEEE
Q psy2762         280 GDILTVS---------CGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       280 g~~l~s~---------~~D~~v~iW~~~~~~~~~~~  306 (318)
                      |+.|+..         ..+..|.+|+... ++...+
T Consensus       301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l  335 (388)
T 3pe7_A          301 GSDAPVDVQDDSGYKIENDPFLYVFNMKN-GTQHRV  335 (388)
T ss_dssp             ECCC------------CCCCEEEEEETTT-TEEEEE
T ss_pred             CCcceeEeeeccccccCCCCEEEEEeccC-CceEEe
Confidence            9998854         4566899999765 344433

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.76  E-value=2.4e-15  Score=135.12  Aligned_cols=240  Identities=11%  Similarity=0.074  Sum_probs=152.2

Q ss_pred             EEEeeCC--CcEEEEEcCCCcCCCCCCCCcceE--EEEec-ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC-CCc
Q psy2762          28 LATCSSD--HTVKVFNLDRNLKKDDSHSQKGTL--IAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD-NGN  101 (318)
Q Consensus        28 l~s~s~D--~~v~vwd~~~~~~~~~~~~~~~~~--~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~-~~~  101 (318)
                      |+.|+..  +.|.+|+++..         ++.+  +.... ++...+..++|++  ++++|++++.+ .|.+|++. +++
T Consensus         5 ~~vg~~~~~~~i~~~~~d~~---------~g~l~~~~~~~~~~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~   72 (365)
T 1jof_A            5 LMIGTWTPPGAIFTVQFDDE---------KLTCKLIKRTEIPQDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTE   72 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETT---------TTEEEEEEEEECCTTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTE
T ss_pred             EEEEEccCCCcEEEEEEECC---------CCCEEEeeEEccCCCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCC
Confidence            4445543  56888877421         2332  22221 2344678899974  58999999988 99999986 665


Q ss_pred             EEEEEEecCCCcCeEEEEeeCCCCCc--EEEEee-------------cCCeEEEEEeecCCCCcceeeec----cccccc
Q psy2762         102 WFKYYEYNNHDSSVNSIAWAPKEFGL--ILACGS-------------SDGTISFLTYMSDTNSWESRKIA----AHTIGC  162 (318)
Q Consensus       102 ~~~~~~~~~h~~~v~~v~~~p~~~~~--~lasgs-------------~d~~i~i~~~~~~~~~~~~~~~~----~h~~~v  162 (318)
                      .........+ +.+.+++|+|+  +.  ++++++             .++.+.+|++.....  ....+.    .+...+
T Consensus        73 ~~~~~~~~~~-g~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~--~~~~~~~~~~~~~~~~  147 (365)
T 1jof_A           73 IVHEASHPIG-GHPRANDADTN--TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK--LEKNVQNYEYQENTGI  147 (365)
T ss_dssp             EEEEEEEECC-SSGGGGCTTSC--CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC--EEEEEEEEECCTTCCE
T ss_pred             EEEeeEeecC-CCCccEEECCC--CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc--CcceEeeEEeCCCCcc
Confidence            4333332222 23566899998  55  344543             689999999853221  111121    134567


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEec-CCCeEEEEEcc-CCeEEEEEEcc--cCCCCeeEEEEccCCCCCccE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-CDNLIKIWKQE-GDKWIEETKLE--NHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-~d~~i~iwd~~-~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      ..++|+|+                 +++|+++. .++.|++|++. +++......+.  .|...++.+.|+|+    |++
T Consensus       148 ~~~~~spd-----------------G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd----g~~  206 (365)
T 1jof_A          148 HGMVFDPT-----------------ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT----GNY  206 (365)
T ss_dssp             EEEEECTT-----------------SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT----SSE
T ss_pred             eEEEECCC-----------------CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC----CCE
Confidence            78999997                 45566554 46799999997 66543333333  34566899999996    777


Q ss_pred             EEEEeC-CCeEEEEEcCCCc-cee--eEEeeec-------CC------cEEEEE-EcCCCCEEEEEeCCC------eEEE
Q psy2762         239 IASCSQ-DRKVIIWTSNDYV-TWT--PFIMNTF-------DD------VVWNVS-WSLTGDILTVSCGDN------SVSL  294 (318)
Q Consensus       239 l~s~s~-D~~i~vw~~~~~~-~~~--~~~~~~~-------~~------~v~~v~-~spdg~~l~s~~~D~------~v~i  294 (318)
                      |++++. +++|.+|+..... ...  ...+...       ..      .+..++ |+|||++|+++..+.      +|++
T Consensus       207 l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v  286 (365)
T 1jof_A          207 LYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG  286 (365)
T ss_dssp             EEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred             EEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence            777765 7899999865311 111  1111111       11      588999 999999988776432      8999


Q ss_pred             EEECCCCceEE
Q psy2762         295 WKENTDGAWQC  305 (318)
Q Consensus       295 W~~~~~~~~~~  305 (318)
                      |+++..|+...
T Consensus       287 ~~~~~~g~~~~  297 (365)
T 1jof_A          287 FKLRDCGSIEK  297 (365)
T ss_dssp             EEECTTSCEEE
T ss_pred             EEECCCCCEEE
Confidence            99976666554

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.76  E-value=1e-15  Score=135.72  Aligned_cols=251  Identities=10%  Similarity=0.068  Sum_probs=169.9

Q ss_pred             cceeeeeeecCCCCEEEEeeCC------------------------CcEEEEEcCCCcCCCCCCCCcceEEEEec-cccc
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSD------------------------HTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSG   67 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D------------------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~   67 (318)
                      -+.|.+++++|+|+++++.+.+                        ++|.+||..           +++++..+. ++-.
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-----------~g~~~~~~~~~~~~   91 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-----------NAEILQSSGKNLFY   91 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-----------TCCEEEEECTTTCS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-----------CCeEEeccCCCccC
Confidence            3578999999999999988877                        478999875           244554443 4556


Q ss_pred             CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEEEe-------cCCCcCeEEEEeeCCCCCcEEEEee-cCCeE
Q psy2762          68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEY-------NNHDSSVNSIAWAPKEFGLILACGS-SDGTI  138 (318)
Q Consensus        68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~~~-------~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i  138 (318)
                      ....+++++  +|+++++...++.|++||..... ......-       .++-.....|+++|++ +.++++.+ .++.|
T Consensus        92 ~p~gia~d~--~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~-g~lyv~d~~~~~~I  168 (329)
T 3fvz_A           92 LPHGLSIDT--DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST-GAVFVSDGYCNSRI  168 (329)
T ss_dssp             SEEEEEECT--TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT-CCEEEEECSSCCEE
T ss_pred             CceEEEECC--CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC-CeEEEEeCCCCCeE
Confidence            788999963  58888888889999999976542 1222111       2334468899999932 66777776 68899


Q ss_pred             EEEEeecCCCCcceeeecc----------cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC
Q psy2762         139 SFLTYMSDTNSWESRKIAA----------HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD  208 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~  208 (318)
                      ++|+. .+.   ....+..          +......++++|+.                +..+++...++.|++|+.+++
T Consensus       169 ~~~~~-~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~----------------g~l~v~d~~~~~I~~~~~~~G  228 (329)
T 3fvz_A          169 VQFSP-SGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHL----------------DQLCVADRENGRIQCFKTDTK  228 (329)
T ss_dssp             EEECT-TSC---EEEEECEECCSSSCCTTEESCEEEEEEETTT----------------TEEEEEETTTTEEEEEETTTC
T ss_pred             EEEcC-CCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCC----------------CEEEEEECCCCEEEEEECCCC
Confidence            98873 221   1122211          11224567777752                357788888999999999867


Q ss_pred             eEEEEEEcccCCCCeeEEEEccCCC--CCccEEEEEeCCCeEEEEEcCCCcceeeEEe---eecCCcEEEEEEcCCCCEE
Q psy2762         209 KWIEETKLENHSDWVRDVAWAPSWG--LSKCMIASCSQDRKVIIWTSNDYVTWTPFIM---NTFDDVVWNVSWSLTGDIL  283 (318)
Q Consensus       209 ~~~~~~~~~~h~~~V~~v~~sp~~~--~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~---~~~~~~v~~v~~spdg~~l  283 (318)
                      ++........+...+..++|+|..-  .++...++.+.+.+|++|+..+...  ...+   ..+...+..++++|||+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~ly  306 (329)
T 3fvz_A          229 EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTVY  306 (329)
T ss_dssp             CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred             cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCEE
Confidence            6655544456777899999999100  0122233333455899999776532  2222   2344568999999999888


Q ss_pred             EEEeCCCeEEEEEECC
Q psy2762         284 TVSCGDNSVSLWKENT  299 (318)
Q Consensus       284 ~s~~~D~~v~iW~~~~  299 (318)
                      ++...++.|++|+.+.
T Consensus       307 vad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          307 IGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEESSSCCEEEEEEEE
T ss_pred             EEECCCCEEEEEeCCc
Confidence            8888899999998654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.76  E-value=9.8e-17  Score=144.55  Aligned_cols=249  Identities=11%  Similarity=0.024  Sum_probs=159.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE-
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC-   86 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~-   86 (318)
                      +..+|...+..+.|+|||++|+.++.++.|.+||+..           ++....+..+.+.+....|....++.+++.. 
T Consensus        75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-----------g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~  143 (388)
T 3pe7_A           75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-----------LEENVVYQVPAEWVGYGTWVANSDCTKLVGIE  143 (388)
T ss_dssp             CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-----------CCEEEEEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred             eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-----------CcceeeeechhhcccccceeECCCCCeecccc
Confidence            4556776777889999999999999999999999973           3333344555555554444212357877742 


Q ss_pred             ---------------------ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC-CCCCcEEEEeecCC------eE
Q psy2762          87 ---------------------SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP-KEFGLILACGSSDG------TI  138 (318)
Q Consensus        87 ---------------------s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~lasgs~d~------~i  138 (318)
                                           +.+..|.+||+.+++...+   ..+...+..++|+| +  +..++....+.      .|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l  218 (388)
T 3pe7_A          144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---LQENQWLGHPIYRPYD--DSTVAFCHEGPHDLVDARM  218 (388)
T ss_dssp             EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE---EEESSCEEEEEEETTE--EEEEEEEECSCTTTSSCSE
T ss_pred             ccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe---ecCCccccccEECCCC--CCEEEEEEecCCCCCcceE
Confidence                                 3457899999988764333   23556789999999 8  56666665432      45


Q ss_pred             EEEEeecCCCCcceeeecccc--cccceeeeCCCCCCCccccccCCCCCCccceEEEecC--C---CeEEEEEccCCeEE
Q psy2762         139 SFLTYMSDTNSWESRKIAAHT--IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--D---NLIKIWKQEGDKWI  211 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d---~~i~iwd~~~~~~~  211 (318)
                      .+++..  ..  ....+..+.  ..+....|+|+                 ++.|+..+.  +   ..|++||+.+++..
T Consensus       219 ~~~d~~--~~--~~~~l~~~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~  277 (388)
T 3pe7_A          219 WLINED--GT--NMRKVKTHAEGESCTHEFWVPD-----------------GSALVYVSYLKGSPDRFIYSADPETLENR  277 (388)
T ss_dssp             EEEETT--SC--CCEESCCCCTTEEEEEEEECTT-----------------SSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred             EEEeCC--CC--ceEEeeeCCCCcccccceECCC-----------------CCEEEEEecCCCCCcceEEEEecCCCceE
Confidence            555532  21  223343333  24667889997                 344544332  1   24999999888654


Q ss_pred             EEEEcccCCCC---eeEEEEccCCCCCccEEEEE---------eCCCeEEEEEcCCCcceeeEEeeecCC----------
Q psy2762         212 EETKLENHSDW---VRDVAWAPSWGLSKCMIASC---------SQDRKVIIWTSNDYVTWTPFIMNTFDD----------  269 (318)
Q Consensus       212 ~~~~~~~h~~~---V~~v~~sp~~~~~~~~l~s~---------s~D~~i~vw~~~~~~~~~~~~~~~~~~----------  269 (318)
                      ....+.++...   ...+.|+|+    |+.|+..         ..+..|.+|++.+..   ...+..+..          
T Consensus       278 ~l~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~~~~  350 (388)
T 3pe7_A          278 QLTSMPACSHLMSNYDGSLMVGD----GSDAPVDVQDDSGYKIENDPFLYVFNMKNGT---QHRVARHDTSWKVFEGDRQ  350 (388)
T ss_dssp             EEEEECCEEEEEECTTSSEEEEE----ECCC------------CCCCEEEEEETTTTE---EEEEEECCCCCCCBTTBSS
T ss_pred             EEEcCCCceeeeecCCCCeEccC----CCcceeEeeeccccccCCCCEEEEEeccCCc---eEEeccccCcccccccccc
Confidence            44444442111   122479996    6666643         456789999988743   233444443          


Q ss_pred             -cEEEEEEcCCCCEEEEEe-CCCeEEEEEECCC
Q psy2762         270 -VVWNVSWSLTGDILTVSC-GDNSVSLWKENTD  300 (318)
Q Consensus       270 -~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~  300 (318)
                       .+.+++|+|||+.|+.++ .++..+||.++..
T Consensus       351 ~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~  383 (388)
T 3pe7_A          351 VTHPHPSFTPDDKQILFTSDVHGKPALYLATLP  383 (388)
T ss_dssp             TTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred             cCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence             477899999999888776 5788889987653

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.72  E-value=3.9e-16  Score=150.81  Aligned_cols=255  Identities=10%  Similarity=0.046  Sum_probs=168.8

Q ss_pred             cCCCcceeeeeeecCCCCEEEEe--eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeE---------EEEecC-
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATC--SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW---------QVAWAH-   76 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~--s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~v~~~~-   76 (318)
                      ..+|...|..++|++++.++++.  +.++..+||.+...          + ....+..|...|.         ...|+. 
T Consensus        19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~----------~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~S   87 (662)
T 3azo_A           19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD----------G-AEESALPAPWNVRNRVFEYSGFPWAGVPR   87 (662)
T ss_dssp             HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT----------S-CEEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred             HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC----------C-CcceeCCCCccccccccccCCccceeeee
Confidence            34789999999999988888887  66899999986311          2 2455666766665         566652 


Q ss_pred             CCCCcE-EEEEEC-CCeEEEEeCC--C-CcEEEEEEecC-----CCcCeEEEEeeCCCCCcEEEEeecC----------C
Q psy2762          77 PQFGTL-LASCSY-DRKVIIWRGD--N-GNWFKYYEYNN-----HDSSVNSIAWAPKEFGLILACGSSD----------G  136 (318)
Q Consensus        77 ~~~~~~-las~s~-Dg~v~vWd~~--~-~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~lasgs~d----------~  136 (318)
                      | ||++ |+.++. +..|.+|++.  . +...   .+..     |...+.+++|+|+  +..|++++.+          .
T Consensus        88 P-Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~  161 (662)
T 3azo_A           88 P-AGGPLLVFTHFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRR  161 (662)
T ss_dssp             S-SSSCEEEEEBTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEE
T ss_pred             c-CCCeEEEEEECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEECCC--CCEEEEEEecccCCCCCCcee
Confidence            4 5777 666554 4566666665  2 3322   2333     5677899999999  6677777766          4


Q ss_pred             eEEEEEeecCC--CCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC--------CeEEEEEc
Q psy2762         137 TISFLTYMSDT--NSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD--------NLIKIWKQ  205 (318)
Q Consensus       137 ~i~i~~~~~~~--~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d--------~~i~iwd~  205 (318)
                      .|.+|+.....  .......+. .+...+..++|+|+                 +++||..+.+        ..|++||+
T Consensus       162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpD-----------------G~~la~~~~~~~~~~~~~~~i~~~d~  224 (662)
T 3azo_A          162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPD-----------------GRQAVWLAWDHPRMPWEGTELKTARV  224 (662)
T ss_dssp             EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTT-----------------SSEEEEEEECTTCCTTTCEEEEEEEE
T ss_pred             EEEEEECCCCccccCCceeEEEecCCCcccCceECCC-----------------CCEEEEEECCCCCCCCCCcEEEEEEE
Confidence            78888864310  001234454 55566778899997                 5678877755        37999999


Q ss_pred             c-CCeEEEE-EEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--eEEEEEcCCCcceeeEEeeecC-Cc--------EE
Q psy2762         206 E-GDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--KVIIWTSNDYVTWTPFIMNTFD-DV--------VW  272 (318)
Q Consensus       206 ~-~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--~i~vw~~~~~~~~~~~~~~~~~-~~--------v~  272 (318)
                      . +++.... ....+|...+..+.|+|+    |++++++..|+  .|.+|++.+..   ...+..+. ..        +.
T Consensus       225 ~~~g~~~~~~~l~~~~~~~~~~~~~spd----g~l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~  297 (662)
T 3azo_A          225 TEDGRFADTRTLLGGPEEAIAQAEWAPD----GSLIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMR  297 (662)
T ss_dssp             CTTSCEEEEEEEEEETTBCEEEEEECTT----SCEEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCC
T ss_pred             CCCCcccccEEeCCCCCceEcceEECCC----CeEEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCc
Confidence            8 4521111 222356778999999996    66888888888  45555553332   12222111 11        56


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEECCC-CceEE
Q psy2762         273 NVSWSLTGDILTVSCGDNSVSLWKENTD-GAWQC  305 (318)
Q Consensus       273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~-~~~~~  305 (318)
                      +++|+|++++++++.. ++++||.++.. ++.+.
T Consensus       298 ~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~  330 (662)
T 3azo_A          298 WFAPLANGLIAVVHGK-GAAVLGILDPESGELVD  330 (662)
T ss_dssp             SEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE
T ss_pred             eEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE
Confidence            7899999999999999 99999977653 44433

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.72  E-value=8.8e-17  Score=156.87  Aligned_cols=238  Identities=13%  Similarity=0.187  Sum_probs=156.0

Q ss_pred             eeeeeeecCCCCEEEEeeC---------CCcEEEEEcCCCcCCCCCCCCcceEE--EEecccccCeEEEEecCCCCCcEE
Q psy2762          15 MIHDAEMDYLGLYLATCSS---------DHTVKVFNLDRNLKKDDSHSQKGTLI--AELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~---------D~~v~vwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      .|.+++|||||++|++++.         |++|++||++.           ++.+  ..+   ...+..++|++  ||+.|
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~-----------g~~~~~~~l---~~~~~~~~~SP--DG~~l  124 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN-----------GEFVRGNEL---PRPIQYLCWSP--VGSKL  124 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-----------TEECCSSCC---CSSBCCEEECS--STTCE
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC-----------Cccccceec---CcccccceECC--CCCEE
Confidence            3889999999999999876         79999999973           2321  112   35688899974  59999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCe-----------------EEEEeeCCCCCcEEEEeecCC----------
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV-----------------NSIAWAPKEFGLILACGSSDG----------  136 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~~~lasgs~d~----------  136 (318)
                      |+++ |+.|++|++.+++...+ ...++...|                 .+++|+||  +..|++++.|.          
T Consensus       125 a~~~-~~~i~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPD--G~~la~~~~d~~~~~~~~~~~  200 (719)
T 1z68_A          125 AYVY-QNNIYLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPN--GKFLAYAEFNDTDIPVIAYSY  200 (719)
T ss_dssp             EEEE-TTEEEEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTT--SSEEEEEEEECTTSCEEEEEE
T ss_pred             EEEE-CCeEEEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCcccEEECCC--CCEEEEEEECCCCCceEEeec
Confidence            9986 88999999987754332 112332222                 48999999  67788877652          


Q ss_pred             ------------------------eEEEEEeecCCCC--cce---eeecccccccceeeeCCCCCCCccccccCCCCCCc
Q psy2762         137 ------------------------TISFLTYMSDTNS--WES---RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV  187 (318)
Q Consensus       137 ------------------------~i~i~~~~~~~~~--~~~---~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~  187 (318)
                                              .|.+||...+...  ..+   ..+.+|...+..++|+|+                 
T Consensus       201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-----------------  263 (719)
T 1z68_A          201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-----------------  263 (719)
T ss_dssp             CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-----------------
T ss_pred             cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-----------------
Confidence                                    6677776332100  000   112356677889999997                 


Q ss_pred             cceEEEec--CC--CeEEEEE----ccCCeEEEEEEc----ccCCCCee-----EEEEccCCCCCccEEE--EEeCCC--
Q psy2762         188 AKRLVSGG--CD--NLIKIWK----QEGDKWIEETKL----ENHSDWVR-----DVAWAPSWGLSKCMIA--SCSQDR--  246 (318)
Q Consensus       188 ~~~lasgs--~d--~~i~iwd----~~~~~~~~~~~~----~~h~~~V~-----~v~~sp~~~~~~~~l~--s~s~D~--  246 (318)
                      ++.+++..  .+  ..|.+||    ..++++.  ..+    .+|..++.     .+.|+|+    |..|+  +...++  
T Consensus       264 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~spd----g~~l~~~~~~~~g~~  337 (719)
T 1z68_A          264 ERVCLQWLKRVQNVSVLSICDFREDWQTWDCP--KTQEHIEESRTGWAGGFFVSTPVFSYD----AISYYKIFSDKDGYK  337 (719)
T ss_dssp             SEEEEEEEESSTTEEEEEEEEECSSSSSEECC--GGGEEEEECSSSCSSSSSCCCCEECTT----SSCEEEEEECTTSCE
T ss_pred             CeEEEEEeccccCeEEEEEEcccCCCCCCceE--EEEecccccCCceEccccCCccEECCC----CCeEEEEEEccCCce
Confidence            34555533  22  2477888    6665432  222    46777777     8999997    55443  344566  


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENT  299 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~  299 (318)
                      .|.+|++.+..   ...+..+...|..+.++ +|+.|+..+.+     +..+||.++.
T Consensus       338 ~l~~~~~~~~~---~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~  391 (719)
T 1z68_A          338 HIHYIKDTVEN---AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI  391 (719)
T ss_dssp             EEEEESSCSTT---CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred             EEEEEECCCCc---eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence            45566665433   23344444557788888 88887777654     8899999877

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.69  E-value=2.1e-14  Score=140.11  Aligned_cols=251  Identities=10%  Similarity=-0.005  Sum_probs=160.4

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      ..+|...+..++|||||++|+.++.++     +|+|||+..           ++.+.... ....+..++|++  ||+.|
T Consensus       120 ~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t-----------g~~~~~~~-~~~~~~~~~wsp--Dg~~l  185 (710)
T 2xdw_A          120 SDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG-----------AKELPDVL-ERVKFSCMAWTH--DGKGM  185 (710)
T ss_dssp             CTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT-----------TEEEEEEE-EEECSCCEEECT--TSSEE
T ss_pred             ccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCcccc-cCcccceEEEEe--CCCEE
Confidence            356666788999999999998766544     899999973           34333211 222367799974  58999


Q ss_pred             EEEECCCe----------------EEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-----CCeEEE
Q psy2762          84 ASCSYDRK----------------VIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-----DGTISF  140 (318)
Q Consensus        84 as~s~Dg~----------------v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-----d~~i~i  140 (318)
                      +.++.|+.                |.+|++.++..  ..++....|...+..++|+|+  +.+++..+.     +..|.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~  263 (710)
T 2xdw_A          186 FYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWY  263 (710)
T ss_dssp             EEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEE
T ss_pred             EEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEE
Confidence            99998876                99999987642  233333345666889999999  556665554     567888


Q ss_pred             EEeec------CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC----CCeEEEEEccCCeE
Q psy2762         141 LTYMS------DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC----DNLIKIWKQEGDKW  210 (318)
Q Consensus       141 ~~~~~------~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~----d~~i~iwd~~~~~~  210 (318)
                      |+...      +.  .....+..+...+.. .|+|+                 +..|+..+.    +..|.+||+.++..
T Consensus       264 ~d~~~~~~~~~~~--~~~~~l~~~~~~~~~-~~s~d-----------------g~~l~~~s~~~~~~~~l~~~d~~~~~~  323 (710)
T 2xdw_A          264 CDLQQESNGITGI--LKWVKLIDNFEGEYD-YVTNE-----------------GTVFTFKTNRHSPNYRLINIDFTDPEE  323 (710)
T ss_dssp             EEGGGSSSSSCSS--CCCEEEECSSSSCEE-EEEEE-----------------TTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred             EECcccccccCCc--cceEEeeCCCCcEEE-EEecc-----------------CCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence            88754      21  123344445444433 36664                 234444333    33699999876531


Q ss_pred             EEEEEcccCCC--CeeEEEEccCCCCCccEEEEEeCCCeEE--EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         211 IEETKLENHSD--WVRDVAWAPSWGLSKCMIASCSQDRKVI--IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       211 ~~~~~~~~h~~--~V~~v~~sp~~~~~~~~l~s~s~D~~i~--vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      .....+..|..  .+..+.|+++    +.++++...|+..+  +|++.+..  ....+..+...|..++++|+++.|+.+
T Consensus       324 ~~~~~l~~~~~~~~~~~~~~~~~----~~lv~~~~~~g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~  397 (710)
T 2xdw_A          324 SKWKVLVPEHEKDVLEWVACVRS----NFLVLCYLHDVKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQ  397 (710)
T ss_dssp             GGCEEEECCCSSCEEEEEEEETT----TEEEEEEEETTEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred             ccceeccCCCCCCeEEEEEEEcC----CEEEEEEEECCEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEE
Confidence            00122333433  6888999874    77889999998655  45653322  123344446678999999999876633


Q ss_pred             -e---CCCeEEEEEECCCC
Q psy2762         287 -C---GDNSVSLWKENTDG  301 (318)
Q Consensus       287 -~---~D~~v~iW~~~~~~  301 (318)
                       +   ..+++.+||+.++.
T Consensus       398 ~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          398 FTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EECSSCCCEEEEEETTSSS
T ss_pred             EeCCCCCCEEEEEECCCCc
Confidence             2   35689999876543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.68  E-value=3.8e-14  Score=123.24  Aligned_cols=239  Identities=14%  Similarity=0.083  Sum_probs=161.0

Q ss_pred             CCcceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+.....+++|+|+|+ +++++..++.|.+||.+           .+  ...+..+...+.++++++  +|+++++...+
T Consensus        25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~-----------~~--~~~~~~~~~~~~~l~~~~--dg~l~v~~~~~   89 (296)
T 3e5z_A           25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD-----------GQ--LSPEMHPSHHQNGHCLNK--QGHLIACSHGL   89 (296)
T ss_dssp             CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT-----------SC--EEEEESSCSSEEEEEECT--TCCEEEEETTT
T ss_pred             cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC-----------CC--eEEEECCCCCcceeeECC--CCcEEEEecCC
Confidence            3455778899999998 78888889999999986           22  455666778899999964  58888777777


Q ss_pred             CeEEEEeCCCCcEEEEEEe-cC-CCcCeEEEEeeCCCCCcEEEE----eecC-----------CeEEEEEeecCCCCcce
Q psy2762          90 RKVIIWRGDNGNWFKYYEY-NN-HDSSVNSIAWAPKEFGLILAC----GSSD-----------GTISFLTYMSDTNSWES  152 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~-~~-h~~~v~~v~~~p~~~~~~las----gs~d-----------~~i~i~~~~~~~~~~~~  152 (318)
                      +.|.+||..+++....... .. ....++.+++.|+  +.++++    |+.+           +.-.||.+... .  ..
T Consensus        90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~  164 (296)
T 3e5z_A           90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD--GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TL  164 (296)
T ss_dssp             TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT--SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CE
T ss_pred             CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC--CCEEEECCccccccccccccccccCCCcEEEEECCC-C--CE
Confidence            9999999877764333211 11 1234678999998  667776    3311           11245555332 1  22


Q ss_pred             eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-CCeE-EEEEEcccCCCCeeEEEEcc
Q psy2762         153 RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-GDKW-IEETKLENHSDWVRDVAWAP  230 (318)
Q Consensus       153 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-~~~~-~~~~~~~~h~~~V~~v~~sp  230 (318)
                      ..+..+....+.++|+|+                 ++.|++.+.++.|++|++. .+++ .....+..+...+..+++++
T Consensus       165 ~~~~~~~~~~~gi~~s~d-----------------g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~  227 (296)
T 3e5z_A          165 SAPIRDRVKPNGLAFLPS-----------------GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA  227 (296)
T ss_dssp             EEEECCCSSEEEEEECTT-----------------SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred             EEeecCCCCCccEEECCC-----------------CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence            333444455678899997                 3556888888999999986 4443 22222234556678899999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE-cCCCCEEEEEeCCCeEEEEEECC
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW-SLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~-spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +    |.++++.  ++.|.+|+.....   ...+..+.. +.+++| +|+++.|+.++.++   ||.++.
T Consensus       228 ~----G~l~v~~--~~~v~~~~~~g~~---~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~~  284 (296)
T 3e5z_A          228 G----GLIWASA--GDGVHVLTPDGDE---LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIET  284 (296)
T ss_dssp             T----SCEEEEE--TTEEEEECTTSCE---EEEEECSSC-CCEEEEESTTSCEEEEEETTE---EEEEEC
T ss_pred             C----CCEEEEc--CCeEEEECCCCCE---EEEEECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEEc
Confidence            6    6666655  8889999986432   233333445 889999 69999999888774   555444

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.68  E-value=2.1e-15  Score=135.88  Aligned_cols=236  Identities=8%  Similarity=0.016  Sum_probs=147.2

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEE-------------------EEecC
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ-------------------VAWAH   76 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-------------------v~~~~   76 (318)
                      ...+.|+|||++|+..+.++.|.+||+...           +.......+.+....                   +.|++
T Consensus        83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~-----------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp  151 (396)
T 3c5m_A           83 TFGGFISTDERAFFYVKNELNLMKVDLETL-----------EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP  151 (396)
T ss_dssp             TTTCEECTTSSEEEEEETTTEEEEEETTTC-----------CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred             cccceECCCCCEEEEEEcCCcEEEEECCCC-----------CcEEEEecccccCCCCCEEEeccCCccccccccccccCC
Confidence            334789999999999999999999998632           222223333332222                   23332


Q ss_pred             CCCCcEEEEE-----ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeC-CCCCcEEEEeecC------CeEEEEEee
Q psy2762          77 PQFGTLLASC-----SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAP-KEFGLILACGSSD------GTISFLTYM  144 (318)
Q Consensus        77 ~~~~~~las~-----s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~~lasgs~d------~~i~i~~~~  144 (318)
                        +++.++.+     ..+..|.+||+.+++...+.   .+...+..+.|+| +  +..++..+.+      ..|.+|+..
T Consensus       152 --dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~  224 (396)
T 3c5m_A          152 --LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNED  224 (396)
T ss_dssp             --CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETT
T ss_pred             --CCcceeeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCC--CCEEEEEecCCCCCCCceEEEEECC
Confidence              35554443     35678999999887644432   3556789999999 5  4445544443      245566542


Q ss_pred             cCCCCcceeeeccc--ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcc
Q psy2762         145 SDTNSWESRKIAAH--TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLE  217 (318)
Q Consensus       145 ~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~  217 (318)
                      ..    ....+..+  ...+..+.|+|+                 +++|+..+.+     +.|++||+.+++......+.
T Consensus       225 ~~----~~~~l~~~~~~~~~~~~~~spd-----------------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~  283 (396)
T 3c5m_A          225 GS----NVRKIKEHAEGESCTHEFWIPD-----------------GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP  283 (396)
T ss_dssp             SC----CCEESSCCCTTEEEEEEEECTT-----------------SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC
T ss_pred             CC----ceeEeeccCCCccccceEECCC-----------------CCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC
Confidence            21    12233322  224667899997                 3556655443     45999999887654444333


Q ss_pred             cCCCCeeEEEEcc-CCCCCccEEEEEe----------------CCCeEEEEEcCCCcceeeEEeeecCC-----------
Q psy2762         218 NHSDWVRDVAWAP-SWGLSKCMIASCS----------------QDRKVIIWTSNDYVTWTPFIMNTFDD-----------  269 (318)
Q Consensus       218 ~h~~~V~~v~~sp-~~~~~~~~l~s~s----------------~D~~i~vw~~~~~~~~~~~~~~~~~~-----------  269 (318)
                      +    .. +.|+| +    +.+|+.++                .+..|.+|++.+...   ..+..+..           
T Consensus       284 ~----~~-~~~s~~d----g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~~  351 (396)
T 3c5m_A          284 P----CS-HLMSNFD----GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA---QKLCKHSTSWDVLDGDRQI  351 (396)
T ss_dssp             S----EE-EEEECSS----SSEEEEEECCC----------CCCCCCEEEEEETTTTBC---CEEEECCCCCCCBTTBSST
T ss_pred             C----CC-CCccCCC----CceEEEecCCcceeeccccccccCCCCcEEEEecccCce---EEccCCCCccccccccccC
Confidence            3    23 88999 7    66777655                347899999876532   22333332           


Q ss_pred             cEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCc
Q psy2762         270 VVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGA  302 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~  302 (318)
                      .+.+++|+|||+.|+.++. ++...||.++..+.
T Consensus       352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~  385 (396)
T 3c5m_A          352 THPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES  385 (396)
T ss_dssp             TCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred             CCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence            2567899999999887764 67888998875443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.65  E-value=3.6e-15  Score=134.26  Aligned_cols=235  Identities=10%  Similarity=0.028  Sum_probs=145.9

Q ss_pred             eeeeeeecCCCCEEEEeeCC---CcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEEECCC
Q psy2762          15 MIHDAEMDYLGLYLATCSSD---HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .+..++|+|||++|+..+..   ..|.+||+..           ++. ..+..+... ...+.|++  +|++|+.++.++
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~-----------~~~-~~l~~~~~~~~~~~~~sp--dg~~l~~~~~~~  102 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET-----------QQA-VQLTEGKGDNTFGGFIST--DERAFFYVKNEL  102 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT-----------TEE-EECCCSSCBCTTTCEECT--TSSEEEEEETTT
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCC-----------CcE-EEeecCCCCccccceECC--CCCEEEEEEcCC
Confidence            37889999999998876543   3577777752           333 333333333 33377874  589999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEE-------------------EEeeCCCCCcEEEEe-----ecCCeEEEEEeecC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNS-------------------IAWAPKEFGLILACG-----SSDGTISFLTYMSD  146 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~-------------------v~~~p~~~~~~lasg-----s~d~~i~i~~~~~~  146 (318)
                      .|.+||+.+++...+...  +......                   ++|+|+.  ..++..     ..+..|.+|++..+
T Consensus       103 ~l~~~d~~~~~~~~~~~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~l~~~d~~~g  178 (396)
T 3c5m_A          103 NLMKVDLETLEEQVIYTV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT--SWEKFAEFYHTNPTCRLIKVDIETG  178 (396)
T ss_dssp             EEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC--SHHHHHHHHHTCCCEEEEEEETTTC
T ss_pred             cEEEEECCCCCcEEEEec--ccccCCCCCEEEeccCCccccccccccccCCCC--cceeeeeeccCCCcceEEEEECCCC
Confidence            999999988765444332  2222222                   3456663  333322     34556777776332


Q ss_pred             CCCcceeeecccccccceeeeCC-CCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCeEEEEEEcccC
Q psy2762         147 TNSWESRKIAAHTIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       147 ~~~~~~~~~~~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                          +...+..+...+..+.|+| +                 +..|+..+.+      ..|.+||..+++...   +..+
T Consensus       179 ----~~~~~~~~~~~~~~~~~sp~d-----------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~  234 (396)
T 3c5m_A          179 ----ELEVIHQDTAWLGHPIYRPFD-----------------DSTVGFCHEGPHDLVDARMWLVNEDGSNVRK---IKEH  234 (396)
T ss_dssp             ----CEEEEEEESSCEEEEEEETTE-----------------EEEEEEEECSCSSSCSCCCEEEETTSCCCEE---SSCC
T ss_pred             ----cEEeeccCCcccccceECCCC-----------------CCEEEEEecCCCCCCCceEEEEECCCCceeE---eecc
Confidence                2333445556677889998 4                 3445554433      358888887654322   2223


Q ss_pred             --CCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEe----
Q psy2762         220 --SDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSC----  287 (318)
Q Consensus       220 --~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~----  287 (318)
                        ...+..+.|+|+    |.+|+.++.+     +.|.+|++.+...   ..+..... .. +.|+| ||++|+.++    
T Consensus       235 ~~~~~~~~~~~spd----g~~l~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p  305 (396)
T 3c5m_A          235 AEGESCTHEFWIPD----GSAMAYVSYFKGQTDRVIYKANPETLEN---EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAP  305 (396)
T ss_dssp             CTTEEEEEEEECTT----SSCEEEEEEETTTCCEEEEEECTTTCCE---EEEEECCS-EE-EEEECSSSSEEEEEECCC-
T ss_pred             CCCccccceEECCC----CCEEEEEecCCCCccceEEEEECCCCCe---EEeeeCCC-CC-CCccCCCCceEEEecCCcc
Confidence              235788999996    7777777654     5599999876432   22222222 23 89999 999998765    


Q ss_pred             ------------CCCeEEEEEECCC
Q psy2762         288 ------------GDNSVSLWKENTD  300 (318)
Q Consensus       288 ------------~D~~v~iW~~~~~  300 (318)
                                  .+..|.+|+...+
T Consensus       306 ~~~~~~~~~~~~~~~~i~~~d~~~~  330 (396)
T 3c5m_A          306 VDVADADSYNIENDPFLYVLNTKAK  330 (396)
T ss_dssp             ---------CCCCCCEEEEEETTTT
T ss_pred             eeeccccccccCCCCcEEEEecccC
Confidence                        3478999986553

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.65  E-value=1.8e-13  Score=121.29  Aligned_cols=229  Identities=11%  Similarity=0.104  Sum_probs=148.8

Q ss_pred             eeeeeeecCCCCEEEEeeCC---Cc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          15 MIHDAEMDYLGLYLATCSSD---HT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D---~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .+..++|+|||++|+..+.+   +.  |.+|++..           ++... +..+.. +..+.|++  +|+.|+.++.+
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~-----------g~~~~-l~~~~~-~~~~~wsp--dg~~l~~~~~~  124 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET-----------LSSKK-ILEAKN-IRSLEWNE--DSRKLLIVGFK  124 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT-----------TEEEE-EEEESE-EEEEEECT--TSSEEEEEEEC
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC-----------CceEE-EEcCCC-ccceeECC--CCCEEEEEEcc
Confidence            46778999999999987754   34  56666642           33322 222334 99999974  58888887743


Q ss_pred             ---------------------------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC------
Q psy2762          90 ---------------------------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG------  136 (318)
Q Consensus        90 ---------------------------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~------  136 (318)
                                                 ..|.+||+.+++.....  .. . .+..++|+|+  + +++++..+.      
T Consensus       125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l--~~-~-~~~~~~~spd--g-~~~~~~~~~~~~~~~  197 (347)
T 2gop_A          125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF--EK-P-RFSSGIWHRD--K-IVVNVPHREIIPQYF  197 (347)
T ss_dssp             CCC---------CCCC---------CEEEEEEEETTTTEEEEEE--EE-E-TTCEEEEETT--E-EEEEEECCCSSCCSS
T ss_pred             CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee--cC-C-CcccccCCCC--e-EEEEEeccccccccc
Confidence                                       57888999877641222  22 2 6889999998  5 666665542      


Q ss_pred             -eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC--------CeEEEEEccC
Q psy2762         137 -TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD--------NLIKIWKQEG  207 (318)
Q Consensus       137 -~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d--------~~i~iwd~~~  207 (318)
                       ...+|.+.  ..  +...+..+ ..+..  ++|+                 +++|+.++.+        ..|.+||  +
T Consensus       198 ~~~~l~~~d--~~--~~~~l~~~-~~~~~--~spd-----------------g~~l~~~~~~~~~~~~~~~~l~~~d--~  251 (347)
T 2gop_A          198 KFWDIYIWE--DG--KEEKMFEK-VSFYA--VDSD-----------------GERILLYGKPEKKYMSEHNKLYIYD--G  251 (347)
T ss_dssp             CCEEEEEEE--TT--EEEEEEEE-ESEEE--EEEC-----------------SSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred             ccccEEEeC--CC--ceEEeccC-cceee--ECCC-----------------CCEEEEEEccccCCccccceEEEEC--C
Confidence             45666654  21  23344433 33333  3665                 4566666543        3677887  4


Q ss_pred             CeEEEEEEcccCCCCeeE-EEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         208 DKWIEETKLENHSDWVRD-VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       208 ~~~~~~~~~~~h~~~V~~-v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      ++..  ....+|...+.. +.|+ +    + ++++++.|+.++|| +...   ....+..+...|.+++|+|  ..++++
T Consensus       252 ~~~~--~l~~~~~~~~~~~~~~s-d----g-~~~~~~~~~~~~l~-~~~g---~~~~~~~~~~~v~~~~~s~--~~~~~~  317 (347)
T 2gop_A          252 KEVM--GILDEVDRGVGQAKIKD-G----K-VYFTLFEEGSVNLY-IWDG---EIKPIAKGRHWIMGFDVDE--IVVYLK  317 (347)
T ss_dssp             SCEE--ESSTTCCSEEEEEEEET-T----E-EEEEEEETTEEEEE-EESS---SEEEEECSSSEEEEEEESS--SEEEEE
T ss_pred             CceE--eccccCCcccCCccEEc-C----c-EEEEEecCCcEEEE-EcCC---ceEEEecCCCeEEeeeeeC--cEEEEE
Confidence            4432  223556677886 8998 6    6 89999999999999 8632   2233334567899999999  677778


Q ss_pred             eCCCeE-EEEEECCCCceEEEe
Q psy2762         287 CGDNSV-SLWKENTDGAWQCIT  307 (318)
Q Consensus       287 ~~D~~v-~iW~~~~~~~~~~~~  307 (318)
                      +.++.. +||..+  |....+.
T Consensus       318 ~~~~~~~~l~~~~--g~~~~lt  337 (347)
T 2gop_A          318 ETATRLRELFTWD--GEEKQLT  337 (347)
T ss_dssp             ECSSSCCEEEEES--SSEEECC
T ss_pred             cCCCChHHheEeC--CcEEEec
Confidence            777765 899887  5544443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.65  E-value=2.9e-14  Score=137.69  Aligned_cols=257  Identities=9%  Similarity=-0.048  Sum_probs=161.3

Q ss_pred             cCCCcceee---------eeeec--CCCCE-EEEeeCCCcEEEEEcCCCcCCCCCCCCcc-eEEEEecc-----cccCeE
Q psy2762           9 DTGHEDMIH---------DAEMD--YLGLY-LATCSSDHTVKVFNLDRNLKKDDSHSQKG-TLIAELKG-----HSGPVW   70 (318)
Q Consensus         9 ~~gH~~~v~---------~~~~~--~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~-----h~~~V~   70 (318)
                      .++|...|.         ...++  |||++ |+..+. ...+||.++..        ..+ .....+..     |...+.
T Consensus        63 l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-~~~~l~~~~~~--------~~g~~~~~~l~~~~~~~~~~~~~  133 (662)
T 3azo_A           63 ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-GDQRLYAFEPD--------APGGAVPRPLTPVSAVGGGLRWA  133 (662)
T ss_dssp             SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT-TTCCEEEECTT--------STTCCCCEECSCCCCSTTCEEEE
T ss_pred             eCCCCccccccccccCCccceeeeecCCCeEEEEEEC-CCCeEEEEcCC--------CCCCCCCEeccCCccCCCCcccc
Confidence            345666666         55555  99998 775543 34455554310        001 12344555     677889


Q ss_pred             EEEecCCCCCcEEEEEECC----------CeEEEEeCCC------CcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          71 QVAWAHPQFGTLLASCSYD----------RKVIIWRGDN------GNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~D----------g~v~vWd~~~------~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      +++|++  ||+.|++++.|          ..|.+||+.+      +...   .+. .+...+..++|+||  +..|+..+
T Consensus       134 ~~~~sp--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~SpD--G~~la~~~  206 (662)
T 3azo_A          134 DPVLLP--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTGPRLSPD--GRQAVWLA  206 (662)
T ss_dssp             EEEEET--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---ESSCSCSSEECCCEECTT--SSEEEEEE
T ss_pred             CcEECC--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---EEEecCCCcccCceECCC--CCEEEEEE
Confidence            999984  59999999887          5899999987      5432   234 45567888999999  66777766


Q ss_pred             cC--------CeEEEEEee-cCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEE
Q psy2762         134 SD--------GTISFLTYM-SDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIK  201 (318)
Q Consensus       134 ~d--------~~i~i~~~~-~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~  201 (318)
                      .+        ..|.+|++. .+. ......+. .|...+..+.|+|+                 ++.+++++.++  .|.
T Consensus       207 ~~~~~~~~~~~~i~~~d~~~~g~-~~~~~~l~~~~~~~~~~~~~spd-----------------g~l~~~~~~~~~~~l~  268 (662)
T 3azo_A          207 WDHPRMPWEGTELKTARVTEDGR-FADTRTLLGGPEEAIAQAEWAPD-----------------GSLIVATDRTGWWNLH  268 (662)
T ss_dssp             ECTTCCTTTCEEEEEEEECTTSC-EEEEEEEEEETTBCEEEEEECTT-----------------SCEEEEECTTSSCEEE
T ss_pred             CCCCCCCCCCcEEEEEEECCCCc-ccccEEeCCCCCceEcceEECCC-----------------CeEEEEECCCCCeEEE
Confidence            54        378888875 221 01233343 45677888999997                 45677888888  555


Q ss_pred             EEEccCCeEEEEEEcccCCCC--------eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEE
Q psy2762         202 IWKQEGDKWIEETKLENHSDW--------VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWN  273 (318)
Q Consensus       202 iwd~~~~~~~~~~~~~~h~~~--------V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~  273 (318)
                      +||..+++..+.  ...+...        +..+.|+|+    +.++++++. +.++||.+..... ....+..+...+..
T Consensus       269 ~~~~~~~~~~~l--~~~~~~~~~p~w~~~~~~~~~~~~----~~~~~~~~~-~~~~l~~~d~~~~-~~~~l~~~~~~~~~  340 (662)
T 3azo_A          269 RVDPATGAATQL--CRREEEFAGPLWTPGMRWFAPLAN----GLIAVVHGK-GAAVLGILDPESG-ELVDAAGPWTEWAA  340 (662)
T ss_dssp             EECTTTCCEEES--SCCSSBSSCCCCSTTCCSEEECTT----SCEEEEEBS-SSCEEEEEETTTT-EEEECCSSCCEEEE
T ss_pred             EEECCCCceeec--ccccccccCccccccCceEeEeCC----CEEEEEEEc-CccEEEEEECCCC-cEEEecCCCCeEEE
Confidence            566656654322  2233222        567888885    788999988 9999994432111 23445555666776


Q ss_pred             E-EEcCCCCEEEEEeCCCeEEEEEECC-CCceEEEe
Q psy2762         274 V-SWSLTGDILTVSCGDNSVSLWKENT-DGAWQCIT  307 (318)
Q Consensus       274 v-~~spdg~~l~s~~~D~~v~iW~~~~-~~~~~~~~  307 (318)
                      + +++++.-.+++++.+...+||..+. +++...+.
T Consensus       341 ~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~  376 (662)
T 3azo_A          341 TLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIG  376 (662)
T ss_dssp             EEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred             EEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence            6 5554444455666777778887664 44555443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.65  E-value=3.4e-13  Score=118.96  Aligned_cols=237  Identities=10%  Similarity=0.035  Sum_probs=152.8

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-   89 (318)
                      +|...+.+++|+|+|++++++..++.|.+||.+.           ++.......+...+.+++|++  +++++++...+ 
T Consensus        42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-----------~~~~~~~~~~~~~~~~i~~~~--dg~l~v~~~~~~  108 (333)
T 2dg1_A           42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPFVSHKANPAAIKIHK--DGRLFVCYLGDF  108 (333)
T ss_dssp             SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEEECSSSSEEEEEECT--TSCEEEEECTTS
T ss_pred             ccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-----------CcEEEEeeCCCCCcceEEECC--CCcEEEEeCCCC
Confidence            4556778999999999888888899999999862           233332335667899999963  47877777666 


Q ss_pred             ---CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeeccccccc
Q psy2762          90 ---RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGC  162 (318)
Q Consensus        90 ---g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v  162 (318)
                         +.|.+||..++..........+...++++++.|+  +.++++...+    ....||.+.....  ....+..+....
T Consensus       109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~  184 (333)
T 2dg1_A          109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPIIQNISVA  184 (333)
T ss_dssp             SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEECTTSC--CEEEEEEEESSE
T ss_pred             CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC--CCEEEEeccccccCCCceEEEEeCCCC--EEEEeecCCCcc
Confidence               6899999887654322221224457899999998  5566654431    2345555533221  122222233345


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC-C-eEEE-----EEEcccCCCCeeEEEEccCCCC
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG-D-KWIE-----ETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~-~-~~~~-----~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      ..++|+|+                 +. .+++.+.++.|++||... + ....     ...+.++ ..+..++++++   
T Consensus       185 ~~i~~~~d-----------------g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~---  243 (333)
T 2dg1_A          185 NGIALSTD-----------------EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSD---  243 (333)
T ss_dssp             EEEEECTT-----------------SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTT---
T ss_pred             cceEECCC-----------------CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCC---
Confidence            67889886                 33 345556788999999853 2 2111     1122333 45788999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCC------cEEEEEEcCCCCEEEEEeCC
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDD------VVWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~------~v~~v~~spdg~~l~s~~~D  289 (318)
                       +.++++...++.|.+|+.....   ...+.....      .+.+++|+|||+.|+.++.+
T Consensus       244 -G~l~v~~~~~~~v~~~d~~g~~---~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          244 -DNLYVAMYGQGRVLVFNKRGYP---IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             -CCEEEEEETTTEEEEECTTSCE---EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             -CCEEEEEcCCCEEEEECCCCCE---EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence             7778887788999999885421   222222221      58899999998777655554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.64  E-value=3e-14  Score=138.70  Aligned_cols=252  Identities=8%  Similarity=-0.102  Sum_probs=160.6

Q ss_pred             CCCcceeeeeeecCCCCEEE-----EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe--EEEEecCCCCCcE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLA-----TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV--WQVAWAHPQFGTL   82 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~-----s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~~~~~~~~   82 (318)
                      .+|...+..++|||||++||     +|+.+.+|++||++.+           +.+.  ..+...+  ..++|++  ||+.
T Consensus       117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg-----------~~~~--~~~~~~~~~~~~~wsp--Dg~~  181 (695)
T 2bkl_A          117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG-----------EWSK--VDVIEGGKYATPKWTP--DSKG  181 (695)
T ss_dssp             SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC-----------CBCS--SCCBSCCTTCCCEECT--TSSE
T ss_pred             cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC-----------CCcC--CcccCcccccceEEec--CCCE
Confidence            46777899999999999999     5666789999999743           2110  1122222  5789974  5899


Q ss_pred             EEEEECCCe-------------EEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeec
Q psy2762          83 LASCSYDRK-------------VIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMS  145 (318)
Q Consensus        83 las~s~Dg~-------------v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~  145 (318)
                      |+.++.|..             |.+|++.++.  ...++....+...+..++|+|+  +.+++..+.++  ...+|-...
T Consensus       182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~l~~~~~  259 (695)
T 2bkl_A          182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD--GKYLFVYILRGWSENDVYWKRP  259 (695)
T ss_dssp             EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT--SCCEEEEEEETTTEEEEEEECT
T ss_pred             EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC--CCEEEEEEeCCCCceEEEEEcC
Confidence            999999887             9999998764  2344444456667899999999  45555555444  444444322


Q ss_pred             CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEec---CCCeEEEEEccCCe---EEEEEEcccC
Q psy2762         146 DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG---CDNLIKIWKQEGDK---WIEETKLENH  219 (318)
Q Consensus       146 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs---~d~~i~iwd~~~~~---~~~~~~~~~h  219 (318)
                      ...  ....+..+...+....| |+                 +..++...   .++.|.+||+.+++   +...  +..+
T Consensus       260 ~~~--~~~~l~~~~~~~~~~~~-~~-----------------g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~  317 (695)
T 2bkl_A          260 GEK--DFRLLVKGVGAKYEVHA-WK-----------------DRFYVLTDEGAPRQRVFEVDPAKPARASWKEI--VPED  317 (695)
T ss_dssp             TCS--SCEEEEECSSCCEEEEE-ET-----------------TEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE--ECCC
T ss_pred             CCC--ceEEeecCCCceEEEEe-cC-----------------CcEEEEECCCCCCCEEEEEeCCCCCccCCeEE--ecCC
Confidence            221  23445555545555555 33                 23333333   35789999987653   2221  2223


Q ss_pred             -CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEE----eCCCeEE
Q psy2762         220 -SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVS----CGDNSVS  293 (318)
Q Consensus       220 -~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~----~~D~~v~  293 (318)
                       ...|..++|+.     +.++++...|+..+||....... ....+..+ ...|..++++||++.|+.+    ...++|.
T Consensus       318 ~~~~l~~~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~  391 (695)
T 2bkl_A          318 SSASLLSVSIVG-----GHLSLEYLKDATSEVRVATLKGK-PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIY  391 (695)
T ss_dssp             SSCEEEEEEEET-----TEEEEEEEETTEEEEEEEETTCC-EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEE
T ss_pred             CCCeEEEEEEEC-----CEEEEEEEECCEEEEEEEeCCCC-eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEE
Confidence             44578888873     67899999999999986542111 12223322 4578889999999887733    3357899


Q ss_pred             EEEECCCCceEEEe
Q psy2762         294 LWKENTDGAWQCIT  307 (318)
Q Consensus       294 iW~~~~~~~~~~~~  307 (318)
                      +||+.++ +...+.
T Consensus       392 ~~d~~~g-~~~~l~  404 (695)
T 2bkl_A          392 KTSVSTG-KSELWA  404 (695)
T ss_dssp             EEETTTC-CEEEEE
T ss_pred             EEECCCC-cEEEEe
Confidence            9997654 444443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.62  E-value=2.8e-14  Score=126.03  Aligned_cols=211  Identities=8%  Similarity=-0.034  Sum_probs=127.1

Q ss_pred             eeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCCCcEEEEEE
Q psy2762          15 MIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        15 ~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+..++|+|+|+++ +++..++.|.+||+.           +++.+..+..+      ...+.+++|++  +|++|++++
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-----------t~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~~  110 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-----------TCKNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYATV  110 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETT-----------TTEEEEEEESCCSTTEEEECSSCEEECT--TSSEEEEEE
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCC-----------CCcEEEEEEcccccccccccccceEECC--CCCEEEEEc
Confidence            57889999999865 456678999999986           24555555432      23478899974  588999988


Q ss_pred             CC------------CeEEEEeCCCCcEEE-EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          88 YD------------RKVIIWRGDNGNWFK-YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        88 ~D------------g~v~vWd~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                      .+            +.|.+||+.+++... ...+. +...+.+++|+|+  +.+++ ++  +.|.+||.....   ....
T Consensus       111 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~l~~-~~--~~i~~~d~~~~~---~~~~  181 (349)
T 1jmx_B          111 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD--GSLYV-AG--PDIYKMDVKTGK---YTVA  181 (349)
T ss_dssp             EEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT--SCEEE-ES--SSEEEECTTTCC---EEEE
T ss_pred             ccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC--CcEEE-cc--CcEEEEeCCCCc---eecc
Confidence            66            999999987643211 11222 3446889999999  44444 33  348888764332   1111


Q ss_pred             ecccc--c----------------------ccceeeeCCCCC--------------------CCcccccc-------CCC
Q psy2762         155 IAAHT--I----------------------GCNAVSWGPGIG--------------------SLSELDLK-------GSK  183 (318)
Q Consensus       155 ~~~h~--~----------------------~v~~~~~~p~~~--------------------~~~~~~~~-------~~~  183 (318)
                      +..+.  .                      ....++++++..                    .....+..       ...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (349)
T 1jmx_B          182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGL  261 (349)
T ss_dssp             ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred             ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeE
Confidence            11110  0                      011122322110                    00000000       000


Q ss_pred             CCC-ccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC
Q psy2762         184 LGG-VAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       184 ~~~-~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~  256 (318)
                      +.. .+++++++  ++.|++||+.+++......   ....+.+++|+|+    +.+|++++.++.|++||..+.
T Consensus       262 ~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~d----g~~l~~~~~~~~v~v~d~~~~  326 (349)
T 1jmx_B          262 RSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKK----GDKLYLGGTFNDLAVFNPDTL  326 (349)
T ss_dssp             ECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECSS----SSCEEEESBSSEEEEEETTTT
T ss_pred             ecCCCCCEEEEE--cCeEEEEECccCeEEEEEc---CCCCccceEECCC----CCEEEEecCCCeEEEEecccc
Confidence            011 25567776  8899999998886543332   2234779999996    667777888999999998764

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.62  E-value=1.5e-13  Score=123.38  Aligned_cols=250  Identities=10%  Similarity=0.015  Sum_probs=150.0

Q ss_pred             eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCCCc
Q psy2762          18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQFGT   81 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~~~   81 (318)
                      .++|+|||++|+.++          .|++|.+||..           +.+.+.++...      ......+++++  +|+
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-----------t~~~~~~i~~~~~~~~~g~~p~~i~~sp--dg~  120 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-----------KLTFEKEISLPPKRVQGLNYDGLFRQTT--DGK  120 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-----------TCCEEEEEEECTTBCCBCCCGGGEEECT--TSS
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-----------CCcEEEEEEcCccccccCCCcceEEECC--CCC
Confidence            789999999999876          36789999986           23455555432      23456788864  589


Q ss_pred             EEEEEEC--CCeEEEEeCCCCcEEEEEE-ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          82 LLASCSY--DRKVIIWRGDNGNWFKYYE-YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        82 ~las~s~--Dg~v~vWd~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      +|+++..  +++|.+||+.+.+..  .. +..  .....+.+.|+. ...+++.+.||.+.+++.....+   ... ..+
T Consensus       121 ~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~--~~~~~v~~~p~~-~~~~~~~~~dg~~~~v~~~~~g~---~~~-~~~  191 (361)
T 2oiz_A          121 FIVLQNASPATSIGIVDVAKGDYV--EDVTAA--AGCWSVIPQPNR-PRSFMTICGDGGLLTINLGEDGK---VAS-QSR  191 (361)
T ss_dssp             EEEEEEESSSEEEEEEETTTTEEE--EEEGGG--TTEEEEEECTTS-SSEEEEEETTSSEEEEEECTTSS---EEE-EEE
T ss_pred             EEEEECCCCCCeEEEEECCCCcEE--EEEecC--CCcceeEEcCCC-CeeEEEECCCCcEEEEEECCCCc---Eee-ecc
Confidence            9988875  589999999887533  33 332  122335677874 35677888999998888743221   110 011


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE--ccc----CC----CCeeEEEE
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK--LEN----HS----DWVRDVAW  228 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~--~~~----h~----~~V~~v~~  228 (318)
                      ..    ..|.+...+.....   .+   .+..++..+.++.|.++|+..+.......  +..    +.    ....-+.|
T Consensus       192 ~~----~~~~~~~~~~~~~~---~~---~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~  261 (361)
T 2oiz_A          192 SK----QMFSVKDDPIFIAP---AL---DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL  261 (361)
T ss_dssp             CC----CCSCTTTSCBCSCC---EE---CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred             cc----ceEcCCCCceEEEe---cc---cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence            00    11222111100000   00   02345556688999999986543211111  110    11    11123789


Q ss_pred             ccCCCCCccEEEEEe----------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         229 APSWGLSKCMIASCS----------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       229 sp~~~~~~~~l~s~s----------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +|+   .+..+++.+          ...+|.+||+.+..  ....+..+.  +++++|+|||++|++++. ++|.+||..
T Consensus       262 ~~d---g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~  333 (361)
T 2oiz_A          262 HRA---SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS  333 (361)
T ss_dssp             ETT---TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred             ecC---CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence            996   233444433          13589999998753  233444444  899999999999998887 999999977


Q ss_pred             CCCceEEEee
Q psy2762         299 TDGAWQCITE  308 (318)
Q Consensus       299 ~~~~~~~~~~  308 (318)
                      ++ +.+.+..
T Consensus       334 t~-~l~~~~~  342 (361)
T 2oiz_A          334 QP-EPKLLRT  342 (361)
T ss_dssp             SS-SCEEEEE
T ss_pred             CC-cceeeEE
Confidence            64 3344444

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.60  E-value=6.3e-14  Score=137.42  Aligned_cols=250  Identities=14%  Similarity=0.149  Sum_probs=152.5

Q ss_pred             ecCCCccee-----eeeeecCCCCEEEEeeCC---------CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEE
Q psy2762           8 VDTGHEDMI-----HDAEMDYLGLYLATCSSD---------HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVA   73 (318)
Q Consensus         8 ~~~gH~~~v-----~~~~~~~~g~~l~s~s~D---------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~   73 (318)
                      +..+|....     ..+.|||||++|+.++.+         +.+.+||+..           ++ +..+..|.+.+...+
T Consensus        51 ~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-----------~~-~~~l~~~~~~~~~~~  118 (740)
T 4a5s_A           51 FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-----------RQ-LITEERIPNNTQWVT  118 (740)
T ss_dssp             EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-----------TE-ECCSSCCCTTEEEEE
T ss_pred             EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC-----------Cc-EEEcccCCCcceeeE
Confidence            445665432     236779999999998877         4556999873           33 345777888999999


Q ss_pred             ecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCe-----------------EEEEeeCCCCCcEEEEeecCC
Q psy2762          74 WAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV-----------------NSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        74 ~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~~~lasgs~d~  136 (318)
                      |++  ||+.||.++ |+.|.+|++.++...++ +..++...+                 ..++|+||  +..||..+.|.
T Consensus       119 ~SP--dG~~la~~~-~~~i~~~~~~~~~~~~l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpD--g~~la~~~~d~  192 (740)
T 4a5s_A          119 WSP--VGHKLAYVW-NNDIYVKIEPNLPSYRI-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN--GTFLAYAQFND  192 (740)
T ss_dssp             ECS--STTCEEEEE-TTEEEEESSTTSCCEEC-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT--SSEEEEEEEEC
T ss_pred             ECC--CCCEEEEEE-CCeEEEEECCCCceEEE-cCCCCccceecCcccccccchhcCCCcceEECCC--CCEEEEEEEcc
Confidence            984  599999984 78999999987754332 223333222                 35899999  67777775443


Q ss_pred             e------------------------------------EEEEEeec---CCCCcceeeec------ccccccceeeeCCCC
Q psy2762         137 T------------------------------------ISFLTYMS---DTNSWESRKIA------AHTIGCNAVSWGPGI  171 (318)
Q Consensus       137 ~------------------------------------i~i~~~~~---~~~~~~~~~~~------~h~~~v~~~~~~p~~  171 (318)
                      .                                    |.+||+..   +.. .....+.      +|...+..++|+|+ 
T Consensus       193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~wspd-  270 (740)
T 4a5s_A          193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN-ATSIQITAPASMLIGDHYLCDVTWATQ-  270 (740)
T ss_dssp             TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC-CCEEEECCCHHHHTSCEEEEEEEEEET-
T ss_pred             cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc-ceEEEecCCccCCCCCeEEEEEEEeCC-
Confidence            2                                    34444422   110 0111222      24555677888887 


Q ss_pred             CCCccccccCCCCCCccceEEEe----cCCCeEEEEEccCCe----EEEEEEc--ccCCCCee-----EEEEccCCCCCc
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSG----GCDNLIKIWKQEGDK----WIEETKL--ENHSDWVR-----DVAWAPSWGLSK  236 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasg----s~d~~i~iwd~~~~~----~~~~~~~--~~h~~~V~-----~v~~sp~~~~~~  236 (318)
                                      ++.++..    +.+..|++||..+++    +.....+  ++|..+|.     .+.|+|+    |
T Consensus       271 ----------------g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD----G  330 (740)
T 4a5s_A          271 ----------------ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD----G  330 (740)
T ss_dssp             ----------------TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT----S
T ss_pred             ----------------CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC----C
Confidence                            3433333    334479999988875    2222222  56777766     7899996    6


Q ss_pred             cEEE-EEeC-C--CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE-eC----CCeEEEEEECCCC
Q psy2762         237 CMIA-SCSQ-D--RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CG----DNSVSLWKENTDG  301 (318)
Q Consensus       237 ~~l~-s~s~-D--~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~-~~----D~~v~iW~~~~~~  301 (318)
                      +.|+ ..+. +  ..|.+|+..+...   ..+....-.|..+.+ +|++.|+-. ..    .+...||.++..|
T Consensus       331 ~~l~~~~s~~~G~~~l~~~~~~~~~~---~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g  400 (740)
T 4a5s_A          331 NSFYKIISNEEGYRHICYFQIDKKDC---TFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLID  400 (740)
T ss_dssp             SEEEEEEECTTSCEEEEEEETTCSSC---EESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTE
T ss_pred             CEEEEEEEcCCCceEEEEEECCCCce---EecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCC
Confidence            6666 6664 3  4677788776432   233323334544432 446655444 43    3467788877654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.57  E-value=2.1e-12  Score=110.16  Aligned_cols=238  Identities=9%  Similarity=0.007  Sum_probs=156.4

Q ss_pred             eeeeeeecCCCCEEE-EeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          15 MIHDAEMDYLGLYLA-TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~-s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...+++++++|++++ +.+.++.|.+||....           . ...+ ..+...+.++++.+  +++++++.. ++.|
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~-----------~-~~~~~~~~~~~p~~i~~~~--~g~l~v~~~-~~~i   89 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-----------G-TTVLPFNGLYQPQGLAVDG--AGTVYVTDF-NNRV   89 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----------------EECCCCSCCSCCCEEECT--TCCEEEEET-TTEE
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCc-----------c-cceEeeCCcCCcceeEECC--CCCEEEEcC-CCEE
Confidence            677899999999888 6578899999986521           1 1111 23335677888863  477666655 8999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      .+||...... ..... .....+.++++.|+  +.++++...++.|.+|+.  +... ..............++++|+  
T Consensus        90 ~~~d~~~~~~-~~~~~-~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~p~~i~~~~~--  160 (270)
T 1rwi_B           90 VTLAAGSNNQ-TVLPF-DGLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAA--GSKT-QTVLPFTGLNDPDGVAVDNS--  160 (270)
T ss_dssp             EEECTTCSCC-EECCC-CSCSSEEEEEECTT--CCEEEEEGGGTEEEEECT--TCCS-CEECCCCSCCSCCCEEECTT--
T ss_pred             EEEeCCCceE-eeeec-CCcCCCcceEECCC--CCEEEEECCCCEEEEEEC--CCce-eEeeccccCCCceeEEEeCC--
Confidence            9999876532 21111 22256889999997  567777777788888743  2211 11111122234566777775  


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                     ++.+++...++.|.+||..+.....  ....+...+.+|+++|+    |.++++...++.|.+|+
T Consensus       161 ---------------g~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~p~~i~~d~~----g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          161 ---------------GNVYVTDTDNNRVVKLEAESNNQVV--LPFTDITAPWGIAVDEA----GTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             ---------------CCEEEEEGGGTEEEEECTTTCCEEE--CCCSSCCSEEEEEECTT----CCEEEEETTTSCEEEEC
T ss_pred             ---------------CCEEEEECCCCEEEEEecCCCceEe--ecccCCCCceEEEECCC----CCEEEEECCCCcEEEEc
Confidence                           3556666777899999987654321  12233356889999996    67777777789999999


Q ss_pred             cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ..+....  .........+.+++++|+|+++++...++.|++++...
T Consensus       220 ~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~  264 (270)
T 1rwi_B          220 AGSTTST--VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE  264 (270)
T ss_dssp             TTCSCCE--ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred             CCCCcce--eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence            8664321  11112235688999999999888888899999998654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.55  E-value=2.5e-12  Score=113.37  Aligned_cols=238  Identities=10%  Similarity=0.053  Sum_probs=158.5

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...|.++.|++++..+++.+.++.+++|.-              .....+..+...+.+++|++  ++++++++..++.|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~g~l~~~~~~~~~i   68 (333)
T 2dg1_A            5 QQDLPTLFYSGKSNSAVPIISESELQTITA--------------EPWLEISKKGLQLEGLNFDR--QGQLFLLDVFEGNI   68 (333)
T ss_dssp             -CCCCBCCSCGGGGCSSCCCCGGGSCEEEC--------------EEEEEEESSCCCEEEEEECT--TSCEEEEETTTCEE
T ss_pred             ccccceeeecCCccceeEEeecccCccccc--------------ceeEEEeccCccccCcEECC--CCCEEEEECCCCEE
Confidence            346788999999988888888999999932              34566777777889999973  58888888889999


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeec--ccccccceee
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIA--AHTIGCNAVS  166 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~  166 (318)
                      .+||..+++.....  ..+...+.+++++|+  +.++++...+    +.|.+|+.....  .. ..+.  .+...+..+.
T Consensus        69 ~~~d~~~~~~~~~~--~~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~--~~-~~~~~~~~~~~~~~i~  141 (333)
T 2dg1_A           69 FKINPETKEIKRPF--VSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDN--LQ-DIIEDLSTAYCIDDMV  141 (333)
T ss_dssp             EEECTTTCCEEEEE--ECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCS--CE-EEECSSSSCCCEEEEE
T ss_pred             EEEeCCCCcEEEEe--eCCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCE--EE-EEEccCccCCcccceE
Confidence            99999877643322  235678999999998  5667766655    578887753222  11 1111  2334567788


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EE
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MI  239 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l  239 (318)
                      ++|+                 +..+++...      .+.|..+|.++++....   ..+...+..++|+|+    +. ++
T Consensus       142 ~d~~-----------------g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~d----g~~l~  197 (333)
T 2dg1_A          142 FDSK-----------------GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI---IQNISVANGIALSTD----EKVLW  197 (333)
T ss_dssp             ECTT-----------------SCEEEEECCCBTTBCCEEEEEECTTSCCEEEE---EEEESSEEEEEECTT----SSEEE
T ss_pred             ECCC-----------------CCEEEEeccccccCCCceEEEEeCCCCEEEEe---ecCCCcccceEECCC----CCEEE
Confidence            8886                 344454443      24566666555443222   122334789999996    55 44


Q ss_pred             EEEeCCCeEEEEEcCCC-cceee---EEeeecC--CcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         240 ASCSQDRKVIIWTSNDY-VTWTP---FIMNTFD--DVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~-~~~~~---~~~~~~~--~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ++.+.++.|.+|+.... .....   .......  ..+..++++++|+++++...++.|.+|+.
T Consensus       198 v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~  261 (333)
T 2dg1_A          198 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  261 (333)
T ss_dssp             EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             EEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence            55566889999998532 11110   1111112  36788999999999888888899999985

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.55  E-value=1.5e-12  Score=127.76  Aligned_cols=247  Identities=13%  Similarity=0.008  Sum_probs=151.3

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCC-----CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSD-----HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      ..+|...+..++|||||++|+.++.+     .+|++||++.           ++.+.. ..+...+..++|++  | +.|
T Consensus       158 ~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~t-----------g~~~~~-~~~~~~~~~~~wsp--D-~~l  222 (741)
T 1yr2_A          158 AKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVAD-----------GKPLAD-ELKWVKFSGLAWLG--N-DAL  222 (741)
T ss_dssp             C----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTT-----------CCEEEE-EEEEEESCCCEEST--T-SEE
T ss_pred             ccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCC-----------CCCCCc-cCCCceeccEEEEC--C-CEE
Confidence            34555678899999999999887654     4699999973           233221 11222235788973  5 778


Q ss_pred             EEEECCCe--------------EEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-----CeEEEEE
Q psy2762          84 ASCSYDRK--------------VIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-----GTISFLT  142 (318)
Q Consensus        84 as~s~Dg~--------------v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-----~~i~i~~  142 (318)
                      +.++.|+.              |.+|++.++.  ...++....+...+..++|+|+  +.+++..+.+     ..|.+|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~l~~~d  300 (741)
T 1yr2_A          223 LYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSD--GRWVVITSSEGTDPVNTVHVAR  300 (741)
T ss_dssp             EEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTT--SCEEEEEEECTTCSCCEEEEEE
T ss_pred             EEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCC--CCEEEEEEEccCCCcceEEEEE
Confidence            88777664              8899987654  2334433334446889999999  5566665544     3788888


Q ss_pred             eecCCCCcc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC----CCeEEEEEccCC--eEEEEEE
Q psy2762         143 YMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC----DNLIKIWKQEGD--KWIEETK  215 (318)
Q Consensus       143 ~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~----d~~i~iwd~~~~--~~~~~~~  215 (318)
                      ...+.  .. ...+..+........ +|+                 +..|+..+.    ++.|.+||+.+.  ++...  
T Consensus       301 ~~~~~--~~~~~~l~~~~~~~~~~~-~~d-----------------g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l--  358 (741)
T 1yr2_A          301 VTNGK--IGPVTALIPDLKAQWDFV-DGV-----------------GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV--  358 (741)
T ss_dssp             EETTE--ECCCEEEECSSSSCEEEE-EEE-----------------TTEEEEEECTTCTTCEEEEEECSSSSCEEEEE--
T ss_pred             CCCCC--CcccEEecCCCCceEEEE-ecc-----------------CCEEEEEECCCCCCCEEEEEeCCCCccccEEE--
Confidence            75431  11 233444433333332 243                 345555554    445999998763  33322  


Q ss_pred             cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEEEEE----eCCC
Q psy2762         216 LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDILTVS----CGDN  290 (318)
Q Consensus       216 ~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l~s~----~~D~  290 (318)
                      +..+...+..++|+.     +.++++...|+..+||....... ....+.. ....|..++++||++.|+.+    ...+
T Consensus       359 ~~~~~~~l~~~~~~~-----~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~  432 (741)
T 1yr2_A          359 VPESKDNLESVGIAG-----NRLFASYIHDAKSQVLAFDLDGK-PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPA  432 (741)
T ss_dssp             ECCCSSEEEEEEEEB-----TEEEEEEEETTEEEEEEEETTSC-EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEE
T ss_pred             ecCCCCeEEEEEEEC-----CEEEEEEEECCEEEEEEEeCCCC-ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence            345555577788863     67889999999988886542111 1222322 34678999999999876633    2357


Q ss_pred             eEEEEEECCC
Q psy2762         291 SVSLWKENTD  300 (318)
Q Consensus       291 ~v~iW~~~~~  300 (318)
                      ++.+||+.++
T Consensus       433 ~i~~~d~~tg  442 (741)
T 1yr2_A          433 TVLALDPATA  442 (741)
T ss_dssp             EEEEEETTTT
T ss_pred             EEEEEECCCC
Confidence            8889986553

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.54  E-value=7.6e-11  Score=101.60  Aligned_cols=250  Identities=14%  Similarity=0.050  Sum_probs=165.4

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..+...+.+++++++|+++++...++.|.+||.. .          ......+..+...+.++++.+  ++.++++...+
T Consensus        11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~   77 (299)
T 2z2n_A           11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G----------KITEYPLPTPDAKVMCLTISS--DGEVWFTENAA   77 (299)
T ss_dssp             CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C----------CEEEEECSSTTCCEEEEEECT--TSCEEEEETTT
T ss_pred             CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C----------CeEEecCCcccCceeeEEECC--CCCEEEeCCCC
Confidence            3456789999999999988877778899999875 2          111122233456788999863  57877777668


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      +.|..||.. +.. ..+.+......+.++++.|+  +.++++...++.|..++. .+.  ........+...+..+++.|
T Consensus        78 ~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g~--~~~~~~~~~~~~~~~i~~~~  150 (299)
T 2z2n_A           78 NKIGRITKK-GII-KEYTLPNPDSAPYGITEGPN--GDIWFTEMNGNRIGRITD-DGK--IREYELPNKGSYPSFITLGS  150 (299)
T ss_dssp             TEEEEECTT-SCE-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECT
T ss_pred             CeEEEECCC-CcE-EEEeCCCcCCCceeeEECCC--CCEEEEecCCceEEEECC-CCC--EEEecCCCCCCCCceEEEcC
Confidence            999999976 332 33333334567899999987  567777666778888765 221  11111112233456677776


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +                 +..+++...++.|.+||. +++... ..+..+...+.+++++|+    +.++++...++.|.
T Consensus       151 ~-----------------g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~----g~l~v~~~~~~~i~  207 (299)
T 2z2n_A          151 D-----------------NALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGND----DALWFVEIIGNKIG  207 (299)
T ss_dssp             T-----------------SCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTT----SSEEEEETTTTEEE
T ss_pred             C-----------------CCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCC----CCEEEEccCCceEE
Confidence            5                 345666666789999998 555432 233444556889999985    66777766788999


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      +|+. +.. ............+..++++|+|+++++...++.|..|+.  .+....+
T Consensus       208 ~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g~~~~~  260 (299)
T 2z2n_A          208 RITT-SGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS--NNIIEEY  260 (299)
T ss_dssp             EECT-TCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET--TTEEEEE
T ss_pred             EECC-CCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC--CCceEEE
Confidence            9998 332 111112223457899999999997776657789999985  3444433

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.54  E-value=6.8e-12  Score=111.03  Aligned_cols=227  Identities=15%  Similarity=0.081  Sum_probs=143.1

Q ss_pred             CcceeeeeeecCCCCEEEEee---------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcE
Q psy2762          12 HEDMIHDAEMDYLGLYLATCS---------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s---------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      .-..+..+++  ||++|+...         .++.|.+||++..           .. ..+    ..+..+.|++  +|++
T Consensus        13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~-----------~~-~~l----~~~~~~~~Sp--Dg~~   72 (347)
T 2gop_A           13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN-----------AR-RFI----ENATMPRISP--DGKK   72 (347)
T ss_dssp             CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC-----------CE-EEE----ESCEEEEECT--TSSE
T ss_pred             eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC-----------ce-EEc----ccCCCeEECC--CCCE
Confidence            3456778888  999887642         3677889988632           22 223    5688899974  5898


Q ss_pred             EEEEECC---Ce--EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----------------------
Q psy2762          83 LASCSYD---RK--VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----------------------  135 (318)
Q Consensus        83 las~s~D---g~--v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----------------------  135 (318)
                      ||.++.+   +.  |.+|++.+++......   +.. +..++|+|+  +..|+.++.+                      
T Consensus        73 la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  146 (347)
T 2gop_A           73 IAFMRANEEKKVSEIWVADLETLSSKKILE---AKN-IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF  146 (347)
T ss_dssp             EEEEEEETTTTEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTT--SSEEEEEEECCCC---------CCCC------
T ss_pred             EEEEEeccCCCcceEEEEECCCCceEEEEc---CCC-ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence            9888764   34  6677877765444332   233 899999999  5566665532                      


Q ss_pred             -----CeEEEEEeecCCCCcce-eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-------eEEE
Q psy2762         136 -----GTISFLTYMSDTNSWES-RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-------LIKI  202 (318)
Q Consensus       136 -----~~i~i~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-------~i~i  202 (318)
                           ..|.+|+...+    +. ..+.. . .+..+.|+|+                 + .+++++.+.       ..+|
T Consensus       147 ~~~~~~~l~~~d~~~~----~~~~~l~~-~-~~~~~~~spd-----------------g-~~~~~~~~~~~~~~~~~~~l  202 (347)
T 2gop_A          147 FDGEKTTFWIFDTESE----EVIEEFEK-P-RFSSGIWHRD-----------------K-IVVNVPHREIIPQYFKFWDI  202 (347)
T ss_dssp             ---CEEEEEEEETTTT----EEEEEEEE-E-TTCEEEEETT-----------------E-EEEEEECCCSSCCSSCCEEE
T ss_pred             ccCccceEEEEECCCC----eEEeeecC-C-CcccccCCCC-----------------e-EEEEEecccccccccccccE
Confidence                 45666765322    12 33333 3 6788899996                 4 555554432       4455


Q ss_pred             EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC--------eEEEEEcCCCcceeeEEeeecCCcEEE-
Q psy2762         203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR--------KVIIWTSNDYVTWTPFIMNTFDDVVWN-  273 (318)
Q Consensus       203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~--------~i~vw~~~~~~~~~~~~~~~~~~~v~~-  273 (318)
                      |..++++....   ..+ ..+..+  +|+    |..|+.++.+.        .|.+|+ .. .  .......+...+.. 
T Consensus       203 ~~~d~~~~~~l---~~~-~~~~~~--spd----g~~l~~~~~~~~~~~~~~~~l~~~d-~~-~--~~~l~~~~~~~~~~~  268 (347)
T 2gop_A          203 YIWEDGKEEKM---FEK-VSFYAV--DSD----GERILLYGKPEKKYMSEHNKLYIYD-GK-E--VMGILDEVDRGVGQA  268 (347)
T ss_dssp             EEEETTEEEEE---EEE-ESEEEE--EEC----SSCEEEEECCSSSCCCSSCEEEEEC-SS-C--EEESSTTCCSEEEEE
T ss_pred             EEeCCCceEEe---ccC-cceeeE--CCC----CCEEEEEEccccCCccccceEEEEC-CC-c--eEeccccCCcccCCc
Confidence            55445543322   223 445444  886    77787777553        677777 22 1  11222344567876 


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      +.|+ || ++++++.|+.++|| ++ .|+...+
T Consensus       269 ~~~s-dg-~~~~~~~~~~~~l~-~~-~g~~~~~  297 (347)
T 2gop_A          269 KIKD-GK-VYFTLFEEGSVNLY-IW-DGEIKPI  297 (347)
T ss_dssp             EEET-TE-EEEEEEETTEEEEE-EE-SSSEEEE
T ss_pred             cEEc-Cc-EEEEEecCCcEEEE-Ec-CCceEEE
Confidence            9999 99 99999999999999 88 5654433

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.52  E-value=1.5e-11  Score=105.95  Aligned_cols=201  Identities=16%  Similarity=0.189  Sum_probs=137.0

Q ss_pred             CCcceeeeeee-cCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEE
Q psy2762          11 GHEDMIHDAEM-DYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        11 gH~~~v~~~~~-~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +|...+..+++ .++|.++++... ++.|++||.+            ++.+..+. .+...+.++++.+  +++++++..
T Consensus        74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~------------g~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~  139 (286)
T 1q7f_A           74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY------------GQFVRKFGATILQHPRGVTVDN--KGRIIVVEC  139 (286)
T ss_dssp             TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT------------SCEEEEECTTTCSCEEEEEECT--TSCEEEEET
T ss_pred             ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC------------CcEEEEecCccCCCceEEEEeC--CCCEEEEEC
Confidence            45567888999 578887777643 8999999853            34455553 3456788999863  588888877


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV  165 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~  165 (318)
                      .++.|.+||... +....+....+...+.+|+++|+  +.++++...++.|.+|+.. ..   ....+.  ++...+..+
T Consensus       140 ~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~---~~~~~~~~g~~~~p~~i  212 (286)
T 1q7f_A          140 KVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRAHCVKVFNYE-GQ---YLRQIGGEGITNYPIGV  212 (286)
T ss_dssp             TTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSS--SEEEEEEGGGTEEEEEETT-CC---EEEEESCTTTSCSEEEE
T ss_pred             CCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCC--CCEEEEECCCCEEEEEcCC-CC---EEEEEccCCccCCCcEE
Confidence            889999999654 43333332244556899999998  6678887888999999852 21   122232  222445678


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCC-eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ  244 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~  244 (318)
                      +++|+                 ++.+++...++ .|++||.... .............+.+++++|+    +.++++ +.
T Consensus       213 ~~d~~-----------------G~l~v~~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~----g~l~vs-~~  269 (286)
T 1q7f_A          213 GINSN-----------------GEILIADNHNNFNLTIFTQDGQ-LISALESKVKHAQCFDVALMDD----GSVVLA-SK  269 (286)
T ss_dssp             EECTT-----------------CCEEEEECSSSCEEEEECTTSC-EEEEEEESSCCSCEEEEEEETT----TEEEEE-ET
T ss_pred             EECCC-----------------CCEEEEeCCCCEEEEEECCCCC-EEEEEcccCCCCcceeEEECCC----CcEEEE-CC
Confidence            88875                 45677777775 9999997643 3222222222334789999996    777776 67


Q ss_pred             CCeEEEEEcCC
Q psy2762         245 DRKVIIWTSND  255 (318)
Q Consensus       245 D~~i~vw~~~~  255 (318)
                      |++|++|+...
T Consensus       270 ~~~v~v~~~~~  280 (286)
T 1q7f_A          270 DYRLYIYRYVQ  280 (286)
T ss_dssp             TTEEEEEECSC
T ss_pred             CCeEEEEEccc
Confidence            99999998754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.52  E-value=4.5e-11  Score=103.16  Aligned_cols=231  Identities=11%  Similarity=0.060  Sum_probs=152.8

Q ss_pred             CCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc
Q psy2762          23 YLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN  101 (318)
Q Consensus        23 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~  101 (318)
                      ..+++|++++.|+.|.+||.+           +++.+-.+..+. ..+.++.+.+  +|++|+  +.++.|..||. +++
T Consensus         3 ~~~~~lv~~~~~~~v~~~d~~-----------tG~~~w~~~~~~~~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~   66 (276)
T 3no2_A            3 SPQHLLVGGSGWNKIAIINKD-----------TKEIVWEYPLEKGWECNSVAATK--AGEILF--SYSKGAKMITR-DGR   66 (276)
T ss_dssp             CCCEEEEECTTCSEEEEEETT-----------TTEEEEEEECCTTCCCCEEEECT--TSCEEE--ECBSEEEEECT-TSC
T ss_pred             CCCcEEEeeCCCCEEEEEECC-----------CCeEEEEeCCCccCCCcCeEECC--CCCEEE--eCCCCEEEECC-CCC
Confidence            356889999999999999985           467787887766 4678888864  588888  45889999998 565


Q ss_pred             EEEEEEecCC-CcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeeec------ccccccceeeeCCCCCC
Q psy2762         102 WFKYYEYNNH-DSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKIA------AHTIGCNAVSWGPGIGS  173 (318)
Q Consensus       102 ~~~~~~~~~h-~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~  173 (318)
                        .++++..+ ...+.++.+.|+  +.++++.+. ++.|..++. .++   .+..+.      .+......++..++   
T Consensus        67 --~~W~~~~~~~~~~~~~~~~~d--G~~lv~~~~~~~~v~~vd~-~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~---  135 (276)
T 3no2_A           67 --ELWNIAAPAGCEMQTARILPD--GNALVAWCGHPSTILEVNM-KGE---VLSKTEFETGIERPHAQFRQINKNKK---  135 (276)
T ss_dssp             --EEEEEECCTTCEEEEEEECTT--SCEEEEEESTTEEEEEECT-TSC---EEEEEEECCSCSSGGGSCSCCEECTT---
T ss_pred             --EEEEEcCCCCccccccEECCC--CCEEEEecCCCCEEEEEeC-CCC---EEEEEeccCCCCcccccccCceECCC---
Confidence              34445443 346888999998  667777665 555544442 121   111111      11112223334443   


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                                    +.++++.+.++.|..||.+ ++..-.  +... ..+.++...|+    +..+++++.++.|..+|.
T Consensus       136 --------------G~~lv~~~~~~~v~~~d~~-G~~~w~--~~~~-~~~~~~~~~~~----g~~~v~~~~~~~v~~~d~  193 (276)
T 3no2_A          136 --------------GNYLVPLFATSEVREIAPN-GQLLNS--VKLS-GTPFSSAFLDN----GDCLVACGDAHCFVQLNL  193 (276)
T ss_dssp             --------------SCEEEEETTTTEEEEECTT-SCEEEE--EECS-SCCCEEEECTT----SCEEEECBTTSEEEEECT
T ss_pred             --------------CCEEEEecCCCEEEEECCC-CCEEEE--EECC-CCccceeEcCC----CCEEEEeCCCCeEEEEeC
Confidence                          5789999999999999988 554333  3322 34567778775    778888888889999998


Q ss_pred             CCC-cceeeEEe--ee-cCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEEECCCCc
Q psy2762         254 NDY-VTWTPFIM--NT-FDDVVWNVSWSLTGDILTVSCGD--------NSVSLWKENTDGA  302 (318)
Q Consensus       254 ~~~-~~~~~~~~--~~-~~~~v~~v~~spdg~~l~s~~~D--------~~v~iW~~~~~~~  302 (318)
                      .+. ..|+....  .+ ....+..+...++|+.+++....        +..++.+++..|+
T Consensus       194 ~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~  254 (276)
T 3no2_A          194 ESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK  254 (276)
T ss_dssp             TTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB
T ss_pred             cCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC
Confidence            843 23322110  00 11347889999999999887422        2457888877775

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.50  E-value=7.3e-11  Score=102.76  Aligned_cols=245  Identities=9%  Similarity=0.061  Sum_probs=153.8

Q ss_pred             ceeeeeeecCCCCEEEE-------eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-----cccccCeEEEEecCCCC-C
Q psy2762          14 DMIHDAEMDYLGLYLAT-------CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-----KGHSGPVWQVAWAHPQF-G   80 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s-------~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-----~~h~~~V~~v~~~~~~~-~   80 (318)
                      ....+++|+++|.++++       +..++.|.+||...           ++.. .+     .++...+.++.+.+  + +
T Consensus        18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-----------g~~~-~~~~~~~~~~~~~~~~i~~~~--~~g   83 (314)
T 1pjx_A           18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-----------GKKT-VICKPEVNGYGGIPAGCQCDR--DAN   83 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-----------CCEE-EEECCEETTEECCEEEEEECS--SSS
T ss_pred             CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-----------CcEE-EEEecccCCCCCCCceEEEec--CCC
Confidence            35678999999998888       67889999998752           2221 22     23667789999863  4 5


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEE-EEec-C-CCcCeEEEEeeCCCCCcEEEEeecCC-------------eEEEEEee
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKY-YEYN-N-HDSSVNSIAWAPKEFGLILACGSSDG-------------TISFLTYM  144 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~-~~~~-~-h~~~v~~v~~~p~~~~~~lasgs~d~-------------~i~i~~~~  144 (318)
                      ++++ ++.+..|.+||.. ++.... .... . +...+.++++.|+  +.++++...++             ...+|.+.
T Consensus        84 ~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~  159 (314)
T 1pjx_A           84 QLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFT  159 (314)
T ss_dssp             EEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred             cEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEEC
Confidence            5444 4445578899987 653222 1111 1 1235889999998  55666655441             13444442


Q ss_pred             cCCCCcceeeecccccccceeeeC----CCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEcc-CCeEE---EEEE
Q psy2762         145 SDTNSWESRKIAAHTIGCNAVSWG----PGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQE-GDKWI---EETK  215 (318)
Q Consensus       145 ~~~~~~~~~~~~~h~~~v~~~~~~----p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~-~~~~~---~~~~  215 (318)
                      .. .  ....+..+......++|+    |+                 ++. +++...++.|++||.+ .++..   ....
T Consensus       160 ~~-g--~~~~~~~~~~~~~~i~~~~~~d~d-----------------g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~  219 (314)
T 1pjx_A          160 TD-G--QMIQVDTAFQFPNGIAVRHMNDGR-----------------PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH  219 (314)
T ss_dssp             TT-S--CEEEEEEEESSEEEEEEEECTTSC-----------------EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred             CC-C--CEEEeccCCCCcceEEEecccCCC-----------------CCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence            22 1  122222233334667777    75                 333 4555678899999976 44321   1233


Q ss_pred             cccCC-CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEE-EEeCCCeEE
Q psy2762         216 LENHS-DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILT-VSCGDNSVS  293 (318)
Q Consensus       216 ~~~h~-~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~-s~~~D~~v~  293 (318)
                      +.++. ..+..++++++    |.++++...++.|.+|+..+...  ......+...+.+++|+|+|+.|. +...++.|.
T Consensus       220 ~~~~~~~~p~~i~~d~~----G~l~v~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~  293 (314)
T 1pjx_A          220 IPGTHEGGADGMDFDED----NNLLVANWGSSHIEVFGPDGGQP--KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW  293 (314)
T ss_dssp             CCCCSSCEEEEEEEBTT----CCEEEEEETTTEEEEECTTCBSC--SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             CCCCCCCCCCceEECCC----CCEEEEEcCCCEEEEEcCCCCcE--eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence            44444 56788999996    77888877889999999873321  122333346789999999999554 445568999


Q ss_pred             EEEECCCCc
Q psy2762         294 LWKENTDGA  302 (318)
Q Consensus       294 iW~~~~~~~  302 (318)
                      .|+.+..|.
T Consensus       294 ~~~~~~~g~  302 (314)
T 1pjx_A          294 KFEWQRNGK  302 (314)
T ss_dssp             EEECSSCBC
T ss_pred             EEeCCCCCc
Confidence            999877653

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.48  E-value=7.3e-11  Score=104.31  Aligned_cols=238  Identities=8%  Similarity=0.036  Sum_probs=147.7

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      ....+.+. .+++.++...+++|.+||..           +++.+.++. .......+++++  ++.++++...++.|.+
T Consensus        45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~-----------t~~~~~~i~-~~~~p~~i~~~~--~g~lyv~~~~~~~v~~  109 (328)
T 3dsm_A           45 VAQSMVIR-DGIGWIVVNNSHVIFAIDIN-----------TFKEVGRIT-GFTSPRYIHFLS--DEKAYVTQIWDYRIFI  109 (328)
T ss_dssp             CEEEEEEE-TTEEEEEEGGGTEEEEEETT-----------TCCEEEEEE-CCSSEEEEEEEE--TTEEEEEEBSCSEEEE
T ss_pred             cceEEEEE-CCEEEEEEcCCCEEEEEECc-----------ccEEEEEcC-CCCCCcEEEEeC--CCeEEEEECCCCeEEE
Confidence            34566663 34555556678999999986           356667764 345678888863  3655555558999999


Q ss_pred             EeCCCCcEEEEEEecC---CCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          95 WRGDNGNWFKYYEYNN---HDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      ||..+.+.........   .......+++ ..  +.++++.. .++.|.++|.....   ....+.. ......+.++|+
T Consensus       110 iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~--~~lyv~~~~~~~~v~viD~~t~~---~~~~i~~-g~~p~~i~~~~d  182 (328)
T 3dsm_A          110 INPKTYEITGYIECPDMDMESGSTEQMVQ-YG--KYVYVNCWSYQNRILKIDTETDK---VVDELTI-GIQPTSLVMDKY  182 (328)
T ss_dssp             EETTTTEEEEEEECTTCCTTTCBCCCEEE-ET--TEEEEEECTTCCEEEEEETTTTE---EEEEEEC-SSCBCCCEECTT
T ss_pred             EECCCCeEEEEEEcCCccccCCCcceEEE-EC--CEEEEEcCCCCCEEEEEECCCCe---EEEEEEc-CCCccceEEcCC
Confidence            9998876544333321   0014456777 33  55666654 48899999864332   1122221 122345666765


Q ss_pred             CCCCccccccCCCCCCccceEEEecCC----------CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCD----------NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d----------~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                                       ++.++++..+          +.|.++|..+++......+.. ......++|+|+    +..|.
T Consensus       183 -----------------G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d----~~~ly  240 (328)
T 3dsm_A          183 -----------------NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGT----RDTLY  240 (328)
T ss_dssp             -----------------SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTT----SCEEE
T ss_pred             -----------------CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecC----CCEEE
Confidence                             3555555544          789999998876544333321 235789999996    55565


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEE----eCCCeEEEEEEC
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVS----CGDNSVSLWKEN  298 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~----~~D~~v~iW~~~  298 (318)
                      .+..  .|.+||..+..................++++| +|+.+++.    ..+++|.+|+.+
T Consensus       241 v~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          241 WINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             EESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred             EEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence            5543  89999987643211011111135688999999 56666655    568899999866

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.43  E-value=2.1e-09  Score=92.53  Aligned_cols=247  Identities=12%  Similarity=0.028  Sum_probs=161.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      .....+.++.++++|++.++...++.|.+||.. .           +.. ..+..+...+.++.+.+  ++.++++...+
T Consensus        17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~-----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~   82 (300)
T 2qc5_A           17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G-----------RIKEFEVPTPDAKVMCLIVSS--LGDIWFTENGA   82 (300)
T ss_dssp             STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-----------CEEEEECSSTTCCEEEEEECT--TSCEEEEETTT
T ss_pred             CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C-----------ceEEEECCCCCCcceeEEECC--CCCEEEEecCC
Confidence            345678899999999998887778999999875 2           111 22334446788898853  57777776668


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      +.|..+|.. +.. ..+.+......+.++++.++  +.++++...++.|..++.. +  ......+......+..+++.|
T Consensus        83 ~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g--~~~~~~~~~~~~~~~~i~~d~  155 (300)
T 2qc5_A           83 NKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD-G--TIYEYDLPNKGSYPAFITLGS  155 (300)
T ss_dssp             TEEEEECTT-SCE-EEEECSSTTCCEEEEEECST--TCEEEEETTTTEEEEECTT-S--CEEEEECSSTTCCEEEEEECT
T ss_pred             CeEEEECCC-CCe-EEecCCCCCCCCccceECCC--CCEEEEccCCCeEEEECCC-C--CEEEccCCCCCCCceeEEECC
Confidence            899999987 543 33344434467899999987  5667766667777777642 1  111111112223455666766


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEE
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI  249 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~  249 (318)
                      +                 ++.+++...++.|..+|. .++... .....+...+..+.++++    +.++++....+.|.
T Consensus       156 ~-----------------g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~----g~l~v~~~~~~~i~  212 (300)
T 2qc5_A          156 D-----------------NALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGND----GALWFVEIMGNKIG  212 (300)
T ss_dssp             T-----------------SSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTT----SSEEEEETTTTEEE
T ss_pred             C-----------------CCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCC----CCEEEEccCCCEEE
Confidence            4                 345556666788999998 444332 334445566899999985    66676666677899


Q ss_pred             EEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       250 vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      +|+.....  ...........+.+++++|+|++.++...++.|..++.  .+....
T Consensus       213 ~~~~~g~~--~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~--~g~~~~  264 (300)
T 2qc5_A          213 RITTTGEI--SEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN--DNTIQE  264 (300)
T ss_dssp             EECTTCCE--EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT--TSCEEE
T ss_pred             EEcCCCcE--EEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC--CCcEEE
Confidence            99874321  11112223456889999999997776666788988875  455443

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.42  E-value=2e-09  Score=92.62  Aligned_cols=241  Identities=11%  Similarity=0.016  Sum_probs=156.5

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      +...+..++++++|.++++...++.|..||.+..           .....+......+.++.+.+  ++.++++...++.
T Consensus        55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----------~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~  121 (299)
T 2z2n_A           55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-----------IKEYTLPNPDSAPYGITEGP--NGDIWFTEMNGNR  121 (299)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-----------EEEEECSSTTCCEEEEEECT--TSCEEEEETTTTE
T ss_pred             ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-----------EEEEeCCCcCCCceeeEECC--CCCEEEEecCCce
Confidence            4467889999999999888777889999986411           11122233455788899863  5787777777889


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      |.+||. ++.. .......+...+.++++.|+  +.+.++...++.|..++. .+.  ........+...+..+++.|+ 
T Consensus       122 i~~~d~-~g~~-~~~~~~~~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~-~g~--~~~~~~~~~~~~~~~i~~~~~-  193 (299)
T 2z2n_A          122 IGRITD-DGKI-REYELPNKGSYPSFITLGSD--NALWFTENQNNAIGRITE-SGD--ITEFKIPTPASGPVGITKGND-  193 (299)
T ss_dssp             EEEECT-TCCE-EEEECSSTTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECTT-
T ss_pred             EEEECC-CCCE-EEecCCCCCCCCceEEEcCC--CCEEEEeCCCCEEEEEcC-CCc--EEEeeCCCCCCcceeEEECCC-
Confidence            999998 4443 23333334567899999987  566766666778888765 221  111111222334556777765 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      +..+++...++.|.+||. +++.. ...+..+...+.++.++|+    |.++++...++.|.+|
T Consensus       194 ----------------g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~----g~l~v~~~~~~~i~~~  251 (299)
T 2z2n_A          194 ----------------DALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAG----IDLWFTEWGANKIGRL  251 (299)
T ss_dssp             ----------------SSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST----TCEEEEETTTTEEEEE
T ss_pred             ----------------CCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCC----CCEEEeccCCceEEEE
Confidence                            345566666789999998 55532 2334455667899999986    6666666678899999


Q ss_pred             EcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         252 TSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +... . ............+.++++ ++|++.++.. .+.+..++...
T Consensus       252 d~~g-~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~  295 (299)
T 2z2n_A          252 TSNN-I-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK  295 (299)
T ss_dssp             ETTT-E-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred             CCCC-c-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence            9843 1 111112233457899999 9998877665 45555565443

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.42  E-value=7.8e-11  Score=104.06  Aligned_cols=211  Identities=13%  Similarity=0.093  Sum_probs=138.7

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECC------------------------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEee
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYD------------------------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA  121 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~D------------------------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~  121 (318)
                      -+.|.++++++  +|+++++...+                        ++|.+||..+++..... ..++-..+..|++.
T Consensus        23 l~~v~~va~d~--~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~p~gia~d   99 (329)
T 3fvz_A           23 PGQVSGVALDS--KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS-GKNLFYLPHGLSID   99 (329)
T ss_dssp             CSCEEEEEECT--TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE-CTTTCSSEEEEEEC
T ss_pred             cCCceEEEECC--CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc-CCCccCCceEEEEC
Confidence            46789999963  58888888877                        47999998877654322 12344578899999


Q ss_pred             CCCCCcEEEEeecCCeEEEEEeecCCCCcceeee---------cccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKI---------AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       122 p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      |+  +.++++...++.|..|+.....  ..+..+         ..+......++++|+.                +..++
T Consensus       100 ~~--g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~----------------g~lyv  159 (329)
T 3fvz_A          100 TD--GNYWVTDVALHQVFKLDPHSKE--GPLLILGRSMQPGSDQNHFCQPTDVAVEPST----------------GAVFV  159 (329)
T ss_dssp             TT--SCEEEEETTTTEEEEECTTCSS--CCSEEESBTTBCCCSTTCCSSEEEEEECTTT----------------CCEEE
T ss_pred             CC--CCEEEEECCCCEEEEEeCCCCe--EEEEEecccCCCCCCccccCCCcEEEEeCCC----------------CeEEE
Confidence            98  6688888888999998752111  011222         1222345678888732                45667


Q ss_pred             Eec-CCCeEEEEEccCCeEEEEEEcc--------cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE
Q psy2762         193 SGG-CDNLIKIWKQEGDKWIEETKLE--------NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI  263 (318)
Q Consensus       193 sgs-~d~~i~iwd~~~~~~~~~~~~~--------~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~  263 (318)
                      +.+ .++.|++|+.+. +........        ++-.....|+++|+   .+.++++...++.|++|+..+...  ...
T Consensus       160 ~d~~~~~~I~~~~~~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~v~d~~~~~I~~~~~~~G~~--~~~  233 (329)
T 3fvz_A          160 SDGYCNSRIVQFSPSG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPH---LDQLCVADRENGRIQCFKTDTKEF--VRE  233 (329)
T ss_dssp             EECSSCCEEEEECTTS-CEEEEECEECCSSSCCTTEESCEEEEEEETT---TTEEEEEETTTTEEEEEETTTCCE--EEE
T ss_pred             EeCCCCCeEEEEcCCC-CEEEEeccCCCCCCCCCcccCCCcEEEEECC---CCEEEEEECCCCEEEEEECCCCcE--EEE
Confidence            776 689999999654 332222111        22344789999996   377888888899999999874321  122


Q ss_pred             e--eecCCcEEEEEEcC------CCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         264 M--NTFDDVVWNVSWSL------TGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       264 ~--~~~~~~v~~v~~sp------dg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      +  ..+...+.+++|+|      +|+.+++...+.++++|+...+.....
T Consensus       234 ~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~  283 (329)
T 3fvz_A          234 IKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV  283 (329)
T ss_dssp             ECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred             EeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence            2  23456788999999      444444444556999999776644443

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.41  E-value=2e-11  Score=118.76  Aligned_cols=239  Identities=10%  Similarity=0.025  Sum_probs=149.5

Q ss_pred             cCCCCEEEEeeCCC---cEEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEE-----EEECC
Q psy2762          22 DYLGLYLATCSSDH---TVKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLA-----SCSYD   89 (318)
Q Consensus        22 ~~~g~~l~s~s~D~---~v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~la-----s~s~D   89 (318)
                      +|+|.+++-...++   .-.||-+...       ......+..    .++|...+.+++|++  ||++||     +|+.+
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~l~d~~~~a~~~~~~~~~~~~SP--DG~~la~~~~~~G~~~  146 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGE-------SGQEKVLLDPNGWSKDGTVSLGTWAVSW--DGKKVAFAQKPNAADE  146 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEEST-------TSCCEEEECGGGSSSSSCEEEEEEEECT--TSSEEEEEEEETTCSC
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCC-------CCCcEEEEchHHhccCCCEEEEEEEECC--CCCEEEEEECCCCCce
Confidence            48999888776655   3566765311       001122221    124666789999984  589998     55566


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCe--EEEEeeCCCCCcEEEEeecCCe-------------EEEEEeecCCCC-ccee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSV--NSIAWAPKEFGLILACGSSDGT-------------ISFLTYMSDTNS-WESR  153 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~~~lasgs~d~~-------------i~i~~~~~~~~~-~~~~  153 (318)
                      .+|++||+.+++...    ..+...+  ..++|+|+  +..|+.++.|..             |.+|++..+... ..+.
T Consensus       147 ~~i~v~dl~tg~~~~----~~~~~~~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~  220 (695)
T 2bkl_A          147 AVLHVIDVDSGEWSK----VDVIEGGKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH  220 (695)
T ss_dssp             CEEEEEETTTCCBCS----SCCBSCCTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred             EEEEEEECCCCCCcC----CcccCcccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence            799999999876320    1122222  67899999  667888888765             889987433211 0111


Q ss_pred             eecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC----eEEEEEccCCeEEEEEEcccCCCCeeEEEEc
Q psy2762         154 KIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN----LIKIWKQEGDKWIEETKLENHSDWVRDVAWA  229 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s  229 (318)
                      ....|...+..+.|+|+                 +++|+..+.++    .|++|+..++++..   +..+...+....| 
T Consensus       221 ~~~~~~~~~~~~~~SpD-----------------G~~l~~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~~~~~~-  279 (695)
T 2bkl_A          221 ERTGDPTTFLQSDLSRD-----------------GKYLFVYILRGWSENDVYWKRPGEKDFRL---LVKGVGAKYEVHA-  279 (695)
T ss_dssp             CCCCCTTCEEEEEECTT-----------------SCCEEEEEEETTTEEEEEEECTTCSSCEE---EEECSSCCEEEEE-
T ss_pred             ecCCCCEEEEEEEECCC-----------------CCEEEEEEeCCCCceEEEEEcCCCCceEE---eecCCCceEEEEe-
Confidence            12234456678899997                 46677766655    57777655444322   3345555666666 


Q ss_pred             cCCCCCccEEEEEe---CCCeEEEEEcCCCcc--eeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         230 PSWGLSKCMIASCS---QDRKVIIWTSNDYVT--WTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       230 p~~~~~~~~l~s~s---~D~~i~vw~~~~~~~--~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      |+    +.++++..   .++.|.+|++.+...  |. ...... ...|.+++|+ ++.++++...|+..+||..+..|.
T Consensus       280 ~~----g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~-~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~  352 (695)
T 2bkl_A          280 WK----DRFYVLTDEGAPRQRVFEVDPAKPARASWK-EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK  352 (695)
T ss_dssp             ET----TEEEEEECTTCTTCEEEEEBTTBCSGGGCE-EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             cC----CcEEEEECCCCCCCEEEEEeCCCCCccCCe-EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence            43    34555444   258899999866432  22 222222 4568889999 788899999999999998875443

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.40  E-value=5.5e-10  Score=105.86  Aligned_cols=250  Identities=14%  Similarity=0.123  Sum_probs=160.2

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC---CCCCcEEEEEECC-C
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH---PQFGTLLASCSYD-R   90 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~---~~~~~~las~s~D-g   90 (318)
                      .++.+.|+|||++++.++.|+.|.+||+..         .+++.+.++....+ ...++|++   | +|++++.+.+. +
T Consensus       198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~---------~t~~~v~~i~~G~~-P~~ia~s~~~~p-DGk~l~v~n~~~~  266 (567)
T 1qks_A          198 AVHISRLSASGRYLFVIGRDGKVNMIDLWM---------KEPTTVAEIKIGSE-ARSIETSKMEGW-EDKYAIAGAYWPP  266 (567)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTS---------SSCCEEEEEECCSE-EEEEEECCSTTC-TTTEEEEEEEETT
T ss_pred             CccceEECCCCCEEEEEcCCCeEEEEECCC---------CCCcEeEEEecCCC-CceeEEccccCC-CCCEEEEEEccCC
Confidence            466899999999999999999999999841         12356666665443 46888873   3 58888777665 9


Q ss_pred             eEEEEeCCCCcEEEEEEecC--------CCc-CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          91 KVIIWRGDNGNWFKYYEYNN--------HDS-SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~--------h~~-~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      +|.|+|..+.+.+......+        |.. .+..+..+++. ..++++...+|.|.++|+.... ......+ .....
T Consensus       267 ~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~-~~~vv~~~~~g~v~~vd~~~~~-~~~v~~i-~~~~~  343 (567)
T 1qks_A          267 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR-PEFIVNVKETGKILLVDYTDLN-NLKTTEI-SAERF  343 (567)
T ss_dssp             EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEETTCSS-EEEEEEE-ECCSS
T ss_pred             eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC-CEEEEEecCCCeEEEEecCCCc-cceeeee-ecccc
Confidence            99999988776555443321        222 57788888874 3456666777899988874332 1111122 11222


Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCCeEEEEEEc-c--cCCCCeeEEE-EccCCCCCc
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGDKWIEETKL-E--NHSDWVRDVA-WAPSWGLSK  236 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~~~~~~~~~-~--~h~~~V~~v~-~sp~~~~~~  236 (318)
                      ...+.|+|+                 +++ +++...+++|.++|..+++....... .  -|..  +... ++|+   .+
T Consensus       344 ~~d~~~~pd-----------------gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~---~g  401 (567)
T 1qks_A          344 LHDGGLDGS-----------------HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPT---FG  401 (567)
T ss_dssp             EEEEEECTT-----------------SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETT---TE
T ss_pred             ccCceECCC-----------------CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCC---CC
Confidence            345678886                 344 45566788999999998876544433 1  2432  2223 5775   25


Q ss_pred             cEEEEEe-CCCeEEEEEcCCCc----cee-eEEeeecCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEEECCC
Q psy2762         237 CMIASCS-QDRKVIIWTSNDYV----TWT-PFIMNTFDDVVWNVSWSLTGDILTVSCG-------DNSVSLWKENTD  300 (318)
Q Consensus       237 ~~l~s~s-~D~~i~vw~~~~~~----~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~~-------D~~v~iW~~~~~  300 (318)
                      ..+++.. .+++|.+++.....    .|. ...+......-..+..+|++++|.....       .++|.++|+++.
T Consensus       402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~  478 (567)
T 1qks_A          402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM  478 (567)
T ss_dssp             EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred             cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence            5556554 46899999987621    122 2223222222245789999999988663       359999998754

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.39  E-value=1.7e-10  Score=112.46  Aligned_cols=204  Identities=9%  Similarity=-0.022  Sum_probs=130.9

Q ss_pred             ccccCeEEEEecCCCCCcEEEEEECCC-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe-
Q psy2762          64 GHSGPVWQVAWAHPQFGTLLASCSYDR-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT-  137 (318)
Q Consensus        64 ~h~~~V~~v~~~~~~~~~~las~s~Dg-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~-  137 (318)
                      +|...+..++|++  ||++||.++.++     +|++||+.+++.... .+.  ...+..++|+||  +..|+.++.++. 
T Consensus       122 ~~~~~~~~~~~SP--Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~--~~~~~~~~wspD--g~~l~~~~~~~~~  194 (710)
T 2xdw_A          122 DGTVALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLE--RVKFSCMAWTHD--GKGMFYNAYPQQD  194 (710)
T ss_dssp             TSCEEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEE--EECSCCEEECTT--SSEEEEEECCCCS
T ss_pred             CCCEEEEEEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-ccc--CcccceEEEEeC--CCEEEEEEECCcc
Confidence            3555688899984  589998776644     899999998865442 222  223678999999  667777777665 


Q ss_pred             ---------------EEEEEeecCCCCcceeee-c--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC---
Q psy2762         138 ---------------ISFLTYMSDTNSWESRKI-A--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC---  196 (318)
Q Consensus       138 ---------------i~i~~~~~~~~~~~~~~~-~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~---  196 (318)
                                     |.+|++..+.  .....+ .  .|...+..+.|+|+                 +++|+..+.   
T Consensus       195 ~~~~~~~~~~~~~~~v~~~~l~t~~--~~~~~v~~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~  255 (710)
T 2xdw_A          195 GKSDGTETSTNLHQKLYYHVLGTDQ--SEDILCAEFPDEPKWMGGAELSDD-----------------GRYVLLSIREGC  255 (710)
T ss_dssp             SCCSSSCCCCCCCCEEEEEETTSCG--GGCEEEECCTTCTTCEEEEEECTT-----------------SCEEEEEEECSS
T ss_pred             ccccccccccCCCCEEEEEECCCCc--ccceEEeccCCCCeEEEEEEEcCC-----------------CCEEEEEEEccC
Confidence                           8888864332  111111 1  23444567889997                 456666554   


Q ss_pred             --CCeEEEEEccC------CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC----CeEEEEEcCCCcceeeEEe
Q psy2762         197 --DNLIKIWKQEG------DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----RKVIIWTSNDYVTWTPFIM  264 (318)
Q Consensus       197 --d~~i~iwd~~~------~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----~~i~vw~~~~~~~~~~~~~  264 (318)
                        +..|++||+.+      +.. ....+..+...+.. .|+|+    |..|+..+.+    ..|.+|++.+........+
T Consensus       256 ~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~d----g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l  329 (710)
T 2xdw_A          256 DPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTNE----GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL  329 (710)
T ss_dssp             SSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEEE----TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred             CCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEecc----CCEEEEEECCCCCCCEEEEEeCCCCCcccceec
Confidence              67899999875      321 12334456555554 48886    5555555543    3699999876431011223


Q ss_pred             eecCC--cEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         265 NTFDD--VVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       265 ~~~~~--~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ..+..  .+.+++|++++.+++++..|+..+||-.+.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~  366 (710)
T 2xdw_A          330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL  366 (710)
T ss_dssp             ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred             cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence            33333  688899998888999999999777665554

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.37  E-value=2.9e-10  Score=101.89  Aligned_cols=225  Identities=10%  Similarity=0.068  Sum_probs=136.6

Q ss_pred             ceeeeeeecCCCCEEEEeeC--CCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          14 DMIHDAEMDYLGLYLATCSS--DHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .....++|+|+|++|+.+..  +++|.|||++           +++.+.+ +.. .+. ..+.+.+ .....+++.+.||
T Consensus       108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~-----------~~~~~~~~i~~-~~~-~~v~~~p-~~~~~~~~~~~dg  173 (361)
T 2oiz_A          108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVA-----------KGDYVEDVTAA-AGC-WSVIPQP-NRPRSFMTICGDG  173 (361)
T ss_dssp             CCGGGEEECTTSSEEEEEEESSSEEEEEEETT-----------TTEEEEEEGGG-TTE-EEEEECT-TSSSEEEEEETTS
T ss_pred             CCcceEEECCCCCEEEEECCCCCCeEEEEECC-----------CCcEEEEEecC-CCc-ceeEEcC-CCCeeEEEECCCC
Confidence            34667899999999998764  6899999997           3466666 542 221 2244433 3347888999999


Q ss_pred             eEEEEeCCC-CcEEEEEE----ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--c------
Q psy2762          91 KVIIWRGDN-GNWFKYYE----YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--A------  157 (318)
Q Consensus        91 ~v~vWd~~~-~~~~~~~~----~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~------  157 (318)
                      .+.+|+... ++......    +.....++ .+.++|+  +..++..+.++.|.++|+..+... ....+.  .      
T Consensus       174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--g~~~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~  249 (361)
T 2oiz_A          174 GLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD--KDKAHFVSYYGNVYSADFSGDEVK-VDGPWSLLNDEDKAK  249 (361)
T ss_dssp             SEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC--SSEEEEEBTTSEEEEEECSSSSCE-EEEEEESCCHHHHHT
T ss_pred             cEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc--CCEEEEEeCCCeEEEEEecCCCce-ecccccccCcccccc
Confidence            999998764 43321111    11122222 2334565  334455567888988887433210 000000  0      


Q ss_pred             --cccccceeeeCCCCCCCccccccCCCCCCccceEEEec----------CCCeEEEEEccCCeEEEEEEcccCCCCeeE
Q psy2762         158 --HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG----------CDNLIKIWKQEGDKWIEETKLENHSDWVRD  225 (318)
Q Consensus       158 --h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs----------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~  225 (318)
                        ...+...++++|+.                ...+++.+          ..+.|.+||+.+++..  .++..+.  +.+
T Consensus       250 ~~~p~g~~~~a~~~dg----------------~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v--~~i~~~~--p~~  309 (361)
T 2oiz_A          250 NWVPGGYNLVGLHRAS----------------GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV--ARIPGRD--ALS  309 (361)
T ss_dssp             TCEECCSSCEEEETTT----------------TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE--EEEECTT--CCE
T ss_pred             ccccCCeeEEEEecCC----------------CeEEEEEccCCCcccccCCCceEEEEECCCCcEE--EEEecCC--eeE
Confidence              01112235667752                12233322          1358999999988643  4455565  899


Q ss_pred             EEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762         226 VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       226 v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      +.|+|+    |++|++++. ++|.+||..+........+..+....+.++++|||+
T Consensus       310 ia~spd----g~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          310 MTIDQQ----RNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEEETT----TTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             EEECCC----CCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            999996    778888876 999999988752112233334456778999999986

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.37  E-value=2.5e-10  Score=98.88  Aligned_cols=201  Identities=12%  Similarity=0.046  Sum_probs=132.9

Q ss_pred             EEEecccccCeEEEEecCCCCCc-EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT  137 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~  137 (318)
                      +..+..+.....+++|++  +++ +++++..++.|..|+..++  ...  +..+...+.+++++|+  +.++++...++.
T Consensus        20 ~~~l~~~~~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~--~~~--~~~~~~~~~~l~~~~d--g~l~v~~~~~~~   91 (296)
T 3e5z_A           20 ARRLADGFTWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ--LSP--EMHPSHHQNGHCLNKQ--GHLIACSHGLRR   91 (296)
T ss_dssp             CEEEECCCSSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC--EEE--EESSCSSEEEEEECTT--CCEEEEETTTTE
T ss_pred             EEEEecCCccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC--eEE--EECCCCCcceeeECCC--CcEEEEecCCCe
Confidence            344556677788999974  476 7888889999999998876  233  3346677999999998  667777666788


Q ss_pred             EEEEEeecCCCCcceeeec----c-cccccceeeeCCCCCCCccccccCCCCCCccceEEE----ec-------------
Q psy2762         138 ISFLTYMSDTNSWESRKIA----A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS----GG-------------  195 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~----~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las----gs-------------  195 (318)
                      |.+|+...+.    ...+.    . ....++.++++|+                 +..+++    |+             
T Consensus        92 i~~~d~~~g~----~~~~~~~~~~~~~~~~~~i~~d~~-----------------G~l~vtd~~~g~~~~~~~~~~~~~~  150 (296)
T 3e5z_A           92 LERQREPGGE----WESIADSFEGKKLNSPNDVCLAPD-----------------GSLWFSDPTYGIDKPEEGYGGEMEL  150 (296)
T ss_dssp             EEEECSTTCC----EEEEECEETTEECCCCCCEEECTT-----------------SCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred             EEEEcCCCCc----EEEEeeccCCCCCCCCCCEEECCC-----------------CCEEEECCccccccccccccccccC
Confidence            9888763332    11221    1 1124567888876                 455665    33             


Q ss_pred             CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce--eeEEeeecCCcEEE
Q psy2762         196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW--TPFIMNTFDDVVWN  273 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~--~~~~~~~~~~~v~~  273 (318)
                      ..+.|..++.. ++.   ..+..+....+.++|+|+    +..|++.+.++.|.+|++......  ...........+..
T Consensus       151 ~~~~l~~~~~~-g~~---~~~~~~~~~~~gi~~s~d----g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~  222 (296)
T 3e5z_A          151 PGRWVFRLAPD-GTL---SAPIRDRVKPNGLAFLPS----GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG  222 (296)
T ss_dssp             SSCEEEEECTT-SCE---EEEECCCSSEEEEEECTT----SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS
T ss_pred             CCcEEEEECCC-CCE---EEeecCCCCCccEEECCC----CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe
Confidence            13455555554 332   223455566899999996    666787888899999998622111  01112223445678


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ++++++|+++++.  ++.|.+|+.+
T Consensus       223 i~~d~~G~l~v~~--~~~v~~~~~~  245 (296)
T 3e5z_A          223 LRVDAGGLIWASA--GDGVHVLTPD  245 (296)
T ss_dssp             EEEBTTSCEEEEE--TTEEEEECTT
T ss_pred             EEECCCCCEEEEc--CCeEEEECCC
Confidence            9999999977666  7899999854

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.36  E-value=8.9e-11  Score=114.24  Aligned_cols=252  Identities=9%  Similarity=-0.011  Sum_probs=148.8

Q ss_pred             cCCCcceeeeeeecCCCCEEE-----EeeCCCcEEEEEcCCCcCCCCCCCCcceEEE-EecccccCeEEEEecCCCCCcE
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLA-----TCSSDHTVKVFNLDRNLKKDDSHSQKGTLIA-ELKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~-----s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      ..+|...+..++|||||++||     +|+.+.+|+|||+++           ++.+. .+..  .....++|+ +  ++.
T Consensus       124 a~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-----------g~~~~~~~~~--~k~~~~~Ws-D--g~~  187 (693)
T 3iuj_A          124 SPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES-----------KQPLETPLKD--VKFSGISWL-G--NEG  187 (693)
T ss_dssp             STTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT-----------CSEEEEEEEE--EESCCCEEE-T--TTE
T ss_pred             cCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC-----------CCCCccccCC--ceeccEEEe-C--CCE
Confidence            456777899999999999988     344446899999973           23222 2221  112467897 4  788


Q ss_pred             EEEEECCCe-------------EEEEeCCCCcE--EEEEEecC-CCcCeEEEEeeCCCCCcEE-EEeec---CCeEEEEE
Q psy2762          83 LASCSYDRK-------------VIIWRGDNGNW--FKYYEYNN-HDSSVNSIAWAPKEFGLIL-ACGSS---DGTISFLT  142 (318)
Q Consensus        83 las~s~Dg~-------------v~vWd~~~~~~--~~~~~~~~-h~~~v~~v~~~p~~~~~~l-asgs~---d~~i~i~~  142 (318)
                      |+.++.|..             |.+|++.++..  ..++.... |...+..++|+|+  +.++ ++.+.   ...|.+++
T Consensus       188 l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~i~~~d  265 (693)
T 3iuj_A          188 FFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTED--DRFLLISAANSTSGNRLYVKD  265 (693)
T ss_dssp             EEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTT--SCEEEEEEESSSSCCEEEEEE
T ss_pred             EEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCC--CCEEEEEEccCCCCcEEEEEE
Confidence            888888854             99999876532  34444333 4455788999999  4444 33332   24777877


Q ss_pred             eecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC---CeEEEEEccCCeEEEEEEcccC
Q psy2762         143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD---NLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d---~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      ...+..  ....+..+....... |+++.                +..++....+   +.|.++++.++.......+..|
T Consensus       266 ~~~~~~--~~~~l~~~~~~~~~~-~~~~g----------------~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~  326 (693)
T 3iuj_A          266 LSQENA--PLLTVQGDLDADVSL-VDNKG----------------STLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE  326 (693)
T ss_dssp             TTSTTC--CCEEEECSSSSCEEE-EEEET----------------TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred             CCCCCC--ceEEEeCCCCceEEE-EeccC----------------CEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC
Confidence            643321  233444444333332 34331                2333444333   5788888876532111234455


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEe-CCC--eEEEEEcCCCcceeeEEe-eecCCcEEEEEEcCCCCEEEEEeCC----Ce
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCS-QDR--KVIIWTSNDYVTWTPFIM-NTFDDVVWNVSWSLTGDILTVSCGD----NS  291 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s-~D~--~i~vw~~~~~~~~~~~~~-~~~~~~v~~v~~spdg~~l~s~~~D----~~  291 (318)
                      ...+.  .|+|+    +..|+... .|+  .|++|++.+..   ...+ ......+..++++|+++.|+....+    ++
T Consensus       327 ~~~~~--~~s~~----g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~  397 (693)
T 3iuj_A          327 RQQVL--TVHSG----SGYLFAEYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT  397 (693)
T ss_dssp             CSSCE--EEEEE----TTEEEEEEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE
T ss_pred             CCCEE--EEEEE----CCEEEEEEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE
Confidence            55554  88886    55555554 454  68888876432   1222 2234568888999998877766544    67


Q ss_pred             EEEEEECCCCceEEEe
Q psy2762         292 VSLWKENTDGAWQCIT  307 (318)
Q Consensus       292 v~iW~~~~~~~~~~~~  307 (318)
                      +..||+.. ++...+.
T Consensus       398 l~~~d~~~-g~~~~l~  412 (693)
T 3iuj_A          398 LYRFEPKS-GAISLYR  412 (693)
T ss_dssp             EEEECTTT-CCEEEEE
T ss_pred             EEEEECCC-CeEEEEE
Confidence            87777544 4454444

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.34  E-value=3.4e-11  Score=108.39  Aligned_cols=176  Identities=12%  Similarity=0.011  Sum_probs=121.0

Q ss_pred             CeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc---------EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          68 PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN---------WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        68 ~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~---------~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      .++.+++++  ...+|++|+.|+. ++|+...-+         ........ +.. |..|+|  +  +.+++++ .++.|
T Consensus        39 ~~nlLais~--~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d--~~~L~v~-~~~~l  108 (388)
T 1xip_A           39 SLQNLDISN--SKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--H--GDQVLVS-TRNAL  108 (388)
T ss_dssp             CCBCEEEET--TTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--E--TTEEEEE-ESSEE
T ss_pred             cccEEEEcC--CCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--C--CCEEEEE-cCCcE
Confidence            477788874  3678899998854 459753211         11111222 455 999999  5  5677777 88999


Q ss_pred             EEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc
Q psy2762         139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN  218 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~  218 (318)
                      .+||.....   .......|..++..+.+.+.                   .+|+++.||.|.+||+..+....      
T Consensus       109 ~v~dv~sl~---~~~~~~~~~~~v~~i~~~~p-------------------~~av~~~dG~L~v~dl~~~~~~~------  160 (388)
T 1xip_A          109 YSLDLEELS---EFRTVTSFEKPVFQLKNVNN-------------------TLVILNSVNDLSALDLRTKSTKQ------  160 (388)
T ss_dssp             EEEESSSTT---CEEEEEECSSCEEEEEECSS-------------------EEEEEETTSEEEEEETTTCCEEE------
T ss_pred             EEEEchhhh---ccCccceeecceeeEEecCC-------------------CEEEEECCCCEEEEEccCCcccc------
Confidence            999975443   22234456666766665542                   38889999999999998765432      


Q ss_pred             CCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe------e---ecCCcEEEEEEcCCCCEEEEEe
Q psy2762         219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM------N---TFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       219 h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~------~---~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      +...|+|++|||+    |  ++.+..|+++++|+...........+      .   .+...|.+|.|.+++++|++-.
T Consensus       161 ~~~~Vs~v~WSpk----G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~  232 (388)
T 1xip_A          161 LAQNVTSFDVTNS----Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG  232 (388)
T ss_dssp             EEESEEEEEECSS----E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred             ccCCceEEEEcCC----c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence            3456999999996    6  67899999999998765431101122      1   2567899999999999998743

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.33  E-value=3.6e-09  Score=96.38  Aligned_cols=237  Identities=7%  Similarity=-0.045  Sum_probs=152.3

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC--eE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR--KV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg--~v   92 (318)
                      ....++|+++|+++++...++.|++||.+.           +.+...... ..... ++|++  +++.|+.+..++  .|
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~-----------g~~~~~~~~-~~~~~-ia~~~--~g~~l~~~d~~~~~~I  196 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDD-----------NKVTTVHPG-FKGGK-PAVTK--DKQRVYSIGWEGTHTV  196 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTT-----------TEEEEEEET-CCBCB-CEECT--TSSEEEEEBSSTTCEE
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCC-----------CEEEEeecc-CCCCc-eeEec--CCCcEEEEecCCCceE
Confidence            567899999999888888889999999862           333333332 22233 78863  578888888876  78


Q ss_pred             EEEeCCCCcEEEEE-EecC-CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-e--eccccccc--cee
Q psy2762          93 IIWRGDNGNWFKYY-EYNN-HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-K--IAAHTIGC--NAV  165 (318)
Q Consensus        93 ~vWd~~~~~~~~~~-~~~~-h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~--~~~h~~~v--~~~  165 (318)
                      .+++...+...... .+.. ....+.+++++|++ +.+++ +..++.|..|+.....  .... .  ..++....  +.+
T Consensus       197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv-~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~i  272 (409)
T 3hrp_A          197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE-EWLYF-VDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYL  272 (409)
T ss_dssp             EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS-SEEEE-ECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEE
T ss_pred             EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC-CeEEE-EECCCcEEEEECCCCC--EEEEecccccCCCCCCccccE
Confidence            88887654321211 1112 34567889999953 55555 5567888888763222  1111 0  11111111  278


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC---------------CCCeeEEEEcc
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH---------------SDWVRDVAWAP  230 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h---------------~~~V~~v~~sp  230 (318)
                      +|+|+.                +..+++-..++.|+.|+.+.. ...   +.++               -.....++++|
T Consensus       273 a~~p~~----------------g~lyv~d~~~~~I~~~~~~g~-~~~---~~g~~~~~g~~dg~~~~~~~~~P~gia~d~  332 (409)
T 3hrp_A          273 IYYFVD----------------SNFYMSDQNLSSVYKITPDGE-CEW---FCGSATQKTVQDGLREEALFAQPNGMTVDE  332 (409)
T ss_dssp             EEETTT----------------TEEEEEETTTTEEEEECTTCC-EEE---EEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred             EEeCCC----------------CEEEEEeCCCCEEEEEecCCC-EEE---EEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence            888842                355677778889999987654 211   1222               13478999999


Q ss_pred             CCCCCccEEEEEe-CCCeEEEEEcCCCcceeeEEeeec---------------CCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         231 SWGLSKCMIASCS-QDRKVIIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       231 ~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~~~~~~~~---------------~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      +    |.++++-+ .++.|+.|+..+..   ...+.+.               -.....++++|+|+++++-..++.||.
T Consensus       333 d----G~lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~  405 (409)
T 3hrp_A          333 D----GNFYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK  405 (409)
T ss_dssp             T----CCEEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred             C----CCEEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence            6    67777777 88999999954432   1222222               135889999999988888788888887


Q ss_pred             EEE
Q psy2762         295 WKE  297 (318)
Q Consensus       295 W~~  297 (318)
                      +.+
T Consensus       406 i~~  408 (409)
T 3hrp_A          406 YAV  408 (409)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            765

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.31  E-value=1.5e-08  Score=87.89  Aligned_cols=235  Identities=11%  Similarity=0.064  Sum_probs=147.5

Q ss_pred             CCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          10 TGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+-.--....|+++ +.++++...++.|..||....           .. ..+ .+...+.++++.+  +|+++++ . 
T Consensus         9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~-----------~~-~~~-~~~~~~~~i~~~~--dG~l~v~-~-   71 (297)
T 3g4e_A            9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK-----------QV-QRV-TMDAPVSSVALRQ--SGGYVAT-I-   71 (297)
T ss_dssp             CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC-----------CE-EEE-ECSSCEEEEEEBT--TSSEEEE-E-
T ss_pred             ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC-----------cE-EEE-eCCCceEEEEECC--CCCEEEE-E-
Confidence            334446678889985 556777778899999998632           22 222 2456789999964  4775554 3 


Q ss_pred             CCeEEEEeCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecC---------CeEEEEEeecCCCCcceeeecc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSD---------GTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d---------~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      ++.|.+||..+++.........  ....++.+++.|+  +.++++...+         ....+|.+....   ....+..
T Consensus        72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~~~~~  146 (297)
T 3g4e_A           72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDH---HVKKYFD  146 (297)
T ss_dssp             TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTS---CEEEEEE
T ss_pred             CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCC---CEEEEee
Confidence            6789999988776444333221  2245789999998  5555543221         334666664332   1222233


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc--cCCeEE---EEEEcccCCCCeeEEEEccCC
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ--EGDKWI---EETKLENHSDWVRDVAWAPSW  232 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~--~~~~~~---~~~~~~~h~~~V~~v~~sp~~  232 (318)
                      +....+.++|+|+.                ...+++.+.++.|.+|++  .++...   ....+..+......+++.++ 
T Consensus       147 ~~~~pngi~~spdg----------------~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~-  209 (297)
T 3g4e_A          147 QVDISNGLDWSLDH----------------KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE-  209 (297)
T ss_dssp             EESBEEEEEECTTS----------------CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-
T ss_pred             ccccccceEEcCCC----------------CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-
Confidence            33345678999873                123466677889999987  344322   12233344456788999986 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc-CCCCEEEEEeC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSCG  288 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s-pdg~~l~s~~~  288 (318)
                         |.+.++...++.|.+|+..+...  ...+......+.+++|. ||++.|..++.
T Consensus       210 ---G~lwva~~~~~~v~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          210 ---GKLWVACYNGGRVIRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             ---SCEEEEEETTTEEEEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             ---CCEEEEEcCCCEEEEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence               77788877888999999874331  22333344678999998 89887665543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.30  E-value=2.4e-10  Score=98.59  Aligned_cols=186  Identities=17%  Similarity=0.122  Sum_probs=128.0

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC-cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD-SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      +++|++++.|+.|.+||.++++.  .+++..+. ..+.++++.|+  +.+++  +.++.|..+|. .++.   +..+..+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~~---~W~~~~~   74 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEI--VWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGRE---LWNIAAP   74 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEE--EEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSCE---EEEEECC
T ss_pred             CcEEEeeCCCCEEEEEECCCCeE--EEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCCE---EEEEcCC
Confidence            78999999999999999988874  45555554 46889999998  66777  34677888775 3332   2233322


Q ss_pred             -ccccceeeeCCCCCCCccccccCCCCCCccceEEEecC-CCeEEEEEccCCeEEEEEEcc----cCCCCeeEEEEccCC
Q psy2762         159 -TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC-DNLIKIWKQEGDKWIEETKLE----NHSDWVRDVAWAPSW  232 (318)
Q Consensus       159 -~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~-d~~i~iwd~~~~~~~~~~~~~----~h~~~V~~v~~sp~~  232 (318)
                       ...+..+.+.|+                 ++.+++.+. ++.|..+|.+. +......+.    ++....+.+++.++ 
T Consensus        75 ~~~~~~~~~~~~d-----------------G~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~-  135 (276)
T 3no2_A           75 AGCEMQTARILPD-----------------GNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKK-  135 (276)
T ss_dssp             TTCEEEEEEECTT-----------------SCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTT-
T ss_pred             CCccccccEECCC-----------------CCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCC-
Confidence             234556667775                 467777776 77787787644 333333322    22234566777775 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                         |.+|++...++.|..||.+....|+.    .....+.++.+.|+|+.|++++.++.|..+|..++.
T Consensus       136 ---G~~lv~~~~~~~v~~~d~~G~~~w~~----~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~  197 (276)
T 3no2_A          136 ---GNYLVPLFATSEVREIAPNGQLLNSV----KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR  197 (276)
T ss_dssp             ---SCEEEEETTTTEEEEECTTSCEEEEE----ECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred             ---CCEEEEecCCCEEEEECCCCCEEEEE----ECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence               88999999999999999875433322    223456788999999999988888889888866554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.30  E-value=5.5e-11  Score=107.00  Aligned_cols=183  Identities=12%  Similarity=0.033  Sum_probs=125.5

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .++.+++++...++++|+.| .++||++++-..........-..... ..+.. |+.++|    +++.|+.+ .++.|++
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f----d~~~L~v~-~~~~l~v  110 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF----HGDQVLVS-TRNALYS  110 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE----ETTEEEEE-ESSEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE----CCCEEEEE-cCCcEEE
Confidence            68899999999999999987 56679875211000000000011111 23566 999999    37889888 8899999


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL  174 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~  174 (318)
                      ||+.+-....  ....|...+.++.+.+.  .  +++++.||.|.+|++....    ..   .+...|.+++|+|+    
T Consensus       111 ~dv~sl~~~~--~~~~~~~~v~~i~~~~p--~--~av~~~dG~L~v~dl~~~~----~~---~~~~~Vs~v~WSpk----  173 (388)
T 1xip_A          111 LDLEELSEFR--TVTSFEKPVFQLKNVNN--T--LVILNSVNDLSALDLRTKS----TK---QLAQNVTSFDVTNS----  173 (388)
T ss_dssp             EESSSTTCEE--EEEECSSCEEEEEECSS--E--EEEEETTSEEEEEETTTCC----EE---EEEESEEEEEECSS----
T ss_pred             EEchhhhccC--ccceeecceeeEEecCC--C--EEEEECCCCEEEEEccCCc----cc---cccCCceEEEEcCC----
Confidence            9987543222  23456677888877764  2  7788999999999974332    11   24567999999996    


Q ss_pred             ccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc------c---cCCCCeeEEEEccCCCCCccEEEE
Q psy2762         175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL------E---NHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       175 ~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~------~---~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                                   +  ++.|..||++++|+....+.....++      .   +|...|.+|+|.++    +.+|++
T Consensus       174 -------------G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~----~~flv~  230 (388)
T 1xip_A          174 -------------Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP----QDFLAV  230 (388)
T ss_dssp             -------------E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS----SEEEEE
T ss_pred             -------------c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC----CeEEEE
Confidence                         4  68899999999999887653112233      2   47788999999985    566665

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.29  E-value=1.1e-08  Score=96.89  Aligned_cols=246  Identities=14%  Similarity=0.061  Sum_probs=154.5

Q ss_pred             ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCC--
Q psy2762          21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGD--   98 (318)
Q Consensus        21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~--   98 (318)
                      .+|.+.++++...+++|.|+|..           +++++.++... ..+..+.|++  +|++|++++.|+.|.+||+.  
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~-----------t~~v~~~i~~g-~~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~  228 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGS-----------TYEIKTVLDTG-YAVHISRLSA--SGRYLFVIGRDGKVNMIDLWMK  228 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETT-----------TCCEEEEEECS-SCEEEEEECT--TSCEEEEEETTSEEEEEETTSS
T ss_pred             cCCCceEEEEeCCCCeEEEEECC-----------CCeEEEEEeCC-CCccceEECC--CCCEEEEEcCCCeEEEEECCCC
Confidence            34556778888899999999986           34667776533 3466889974  59999999999999999985  


Q ss_pred             CCcEEEEEEecCCCcCeEEEEee----CCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc----------ccc-ccc
Q psy2762          99 NGNWFKYYEYNNHDSSVNSIAWA----PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA----------HTI-GCN  163 (318)
Q Consensus        99 ~~~~~~~~~~~~h~~~v~~v~~~----p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~----------h~~-~v~  163 (318)
                      +.+.+.  ++.. ......++|+    |++ ..++++...+++|.++|.....   .+..+..          |.. .+.
T Consensus       229 t~~~v~--~i~~-G~~P~~ia~s~~~~pDG-k~l~v~n~~~~~v~ViD~~t~~---~~~~i~~~~~~~~~~~~~p~~rva  301 (567)
T 1qks_A          229 EPTTVA--EIKI-GSEARSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLE---PKKIQSTRGMTYDEQEYHPEPRVA  301 (567)
T ss_dssp             SCCEEE--EEEC-CSEEEEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCC---EEEEEECCEECTTTCCEESCCCEE
T ss_pred             CCcEeE--EEec-CCCCceeEEccccCCCC-CEEEEEEccCCeEEEEECCCCc---EEEEEeccccccccccccCCCceE
Confidence            554333  3433 2346789999    573 2444555556899999853322   1222221          111 234


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-  242 (318)
                      .+..+++.                ..+++...++|.|.++|....+......+ .......++.|+|+    +++|.++ 
T Consensus       302 ~i~~s~~~----------------~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pd----gr~~~va~  360 (567)
T 1qks_A          302 AILASHYR----------------PEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGS----HRYFITAA  360 (567)
T ss_dssp             EEEECSSS----------------SEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTT----SCEEEEEE
T ss_pred             EEEEcCCC----------------CEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCC----CCEEEEEe
Confidence            44455431                24567778889999999765432222232 23345778999996    6665544 


Q ss_pred             eCCCeEEEEEcCCCcceeeEEee-----ecCCcEEEEEEcCCCCEE-EEEe-CCCeEEEEEECCCCc----eEEEeeecc
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMN-----TFDDVVWNVSWSLTGDIL-TVSC-GDNSVSLWKENTDGA----WQCITEMGK  311 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~-----~~~~~v~~v~~spdg~~l-~s~~-~D~~v~iW~~~~~~~----~~~~~~~~~  311 (318)
                      ..+.+|.++|..+...  .....     .|...-..+ ++|++..+ +++. .+++|.+++.+..++    |+.++.+..
T Consensus       361 ~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~  437 (567)
T 1qks_A          361 NARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPA  437 (567)
T ss_dssp             GGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred             CCCCeEEEEECCCCcE--EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEec
Confidence            4688999999987531  11121     232211122 68885444 4443 578999999887443    877777654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.26  E-value=3.6e-08  Score=84.68  Aligned_cols=237  Identities=9%  Similarity=0.048  Sum_probs=150.4

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...+..++++++|+++++...++.|.+||.. .          ......+......+.++++.+  ++.++++...++.|
T Consensus        61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g----------~~~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i  127 (300)
T 2qc5_A           61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G----------GFTEYPLPQPDSGPYGITEGL--NGDIWFTQLNGDRI  127 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTT-S----------CEEEEECSSTTCCEEEEEECS--TTCEEEEETTTTEE
T ss_pred             CCcceeEEECCCCCEEEEecCCCeEEEECCC-C----------CeEEecCCCCCCCCccceECC--CCCEEEEccCCCeE
Confidence            4578889999999988887778889999875 2          111122333446688898863  57777776668899


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      ..+|.. ++.. .+.+......+.++++.|+  +.+.++...++.|..++. .+.  ........+...+..+.+.++  
T Consensus       128 ~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~--g~l~v~~~~~~~i~~~~~-~g~--~~~~~~~~~~~~~~~i~~d~~--  198 (300)
T 2qc5_A          128 GKLTAD-GTIY-EYDLPNKGSYPAFITLGSD--NALWFTENQNNSIGRITN-TGK--LEEYPLPTNAAAPVGITSGND--  198 (300)
T ss_dssp             EEECTT-SCEE-EEECSSTTCCEEEEEECTT--SSEEEEETTTTEEEEECT-TCC--EEEEECSSTTCCEEEEEECTT--
T ss_pred             EEECCC-CCEE-EccCCCCCCCceeEEECCC--CCEEEEecCCCeEEEECC-CCc--EEEeeCCCCCCCcceEEECCC--
Confidence            999987 5432 3334434567889999987  556666665777777764 221  111111122234556666664  


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                     +..+++....+.|.+|+. .++.. ...+..+...+.++.++++    +.++++...++.|..|+
T Consensus       199 ---------------g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~----g~l~v~~~~~~~i~~~~  257 (300)
T 2qc5_A          199 ---------------GALWFVEIMGNKIGRITT-TGEIS-EYDIPTPNARPHAITAGKN----SEIWFTEWGANQIGRIT  257 (300)
T ss_dssp             ---------------SSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST----TCEEEEETTTTEEEEEC
T ss_pred             ---------------CCEEEEccCCCEEEEEcC-CCcEE-EEECCCCCCCceEEEECCC----CCEEEeccCCCeEEEEC
Confidence                           345555556678999998 44432 2334445566899999986    66666666678999998


Q ss_pred             cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ....  .....+......+.+++++|+|++.++.. . .|..++
T Consensus       258 ~~g~--~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~  297 (300)
T 2qc5_A          258 NDNT--IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN  297 (300)
T ss_dssp             TTSC--EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred             CCCc--EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence            8432  11112222335678999999998776554 3 555444

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.25  E-value=1.9e-08  Score=90.52  Aligned_cols=244  Identities=12%  Similarity=-0.004  Sum_probs=139.3

Q ss_pred             eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-------ccCeEEEEecCCCCC
Q psy2762          18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-------SGPVWQVAWAHPQFG   80 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-------~~~V~~v~~~~~~~~   80 (318)
                      .++|+|||++|+.+.          .+++|.+||...           .+.+.++..-       ...-..+.|++  +|
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-----------~~~~~~i~~~~~~~~~~g~~p~~~~~sp--DG  136 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-----------FLPIADIELPDAPRFDVGPYSWMNANTP--NN  136 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC-----------CcEEEEEECCCccccccCCCccceEECC--CC
Confidence            799999999988875          368899999862           3344443211       12234678864  58


Q ss_pred             cEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee--eec
Q psy2762          81 TLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR--KIA  156 (318)
Q Consensus        81 ~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~--~~~  156 (318)
                      ++|+.+..  +..|.++| .+++.... .+.. .   .++.+.|+. ...+++.+.|+.+.+++. ..+......  ...
T Consensus       137 ~~l~v~n~~~~~~v~viD-~t~~~~~~-~i~~-~---~~~~~~~~~-~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~  208 (373)
T 2mad_H          137 ADLLFFQFAAGPAVGLVV-QGGSSDDQ-LLSS-P---TCYHIHPGA-PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML  208 (373)
T ss_pred             CEEEEEecCCCCeEEEEE-CCCCEEeE-EcCC-C---ceEEEEeCC-CceEEEEcCCCCEEEEEC-CCcEEEEEeccccc
Confidence            99998875  57899999 88764333 0221 1   135566664 345666778898888886 332110000  000


Q ss_pred             cccccc-ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----------CCCeeE
Q psy2762         157 AHTIGC-NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----------SDWVRD  225 (318)
Q Consensus       157 ~h~~~v-~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----------~~~V~~  225 (318)
                      ....++ ....+.++.                +..++. +..+.+.+.|+..+.......++-.          ......
T Consensus       209 ~~~~p~~~~~~~~~~~----------------~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~  271 (373)
T 2mad_H          209 TAAQNLLTQPAQANKS----------------GRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ  271 (373)
T ss_pred             cCCcceeecceeEecC----------------CEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe
Confidence            000010 011122211                122333 3667899998865432111111110          112334


Q ss_pred             EEEccCCCCCccEEEEEeC----------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762         226 VAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS  293 (318)
Q Consensus       226 v~~sp~~~~~~~~l~s~s~----------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~  293 (318)
                      +.++|+    +..+..+..          ++.|.+.|..+...  ...+ ......+.++|+|||+ .|+++. .+++|.
T Consensus       272 ~~~s~d----~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~  344 (373)
T 2mad_H          272 VAYLKS----SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVLH  344 (373)
T ss_pred             EEECCC----CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence            677886    444444332          35799999876431  1222 2344688999999999 777777 589999


Q ss_pred             EEEECCCCceEEE
Q psy2762         294 LWKENTDGAWQCI  306 (318)
Q Consensus       294 iW~~~~~~~~~~~  306 (318)
                      ++|..+....+.+
T Consensus       345 ViD~~t~~vv~~i  357 (373)
T 2mad_H          345 IYDAGAGDQDQST  357 (373)
T ss_pred             EEECCCCCEEeee
Confidence            9998776555443

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.23  E-value=7.4e-08  Score=84.80  Aligned_cols=226  Identities=10%  Similarity=-0.048  Sum_probs=139.0

Q ss_pred             eeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      ....+.|+|+ +.++++...++.|.+||.+.           +. ...+. +...+.++.|++  +++++++. .+ .|.
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~-----------~~-~~~~~-~~~~v~~i~~~~--dg~l~v~~-~~-gl~  112 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLAS-----------GR-KTVHA-LPFMGSALAKIS--DSKQLIAS-DD-GLF  112 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTT-----------TE-EEEEE-CSSCEEEEEEEE--TTEEEEEE-TT-EEE
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCC-----------Cc-EEEEE-CCCcceEEEEeC--CCeEEEEE-CC-CEE
Confidence            4567889997 45666777789999999862           22 22222 346789999974  47766654 44 488


Q ss_pred             EEeCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          94 IWRGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      +||..+++.........  ....++++++.|+  +.++++...+    ....||.+. . .  ....+..+....+.++|
T Consensus       113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~--G~l~v~~~~~~~~~~~~~l~~~~-~-g--~~~~~~~~~~~~~~i~~  186 (326)
T 2ghs_A          113 LRDTATGVLTLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVA-K-G--KVTKLFADISIPNSICF  186 (326)
T ss_dssp             EEETTTCCEEEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEE-T-T--EEEEEEEEESSEEEEEE
T ss_pred             EEECCCCcEEEEeeCCCCCCCCCCCCEEECCC--CCEEEEeCCCcCCCCceEEEEEe-C-C--cEEEeeCCCcccCCeEE
Confidence            99988776433322211  1235889999998  5555543321    234566554 2 1  22223223334567889


Q ss_pred             CCCCCCCccccccCCCCCCccceE-EEecCCCeEEEEEcc--CC-eE---EEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRL-VSGGCDNLIKIWKQE--GD-KW---IEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~l-asgs~d~~i~iwd~~--~~-~~---~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      +|+                 ++.| ++.+.++.|.+|+.+  ++ +.   .....+.........+.+.++    |.+++
T Consensus       187 s~d-----------------g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~----G~lwv  245 (326)
T 2ghs_A          187 SPD-----------------GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE----GHIWN  245 (326)
T ss_dssp             CTT-----------------SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT----SCEEE
T ss_pred             cCC-----------------CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC----CCEEE
Confidence            986                 3333 555667899999975  44 21   112233334455778999885    67777


Q ss_pred             EEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc-CCCCEEEEEe
Q psy2762         241 SCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVSC  287 (318)
Q Consensus       241 s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s-pdg~~l~s~~  287 (318)
                      +...++.|.+|+.....   ...+......+.+++|+ ||++.|+.++
T Consensus       246 a~~~~~~v~~~d~~g~~---~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          246 ARWGEGAVDRYDTDGNH---IARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             EEETTTEEEEECTTCCE---EEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             EEeCCCEEEEECCCCCE---EEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            76667889999884321   22233334569999998 9988775554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.22  E-value=1.2e-08  Score=88.82  Aligned_cols=234  Identities=13%  Similarity=0.039  Sum_probs=140.8

Q ss_pred             cceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      -.......|+|+|+ ++++...++.|..|+.. .           . ...+..+...+..+.+.+  +|+++++...++.
T Consensus        44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-----------~-~~~~~~~~~~~~gl~~d~--dG~l~v~~~~~~~  108 (305)
T 3dr2_A           44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-----------T-VDVLLDATAFTNGNAVDA--QQRLVHCEHGRRA  108 (305)
T ss_dssp             CSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-----------C-EEEEEESCSCEEEEEECT--TSCEEEEETTTTE
T ss_pred             CcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-----------C-EEEEeCCCCccceeeECC--CCCEEEEECCCCE
Confidence            44667899999998 67777788999999864 1           2 234555667789999863  5786666555688


Q ss_pred             EEEEeCCCCcEEEEEE-ecCC-CcCeEEEEeeCCCCCcEEEE----eecC-----------CeEEEEEeecCCCCcceee
Q psy2762          92 VIIWRGDNGNWFKYYE-YNNH-DSSVNSIAWAPKEFGLILAC----GSSD-----------GTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~-~~~h-~~~v~~v~~~p~~~~~~las----gs~d-----------~~i~i~~~~~~~~~~~~~~  154 (318)
                      |.+|+.. ++...... ..+. ...++.+++.|+  +.+.++    |..+           +.-.||.+......  ...
T Consensus       109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~d--G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~--~~~  183 (305)
T 3dr2_A          109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARD--GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP--LQR  183 (305)
T ss_dssp             EEEECTT-SCEEEEECEETTEECSCCCCEEECTT--SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC--CEE
T ss_pred             EEEECCC-CCEEEEEeccCCCccCCCCCEEECCC--CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc--EEE
Confidence            9999976 44322211 1111 134678999998  666665    3321           12334444322221  122


Q ss_pred             ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC------CeEEEEEccCCeEEEEEEc-ccCCCCeeEEE
Q psy2762         155 IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD------NLIKIWKQEGDKWIEETKL-ENHSDWVRDVA  227 (318)
Q Consensus       155 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d------~~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~  227 (318)
                      +. .....+.++|+|+                 ++.|+.+...      +.|++|++..+.......+ .........++
T Consensus       184 ~~-~~~~p~gl~~spd-----------------g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~  245 (305)
T 3dr2_A          184 MA-DLDHPNGLAFSPD-----------------EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC  245 (305)
T ss_dssp             EE-EESSEEEEEECTT-----------------SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE
T ss_pred             Ee-cCCCCcceEEcCC-----------------CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE
Confidence            22 2334567889987                 3445555443      6899999876532111111 11233456788


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSL  294 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~i  294 (318)
                      ++++    |.+.++. .++ |.+|+.....   ...+. ....+.+++|+|+++.|..++.++..++
T Consensus       246 ~d~~----G~lwv~~-~~g-v~~~~~~g~~---~~~~~-~~~~~~~~~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          246 VDRG----GWLWSSS-GTG-VCVFDSDGQL---LGHIP-TPGTASNCTFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             ECTT----SCEEECC-SSE-EEEECTTSCE---EEEEE-CSSCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred             ECCC----CCEEEec-CCc-EEEECCCCCE---EEEEE-CCCceeEEEEeCCCCEEEEEcCCeEEEE
Confidence            8886    6655444 454 9999885432   22222 2235889999999999888887654433

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.21  E-value=2.9e-09  Score=94.52  Aligned_cols=241  Identities=10%  Similarity=0.011  Sum_probs=143.4

Q ss_pred             ceeeeeeecCCCCEEEEee--CCCcEEEEEcCCCcCCCCCCCCcceEE------EEecccccCeEEEEecCCCCCcEEEE
Q psy2762          14 DMIHDAEMDYLGLYLATCS--SDHTVKVFNLDRNLKKDDSHSQKGTLI------AELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s--~D~~v~vwd~~~~~~~~~~~~~~~~~~------~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ..+..++++|+|+++++..  .++.++||.+..           +++.      ....+|...+.++++.+  +++++++
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-----------g~~~~~p~~~~~~~~~~~~p~gv~~d~--~g~L~v~   83 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-----------DGLIPFPPQSGNAIITFDTVLGIKSDG--NGIVWML   83 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-----------TEEEESCCCCSSCCCCCSCEEEEEECS--SSEEEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-----------CCeecCCCcccCcccceeEeeEEEEcC--CCcEEEE
Confidence            5788999999999999864  234467776641           1211      01124567899999963  4665555


Q ss_pred             EEC-----CCeEEEEeCCCCcEEEEEEecC----CCcCeEEEEeeCCCCCcEEEEee---cCCeEEEEEeecCCCCccee
Q psy2762          86 CSY-----DRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACGS---SDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        86 ~s~-----Dg~v~vWd~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~~lasgs---~d~~i~i~~~~~~~~~~~~~  153 (318)
                      -..     +..|.+||+.+++....+.+..    +...++.+++.|+. +.++++..   .++.|.+|+...+.   ..+
T Consensus        84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~---~~r  159 (343)
T 2qe8_A           84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGL---AAR  159 (343)
T ss_dssp             ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCC---EEE
T ss_pred             cCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCC---EEE
Confidence            433     5799999998877555555431    23456899999863 45666655   67889999864332   111


Q ss_pred             eecccc-----------------------------cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-eEEEE
Q psy2762         154 KIAAHT-----------------------------IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-LIKIW  203 (318)
Q Consensus       154 ~~~~h~-----------------------------~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-~i~iw  203 (318)
                      .+.+|.                             ..++.++|+|+                 ++.|+.+..++ .|..+
T Consensus       160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d-----------------g~~ly~~~~~~~~l~~~  222 (343)
T 2qe8_A          160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE-----------------NEWLYLSPMHSTSMYRI  222 (343)
T ss_dssp             ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT-----------------SCEEEEEESSCSEEEEE
T ss_pred             EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC-----------------CCEEEEEeCCCCeEEEE
Confidence            111111                             12344555554                 34555555544 44444


Q ss_pred             Ecc---CCeE-----EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEE
Q psy2762         204 KQE---GDKW-----IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWN  273 (318)
Q Consensus       204 d~~---~~~~-----~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~  273 (318)
                      +..   .+..     .......++......++++++    |.++++...++.|.+|+..+..   ...+.  .....+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~----G~l~va~~~~~~V~~~d~~~G~---~~~~~~~~~~~~p~~  295 (343)
T 2qe8_A          223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD----HNIYVGDLAHSAIGVITSADRA---YKLLVTDEKLSWTDS  295 (343)
T ss_dssp             EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT----CCEEEEEGGGTEEEEEETTTTE---EEEEEECGGGSCEEE
T ss_pred             EHHHhcCCCCChhhhhcceEecccCCCCceEEECCC----CCEEEEccCCCeEEEEECCCCC---EEEEEECCceecCCe
Confidence            422   1000     000011133334667899986    7888888889999999983322   11221  12356889


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEE
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      ++|.|+|+++++.+..+.+.+|
T Consensus       296 va~~~~g~l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          296 FNFGSDGYLYFDCNQLHHSAPL  317 (343)
T ss_dssp             EEECTTSCEEEEECCGGGSGGG
T ss_pred             eEECCCCcEEEEeCcccccccc
Confidence            9999999988888765544333

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.19  E-value=1.3e-08  Score=89.80  Aligned_cols=217  Identities=11%  Similarity=-0.035  Sum_probs=136.0

Q ss_pred             CCCcEEEEEcCCCcCCCCCCCCcceEEEEec------ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEE
Q psy2762          33 SDHTVKVFNLDRNLKKDDSHSQKGTLIAELK------GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYY  106 (318)
Q Consensus        33 ~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~------~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~  106 (318)
                      .+++|.++|.+.           ++....+.      ........+.+.   .++++++...+++|.+||..+++.+...
T Consensus        15 ~~~~l~~~d~~t-----------~~~~~~i~~~~n~~~lg~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~~~~~i   80 (328)
T 3dsm_A           15 SNATLSYYDPAT-----------CEVENEVFYRANGFKLGDVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFKEVGRI   80 (328)
T ss_dssp             CCBEEEEEETTT-----------TEEECSHHHHHHSSCCBSCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred             CCceEEEEECCC-----------CEEhhhhHhhhcCcccCccceEEEEE---CCEEEEEEcCCCEEEEEECcccEEEEEc
Confidence            489999999863           34433321      112345677763   2566677777899999999988754433


Q ss_pred             EecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc-----cccceeeeCCCCCCCccccccC
Q psy2762         107 EYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT-----IGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       107 ~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                        . .......++++|+  +.++++...++.|.++|.....   ....+....     .....+++ .+           
T Consensus        81 --~-~~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~---~~~~i~~g~~~~~~~~p~~i~~-~~-----------  140 (328)
T 3dsm_A           81 --T-GFTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYE---ITGYIECPDMDMESGSTEQMVQ-YG-----------  140 (328)
T ss_dssp             --E-CCSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTE---EEEEEECTTCCTTTCBCCCEEE-ET-----------
T ss_pred             --C-CCCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCe---EEEEEEcCCccccCCCcceEEE-EC-----------
Confidence              3 2456889999887  5666665578999999864322   111222111     02223333 11           


Q ss_pred             CCCCCccceEEEec-CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC----------CeEEE
Q psy2762         182 SKLGGVAKRLVSGG-CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD----------RKVII  250 (318)
Q Consensus       182 ~~~~~~~~~lasgs-~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D----------~~i~v  250 (318)
                            +..+++.. .++.|.++|..+++.......   ......+.++|+    |.+++++..+          +.|.+
T Consensus       141 ------~~lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~d----G~l~v~~~~~~~~~~~~~~~~~v~~  207 (328)
T 3dsm_A          141 ------KYVYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKY----NKMWTITDGGYEGSPYGYEAPSLYR  207 (328)
T ss_dssp             ------TEEEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTT----SEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred             ------CEEEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCC----CCEEEEECCCccCCccccCCceEEE
Confidence                  23344443 488999999988865443332   123568899996    6777766554          78999


Q ss_pred             EEcCCCcceeeEEee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         251 WTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       251 w~~~~~~~~~~~~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +|..+...  ..... ........++|+||++.|..+..  +|.+||..++
T Consensus       208 id~~t~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~  254 (328)
T 3dsm_A          208 IDAETFTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD  254 (328)
T ss_dssp             EETTTTEE--EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred             EECCCCeE--EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence            99876431  11121 11236789999999999887755  7888886553

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.19  E-value=3.3e-09  Score=103.90  Aligned_cols=242  Identities=13%  Similarity=0.063  Sum_probs=141.8

Q ss_pred             cCCCCEEEEeeCCCc---EEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEEEEECC-----
Q psy2762          22 DYLGLYLATCSSDHT---VKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLASCSYD-----   89 (318)
Q Consensus        22 ~~~g~~l~s~s~D~~---v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~las~s~D-----   89 (318)
                      +|+|++++-...++.   -.||.+.....    .......+..    -++|...+..++|++  ||++||.++.+     
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~lld~~~l~~~~~~~~~~~~~SP--DG~~la~~~~~~G~e~  188 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAP----VGTKGRVLLDPNTWAKDGATALDAWAASD--DGRLLAYSVQDGGSDW  188 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSC----TTCCCEEEECGGGCC----EEEEEEEECT--TSSEEEEEEEETTCSE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCcc----CCCCCEEEECHHHhccCCCEEEEeEEECC--CCCEEEEEEcCCCCce
Confidence            489999887665554   67776641100    0001122111    123445688899984  58998887664     


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe--------------EEEEEeecCCCCcceeee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT--------------ISFLTYMSDTNSWESRKI  155 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~--------------i~i~~~~~~~~~~~~~~~  155 (318)
                      .+|++||+.+++.... .+  +...+..++|+|+ .  .|+.++.++.              |.+|+...+.  .....+
T Consensus       189 ~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~--~~~~lv  260 (741)
T 1yr2_A          189 RTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ--SADQPV  260 (741)
T ss_dssp             EEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-S--EEEEEECCCC--------CCCCCEEEEEETTSCG--GGCEEE
T ss_pred             EEEEEEECCCCCCCCc-cC--CCceeccEEEECC-C--EEEEEEecCcccccccccCCCCCEEEEEECCCCc--hhCEEE
Confidence            4699999998875332 11  1222357899998 3  3444454443              6677653221  111112


Q ss_pred             c---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEE
Q psy2762         156 A---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVA  227 (318)
Q Consensus       156 ~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~  227 (318)
                      .   .+...+..+.|+|+                 +++|+..+.+     ..|++||+.++.......+..+...+....
T Consensus       261 ~~~~~~~~~~~~~~~SpD-----------------G~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~  323 (741)
T 1yr2_A          261 FATPELPKRGHGASVSSD-----------------GRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV  323 (741)
T ss_dssp             ECCTTCTTCEEEEEECTT-----------------SCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE
T ss_pred             eccCCCCeEEEEEEECCC-----------------CCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE
Confidence            1   23234667889997                 4667766644     389999988762110123334444454443


Q ss_pred             EccCCCCCccEEEEEeCC----CeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         228 WAPSWGLSKCMIASCSQD----RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D----~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                       +|+    +..|+..+.+    ..|.+|++.+.. .+. .....+...+.+++|+ ++.++++...|+..+||..+..|
T Consensus       324 -~~d----g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g  395 (741)
T 1yr2_A          324 -DGV----GDQLWFVSGDGAPLKKIVRVDLSGSTPRFD-TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG  395 (741)
T ss_dssp             -EEE----TTEEEEEECTTCTTCEEEEEECSSSSCEEE-EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred             -ecc----CCEEEEEECCCCCCCEEEEEeCCCCccccE-EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence             465    6667766654    459999987631 222 2334445567788888 67788888999999999887544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.18  E-value=3e-09  Score=90.37  Aligned_cols=199  Identities=10%  Similarity=-0.042  Sum_probs=131.4

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +...+.+++++++|+++++.. ++.|.+||.+..            ....+. .....+.++++.+  +++++++...++
T Consensus        65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~------------~~~~~~~~~~~~p~~i~~~~--~g~l~v~~~~~~  129 (270)
T 1rwi_B           65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN------------NQTVLPFDGLNYPEGLAVDT--QGAVYVADRGNN  129 (270)
T ss_dssp             SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS------------CCEECCCCSCSSEEEEEECT--TCCEEEEEGGGT
T ss_pred             CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc------------eEeeeecCCcCCCcceEECC--CCCEEEEECCCC
Confidence            345678899999999777766 889999987522            112222 2235688999863  578777777789


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      .|.+|+..+.....  ........+.++++.|+  +.++++...++.|.+|+.....   .......+...+..++++|+
T Consensus       130 ~i~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~  202 (270)
T 1rwi_B          130 RVVKLAAGSKTQTV--LPFTGLNDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEA  202 (270)
T ss_dssp             EEEEECTTCCSCEE--CCCCSCCSCCCEEECTT--CCEEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTT
T ss_pred             EEEEEECCCceeEe--eccccCCCceeEEEeCC--CCEEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCC
Confidence            99999765443211  11222345788999997  5577776677888888753221   11111122234566777775


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +..+++...++.|++|+..+....  .....+...+.+++++|+    |.++++.+.++.|++
T Consensus       203 -----------------g~l~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~----g~l~v~~~~~~~v~~  259 (270)
T 1rwi_B          203 -----------------GTVYVTEHNTNQVVKLLAGSTTST--VLPFTGLNTPLAVAVDSD----RTVYVADRGNDRVVK  259 (270)
T ss_dssp             -----------------CCEEEEETTTSCEEEECTTCSCCE--ECCCCSCSCEEEEEECTT----CCEEEEEGGGTEEEE
T ss_pred             -----------------CCEEEEECCCCcEEEEcCCCCcce--eeccCCCCCceeEEECCC----CCEEEEECCCCEEEE
Confidence                             355666677889999998765321  112233356899999996    678888889999999


Q ss_pred             EEcCC
Q psy2762         251 WTSND  255 (318)
Q Consensus       251 w~~~~  255 (318)
                      ++...
T Consensus       260 ~~~~~  264 (270)
T 1rwi_B          260 LTSLE  264 (270)
T ss_dssp             ECCCG
T ss_pred             EcCCC
Confidence            98765

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.14  E-value=3.4e-08  Score=88.59  Aligned_cols=247  Identities=11%  Similarity=0.090  Sum_probs=143.0

Q ss_pred             eeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-------cCeEEEEecCCCCCc
Q psy2762          19 AEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-------GPVWQVAWAHPQFGT   81 (318)
Q Consensus        19 ~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-------~~V~~v~~~~~~~~~   81 (318)
                      ++++|||++|+.++          .+++|.+||..           +.+++.++....       ..-..+.|++  ||+
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~-----------t~~v~~~I~v~~g~r~~~g~~P~~~a~sp--DGk  149 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV-----------TLLPTADIELPDAPRFLVGTYPWMTSLTP--DGK  149 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----------TCCEEEEEEETTCCCCCBSCCGGGEEECT--TSS
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----------CCeEEEEEECCCccccccCCCCceEEEcC--CCC
Confidence            99999999887765          36789999986           345566554211       1234578864  589


Q ss_pred             EEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          82 LLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        82 ~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +|+.+..  ++.|.++|..+.+.+....+.+      |..+.|.. ...+++.+.||.+.+.+.....+.  ......+.
T Consensus       150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g------~~~~~P~g-~~~~~~~~~DG~~~~v~~~~~g~v--~~~~~~~~  220 (386)
T 3sjl_D          150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD------CYHIFPTA-PDTFFMHCRDGSLAKVAFGTEGTP--EITHTEVF  220 (386)
T ss_dssp             EEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEE-TTEEEEEETTSCEEEEECCSSSCC--EEEECCCC
T ss_pred             EEEEEEcCCCCeEEEEECCCCcEEEEEECCC------cceeecCC-CceeEEECCCCCEEEEECCCCCeE--EEeeccee
Confidence            8888864  6899999999887555444322      12233432 345667778888877776432111  10000000


Q ss_pred             ----cccc-eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc---------c-CCCCee
Q psy2762         160 ----IGCN-AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE---------N-HSDWVR  224 (318)
Q Consensus       160 ----~~v~-~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~---------~-h~~~V~  224 (318)
                          .++. ..+|.+                ..++ ++-.+.++.|++.|+.++.......+.         + ......
T Consensus       221 ~~~~~~~~~~~~~~~----------------~dG~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q  283 (386)
T 3sjl_D          221 HPEDEFLINHPAYSQ----------------KAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ  283 (386)
T ss_dssp             SCTTSCBCSCCEEET----------------TTTE-EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred             ccccccccccceeEc----------------CCCc-EEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc
Confidence                0000 011111                1133 333556789999998765321111111         0 112233


Q ss_pred             EEEEccCCCCCccEEEEEeC---------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762         225 DVAWAPSWGLSKCMIASCSQ---------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS  293 (318)
Q Consensus       225 ~v~~sp~~~~~~~~l~s~s~---------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~  293 (318)
                      .+.++|+   .+++.++-..         ...|.+.|..+...  ...+ .....+++++++|||+ +|.++. .+++|.
T Consensus       284 ~~a~~~~---~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--~~~i-~vg~~~~~lavs~D~~~~ly~tn~~~~~Vs  357 (386)
T 3sjl_D          284 QVAYHRA---LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLY  357 (386)
T ss_dssp             CEEEETT---TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEE-EEEEEECEEEECSSSSCEEEEEETTTTEEE
T ss_pred             eeeECCC---CCeEEEEeccccccccCCCCCEEEEEECCCCeE--EEEE-ECCCCcceEEECCCCCeEEEEEcCCCCeEE
Confidence            4677886   2334443321         25688888877542  1111 1234789999999997 676665 489999


Q ss_pred             EEEECCCCceEEEeeec
Q psy2762         294 LWKENTDGAWQCITEMG  310 (318)
Q Consensus       294 iW~~~~~~~~~~~~~~~  310 (318)
                      ++|..++...+.+...+
T Consensus       358 ViD~~t~k~~~~i~~~~  374 (386)
T 3sjl_D          358 IHDAESGEELRSVNQLG  374 (386)
T ss_dssp             EEETTTCCEEEEECCCC
T ss_pred             EEECCCCcEEEEecCCC
Confidence            99988876666665544

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.03  E-value=5.7e-07  Score=81.78  Aligned_cols=205  Identities=12%  Similarity=-0.036  Sum_probs=128.8

Q ss_pred             cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEee
Q psy2762          67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYM  144 (318)
Q Consensus        67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~  144 (318)
                      .....++|++  +++++++...++.|++||..++......  .. ..... ++|+|+  +..+..+..++  .|.+++..
T Consensus       131 ~~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~~~~~~--~~-~~~~~-ia~~~~--g~~l~~~d~~~~~~I~~~d~~  202 (409)
T 3hrp_A          131 KYMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNKVTTVH--PG-FKGGK-PAVTKD--KQRVYSIGWEGTHTVYVYMKA  202 (409)
T ss_dssp             CCEEEEEECS--TTEEEEEETTTTEEEEEETTTTEEEEEE--ET-CCBCB-CEECTT--SSEEEEEBSSTTCEEEEEEGG
T ss_pred             CCceEEEEeC--CCCEEEEecCCCcEEEEECCCCEEEEee--cc-CCCCc-eeEecC--CCcEEEEecCCCceEEEEEcC
Confidence            3577899863  5787777777899999999876543322  22 22233 899998  45565666554  66666643


Q ss_pred             cCCCCcceeee---cc-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE--ccc
Q psy2762         145 SDTNSWESRKI---AA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK--LEN  218 (318)
Q Consensus       145 ~~~~~~~~~~~---~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~--~~~  218 (318)
                      ...   ....+   .. ....+..++++|+.                + .|..+..++.|+.||..++.......  ..+
T Consensus       203 ~~~---~~~~~g~~~~~~~~~p~~iav~p~~----------------g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g  262 (409)
T 3hrp_A          203 SGW---APTRIGQLGSTFSGKIGAVALDETE----------------E-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSG  262 (409)
T ss_dssp             GTT---CEEEEEECCTTSCSCCCBCEECTTS----------------S-EEEEECTTCEEEEEETTTCCEEEEEECCCCS
T ss_pred             CCc---eeEEeeeccchhcCCcEEEEEeCCC----------------C-eEEEEECCCcEEEEECCCCCEEEEecccccC
Confidence            221   11122   11 33456778888842                2 34446668899999988765322211  223


Q ss_pred             CCCCe-e-EEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec---------------CCcEEEEEEcCCCC
Q psy2762         219 HSDWV-R-DVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF---------------DDVVWNVSWSLTGD  281 (318)
Q Consensus       219 h~~~V-~-~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~---------------~~~v~~v~~spdg~  281 (318)
                      +...- . .++|+|+   ++.++++-...+.|+.|+.....    ..+.+.               -.....++|+|+|+
T Consensus       263 ~~~~~P~~~ia~~p~---~g~lyv~d~~~~~I~~~~~~g~~----~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~  335 (409)
T 3hrp_A          263 SLGTNPGPYLIYYFV---DSNFYMSDQNLSSVYKITPDGEC----EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN  335 (409)
T ss_dssp             CCCCSSCCEEEEETT---TTEEEEEETTTTEEEEECTTCCE----EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred             CCCCCccccEEEeCC---CCEEEEEeCCCCEEEEEecCCCE----EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence            33222 3 9999995   36777777788999999876531    112121               13478999999999


Q ss_pred             EEEEEe-CCCeEEEEEECCCCceEEEe
Q psy2762         282 ILTVSC-GDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       282 ~l~s~~-~D~~v~iW~~~~~~~~~~~~  307 (318)
                      ++++-. .++.|+.|+.. .|...++.
T Consensus       336 lyvad~~~~~~I~~~~~~-~G~v~~~~  361 (409)
T 3hrp_A          336 FYIVDGFKGYCLRKLDIL-DGYVSTVA  361 (409)
T ss_dssp             EEEEETTTTCEEEEEETT-TTEEEEEE
T ss_pred             EEEEeCCCCCEEEEEECC-CCEEEEEe
Confidence            887777 78899999854 35554443

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.02  E-value=1.3e-07  Score=86.15  Aligned_cols=245  Identities=11%  Similarity=0.081  Sum_probs=141.4

Q ss_pred             eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc-------ccCeEEEEecCCCCC
Q psy2762          18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-------SGPVWQVAWAHPQFG   80 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-------~~~V~~v~~~~~~~~   80 (318)
                      .++++|||++|+.+.          .++.|.++|..           +.+++.++..-       ...-..+.|++  +|
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-----------t~~vv~~I~v~g~~r~~~g~~P~~~~~sp--DG  188 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-----------TFLPIADIELPDAPRFLVGTYQWMNALTP--DN  188 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-----------TCCEEEEEEETTCCCCCBSCCGGGSEECT--TS
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-----------CCcEEEEEECCCccccccCCCcceEEEcC--CC
Confidence            789999999887775          46789999986           34555555321       11234567764  58


Q ss_pred             cEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee---ee
Q psy2762          81 TLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR---KI  155 (318)
Q Consensus        81 ~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~---~~  155 (318)
                      ++|+.+..  +++|.+.|..+.+.+....+.+      +....|+. ...+++.+.||.+.+.+....+  ....   .+
T Consensus       189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~~~~~p~g-~~~~v~~~~dG~~~~V~~~~~~--v~~~~~~~~  259 (426)
T 3c75_H          189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------CYHIFPAS-PTVFYMNCRDGSLARVDFADGE--TKVTNTEVF  259 (426)
T ss_dssp             SEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEE-TTEEEEEETTSSEEEEECCTTC--CEEEECCCC
T ss_pred             CEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------ceeeccCC-CcEEEEEcCCCCEEEEECCCCc--EEEEeeeee
Confidence            88888875  5799999999887555443321      13344543 2445566677777666652111  1100   00


Q ss_pred             ccccccc-ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE--EEccc--------CCCCee
Q psy2762         156 AAHTIGC-NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE--TKLEN--------HSDWVR  224 (318)
Q Consensus       156 ~~h~~~v-~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~--~~~~~--------h~~~V~  224 (318)
                      .....++ ....++|+                 +..++..+..+.|.+.|...+.....  ..+..        ......
T Consensus       260 ~v~~~p~~~~~~~~~d-----------------g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~  322 (426)
T 3c75_H          260 HTEDELLINHPAFSLR-----------------SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ  322 (426)
T ss_dssp             SCTTSCBCSCCEECTT-----------------TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS
T ss_pred             ccCCCceeeEeeecCC-----------------CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce
Confidence            0000111 11233443                 23344445678999999865432111  11100        011122


Q ss_pred             EEEEccCCCCCccEEEEEe---------CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC-EEEEEe-CCCeEE
Q psy2762         225 DVAWAPSWGLSKCMIASCS---------QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD-ILTVSC-GDNSVS  293 (318)
Q Consensus       225 ~v~~sp~~~~~~~~l~s~s---------~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~-~l~s~~-~D~~v~  293 (318)
                      .+.++|+   .++.+++..         .++.|.+.|..+...  ...+. .....+.++|+|||+ .|+++. .+++|.
T Consensus       323 ~va~s~d---g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~-vg~~P~gia~spDg~~~lyv~n~~s~~Vs  396 (426)
T 3c75_H          323 QTAYHRQ---SDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIE-LGHEIDSINVSQDAEPLLYALSAGTQTLH  396 (426)
T ss_dssp             CEEEEGG---GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred             eeEEcCC---CCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEE-CCCCcCeEEEccCCCEEEEEEcCCCCeEE
Confidence            3688996   233444433         135799999887542  22222 223578999999999 888888 599999


Q ss_pred             EEEECCCCceEEEe
Q psy2762         294 LWKENTDGAWQCIT  307 (318)
Q Consensus       294 iW~~~~~~~~~~~~  307 (318)
                      ++|..+....+.+.
T Consensus       397 VID~~t~kvv~tI~  410 (426)
T 3c75_H          397 IYDAATGEELRSVD  410 (426)
T ss_dssp             EEETTTCCEEEEEC
T ss_pred             EEECCCCCEEEEec
Confidence            99988765555543

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.93  E-value=1.6e-06  Score=74.96  Aligned_cols=202  Identities=7%  Similarity=0.056  Sum_probs=122.7

Q ss_pred             ccccCeEEEEecCCCCCcEEEE-------EECCCeEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEee
Q psy2762          64 GHSGPVWQVAWAHPQFGTLLAS-------CSYDRKVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGS  133 (318)
Q Consensus        64 ~h~~~V~~v~~~~~~~~~~las-------~s~Dg~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs  133 (318)
                      ..-....+++|. + ++.++++       +..++.|.+||..+++.... ..   .++...+.++++.|+. +.++++..
T Consensus        15 ~~~~~~~~~~~~-~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-g~l~v~~~   90 (314)
T 1pjx_A           15 EDIPGAEGPVFD-K-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CKPEVNGYGGIPAGCQCDRDA-NQLFVADM   90 (314)
T ss_dssp             CCCTTCEEEEEC-T-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-ECCEETTEECCEEEEEECSSS-SEEEEEET
T ss_pred             ccCCCccCceEC-C-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-EecccCCCCCCCceEEEecCC-CcEEEEEC
Confidence            334456788996 3 5777777       67789999999877764322 21   1244668899999872 34444433


Q ss_pred             cCCeEEEEEeecCCCCcceeee-c----c-cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC----------
Q psy2762         134 SDGTISFLTYMSDTNSWESRKI-A----A-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD----------  197 (318)
Q Consensus       134 ~d~~i~i~~~~~~~~~~~~~~~-~----~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d----------  197 (318)
                       ...|.+|+.. +.    ...+ .    . ....+..++++|+                 +..+++...+          
T Consensus        91 -~~~l~~~d~~-g~----~~~~~~~~~~~~~~~~~~~i~~d~~-----------------g~l~v~~~~~~~~~~~~~~~  147 (314)
T 1pjx_A           91 -RLGLLVVQTD-GT----FEEIAKKDSEGRRMQGCNDCAFDYE-----------------GNLWITAPAGEVAPADYTRS  147 (314)
T ss_dssp             -TTEEEEEETT-SC----EEECCSBCTTSCBCBCCCEEEECTT-----------------SCEEEEECBCBCTTSCCCBT
T ss_pred             -CCCEEEEeCC-CC----EEEEEeccCCCccccCCcCEEECCC-----------------CCEEEEecCccccccccccc
Confidence             4467777753 21    2222 1    1 1124667777775                 3445554444          


Q ss_pred             -----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEc----cCCCCCccE-EEEEeCCCeEEEEEcC-CCcceeeEE---
Q psy2762         198 -----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWA----PSWGLSKCM-IASCSQDRKVIIWTSN-DYVTWTPFI---  263 (318)
Q Consensus       198 -----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s----p~~~~~~~~-l~s~s~D~~i~vw~~~-~~~~~~~~~---  263 (318)
                           +.|..|+.+ ++....   ..+......++|+    |+    +.. +++...++.|.+|+.. .........   
T Consensus       148 ~~~~~~~l~~~~~~-g~~~~~---~~~~~~~~~i~~~~~~d~d----g~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~  219 (314)
T 1pjx_A          148 MQEKFGSIYCFTTD-GQMIQV---DTAFQFPNGIAVRHMNDGR----PYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH  219 (314)
T ss_dssp             TSSSCEEEEEECTT-SCEEEE---EEEESSEEEEEEEECTTSC----EEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE
T ss_pred             ccCCCCeEEEECCC-CCEEEe---ccCCCCcceEEEecccCCC----CCEEEEEECCCCeEEEEECCCCCccccceEEEE
Confidence                 467777765 433221   1233346889999    86    644 4555678999999875 221101111   


Q ss_pred             eeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         264 MNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       264 ~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      +..+. ..+..++++++|+++++...++.|.+|+.+++
T Consensus       220 ~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g  257 (314)
T 1pjx_A          220 IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG  257 (314)
T ss_dssp             CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred             CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCC
Confidence            12222 56789999999999888878899999986543

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.85  E-value=4.6e-06  Score=72.07  Aligned_cols=202  Identities=11%  Similarity=0.054  Sum_probs=121.2

Q ss_pred             cccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762          63 KGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT  142 (318)
Q Consensus        63 ~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~  142 (318)
                      ..+.....+..|.+ .++.++++...++.|..||..++.. ..+.   ....+.+++++|+  +.++++ . +..|.+|+
T Consensus         9 ~~~~~~~Egp~w~~-~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~~~~i~~~~d--G~l~v~-~-~~~l~~~d   79 (297)
T 3g4e_A            9 PENCRCGESPVWEE-VSNSLLFVDIPAKKVCRWDSFTKQV-QRVT---MDAPVSSVALRQS--GGYVAT-I-GTKFCALN   79 (297)
T ss_dssp             CCCCSBEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCE-EEEE---CSSCEEEEEEBTT--SSEEEE-E-TTEEEEEE
T ss_pred             ccCCccccCCeEEC-CCCEEEEEECCCCEEEEEECCCCcE-EEEe---CCCceEEEEECCC--CCEEEE-E-CCeEEEEE
Confidence            34444566788864 3577888888889999999887653 2222   3567999999998  555554 3 55677777


Q ss_pred             eecCCCCcceeeecc-----cccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cC--------CCeEEEEEccC-
Q psy2762         143 YMSDTNSWESRKIAA-----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GC--------DNLIKIWKQEG-  207 (318)
Q Consensus       143 ~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~--------d~~i~iwd~~~-  207 (318)
                      ...+.    ...+..     ....++.+.++|+                 +..+++. +.        ...-+||.+.. 
T Consensus        80 ~~~g~----~~~~~~~~~~~~~~~~~di~~d~d-----------------G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~  138 (297)
T 3g4e_A           80 WKEQS----AVVLATVDNDKKNNRFNDGKVDPA-----------------GRYFAGTMAEETAPAVLERHQGALYSLFPD  138 (297)
T ss_dssp             TTTTE----EEEEEECCTTCSSEEEEEEEECTT-----------------SCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred             CCCCc----EEEEEecCCCCCCCCCCCEEECCC-----------------CCEEEecCCcccccccccCCCcEEEEEECC
Confidence            53221    122211     1123566778876                 3333332 21        12345555432 


Q ss_pred             CeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcC--CCcceeeEEe---eecCCcEEEEEEcCCCC
Q psy2762         208 DKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSN--DYVTWTPFIM---NTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       208 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~--~~~~~~~~~~---~~~~~~v~~v~~spdg~  281 (318)
                      ++...   +..+....+.++|+|+    +. ++++.+.++.|.+|+..  +.........   ......+..++++++|+
T Consensus       139 g~~~~---~~~~~~~pngi~~spd----g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~  211 (297)
T 3g4e_A          139 HHVKK---YFDQVDISNGLDWSLD----HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK  211 (297)
T ss_dssp             SCEEE---EEEEESBEEEEEECTT----SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred             CCEEE---EeeccccccceEEcCC----CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence            22211   1223334689999997    54 45666678899999874  2211111111   12235678999999999


Q ss_pred             EEEEEeCCCeEEEEEECCCC
Q psy2762         282 ILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       282 ~l~s~~~D~~v~iW~~~~~~  301 (318)
                      +.++...++.|.+|+.+++.
T Consensus       212 lwva~~~~~~v~~~d~~tG~  231 (297)
T 3g4e_A          212 LWVACYNGGRVIRLDPVTGK  231 (297)
T ss_dssp             EEEEEETTTEEEEECTTTCC
T ss_pred             EEEEEcCCCEEEEEcCCCce
Confidence            88877778889999865443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.84  E-value=2.5e-07  Score=82.83  Aligned_cols=240  Identities=10%  Similarity=-0.045  Sum_probs=133.2

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-------cCe
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-------GPV   69 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-------~~V   69 (318)
                      ++..|.. +  .+.|+|||++++.+.          .+++|.+||..           +++++.++..+.       ..-
T Consensus        61 ~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-----------T~~vv~~I~v~~~~~~~~g~~P  126 (368)
T 1mda_H           61 HSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-----------TFLPIADIELPDAPRFSVGPRV  126 (368)
T ss_dssp             EEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-----------TCCEEEEEEETTSCSCCBSCCT
T ss_pred             EEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC-----------CCCEEEEEECCCccccccCCCc
Confidence            3445544 3  699999999988876          37899999986           356677765431       224


Q ss_pred             EEEEecCCCCCcEEEEEEC--CCeEEE--EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec
Q psy2762          70 WQVAWAHPQFGTLLASCSY--DRKVII--WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS  145 (318)
Q Consensus        70 ~~v~~~~~~~~~~las~s~--Dg~v~v--Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~  145 (318)
                      ..+.+++  ||++|+.+..  +..|.+  +|..+   .......+   .   +.+.|+. ...+++.+.|+.+.+.++..
T Consensus       127 ~~ia~Sp--DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~---~---~~~~p~g-~~~~~~~~~dg~~~~vd~~~  194 (368)
T 1mda_H          127 HIIGNCA--SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS---C---FHIHPGA-AATHYLGSCPASLAASDLAA  194 (368)
T ss_dssp             TSEEECT--TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS---C---CCCEEEE-TTEEECCCCTTSCEEEECCS
T ss_pred             ceEEEcC--CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC---c---eEEccCC-CeEEEEEcCCCCEEEEECcc
Confidence            5678864  5888988875  467888  98765   22222211   1   2234543 23455666777776666532


Q ss_pred             CCC-Ccceee-----ecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-
Q psy2762         146 DTN-SWESRK-----IAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-  218 (318)
Q Consensus       146 ~~~-~~~~~~-----~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-  218 (318)
                      ... ......     +.....+.   . .++                 +..++-.+. +.|.+.|...+.......+.- 
T Consensus       195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~-----------------~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~  252 (368)
T 1mda_H          195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANY-----------------PGMLVWAVA-SSILQGDIPAAGATMKAAIDGN  252 (368)
T ss_dssp             SCCCCEECCCCSCTTSCBCSCCE---E-ETT-----------------TTEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred             ccccCCeEEEEeeeeeeCCCCcc---c-ccc-----------------CCEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence            000 000000     00000111   1 221                 123444445 889999986432111111110 


Q ss_pred             ------CC---CCeeEEEEccCCCCCccEEEEEe-C-------CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762         219 ------HS---DWVRDVAWAPSWGLSKCMIASCS-Q-------DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       219 ------h~---~~V~~v~~sp~~~~~~~~l~s~s-~-------D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                            +.   .....+.++|+   .+..+++.. .       +..+.++|..+...  ...+. .....+.++|+|||+
T Consensus       253 ~~~~~~~~~~p~g~~~v~~s~d---g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i~-vg~~p~gi~~s~Dg~  326 (368)
T 1mda_H          253 ESGRKADNFRSAGFQMVAKLKN---TDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPIS-NGHDSDAIIAAQDGA  326 (368)
T ss_dssp             CTHHHHTTEEECSSSCEEEETT---TTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECCE-EEEEECEEEECCSSS
T ss_pred             cccccccccccCcceeeEEcCC---CCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEEE-CCCCcceEEECCCCC
Confidence                  10   11122789997   233444433 2       23566999987541  12222 123578999999998


Q ss_pred             E-EEEEe-CCCeEEEEEECCC
Q psy2762         282 I-LTVSC-GDNSVSLWKENTD  300 (318)
Q Consensus       282 ~-l~s~~-~D~~v~iW~~~~~  300 (318)
                      . +++.. .+++|.++|..+.
T Consensus       327 ~l~va~~~~~~~VsVID~~t~  347 (368)
T 1mda_H          327 SDNYANSAGTEVLDIYDAASD  347 (368)
T ss_dssp             CEEEEEETTTTEEEEEESSSC
T ss_pred             EEEEEccCCCCeEEEEECCCC
Confidence            4 55555 5999999998775

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.83  E-value=1.1e-07  Score=92.41  Aligned_cols=201  Identities=11%  Similarity=0.046  Sum_probs=116.5

Q ss_pred             ccccCeEEEEecCCCCCcEEEE-----EECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--
Q psy2762          64 GHSGPVWQVAWAHPQFGTLLAS-----CSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--  136 (318)
Q Consensus        64 ~h~~~V~~v~~~~~~~~~~las-----~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--  136 (318)
                      +|...+..++|++  ||++||-     |+...+|++||+.+++.... .+..  .....++|+ |  +..|+.++.+.  
T Consensus       126 ~~~~~l~~~~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws-D--g~~l~y~~~~~~~  197 (693)
T 3iuj_A          126 DGTTALDQLSFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL-G--NEGFFYSSYDKPD  197 (693)
T ss_dssp             TSCCEEEEEEECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE-T--TTEEEEEESSCCC
T ss_pred             CCcEEEEEEEECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe-C--CCEEEEEEecCcc
Confidence            4555688889974  5888884     33346899999998875432 2221  113567899 8  55566666663  


Q ss_pred             -----------eEEEEEeecCCCCcceeee---cc-cccccceeeeCCCCCCCccccccCCCCCCccceEE-Eec---CC
Q psy2762         137 -----------TISFLTYMSDTNSWESRKI---AA-HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV-SGG---CD  197 (318)
Q Consensus       137 -----------~i~i~~~~~~~~~~~~~~~---~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la-sgs---~d  197 (318)
                                 .|.+|++..+.  .+...+   .. |......+.|+|+                 +++|+ +.+   .+
T Consensus       198 ~~~~~~~~~~~~v~~~~lgt~~--~~~~~v~~~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~~~  258 (693)
T 3iuj_A          198 GSELSARTDQHKVYFHRLGTAQ--EDDRLVFGAIPAQHHRYVGATVTED-----------------DRFLLISAANSTSG  258 (693)
T ss_dssp             -------CCCCEEEEEETTSCG--GGCEEEESCSGGGCCSEEEEEECTT-----------------SCEEEEEEESSSSC
T ss_pred             cccccccCCCcEEEEEECCCCc--ccceEEEecCCCCCeEEEEEEEcCC-----------------CCEEEEEEccCCCC
Confidence                       37777753322  111122   12 3334567889997                 34443 222   33


Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC---CeEEEEEcCCCcceeeEEeeecCCcEEEE
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD---RKVIIWTSNDYVTWTPFIMNTFDDVVWNV  274 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D---~~i~vw~~~~~~~~~~~~~~~~~~~v~~v  274 (318)
                      +.|+++|+.+++. +...+..+....... |+++   ++.++++...|   ..|.++++.+........+..+...+.  
T Consensus       259 ~~i~~~d~~~~~~-~~~~l~~~~~~~~~~-~~~~---g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--  331 (693)
T 3iuj_A          259 NRLYVKDLSQENA-PLLTVQGDLDADVSL-VDNK---GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--  331 (693)
T ss_dssp             CEEEEEETTSTTC-CCEEEECSSSSCEEE-EEEE---TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--
T ss_pred             cEEEEEECCCCCC-ceEEEeCCCCceEEE-Eecc---CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--
Confidence            5899999876521 112334455555554 5664   24455555444   578888887654211123334444454  


Q ss_pred             EEcCCCCEEEEEeC-CC--eEEEEEEC
Q psy2762         275 SWSLTGDILTVSCG-DN--SVSLWKEN  298 (318)
Q Consensus       275 ~~spdg~~l~s~~~-D~--~v~iW~~~  298 (318)
                      .|+|+++.|+.... |+  .|++|+.+
T Consensus       332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~  358 (693)
T 3iuj_A          332 TVHSGSGYLFAEYMVDATARVEQFDYE  358 (693)
T ss_dssp             EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred             EEEEECCEEEEEEEECCeeEEEEEECC
Confidence            89999998877764 44  56666644

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.79  E-value=1.3e-06  Score=77.19  Aligned_cols=203  Identities=12%  Similarity=0.035  Sum_probs=122.8

Q ss_pred             CCcceeeeeeecCCCCEEEEeeC-----CCcEEEEEcCCCcCCCCCCCCcceEEEEeccc------ccCeEEEEecCCCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSS-----DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH------SGPVWQVAWAHPQF   79 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~-----D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~~~~~   79 (318)
                      +|-..+..++|+++|+++++-..     ++.|.+||+.           +++++.++...      ...+..+++.++ .
T Consensus        64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-----------tg~~~~~~~~~~~~~~~~~~~~~v~vd~~-~  131 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-----------NNQLSRVIYLPPPITLSNSFVNDLAVDLI-H  131 (343)
T ss_dssp             CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-----------TTEEEEEEECCTTTSCTTCCCCEEEEETT-T
T ss_pred             cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-----------CCeEEEEEECChhhcccccccceEEEecC-C
Confidence            56678999999999987776433     5789999986           34555555422      234678888632 3


Q ss_pred             CcEEEEEE---CCCeEEEEeCCCCcEEEEEEecCC-----------------------------CcCeEEEEeeCCCCCc
Q psy2762          80 GTLLASCS---YDRKVIIWRGDNGNWFKYYEYNNH-----------------------------DSSVNSIAWAPKEFGL  127 (318)
Q Consensus        80 ~~~las~s---~Dg~v~vWd~~~~~~~~~~~~~~h-----------------------------~~~v~~v~~~p~~~~~  127 (318)
                      +..+++-.   .++.|.+||+.+++....  +.+|                             ...++.|+|+|+  +.
T Consensus       132 g~~yvtd~~~~~~~~i~v~d~~~g~~~r~--~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d--g~  207 (343)
T 2qe8_A          132 NFVYISDPAPDDKAALIRVDLQTGLAARV--LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE--NE  207 (343)
T ss_dssp             TEEEEEECCSGGGCEEEEEETTTCCEEEE--CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT--SC
T ss_pred             CEEEEEcCccCCCCeEEEEECCCCCEEEE--ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC--CC
Confidence            55556655   688999999887653332  2221                             123688999998  54


Q ss_pred             EEEEeecCCeEEEEEeecC--CC-C-cc--e---eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC
Q psy2762         128 ILACGSSDGTISFLTYMSD--TN-S-WE--S---RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN  198 (318)
Q Consensus       128 ~lasgs~d~~i~i~~~~~~--~~-~-~~--~---~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~  198 (318)
                      .+..+..++. ++|.+...  .. . ..  .   ....++......++++++                 +..+++...++
T Consensus       208 ~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-----------------G~l~va~~~~~  269 (343)
T 2qe8_A          208 WLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-----------------HNIYVGDLAHS  269 (343)
T ss_dssp             EEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-----------------CCEEEEEGGGT
T ss_pred             EEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-----------------CCEEEEccCCC
Confidence            4555555543 44544221  00 0 00  0   011122223445666664                 46788888899


Q ss_pred             eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       199 ~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      .|.+||..+++........ +...+.+++|.|+    +.++++.+....+.+|.
T Consensus       270 ~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~----g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          270 AIGVITSADRAYKLLVTDE-KLSWTDSFNFGSD----GYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             EEEEEETTTTEEEEEEECG-GGSCEEEEEECTT----SCEEEEECCGGGSGGGB
T ss_pred             eEEEEECCCCCEEEEEECC-ceecCCeeEECCC----CcEEEEeCccccccccc
Confidence            9999998455543333222 3456889999985    66777776555554443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.78  E-value=2.3e-05  Score=71.10  Aligned_cols=231  Identities=12%  Similarity=0.077  Sum_probs=134.4

Q ss_pred             eec--CCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--------ccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          20 EMD--YLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--------GHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        20 ~~~--~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .++  +++++|+. |..+++|.|+|+...       ....++.++++        +.. .-..+... | +| +++|+..
T Consensus        88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~-------p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~-p-dG-i~Vs~~g  156 (462)
T 2ece_A           88 NGKPNIERRFLIVPGLRSSRIYIIDTKPN-------PREPKIIKVIEPEEVKKVSGYS-RLHTVHCG-P-DA-IYISALG  156 (462)
T ss_dssp             TCCTTCCSCEEEEEBTTTCCEEEEECCSC-------TTSCEEEEEECHHHHHHHHCEE-EEEEEEEC-S-SC-EEEEEEE
T ss_pred             ccCCCccCCEEEEccCCCCeEEEEECCCC-------CCCceeeeeechhhcccccCCC-cccceeEC-C-Ce-EEEEcCC
Confidence            346  77777654 668899999998521       12235666663        111 22234444 3 46 7777766


Q ss_pred             C------CeEEEEeCCCCcEEEEEEecCCC-cCeEEEEeeCCCCCcEEEEee-------------------cCCeEEEEE
Q psy2762          89 D------RKVIIWRGDNGNWFKYYEYNNHD-SSVNSIAWAPKEFGLILACGS-------------------SDGTISFLT  142 (318)
Q Consensus        89 D------g~v~vWd~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~~lasgs-------------------~d~~i~i~~  142 (318)
                      +      +.|.+.|..+.+.+..+...... ...+.+-|+|+  ...+++..                   .+..|.+||
T Consensus       157 ~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D  234 (462)
T 2ece_A          157 NEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD  234 (462)
T ss_dssp             ETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred             CcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence            6      78999999887765555433222 23456888998  44566653                   367999999


Q ss_pred             eecCCCCcceeeec-c-ccccccee--eeCCCCCCCccccccCCCCCCccceEEEec------CCCeEEEEEccCCeEEE
Q psy2762         143 YMSDTNSWESRKIA-A-HTIGCNAV--SWGPGIGSLSELDLKGSKLGGVAKRLVSGG------CDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       143 ~~~~~~~~~~~~~~-~-h~~~v~~~--~~~p~~~~~~~~~~~~~~~~~~~~~lasgs------~d~~i~iwd~~~~~~~~  212 (318)
                      +..++   ....+. + .......+  +|+|+.                 +++..+.      -+++|.+|..+.+++..
T Consensus       235 ~~~~k---~~~tI~vg~~g~~P~~i~f~~~Pdg-----------------~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~  294 (462)
T 2ece_A          235 LRKRK---RIHSLTLGEENRMALELRPLHDPTK-----------------LMGFINMVVSLKDLSSSIWLWFYEDGKWNA  294 (462)
T ss_dssp             TTTTE---EEEEEESCTTEEEEEEEEECSSTTC-----------------CEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred             CCCCc---EeeEEecCCCCCccceeEeeECCCC-----------------CEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence            85331   122222 1 11122233  448763                 3433333      56688887766665433


Q ss_pred             EEEc--ccC----------------CCCeeEEEEccCCCCCccEEEEEe-CCCeEEEEEcCCCccee-eEEeeec-----
Q psy2762         213 ETKL--ENH----------------SDWVRDVAWAPSWGLSKCMIASCS-QDRKVIIWTSNDYVTWT-PFIMNTF-----  267 (318)
Q Consensus       213 ~~~~--~~h----------------~~~V~~v~~sp~~~~~~~~l~s~s-~D~~i~vw~~~~~~~~~-~~~~~~~-----  267 (318)
                      ...+  ...                ......|.+||+    +++|..+. ..+.|.++++....... ......-     
T Consensus       295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D----GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~  370 (462)
T 2ece_A          295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD----DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHR  370 (462)
T ss_dssp             EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT----SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTC
T ss_pred             EEEEeCCCccccccccccccccccCCCceeEEEECCC----CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecc
Confidence            3321  110                134678999997    66555555 47899999986432111 1111111     


Q ss_pred             ---------CCcEEEEEEcCCCCEEEEEe
Q psy2762         268 ---------DDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       268 ---------~~~v~~v~~spdg~~l~s~~  287 (318)
                               ...-..++++|||++|..+.
T Consensus       371 ~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          371 ADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             BCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             ccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence                     01246899999999999998

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.78  E-value=8.5e-09  Score=92.59  Aligned_cols=183  Identities=12%  Similarity=0.056  Sum_probs=95.6

Q ss_pred             CCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          79 FGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        79 ~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      ++.++++++.|+.|..||..+++.  .+++..  ..+.+..+.++  +.++++++.|+.|..||...++..|.   ...+
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~--~W~~~~--~~~~s~p~~~~--g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~   78 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSI--KWTLKE--DPVLQVPTHVE--EPAFLPDPNDGSLYTLGSKNNEGLTK---LPFT   78 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCE--EEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEE---CSCC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCE--EEEecC--CCceecceEcC--CCEEEEeCCCCEEEEEECCCCceeee---eecc
Confidence            468899999999999999998874  344443  34444444454  45677778999999998765543222   1111


Q ss_pred             ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         159 TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      ....  +..+|..              ..+..+++++.|+.|+.||..+++..  ..+..+.    .+.++|+    +..
T Consensus        79 ~~~~--~~~sp~~--------------~~~~~v~~g~~dg~v~a~D~~tG~~~--w~~~~~~----~~~~~p~----~~~  132 (369)
T 2hz6_A           79 IPEL--VQASPCR--------------SSDGILYMGKKQDIWYVIDLLTGEKQ--QTLSSAF----ADSLSPS----TSL  132 (369)
T ss_dssp             HHHH--HTTCSCC-------------------CCCCEEEEEEEEECCC--------------------------------
T ss_pred             Cccc--cccCceE--------------ecCCEEEEEeCCCEEEEEECCCCcEE--EEecCCC----ccccccc----CCE
Confidence            1000  0011110              00235778889999999999887642  2333332    2345663    667


Q ss_pred             EEEEeCCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCC---CEEEEEeCCCeEEEEEECCCC
Q psy2762         239 IASCSQDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTG---DILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg---~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |++++.|+.|+.||..+.. .|... ....    ...++++++   ..++.++.||.|..||..++.
T Consensus       133 v~~~~~dg~v~a~d~~tG~~~W~~~-~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~  194 (369)
T 2hz6_A          133 LYLGRTEYTITMYDTKTRELRWNAT-YFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD  194 (369)
T ss_dssp             EEEEEEEEEEECCCSSSSSCCCEEE-EEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred             EEEEecCCEEEEEECCCCCEEEeEe-cccc----cCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence            8889999999999987654 24322 1111    223344432   456678899999999977654

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.72  E-value=9.8e-05  Score=66.09  Aligned_cols=241  Identities=10%  Similarity=-0.034  Sum_probs=135.4

Q ss_pred             eecCCCCEEEEeeC--CC---cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-------
Q psy2762          20 EMDYLGLYLATCSS--DH---TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-------   87 (318)
Q Consensus        20 ~~~~~g~~l~s~s~--D~---~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-------   87 (318)
                      ...|++.+++.+..  ..   +|.++|..           +++++.++.....+  .+.+++  ++++|+.+.       
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~-----------t~~~~~~i~~g~~p--~i~~sp--Dg~~lyv~n~~~~~~~   91 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAG-----------SGSILGHVNGGFLP--NPVAAH--SGSEFALASTSFSRIA   91 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECC-----------CCeEEEEecCCCCC--CeEECC--CCCEEEEEeccccccc
Confidence            34578887776643  22   88999986           35667777654444  888874  588888876       


Q ss_pred             ---CCCeEEEEeCCCCcEEEEEEec--C---CCcCeEEEEeeCCCCCcEEEEeec--CCeEEEEEeecCCCCcceee-ec
Q psy2762          88 ---YDRKVIIWRGDNGNWFKYYEYN--N---HDSSVNSIAWAPKEFGLILACGSS--DGTISFLTYMSDTNSWESRK-IA  156 (318)
Q Consensus        88 ---~Dg~v~vWd~~~~~~~~~~~~~--~---h~~~v~~v~~~p~~~~~~lasgs~--d~~i~i~~~~~~~~~~~~~~-~~  156 (318)
                         .++.|.+||..+.+......+.  .   +......++|+|+  ++++..++.  ++.|.++| ..++   .... +.
T Consensus        92 rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spD--G~~l~v~n~~~~~~v~viD-~t~~---~~~~~i~  165 (373)
T 2mad_H           92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPN--NADLLFFQFAAGPAVGLVV-QGGS---SDDQLLS  165 (373)
T ss_pred             cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCC--CCEEEEEecCCCCeEEEEE-CCCC---EEeEEcC
Confidence               3688999999876544433332  0   0123457899999  555665553  57888887 5443   1122 21


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE---cccCCCCe-eEEEEccCC
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---LENHSDWV-RDVAWAPSW  232 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---~~~h~~~V-~~v~~sp~~  232 (318)
                      . . .  ++.+.|..                ...+++.+.||.+.++|. +++......   ......++ ....|.++ 
T Consensus       166 ~-~-~--~~~~~~~~----------------~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~-  223 (373)
T 2mad_H          166 S-P-T--CYHIHPGA----------------PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK-  223 (373)
T ss_pred             C-C-c--eEEEEeCC----------------CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec-
Confidence            1 1 1  12233321                134566778999999998 654331111   00111121 22455664 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee----------cCCcEEEEEEcCCCCEEEEEeC----------CCeE
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT----------FDDVVWNVSWSLTGDILTVSCG----------DNSV  292 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~----------~~~~v~~v~~spdg~~l~s~~~----------D~~v  292 (318)
                        ++.++. .+..+.+.+.|..............          .......++++|||+.|..+..          ++.|
T Consensus       224 --~~~~~~-~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V  300 (373)
T 2mad_H          224 --SGRIVW-PVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV  300 (373)
T ss_pred             --CCEEEE-EcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence              233333 3467888888886432111010100          0122445789999988877653          3578


Q ss_pred             EEEEECCCCceEEE
Q psy2762         293 SLWKENTDGAWQCI  306 (318)
Q Consensus       293 ~iW~~~~~~~~~~~  306 (318)
                      .+.|..+......+
T Consensus       301 ~VID~~t~~vv~~i  314 (373)
T 2mad_H          301 TSVTGLVGQTSSQI  314 (373)
T ss_pred             EEEECCCCEEEEEE
Confidence            88886654333333

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.70  E-value=2.9e-06  Score=73.63  Aligned_cols=199  Identities=14%  Similarity=0.111  Sum_probs=118.9

Q ss_pred             EEEecccccCeEEEEecCCCCCc-EEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGT-LLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT  137 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~-~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~  137 (318)
                      +..+..+.....+..|.+  +++ ++++...++.|..|+.. +.. ..  +..+...++.+++.|+  +.++++...++.
T Consensus        37 ~~~l~~~~~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~~-g~~-~~--~~~~~~~~~gl~~d~d--G~l~v~~~~~~~  108 (305)
T 3dr2_A           37 LLTLYDQATWSEGPAWWE--AQRTLVWSDLVGRRVLGWRED-GTV-DV--LLDATAFTNGNAVDAQ--QRLVHCEHGRRA  108 (305)
T ss_dssp             CEEEECCCSSEEEEEEEG--GGTEEEEEETTTTEEEEEETT-SCE-EE--EEESCSCEEEEEECTT--SCEEEEETTTTE
T ss_pred             eEEEecCCcCccCCeEeC--CCCEEEEEECCCCEEEEEeCC-CCE-EE--EeCCCCccceeeECCC--CCEEEEECCCCE
Confidence            344455566778889974  466 77787788999999974 432 22  2234567899999998  666766556677


Q ss_pred             EEEEEeecCCCCcceeeeccc-----ccccceeeeCCCCCCCccccccCCCCCCccceEEE----ecC------------
Q psy2762         138 ISFLTYMSDTNSWESRKIAAH-----TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS----GGC------------  196 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las----gs~------------  196 (318)
                      |..++.. +.    ...+..+     ...++.+++.|+                 +..+++    |..            
T Consensus       109 v~~~~~~-g~----~~~~~~~~~~~~~~~~~~i~~d~d-----------------G~l~~td~~~g~~~~~~~~~~~~~~  166 (305)
T 3dr2_A          109 ITRSDAD-GQ----AHLLVGRYAGKRLNSPNDLIVARD-----------------GAIWFTDPPFGLRKPSQGCPADPEL  166 (305)
T ss_dssp             EEEECTT-SC----EEEEECEETTEECSCCCCEEECTT-----------------SCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred             EEEECCC-CC----EEEEEeccCCCccCCCCCEEECCC-----------------CCEEEeCcCCCcccccccccccccc
Confidence            8777642 21    2222111     123567778775                 344454    332            


Q ss_pred             -CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC------CeEEEEEcCCCcceeeEEee-ecC
Q psy2762         197 -DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD------RKVIIWTSNDYVTWTPFIMN-TFD  268 (318)
Q Consensus       197 -d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D------~~i~vw~~~~~~~~~~~~~~-~~~  268 (318)
                       .+.|..+|..+++.....    .....+.++|+|+    +..|..+...      +.|.+|++............ ...
T Consensus       167 ~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spd----g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~  238 (305)
T 3dr2_A          167 AHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPD----EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD  238 (305)
T ss_dssp             SCEEEEEECSSSCCCEEEE----EESSEEEEEECTT----SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred             CCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCC----CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence             245777776555433221    2234688999996    6656665554      78999987653200011111 112


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      .....++++++|++.+ +..+ .|.+|+.
T Consensus       239 ~~pdgi~~d~~G~lwv-~~~~-gv~~~~~  265 (305)
T 3dr2_A          239 GLPDGFCVDRGGWLWS-SSGT-GVCVFDS  265 (305)
T ss_dssp             SCCCSEEECTTSCEEE-CCSS-EEEEECT
T ss_pred             CCCCeEEECCCCCEEE-ecCC-cEEEECC
Confidence            3345789999999654 4444 4888874

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.65  E-value=4.3e-05  Score=66.96  Aligned_cols=192  Identities=10%  Similarity=-0.030  Sum_probs=113.7

Q ss_pred             eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN  148 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~  148 (318)
                      ..+..|++ ..+.++++...++.|..||..++.. ..+.   ....+.++++.|+  +.++++ +.+ .|.+|+...+. 
T Consensus        51 ~egp~~~~-~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~v~~i~~~~d--g~l~v~-~~~-gl~~~d~~~g~-  120 (326)
T 2ghs_A           51 GEGPTFDP-ASGTAWWFNILERELHELHLASGRK-TVHA---LPFMGSALAKISD--SKQLIA-SDD-GLFLRDTATGV-  120 (326)
T ss_dssp             EEEEEEET-TTTEEEEEEGGGTEEEEEETTTTEE-EEEE---CSSCEEEEEEEET--TEEEEE-ETT-EEEEEETTTCC-
T ss_pred             CcCCeEeC-CCCEEEEEECCCCEEEEEECCCCcE-EEEE---CCCcceEEEEeCC--CeEEEE-ECC-CEEEEECCCCc-
Confidence            45678864 3466777777889999999887643 2222   2467999999998  555554 344 47777753222 


Q ss_pred             Ccceeeeccc-----ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC----CeEEEEEccCCeEEEEEEcccC
Q psy2762         149 SWESRKIAAH-----TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD----NLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       149 ~~~~~~~~~h-----~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d----~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                         ...+...     ...++.+.++|+                 +..+++...+    +...||.+.+++....   ..+
T Consensus       121 ---~~~~~~~~~~~~~~~~~~i~~d~~-----------------G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~---~~~  177 (326)
T 2ghs_A          121 ---LTLHAELESDLPGNRSNDGRMHPS-----------------GALWIGTMGRKAETGAGSIYHVAKGKVTKL---FAD  177 (326)
T ss_dssp             ---EEEEECSSTTCTTEEEEEEEECTT-----------------SCEEEEEEETTCCTTCEEEEEEETTEEEEE---EEE
T ss_pred             ---EEEEeeCCCCCCCCCCCCEEECCC-----------------CCEEEEeCCCcCCCCceEEEEEeCCcEEEe---eCC
Confidence               1222111     124567778876                 3333333211    2334444334443221   122


Q ss_pred             CCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcC--CC-cceeeEEee---ecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762         220 SDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSN--DY-VTWTPFIMN---TFDDVVWNVSWSLTGDILTVSCGDNSV  292 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~--~~-~~~~~~~~~---~~~~~v~~v~~spdg~~l~s~~~D~~v  292 (318)
                      ....+.++|+|+    +..| ++.+.++.|.+|+..  +. .........   .....+..++++++|++.++...++.|
T Consensus       178 ~~~~~~i~~s~d----g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v  253 (326)
T 2ghs_A          178 ISIPNSICFSPD----GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV  253 (326)
T ss_dssp             ESSEEEEEECTT----SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE
T ss_pred             CcccCCeEEcCC----CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE
Confidence            334678999996    5544 555567899999975  32 111111111   123457889999999988777677889


Q ss_pred             EEEEE
Q psy2762         293 SLWKE  297 (318)
Q Consensus       293 ~iW~~  297 (318)
                      .+|+.
T Consensus       254 ~~~d~  258 (326)
T 2ghs_A          254 DRYDT  258 (326)
T ss_dssp             EEECT
T ss_pred             EEECC
Confidence            99975

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.61  E-value=2.2e-08  Score=89.93  Aligned_cols=206  Identities=15%  Similarity=0.090  Sum_probs=104.4

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~  103 (318)
                      ++.++++++.|+.|..||..           +|+++-.++.  +.+.+..+..  ++..+++++.|+.|..||..+++..
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~-----------tG~~~W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~   72 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKR-----------TGSIKWTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGL   72 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETT-----------TCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCS
T ss_pred             eCCEEEEEcCCCEEEEEECC-----------CCCEEEEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCcee
Confidence            57789999999999999986           3555555554  4554443332  3667888889999999999776532


Q ss_pred             EEEEecCCCc-CeEEEEeeCCC-CCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccC
Q psy2762         104 KYYEYNNHDS-SVNSIAWAPKE-FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG  181 (318)
Q Consensus       104 ~~~~~~~h~~-~v~~v~~~p~~-~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~  181 (318)
                        +.+..+.. .+   ..+|-- .+..+++++.|+.|..||...++..|.   ...+.    ...++|.           
T Consensus        73 --w~~~~~~~~~~---~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~---~~~~~----~~~~~p~-----------  129 (369)
T 2hz6_A           73 --TKLPFTIPELV---QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT---LSSAF----ADSLSPS-----------  129 (369)
T ss_dssp             --EECSCCHHHHH---TTCSCC-----CCCCEEEEEEEEECCC-------------------------------------
T ss_pred             --eeeeccCcccc---ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE---ecCCC----ccccccc-----------
Confidence              22222211 11   011110 123466788899999998765553332   11111    1223332           


Q ss_pred             CCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-cee
Q psy2762         182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-TWT  260 (318)
Q Consensus       182 ~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-~~~  260 (318)
                            +..+++++.|+.|+.||..+++..-.......    ....++++... ...++.++.|+.|..||..+.. .|.
T Consensus       130 ------~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~-~~~v~~~~~dg~v~a~d~~tG~~~W~  198 (369)
T 2hz6_A          130 ------TSLLYLGRTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDY-KMSHFVSNGDGLVVTVDSESGDVLWI  198 (369)
T ss_dssp             ---------EEEEEEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTC-CCCEEEEETSCEEEEECTTTCCEEEE
T ss_pred             ------CCEEEEEecCCEEEEEECCCCCEEEeEecccc----cCccccCCccc-cceEEEECCCCEEEEEECCCCcEEEE
Confidence                  35688899999999999887753212211111    11222221101 1456778899999999987653 222


Q ss_pred             eEEeeecCCcEE-EEEEcCCCCE
Q psy2762         261 PFIMNTFDDVVW-NVSWSLTGDI  282 (318)
Q Consensus       261 ~~~~~~~~~~v~-~v~~spdg~~  282 (318)
                          .....++. ...++++|..
T Consensus       199 ----~~~~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          199 ----QNYASPVVAFYVWQREGLR  217 (369)
T ss_dssp             ----EECSSCEEEEEECTTSSCE
T ss_pred             ----ecCCCceEEEEEecCCceE
Confidence                12334443 3455666653

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.60  E-value=9e-06  Score=78.70  Aligned_cols=53  Identities=9%  Similarity=0.235  Sum_probs=38.8

Q ss_pred             CeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         246 RKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       246 ~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      +.|..||+.+.. .|+    ..+..++++..++++|..++.++.|+.+++||..++..
T Consensus       457 g~l~A~D~~tG~~~W~----~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~  510 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWS----VEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (677)
T ss_dssp             EEEEEEETTTTEEEEE----EEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cEEEEEeCCCCcEEee----cCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence            778999987643 222    22334556667778888999999999999999887654

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.59  E-value=7.9e-06  Score=79.26  Aligned_cols=54  Identities=17%  Similarity=0.338  Sum_probs=38.1

Q ss_pred             CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ++.|+.||+.+.. .|+.    .+..+++...++..|.+++.++.|+.++.||.+++..
T Consensus       454 ~g~l~A~D~~tG~~~W~~----~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~  508 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEV----PYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK  508 (689)
T ss_dssp             EEEEEEEETTTTEEEEEE----EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ceeEEEEECCCCCeEeEc----cCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence            4779999987653 2322    2223344456677888999999999999999888653

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.48  E-value=6e-05  Score=67.51  Aligned_cols=225  Identities=10%  Similarity=-0.015  Sum_probs=128.7

Q ss_pred             eeecCCCCEEEEeeC-----CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE------
Q psy2762          19 AEMDYLGLYLATCSS-----DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS------   87 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~-----D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s------   87 (318)
                      ....|++..++....     +++|.+.|..           +++++.++.....+  .+.+++  +|++|+.++      
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~-----------t~~v~~~I~vG~~P--~va~sp--DG~~lyVan~~~~r~  102 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGE-----------AGRVIGMIDGGFLP--NPVVAD--DGSFIAHASTVFSRI  102 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETT-----------TTEEEEEEEECSSC--EEEECT--TSSCEEEEEEEEEET
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECC-----------CCeEEEEEECCCCC--cEEECC--CCCEEEEEccccccc
Confidence            445789988777654     6899999986           45777777755555  388874  588777765      


Q ss_pred             ----CCCeEEEEeCCCCcEEEEEEecC-----CCcCeEEEEeeCCCCCcEEEEee--cCCeEEEEEeecCCCCcceeeec
Q psy2762          88 ----YDRKVIIWRGDNGNWFKYYEYNN-----HDSSVNSIAWAPKEFGLILACGS--SDGTISFLTYMSDTNSWESRKIA  156 (318)
Q Consensus        88 ----~Dg~v~vWd~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~~~lasgs--~d~~i~i~~~~~~~~~~~~~~~~  156 (318)
                          .+++|.+||..+.+.+....+..     .......++|+|+  +.++..+.  .++.|.++|....+   ....+.
T Consensus       103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spD--Gk~lyVan~~~~~~VsVID~~t~~---vv~tI~  177 (386)
T 3sjl_D          103 ARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPD--GKTLLFYQFSPAPAVGVVDLEGKA---FKRMLD  177 (386)
T ss_dssp             TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTT--SSEEEEEECSSSCEEEEEETTTTE---EEEEEE
T ss_pred             ccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCC--CCEEEEEEcCCCCeEEEEECCCCc---EEEEEE
Confidence                36789999999887655544432     0124567899999  55555444  36889999874432   112221


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEE--cccCCCCee-EEEEccCC
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETK--LENHSDWVR-DVAWAPSW  232 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~--~~~h~~~V~-~v~~sp~~  232 (318)
                      .  .++ ...+ |..                .+.+++.+.||++-+.++.. ++......  +..-..++. ...|.+. 
T Consensus       178 v--~g~-~~~~-P~g----------------~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~-  236 (386)
T 3sjl_D          178 V--PDC-YHIF-PTA----------------PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK-  236 (386)
T ss_dssp             C--CSE-EEEE-EEE----------------TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-
T ss_pred             C--CCc-ceee-cCC----------------CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC-
Confidence            1  111 1111 211                23566778899988888765 43221111  111112221 2355422 


Q ss_pred             CCCccEEEEEeCCCeEEEEEcCCCccee--eEEeee--------cCCcEEEEEEcCCCCEEEEEe
Q psy2762         233 GLSKCMIASCSQDRKVIIWTSNDYVTWT--PFIMNT--------FDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       233 ~~~~~~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~--------~~~~v~~v~~spdg~~l~s~~  287 (318)
                        +|+++. .+.+++|.+.|..+.....  +..+..        ......-++++|+++.|..+.
T Consensus       237 --dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~  298 (386)
T 3sjl_D          237 --AGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV  298 (386)
T ss_dssp             --TTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred             --CCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence              354433 6668999999986542100  000000        011223477899998888764

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.45  E-value=5.9e-05  Score=68.46  Aligned_cols=201  Identities=16%  Similarity=0.135  Sum_probs=116.1

Q ss_pred             cEEEEEECCCeEEEEeCCCC--cEEEEEEec------CCC-cCeEEEEeeCCCCCcEEEEeecC------CeEEEEEeec
Q psy2762          81 TLLASCSYDRKVIIWRGDNG--NWFKYYEYN------NHD-SSVNSIAWAPKEFGLILACGSSD------GTISFLTYMS  145 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~--~~~~~~~~~------~h~-~~v~~v~~~p~~~~~~lasgs~d------~~i~i~~~~~  145 (318)
                      .+++++-.+.+|.|.|..+.  +......++      ... ...-.+.+.|+  + +++++..+      +.|.++|...
T Consensus        97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T  173 (462)
T 2ece_A           97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYS  173 (462)
T ss_dssp             EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred             EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCC
Confidence            45556667889999998643  222222221      111 13345677888  5 55555555      6788876532


Q ss_pred             CCCCcceeeec-c-cccc-cceeeeCCCCCCCccccccCCCCCCccceEEEec-------------------CCCeEEEE
Q psy2762         146 DTNSWESRKIA-A-HTIG-CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-------------------CDNLIKIW  203 (318)
Q Consensus       146 ~~~~~~~~~~~-~-h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-------------------~d~~i~iw  203 (318)
                      .+   .+..+. + .... -..+.|+|+                 ++.+++..                   .+.+|.+|
T Consensus       174 ~~---v~~~~~~~~~~~~~~Yd~~~~p~-----------------~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~  233 (462)
T 2ece_A          174 FE---PLGKWEIDRGDQYLAYDFWWNLP-----------------NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW  233 (462)
T ss_dssp             CC---EEEECCSBCTTCCCCCCEEEETT-----------------TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred             Ce---EEEEEccCCCCccccceEEECCC-----------------CCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence            22   122222 1 1111 124566775                 34566653                   47899999


Q ss_pred             EccCCeEEEEEEcccCCCCeeEEEE--ccCCCCCccEEEEEe------CCCeEEEEEcCCCcceeeEE---eee--c---
Q psy2762         204 KQEGDKWIEETKLENHSDWVRDVAW--APSWGLSKCMIASCS------QDRKVIIWTSNDYVTWTPFI---MNT--F---  267 (318)
Q Consensus       204 d~~~~~~~~~~~~~~h~~~V~~v~~--sp~~~~~~~~l~s~s------~D~~i~vw~~~~~~~~~~~~---~~~--~---  267 (318)
                      |+.+++..+...+.........|.|  +|+    +.++..++      .+++|.+|..... .+....   +..  .   
T Consensus       234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pd----g~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~  308 (462)
T 2ece_A          234 DLRKRKRIHSLTLGEENRMALELRPLHDPT----KLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGN  308 (462)
T ss_dssp             ETTTTEEEEEEESCTTEEEEEEEEECSSTT----CCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSS
T ss_pred             ECCCCcEeeEEecCCCCCccceeEeeECCC----CCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCcccccc
Confidence            9988765554444212223456666  886    55554444      6778887765442 222111   111  0   


Q ss_pred             -----------CCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECCCCceEEEeee
Q psy2762         268 -----------DDVVWNVSWSLTGDILTVSCG-DNSVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       268 -----------~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~~~~~~~~~~~  309 (318)
                                 ......+.+||||++|..+.+ .++|+++|+...+..+.+..+
T Consensus       309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I  362 (462)
T 2ece_A          309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKV  362 (462)
T ss_dssp             CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred             ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEE
Confidence                       134678999999999988875 779999998766656655554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.41  E-value=2.5e-05  Score=75.36  Aligned_cols=255  Identities=8%  Similarity=0.026  Sum_probs=135.4

Q ss_pred             eeeecC-CCCEEEEeeCCC-----------cEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEEE
Q psy2762          18 DAEMDY-LGLYLATCSSDH-----------TVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus        18 ~~~~~~-~g~~l~s~s~D~-----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~la   84 (318)
                      .+++.+ +|++++.||.+.           .+.+||....         ....+..+. .+.....++++..  ++++++
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~---------~w~~~~~~~~~~~~~~~~~~~~~--~g~lyv  258 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG---------IVSDRTVTVTKHDMFCPGISMDG--NGQIVV  258 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC---------CBCCCEEEECSCCCSSCEEEECT--TSCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCC---------cEEeCcccCCCCCCccccccCCC--CCCEEE
Confidence            455666 888888888654           5788887632         222222221 2222233344432  588999


Q ss_pred             EEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cC-----CeEEEEEeecCCCCcceeee--
Q psy2762          85 SCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SD-----GTISFLTYMSDTNSWESRKI--  155 (318)
Q Consensus        85 s~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d-----~~i~i~~~~~~~~~~~~~~~--  155 (318)
                      .||. +..+.+||+.+.++.....+..... -.++++.++  +++++.|+ .+     ..+.+||+..  +.|.....  
T Consensus       259 ~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~d--g~iyv~GG~~~~~~~~~~~e~yd~~t--~~W~~~~~~~  333 (656)
T 1k3i_A          259 TGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSPSS--KTWTSLPNAK  333 (656)
T ss_dssp             ECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTT--SCEEEECCCCCSSSCCCCEEEEETTT--TEEEEETTSC
T ss_pred             eCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecC--CeEEEEeCcccCCcccccceEeCCCC--CcceeCCCcc
Confidence            9885 4689999998877765433322111 123444555  67888887 34     4567777532  23432110  


Q ss_pred             -cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecC---------CCeEEEEEccCCeEEEEEEcccC------
Q psy2762         156 -AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC---------DNLIKIWKQEGDKWIEETKLENH------  219 (318)
Q Consensus       156 -~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~---------d~~i~iwd~~~~~~~~~~~~~~h------  219 (318)
                       ...........+..+                 ++.++.|+.         ...+..||..++.+.........      
T Consensus       334 ~~p~~~~~~~~~~~~~-----------------~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~  396 (656)
T 1k3i_A          334 VNPMLTADKQGLYRSD-----------------NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP  396 (656)
T ss_dssp             SGGGCCCCTTGGGTTT-----------------CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred             ccccccccccceeecC-----------------CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence             000000000001110                 122233333         34678889877764322111110      


Q ss_pred             -CCCeeEEEEccCCCCCccEEEEEeCCC-----------eEEEEEcCCCcceeeEE-eeecCCc-EEEEEEcCCCCEEEE
Q psy2762         220 -SDWVRDVAWAPSWGLSKCMIASCSQDR-----------KVIIWTSNDYVTWTPFI-MNTFDDV-VWNVSWSLTGDILTV  285 (318)
Q Consensus       220 -~~~V~~v~~sp~~~~~~~~l~s~s~D~-----------~i~vw~~~~~~~~~~~~-~~~~~~~-v~~v~~spdg~~l~s  285 (318)
                       ...-.++.|...   ++++++.||.+.           .|.+||..... |.... ....... -.++...|+|+.++.
T Consensus       397 ~~~~~~av~~~~~---~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~mp~~R~~~~~~~l~~g~i~v~  472 (656)
T 1k3i_A          397 DAMCGNAVMYDAV---KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLPDGSTFIT  472 (656)
T ss_dssp             CCBTCEEEEEETT---TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECTTSCEEEE
T ss_pred             CCCCCceEeccCC---CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC-eeEEccCCCCCCcccCCeEECCCCCEEEE
Confidence             112345555442   477888888643           57778776532 43211 0111222 234567789999999


Q ss_pred             EeCC-----------CeEEEEEECCCCceEEEeeec
Q psy2762         286 SCGD-----------NSVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       286 ~~~D-----------~~v~iW~~~~~~~~~~~~~~~  310 (318)
                      ||.+           .++.+||..+ +.|..+..+.
T Consensus       473 GG~~~~~~~~~~~~~~~v~~ydp~t-~~W~~~~~~~  507 (656)
T 1k3i_A          473 GGQRRGIPFEDSTPVFTPEIYVPEQ-DTFYKQNPNS  507 (656)
T ss_dssp             CCBSBCCTTCCCSBCCCCEEEEGGG-TEEEECCCCS
T ss_pred             CCcccCcCcCCCCcccceEEEcCCC-CceeecCCCC
Confidence            9865           4689999655 6888766543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.41  E-value=0.00013  Score=61.82  Aligned_cols=198  Identities=9%  Similarity=-0.011  Sum_probs=121.1

Q ss_pred             ceeeeeeecCCCCEEEEeeC--CCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc-CeEEEEecCCCCCcEEEEEECCC
Q psy2762          14 DMIHDAEMDYLGLYLATCSS--DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG-PVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~--D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      .....+.|++++.+.++.+.  +++|++.|+.           +++++.++..... ....+.+.   .+.+.++.-.++
T Consensus        21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-----------tg~v~~~i~l~~~~fgeGi~~~---g~~lyv~t~~~~   86 (266)
T 2iwa_A           21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQ-----------TGKVENIHKMDDSYFGEGLTLL---NEKLYQVVWLKN   86 (266)
T ss_dssp             CCEEEEEECSTTEEEEEECSTTTCEEEEEETT-----------TCCEEEEEECCTTCCEEEEEEE---TTEEEEEETTCS
T ss_pred             CCcccEEEeCCCeEEEECCCCCCCEEEEEECC-----------CCCEEEEEecCCCcceEEEEEe---CCEEEEEEecCC
Confidence            45678999998876666654  6899999987           3566666542221 22345553   134444445578


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---ccee
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNAV  165 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~~  165 (318)
                      .+.++|..+.+.+......  ...  ...+++++ ..++++ ..++.|.++|.....   ....+.  .+..+   .+.+
T Consensus        87 ~v~viD~~t~~v~~~i~~g--~~~--g~glt~Dg-~~l~vs-~gs~~l~viD~~t~~---v~~~I~Vg~~~~p~~~~nel  157 (266)
T 2iwa_A           87 IGFIYDRRTLSNIKNFTHQ--MKD--GWGLATDG-KILYGS-DGTSILYEIDPHTFK---LIKKHNVKYNGHRVIRLNEL  157 (266)
T ss_dssp             EEEEEETTTTEEEEEEECC--SSS--CCEEEECS-SSEEEE-CSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEE
T ss_pred             EEEEEECCCCcEEEEEECC--CCC--eEEEEECC-CEEEEE-CCCCeEEEEECCCCc---EEEEEEECCCCcccccceeE
Confidence            9999999887655544332  111  23456663 344544 467888888763322   122222  11112   3455


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC-----------CCCeeEEEEccCCCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH-----------SDWVRDVAWAPSWGL  234 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h-----------~~~V~~v~~sp~~~~  234 (318)
                      .|. +                 +..++....++.|.+.|..+++......+.+.           ....+.|+|+|+   
T Consensus       158 e~~-d-----------------g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~---  216 (266)
T 2iwa_A          158 EYI-N-----------------GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE---  216 (266)
T ss_dssp             EEE-T-----------------TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT---
T ss_pred             EEE-C-----------------CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC---
Confidence            554 2                 34456666678999999998876555544321           134689999997   


Q ss_pred             CccEEEEEeCCCeEEEEEcCC
Q psy2762         235 SKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      ...+++++....+|.+-++..
T Consensus       217 ~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          217 NKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             TTEEEEEETTCSEEEEEEEEE
T ss_pred             CCEEEEECCCCCeEEEEEEec
Confidence            357888888888888887654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.33  E-value=0.0003  Score=61.20  Aligned_cols=237  Identities=11%  Similarity=0.042  Sum_probs=129.3

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec--------------------ccccCeEEEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK--------------------GHSGPVWQVA   73 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------------------~h~~~V~~v~   73 (318)
                      .....++++++|+++.++..++.|..|+....           . +..+.                    ...+...+++
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~   86 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS-----------G-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS   86 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTT-----------C-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCC-----------c-eEEEecccccccccccccccchhccccCCCCceEE
Confidence            34677889999997788888999999987521           1 11111                    1123577888


Q ss_pred             ecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEE-ecC-CCcCeEEEEeeC-CCCCcEEEEeec----------------
Q psy2762          74 WAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYE-YNN-HDSSVNSIAWAP-KEFGLILACGSS----------------  134 (318)
Q Consensus        74 ~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~-~~~-h~~~v~~v~~~p-~~~~~~lasgs~----------------  134 (318)
                      +.+ .++. |..+...+.|..+|..++....... ..+ .....+.+++.| +  +.+.++-..                
T Consensus        87 ~~~-~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~  162 (322)
T 2fp8_A           87 YNL-QNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSD  162 (322)
T ss_dssp             EET-TTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTC
T ss_pred             EcC-CCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCC--CEEEEECCcccccccccceehcccC
Confidence            853 1344 5555555568888876543212111 111 113468899998 7  445554322                


Q ss_pred             -CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccce-EEEecCCCeEEEEEccCC---e
Q psy2762         135 -DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-LVSGGCDNLIKIWKQEGD---K  209 (318)
Q Consensus       135 -d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-lasgs~d~~i~iwd~~~~---~  209 (318)
                       ++.|..++.  ...  ....+.......+.++++|+                 +.. +++-..++.|++|++...   +
T Consensus       163 ~~g~v~~~d~--~~~--~~~~~~~~~~~p~gia~~~d-----------------g~~lyv~d~~~~~I~~~~~~~~~~~~  221 (322)
T 2fp8_A          163 KTGRLIKYDP--STK--ETTLLLKELHVPGGAEVSAD-----------------SSFVLVAEFLSHQIVKYWLEGPKKGT  221 (322)
T ss_dssp             CCEEEEEEET--TTT--EEEEEEEEESCCCEEEECTT-----------------SSEEEEEEGGGTEEEEEESSSTTTTC
T ss_pred             CCceEEEEeC--CCC--EEEEeccCCccCcceEECCC-----------------CCEEEEEeCCCCeEEEEECCCCcCCc
Confidence             244555543  211  11111111123456788876                 333 444466688999987642   2


Q ss_pred             EEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC----------CCeEEEEEcCCCcceeeEEeeec----CCcEEEEE
Q psy2762         210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ----------DRKVIIWTSNDYVTWTPFIMNTF----DDVVWNVS  275 (318)
Q Consensus       210 ~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~----------D~~i~vw~~~~~~~~~~~~~~~~----~~~v~~v~  275 (318)
                      ......+.   . ...+++.++    |.+.++...          .+.|..++.....   ...+...    -..+..+.
T Consensus       222 ~~~~~~~~---g-P~gi~~d~~----G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~---~~~~~~~~g~~~~~~~~~~  290 (322)
T 2fp8_A          222 AEVLVKIP---N-PGNIKRNAD----GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNI---LEVIPLPPPFAGEHFEQIQ  290 (322)
T ss_dssp             EEEEEECS---S-EEEEEECTT----SCEEEEEEEETTSSTTSCEEEEEEEECTTSCE---EEEEECCTTTTTSCCCEEE
T ss_pred             cceEEeCC---C-CCCeEECCC----CCEEEEecCcccccccCCCccEEEEECCCCCE---EEEEECCCCCccccceEEE
Confidence            21112222   2 677889886    666666544          3567777764321   1222211    13466666


Q ss_pred             EcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         276 WSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       276 ~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      + .+|+++++....+.|..++...
T Consensus       291 ~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          291 E-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             E-ETTEEEEECSSCSEEEEEEC--
T ss_pred             E-eCCEEEEeecCCCceEEEeccc
Confidence            6 4676666666778888887654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.29  E-value=0.00023  Score=66.86  Aligned_cols=253  Identities=13%  Similarity=0.021  Sum_probs=142.1

Q ss_pred             CCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEE--EecccccCeEEEEecC-CCCCcEEEEEE-----------
Q psy2762          23 YLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIA--ELKGHSGPVWQVAWAH-PQFGTLLASCS-----------   87 (318)
Q Consensus        23 ~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~h~~~V~~v~~~~-~~~~~~las~s-----------   87 (318)
                      +||++|+.+.. ++.|.+-|++.           .++..  ++..- .....+++.. | ++++++.++           
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t-----------~~~~~ii~ip~g-~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~  165 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDV-----------MKCDAILEIPNA-KGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGT  165 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTT-----------TEEEEEEECSSC-CSEEEEEECCSS-BCSEEEEEECSCEESSCSSS
T ss_pred             cCCCEEEEEcCCCCEEEEEECCC-----------ceEeeEEeCCCC-CCCcceeeeecC-CCcEEEEecccccccCCCCc
Confidence            38888777665 55699999973           34444  44321 2356777643 4 477777774           


Q ss_pred             -------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---------------eEEEE----
Q psy2762          88 -------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---------------TISFL----  141 (318)
Q Consensus        88 -------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---------------~i~i~----  141 (318)
                             +++.+.+.|.++.+...+....+   ....++++|+  +.++.+.+.+.               .|.+.    
T Consensus       166 ~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spd--Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~  240 (595)
T 1fwx_A          166 NMEDVANYVNVFTAVDADKWEVAWQVLVSG---NLDNCDADYE--GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAE  240 (595)
T ss_dssp             STTCGGGEEEEEEEEETTTTEEEEEEEESS---CCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHH
T ss_pred             ccccccccCceEEEEECCCCeEEEEEEeCC---CccceEECCC--CCEEEEEecCcccCcchhhccccccceEEEeeccc
Confidence                   35689999998765433333322   3455778998  55555555442               23332    


Q ss_pred             -------------------EeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762         142 -------------------TYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       142 -------------------~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                                         |........-...+.. ......+.++|+.                -..++++..+.+|.+
T Consensus       241 ~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDG----------------k~v~V~~~~s~~VsV  303 (595)
T 1fwx_A          241 IEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDK----------------KHLCVAGKLSPTVTV  303 (595)
T ss_dssp             HHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTS----------------SEEEEECTTSSBEEE
T ss_pred             eeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCC----------------CEEEEeCCCCCeEEE
Confidence                               2211000000001110 0112345566652                135677778889999


Q ss_pred             EEccCCeE----------EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc--------ceeeEEe
Q psy2762         203 WKQEGDKW----------IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--------TWTPFIM  264 (318)
Q Consensus       203 wd~~~~~~----------~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~--------~~~~~~~  264 (318)
                      +|+.+.+.          ....+.+- ....+.+.|+|+    |...++.-.|.+|-+|+.....        ......+
T Consensus       304 id~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~d----G~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~ki  378 (595)
T 1fwx_A          304 LDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGR----GNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKL  378 (595)
T ss_dssp             EEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTT----SEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEE
T ss_pred             EECcccccccccccCcccceEEEcCC-CCCcceEEECCC----CeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEe
Confidence            99875310          01122221 233678999996    6566777789999999986511        1122233


Q ss_pred             eecCCcE-----EEEEEcCCCCEEEEEeC---CCe----------EEEEEECCCCceEEEeeeccccccc
Q psy2762         265 NTFDDVV-----WNVSWSLTGDILTVSCG---DNS----------VSLWKENTDGAWQCITEMGKTSEQR  316 (318)
Q Consensus       265 ~~~~~~v-----~~v~~spdg~~l~s~~~---D~~----------v~iW~~~~~~~~~~~~~~~~~~~~~  316 (318)
                      ..+-++-     ...+++|||++|.++..   |+-          -++.|+ .+++...+...--..||+
T Consensus       379 dV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~di-s~~~m~lv~d~p~~~ePh  447 (595)
T 1fwx_A          379 DVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDI-SGDKMVLVHDGPTFAEPH  447 (595)
T ss_dssp             ECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEEC-SSSSCEEEEEEEESSCCC
T ss_pred             ecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEc-CCCcEEEEEEEcCCCCCC
Confidence            3332221     22356899999999864   432          288998 566777666655444443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.23  E-value=0.0019  Score=55.65  Aligned_cols=232  Identities=13%  Similarity=-0.001  Sum_probs=124.5

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-C-e
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-R-K   91 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g-~   91 (318)
                      .....++++++|+++++-..++.|..||.+.            .....+. -.+....+++.+  +++++++.... + .
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g------------~~~~~~~-~~~~p~gia~~~--dG~l~vad~~~~~~~   96 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG------------NQQIHAT-VEGKVSGLAFTS--NGDLVATGWNADSIP   96 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC------------CEEEEEE-CSSEEEEEEECT--TSCEEEEEECTTSCE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC------------ceEEEEe-CCCCceeEEEcC--CCcEEEEeccCCcce
Confidence            4567899999999888877889998888652            2222222 234578888863  47765554332 2 3


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc---------ccccc
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA---------HTIGC  162 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~---------h~~~v  162 (318)
                      |..++..+++......+.. ......++..+.  +.++++-..++.|..+|.....  ..+.....         .....
T Consensus        97 v~~~d~~~g~~~~~~~~~~-~~~~~g~~~~~~--~~~~v~d~~~g~i~~~d~~~~~--~~v~~~~~~~~~~~~~~~~~~p  171 (306)
T 2p4o_A           97 VVSLVKSDGTVETLLTLPD-AIFLNGITPLSD--TQYLTADSYRGAIWLIDVVQPS--GSIWLEHPMLARSNSESVFPAA  171 (306)
T ss_dssp             EEEEECTTSCEEEEEECTT-CSCEEEEEESSS--SEEEEEETTTTEEEEEETTTTE--EEEEEECGGGSCSSTTCCSCSE
T ss_pred             EEEEcCCCCeEEEEEeCCC-ccccCcccccCC--CcEEEEECCCCeEEEEeCCCCc--EeEEEECCccccccccCCCCcC
Confidence            5566666665444333321 223345554443  4455554457766665532110  01110000         00001


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEEEcccCCCCeeEEEEccCCCCCccEEEE
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS  241 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s  241 (318)
                      +.+  +|+.                ...+++-+..+.|.+++.+. +.......+.. ......++++++    |.++++
T Consensus       172 ngi--s~dg----------------~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~d----G~l~va  228 (306)
T 2p4o_A          172 NGL--KRFG----------------NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVE----GNLYGA  228 (306)
T ss_dssp             EEE--EEET----------------TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTT----CCEEEE
T ss_pred             CCc--CcCC----------------CEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCC----CCEEEE
Confidence            111  2221                23456666778899999764 22110111110 123567888886    677777


Q ss_pred             EeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc---CCCCEEEEEeCC
Q psy2762         242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS---LTGDILTVSCGD  289 (318)
Q Consensus       242 ~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s---pdg~~l~s~~~D  289 (318)
                      ....+.|.+++...... .............+++|.   ||++.|..+...
T Consensus       229 ~~~~~~V~~~~~~G~~~-~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          229 THIYNSVVRIAPDRSTT-IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             CBTTCCEEEECTTCCEE-EEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             eCCCCeEEEECCCCCEE-EEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence            66778899998753210 011111112468899999   898777666543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.23  E-value=0.00034  Score=58.92  Aligned_cols=196  Identities=11%  Similarity=0.079  Sum_probs=117.1

Q ss_pred             eEEEEecccccC--eEEEEecCCCCCcEEEEEECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEe
Q psy2762          57 TLIAELKGHSGP--VWQVAWAHPQFGTLLASCSYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACG  132 (318)
Q Consensus        57 ~~~~~~~~h~~~--V~~v~~~~~~~~~~las~s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasg  132 (318)
                      +++.++. |...  ...+.|+   ++.++.|.+.+|  .|++.|+.+++......+.. ......+++..   +.+.+..
T Consensus        32 ~vv~~~p-hd~~~ftqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g---~~ly~lt  103 (262)
T 3nol_A           32 QIVHSYP-HDTKAFTEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWK---DKIVGLT  103 (262)
T ss_dssp             EEEEEEE-CCTTCEEEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEET---TEEEEEE
T ss_pred             EEEEEec-CCCCcccceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeC---CEEEEEE
Confidence            3566663 4433  4678885   368888888877  99999999998666555432 11223344443   3566666


Q ss_pred             ecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762         133 SSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       133 s~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~  212 (318)
                      ..++.+.++|....+   .+..+.- ...-..++  ++                 +..|+.+..++.|+++|..+.+...
T Consensus       104 w~~~~v~v~D~~t~~---~~~ti~~-~~eG~glt--~d-----------------g~~L~~SdGs~~i~~iDp~T~~v~~  160 (262)
T 3nol_A          104 WKNGLGFVWNIRNLR---QVRSFNY-DGEGWGLT--HN-----------------DQYLIMSDGTPVLRFLDPESLTPVR  160 (262)
T ss_dssp             SSSSEEEEEETTTCC---EEEEEEC-SSCCCCEE--EC-----------------SSCEEECCSSSEEEEECTTTCSEEE
T ss_pred             eeCCEEEEEECccCc---EEEEEEC-CCCceEEe--cC-----------------CCEEEEECCCCeEEEEcCCCCeEEE
Confidence            678888898864332   1222221 11111222  22                 2345555557889999988765444


Q ss_pred             EEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee----------ecCCcEEEEEEcCC
Q psy2762         213 ETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN----------TFDDVVWNVSWSLT  279 (318)
Q Consensus       213 ~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~----------~~~~~v~~v~~spd  279 (318)
                      ........   ..++.+.|. +    |...+..-.+..|.+.|..+........+.          ...+..+.+||+|+
T Consensus       161 ~I~V~~~g~~~~~lNELe~~-~----G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~  235 (262)
T 3nol_A          161 TITVTAHGEELPELNELEWV-D----GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE  235 (262)
T ss_dssp             EEECEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred             EEEeccCCccccccceeEEE-C----CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence            33332222   335667776 2    667776667888999998775421111111          11246799999999


Q ss_pred             CCEEEEEeC
Q psy2762         280 GDILTVSCG  288 (318)
Q Consensus       280 g~~l~s~~~  288 (318)
                      ++.|..+|.
T Consensus       236 ~~~lfVTGK  244 (262)
T 3nol_A          236 HHRLFVTGK  244 (262)
T ss_dssp             TTEEEEEET
T ss_pred             CCEEEEECC
Confidence            988888875

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.21  E-value=0.0019  Score=54.72  Aligned_cols=210  Identities=10%  Similarity=0.022  Sum_probs=124.1

Q ss_pred             ceEEEEeccccc--CeEEEEecCCCCCcEEEEEEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762          56 GTLIAELKGHSG--PVWQVAWAHPQFGTLLASCSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC  131 (318)
Q Consensus        56 ~~~~~~~~~h~~--~V~~v~~~~~~~~~~las~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~las  131 (318)
                      .+++.++. |..  ....+.|++  ++.++++.+.  ++.|.+.|+.+++......+..+ .....+++..   +.+.++
T Consensus         9 ~~vv~~~p-~~~~~f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g---~~lyv~   81 (266)
T 2iwa_A            9 VEVLNEFP-HDPYAFTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLN---EKLYQV   81 (266)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEET---TEEEEE
T ss_pred             ceEEEEEE-CCCCCCcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeC---CEEEEE
Confidence            35666764 443  357899963  3666666553  58999999999886665544332 2233556653   356677


Q ss_pred             eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      ...++.+.++|.....   .+..+.....  .....+++                 ++.++.+..+++|.++|..+.+..
T Consensus        82 t~~~~~v~viD~~t~~---v~~~i~~g~~--~g~glt~D-----------------g~~l~vs~gs~~l~viD~~t~~v~  139 (266)
T 2iwa_A           82 VWLKNIGFIYDRRTLS---NIKNFTHQMK--DGWGLATD-----------------GKILYGSDGTSILYEIDPHTFKLI  139 (266)
T ss_dssp             ETTCSEEEEEETTTTE---EEEEEECCSS--SCCEEEEC-----------------SSSEEEECSSSEEEEECTTTCCEE
T ss_pred             EecCCEEEEEECCCCc---EEEEEECCCC--CeEEEEEC-----------------CCEEEEECCCCeEEEEECCCCcEE
Confidence            7788899998863221   1222221101  11222232                 233444456889999999886544


Q ss_pred             EEEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec-----------CCcEEEEEEc
Q psy2762         212 EETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF-----------DDVVWNVSWS  277 (318)
Q Consensus       212 ~~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~-----------~~~v~~v~~s  277 (318)
                      .......+.   ..++.+.|. +    +...+....+..|.+-|..+........+.+.           ....+.++|+
T Consensus       140 ~~I~Vg~~~~p~~~~nele~~-d----g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~  214 (266)
T 2iwa_A          140 KKHNVKYNGHRVIRLNELEYI-N----GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD  214 (266)
T ss_dssp             EEEECEETTEECCCEEEEEEE-T----TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred             EEEEECCCCcccccceeEEEE-C----CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence            333332221   236778887 3    66667776788999999987542111111111           1357899999


Q ss_pred             CCCCEEEEEe-CCCeEEEEEECC
Q psy2762         278 LTGDILTVSC-GDNSVSLWKENT  299 (318)
Q Consensus       278 pdg~~l~s~~-~D~~v~iW~~~~  299 (318)
                      |+++.|..++ ..+.|..-++..
T Consensus       215 ~~~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          215 QENKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             TTTTEEEEEETTCSEEEEEEEEE
T ss_pred             CCCCEEEEECCCCCeEEEEEEec
Confidence            9987766665 566776666544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.19  E-value=0.0004  Score=58.50  Aligned_cols=183  Identities=13%  Similarity=0.156  Sum_probs=108.4

Q ss_pred             cceeeeeeecCCCCEEEEeeCCC--cEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEE-EC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDH--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASC-SY   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~-s~   88 (318)
                      ......+.|+ ++.+..|.|.+|  .|+++|++           +++++..+...... ...+...    ++.|... -.
T Consensus        42 ~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-----------Tgkv~~~~~l~~~~FgeGit~~----g~~ly~ltw~  105 (262)
T 3nol_A           42 KAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-----------SGKTLQQIELGKRYFGEGISDW----KDKIVGLTWK  105 (262)
T ss_dssp             TCEEEEEEEE-TTEEEEEEEETTEEEEEEECTT-----------TCCEEEEEECCTTCCEEEEEEE----TTEEEEEESS
T ss_pred             CcccceEEEE-CCEEEEECCCCCCceEEEEECC-----------CCcEEEEEecCCccceeEEEEe----CCEEEEEEee
Confidence            3455778888 778888888876  89999986           45666666543322 1234442    3344444 45


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---cc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CN  163 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~  163 (318)
                      ++.+.++|..+.+.+..+...+.     ...+++++ ..++ ....++.|.++|.....   ....+.  ....+   ++
T Consensus       106 ~~~v~v~D~~t~~~~~ti~~~~e-----G~glt~dg-~~L~-~SdGs~~i~~iDp~T~~---v~~~I~V~~~g~~~~~lN  175 (262)
T 3nol_A          106 NGLGFVWNIRNLRQVRSFNYDGE-----GWGLTHND-QYLI-MSDGTPVLRFLDPESLT---PVRTITVTAHGEELPELN  175 (262)
T ss_dssp             SSEEEEEETTTCCEEEEEECSSC-----CCCEEECS-SCEE-ECCSSSEEEEECTTTCS---EEEEEECEETTEECCCEE
T ss_pred             CCEEEEEECccCcEEEEEECCCC-----ceEEecCC-CEEE-EECCCCeEEEEcCCCCe---EEEEEEeccCCccccccc
Confidence            88999999988876665554331     12334553 3344 44446778887753322   122222  11112   23


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC----------CCCeeEEEEccCCC
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH----------SDWVRDVAWAPSWG  233 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h----------~~~V~~v~~sp~~~  233 (318)
                      .+.|..                  +..+|..-.++.|.+.|.++++......+.+-          .+..+.|+|+|+  
T Consensus       176 ELe~~~------------------G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~--  235 (262)
T 3nol_A          176 ELEWVD------------------GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE--  235 (262)
T ss_dssp             EEEEET------------------TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT--
T ss_pred             eeEEEC------------------CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC--
Confidence            455542                  34556666778999999999876555554321          134589999997  


Q ss_pred             CCccEEEEE
Q psy2762         234 LSKCMIASC  242 (318)
Q Consensus       234 ~~~~~l~s~  242 (318)
                       ...++++|
T Consensus       236 -~~~lfVTG  243 (262)
T 3nol_A          236 -HHRLFVTG  243 (262)
T ss_dssp             -TTEEEEEE
T ss_pred             -CCEEEEEC
Confidence             35566655

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.10  E-value=0.0007  Score=57.07  Aligned_cols=195  Identities=8%  Similarity=0.022  Sum_probs=117.0

Q ss_pred             eEEEEecccc--cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          57 TLIAELKGHS--GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        57 ~~~~~~~~h~--~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +++.++ -|.  .....+.|.   .+.++.|.+.+|.|++.|+++++..... +.. ......+++..   +.+.+....
T Consensus        44 ~Vv~~~-phd~~~ftqGL~~~---~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g---~~Ly~ltw~  114 (268)
T 3nok_A           44 HIIREY-PHATNAFTQGLVFH---QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG---ERLYQLTWT  114 (268)
T ss_dssp             EEEEEE-ECCTTCCEEEEEEE---TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS---SCEEEEESS
T ss_pred             EEEEEE-cCCCccccceEEEE---CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC---CEEEEEEcc
Confidence            455666 343  334688885   3688889999999999999998765544 442 21223355543   355666677


Q ss_pred             CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE
Q psy2762         135 DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       135 d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~  214 (318)
                      ++.+.++|....+   .+..+.. ...-..++  ++                 ++.|+.+..++.|+++|..+.+.....
T Consensus       115 ~~~v~V~D~~Tl~---~~~ti~~-~~eGwGLt--~D-----------------g~~L~vSdGs~~l~~iDp~T~~v~~~I  171 (268)
T 3nok_A          115 EGLLFTWSGMPPQ---RERTTRY-SGEGWGLC--YW-----------------NGKLVRSDGGTMLTFHEPDGFALVGAV  171 (268)
T ss_dssp             SCEEEEEETTTTE---EEEEEEC-SSCCCCEE--EE-----------------TTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEECCcCc---EEEEEeC-CCceeEEe--cC-----------------CCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence            8889898863322   1122211 11111222  11                 244555556889999998887654444


Q ss_pred             EcccCCC---CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEcCCC
Q psy2762         215 KLENHSD---WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWSLTG  280 (318)
Q Consensus       215 ~~~~h~~---~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~spdg  280 (318)
                      ....+..   .++.+.|..     |...+..-.+..|.+-|..+........+.           ...+..+.+||+|++
T Consensus       172 ~V~~~g~~v~~lNeLe~~d-----G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~  246 (268)
T 3nok_A          172 QVKLRGQPVELINELECAN-----GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS  246 (268)
T ss_dssp             ECEETTEECCCEEEEEEET-----TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred             EeCCCCcccccccccEEeC-----CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence            3333322   356778873     667776667889999998775421111111           112468999999988


Q ss_pred             CEEEEEeC
Q psy2762         281 DILTVSCG  288 (318)
Q Consensus       281 ~~l~s~~~  288 (318)
                      +.|..++.
T Consensus       247 ~rlfVTGK  254 (268)
T 3nok_A          247 GRIFMTGK  254 (268)
T ss_dssp             CCEEEEET
T ss_pred             CEEEEeCC
Confidence            77776663

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.09  E-value=0.0015  Score=63.23  Aligned_cols=109  Identities=16%  Similarity=0.157  Sum_probs=58.9

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +..|+.++.++.|..+|..+           |+.+=.+..+..          .+ ..+..    .+..++.++.|+.|.
T Consensus        70 ~g~vyv~~~~~~v~AlD~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~v~v~~~dg~l~  134 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARD-----------GRLIWKYDPQSDRHRAGEACCDAVNRGVAV----WKGKVYVGVLDGRLE  134 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTT-----------CCEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETTEEEEECTTSEEE
T ss_pred             CCEEEEEcCCCeEEEEECCC-----------CceeEEEcCCCCccccccccccCCCCccEE----ECCEEEEEccCCEEE
Confidence            55677778889999999863           444433332211          11 11222    246788889999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeC---CCCCcEEEEee-----cCCeEEEEEeecCCCCc
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAP---KEFGLILACGS-----SDGTISFLTYMSDTNSW  150 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~~~lasgs-----~d~~i~i~~~~~~~~~~  150 (318)
                      .+|..+++..=.+....+......+..+|   +  +.+++..+     .++.|..+|..+++..|
T Consensus       135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~--g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  197 (689)
T 1yiq_A          135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVN--GKVVIGNGGAEFGVRGYVTAYDAETGKEAW  197 (689)
T ss_dssp             EEETTTCCEEEEEECCSCTTSCCBCCSCCEEET--TEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             EEECCCCCEeeeecCcCCCCCCccccCCcEEEC--CEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence            99999887432222210111111111122   2  34443322     36788888876655433

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.08  E-value=0.00089  Score=57.83  Aligned_cols=217  Identities=14%  Similarity=0.053  Sum_probs=117.7

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFK  104 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~  104 (318)
                      +..|..++.++.|..+|..            ++.......+...+.++...  .++. |..++.++.+..+|.. +....
T Consensus       107 ~~~l~v~t~~~~l~~~d~~------------g~~~~~~~~~~~~~~~~~~~--~~g~-l~vgt~~~~l~~~d~~-g~~~~  170 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTD------------GTEKWRFKTKKAIYATPIVS--EDGT-IYVGSNDNYLYAINPD-GTEKW  170 (330)
T ss_dssp             TTEEEEECTTSEEEEECTT------------SCEEEEEECSSCCCSCCEEC--TTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred             CCEEEEEecCCEEEEEcCC------------CCEEEEEcCCCceeeeeEEc--CCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence            3345556667777777754            22333333344444455443  2344 6667788999999988 55333


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      .  +......+.++...++  +.+.+. +  +.|..++ ....   ...........+.++...++              
T Consensus       171 ~--~~~~~~~~~~~~~d~~--g~l~v~-t--~~l~~~d-~~g~---~~~~~~~~~~~~~~~~~~~~--------------  225 (330)
T 3hxj_A          171 R--FKTNDAITSAASIGKD--GTIYFG-S--DKVYAIN-PDGT---EKWNFYAGYWTVTRPAISED--------------  225 (330)
T ss_dssp             E--EECSSCCCSCCEECTT--CCEEEE-S--SSEEEEC-TTSC---EEEEECCSSCCCSCCEECTT--------------
T ss_pred             E--EecCCCceeeeEEcCC--CEEEEE-e--CEEEEEC-CCCc---EEEEEccCCcceeceEECCC--------------
Confidence            3  3333445666666555  444443 3  5666665 2222   11111122223444444432              


Q ss_pred             CCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEe
Q psy2762         185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM  264 (318)
Q Consensus       185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~  264 (318)
                         + .|..++.++.|..+|...... .  .+......+..+...++    + .|..++.++.|..++......+   ..
T Consensus       226 ---g-~l~v~t~~~gl~~~~~~g~~~-~--~~~~~~~~~~~~~~~~~----g-~l~v~t~~ggl~~~d~~g~~~~---~~  290 (330)
T 3hxj_A          226 ---G-TIYVTSLDGHLYAINPDGTEK-W--RFKTGKRIESSPVIGNT----D-TIYFGSYDGHLYAINPDGTEKW---NF  290 (330)
T ss_dssp             ---S-CEEEEETTTEEEEECTTSCEE-E--EEECSSCCCSCCEECTT----S-CEEEECTTCEEEEECTTSCEEE---EE
T ss_pred             ---C-eEEEEcCCCeEEEECCCCCEe-E--EeeCCCCccccceEcCC----C-eEEEecCCCCEEEECCCCcEEE---EE
Confidence               2 466677788888888644332 2  22223333344555442    3 4667778888999986432222   11


Q ss_pred             eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       265 ~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ......+.++...++|++. .++.+|.+++....
T Consensus       291 ~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~  323 (330)
T 3hxj_A          291 ETGSWIIATPVIDENGTIY-FGTRNGKFYALFNL  323 (330)
T ss_dssp             ECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC-
T ss_pred             EcCCccccceEEcCCCEEE-EEcCCCeEEEEecc
Confidence            1123456677777888755 57788998887643

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.08  E-value=0.0011  Score=58.75  Aligned_cols=228  Identities=14%  Similarity=0.080  Sum_probs=120.9

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWF  103 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~  103 (318)
                      ++..++.++.|+.|..+|..+           ++.+-..............    .+..++.++.++.|..+|..+++..
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~t-----------G~~~W~~~~~~~~~~~p~~----~~~~v~v~~~~g~l~~~d~~tG~~~  166 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSD-----------GTVAWQTKVAGEALSRPVV----SDGLVLIHTSNGQLQALNEADGAVK  166 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTT-----------CCEEEEEECSSCCCSCCEE----ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             eCCEEEEEcCCCEEEEEECCC-----------CCEEEEEeCCCceEcCCEE----ECCEEEEEcCCCeEEEEECCCCcEE
Confidence            455677788899999999862           4444333322211111122    1457788889999999999888643


Q ss_pred             EEEEecCCCc---CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccc-----ccceeeeCCCCCCCc
Q psy2762         104 KYYEYNNHDS---SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-----GCNAVSWGPGIGSLS  175 (318)
Q Consensus       104 ~~~~~~~h~~---~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~  175 (318)
                      -.........   ........ +  + .+..++.++.|..+|...+...|... ......     .+..+.-.|.     
T Consensus       167 W~~~~~~~~~~~~~~~~~~~~-~--~-~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~-----  236 (376)
T 3q7m_A          167 WTVNLDMPSLSLRGESAPTTA-F--G-AAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPV-----  236 (376)
T ss_dssp             EEEECCC-----CCCCCCEEE-T--T-EEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCE-----
T ss_pred             EEEeCCCCceeecCCCCcEEE-C--C-EEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcE-----
Confidence            2222211100   00111222 2  2 46667788888888765443222211 000000     0000111110     


Q ss_pred             cccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         176 ELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       176 ~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                               -. +..+..++.++.|..+|..+++..-....    .....+...      +..|..++.++.|..+|..+
T Consensus       237 ---------~~-~~~v~~~~~~g~l~~~d~~tG~~~w~~~~----~~~~~~~~~------~~~l~~~~~~g~l~~~d~~t  296 (376)
T 3q7m_A          237 ---------VV-NGVVFALAYNGNLTALDLRSGQIMWKREL----GSVNDFIVD------GNRIYLVDQNDRVMALTIDG  296 (376)
T ss_dssp             ---------EE-TTEEEEECTTSCEEEEETTTCCEEEEECC----CCEEEEEEE------TTEEEEEETTCCEEEEETTT
T ss_pred             ---------EE-CCEEEEEecCcEEEEEECCCCcEEeeccC----CCCCCceEE------CCEEEEEcCCCeEEEEECCC
Confidence                     00 23577788899999999988764322221    123333332      34677788899999999876


Q ss_pred             Ccc-eeeEEeeecC-CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         256 YVT-WTPFIMNTFD-DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       256 ~~~-~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ... |.   ..... ..+.+...  .+..|..++.+|.|.++|..++.
T Consensus       297 G~~~w~---~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          297 GVTLWT---QSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR  339 (376)
T ss_dssp             CCEEEE---ECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred             CcEEEe---ecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence            541 21   11011 11111222  24577788889999999977654

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.06  E-value=0.0038  Score=52.44  Aligned_cols=239  Identities=11%  Similarity=-0.010  Sum_probs=128.2

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~  105 (318)
                      .+|+.+.. +.|+.++++....      ........+........+++|.+ ..+.++++-...+.|..+++........
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~------~~~~~~~~~~~~~~~~~gi~~d~-~~~~ly~~d~~~~~I~~~~~~g~~~~~~   73 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTM------KKTEAKAFLHIPAKVIIGLAFDC-VDKVVYWTDISEPSIGRASLHGGEPTTI   73 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCB------CGGGCEEEEEEEEEEEEEEEEET-TTTEEEEEETTTTEEEEEESSSCCCEEE
T ss_pred             cEEEEEcC-CeEEEEEecCccc------ccccceeeecCCCCcEEEEEEec-CCCEEEEEECCCCEEEEEecCCCCcEEE
Confidence            34444443 4788888863210      00000111222234567889864 2355555655678999999876542222


Q ss_pred             EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCC
Q psy2762         106 YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       106 ~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                        +...-.....+++.|+. +.++++-...+.|.+++... ..   ...+. ........++++|+.             
T Consensus        74 --~~~~~~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g-~~---~~~~~~~~~~~P~~i~vd~~~-------------  133 (267)
T 1npe_A           74 --IRQDLGSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDG-TQ---RRVLFDTGLVNPRGIVTDPVR-------------  133 (267)
T ss_dssp             --ECTTCCCEEEEEEETTT-TEEEEEETTTTEEEEEETTS-CS---CEEEECSSCSSEEEEEEETTT-------------
T ss_pred             --EECCCCCccEEEEEecC-CeEEEEECCCCEEEEEEcCC-CC---EEEEEECCCCCccEEEEeeCC-------------
Confidence              22222467899999863 45666666677888777521 11   11111 111234567777742             


Q ss_pred             CCccceEEEecC--CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE
Q psy2762         185 GGVAKRLVSGGC--DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF  262 (318)
Q Consensus       185 ~~~~~~lasgs~--d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~  262 (318)
                         +..+++...  .+.|..++++........  .......+.++++|+   .+.+.++-...+.|.+++..+...  ..
T Consensus       134 ---g~lyv~~~~~~~~~I~~~~~dg~~~~~~~--~~~~~~P~gia~d~~---~~~lyv~d~~~~~I~~~~~~g~~~--~~  203 (267)
T 1npe_A          134 ---GNLYWTDWNRDNPKIETSHMDGTNRRILA--QDNLGLPNGLTFDAF---SSQLCWVDAGTHRAECLNPAQPGR--RK  203 (267)
T ss_dssp             ---TEEEEEECCSSSCEEEEEETTSCCCEEEE--CTTCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTEEEE--EE
T ss_pred             ---CEEEEEECCCCCcEEEEEecCCCCcEEEE--ECCCCCCcEEEEcCC---CCEEEEEECCCCEEEEEecCCCce--EE
Confidence               222333322  467888887654321111  122245789999996   345556666678899999865321  11


Q ss_pred             EeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEE
Q psy2762         263 IMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       263 ~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~  305 (318)
                      ..... .....++..  +..|..+. ..+.|..++...+...+.
T Consensus       204 ~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~  244 (267)
T 1npe_A          204 VLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDT  244 (267)
T ss_dssp             EEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEE
Confidence            12222 234566654  44555454 567888888655433333

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.05  E-value=0.0055  Score=54.15  Aligned_cols=229  Identities=13%  Similarity=0.114  Sum_probs=121.9

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccc---------ccCeE-EEEecCCCCCcEEEEEECCCeEE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH---------SGPVW-QVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h---------~~~V~-~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .+..++.++.++.|..+|.++           ++.+-.....         ...+. .+..    ++..++.++.|+.|.
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~~g~l~  116 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADD-----------GKEIWSVSLAEKDGWFSKEPALLSGGVTV----SGGHVYIGSEKAQVY  116 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTT-----------CCEEEEEECCC---CCSCCCCCEEEEEEE----ETTEEEEEETTSEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccC-----------CceeeeecCccccccccccCcccccCceE----eCCEEEEEcCCCEEE
Confidence            456777788899999999863           3333222221         12222 2222    256778888999999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee--eeCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV--SWGPGI  171 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~  171 (318)
                      .+|..+++..  ++.............. +  + .+..++.++.|..+|...++..|..   .. ..++...  ...|. 
T Consensus       117 a~d~~tG~~~--W~~~~~~~~~~~p~~~-~--~-~v~v~~~~g~l~~~d~~tG~~~W~~---~~-~~~~~~~~~~~~~~-  185 (376)
T 3q7m_A          117 ALNTSDGTVA--WQTKVAGEALSRPVVS-D--G-LVLIHTSNGQLQALNEADGAVKWTV---NL-DMPSLSLRGESAPT-  185 (376)
T ss_dssp             EEETTTCCEE--EEEECSSCCCSCCEEE-T--T-EEEEECTTSEEEEEETTTCCEEEEE---EC-CC-----CCCCCCE-
T ss_pred             EEECCCCCEE--EEEeCCCceEcCCEEE-C--C-EEEEEcCCCeEEEEECCCCcEEEEE---eC-CCCceeecCCCCcE-
Confidence            9999888743  3333222211111222 2  2 4666778888888886544422221   11 1111000  00010 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCC-----CeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSD-----WVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~-----~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                                   -. +..++.++.++.|..+|..+++..-.........     .+..+.-.|-.  .+..+..++.++
T Consensus       186 -------------~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g  249 (376)
T 3q7m_A          186 -------------TA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNG  249 (376)
T ss_dssp             -------------EE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTS
T ss_pred             -------------EE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCc
Confidence                         00 1357788889999999988776432222221100     00001111110  134567777899


Q ss_pred             eEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         247 KVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       247 ~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      .+..+|..+.. .|..    . ......+..  ++..|..++.++.|..+|..++.
T Consensus       250 ~l~~~d~~tG~~~w~~----~-~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~  298 (376)
T 3q7m_A          250 NLTALDLRSGQIMWKR----E-LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV  298 (376)
T ss_dssp             CEEEEETTTCCEEEEE----C-CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred             EEEEEECCCCcEEeec----c-CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence            99999987643 1211    1 122333333  45677778888999999977654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=97.99  E-value=0.0013  Score=55.49  Aligned_cols=182  Identities=8%  Similarity=0.005  Sum_probs=107.6

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe--EEEEecCCCCCcEEEEEECCC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV--WQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~~~~~~~~las~s~Dg   90 (318)
                      ......+.|+ ++.+.++.+.+|.|+++|+++           ++++..+ .. ...  ..+.+.   .+.+....-.++
T Consensus        54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~T-----------gkv~~~~-l~-~~~FgeGit~~---g~~Ly~ltw~~~  116 (268)
T 3nok_A           54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLES-----------AQPVWME-RL-GNIFAEGLASD---GERLYQLTWTEG  116 (268)
T ss_dssp             TCCEEEEEEE-TTEEEEEETTTTEEEECCSSC-----------SSCSEEE-EC-TTCCEEEEEEC---SSCEEEEESSSC
T ss_pred             ccccceEEEE-CCEEEEEcCCCCEEEEEECCC-----------CcEEeEE-CC-CCcceeEEEEe---CCEEEEEEccCC
Confidence            3445678886 467788888999999999873           3444444 11 222  235542   234555555689


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---ccee
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNAV  165 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~~  165 (318)
                      .+.++|..+.+.+..+...+.   -..++  ++  +..|..+..++.|.++|....+   ....+.  .+..+   ++.+
T Consensus       117 ~v~V~D~~Tl~~~~ti~~~~e---GwGLt--~D--g~~L~vSdGs~~l~~iDp~T~~---v~~~I~V~~~g~~v~~lNeL  186 (268)
T 3nok_A          117 LLFTWSGMPPQRERTTRYSGE---GWGLC--YW--NGKLVRSDGGTMLTFHEPDGFA---LVGAVQVKLRGQPVELINEL  186 (268)
T ss_dssp             EEEEEETTTTEEEEEEECSSC---CCCEE--EE--TTEEEEECSSSEEEEECTTTCC---EEEEEECEETTEECCCEEEE
T ss_pred             EEEEEECCcCcEEEEEeCCCc---eeEEe--cC--CCEEEEECCCCEEEEEcCCCCe---EEEEEEeCCCCccccccccc
Confidence            999999998876655554322   23343  44  3334444557888888754332   122222  22222   2344


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-----------CCCCeeEEEEccCCCC
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-----------HSDWVRDVAWAPSWGL  234 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-----------h~~~V~~v~~sp~~~~  234 (318)
                      .|..                  +..+|..-.++.|.+.|.++++......+.+           -.+..+.|+|+|+   
T Consensus       187 e~~d------------------G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~---  245 (268)
T 3nok_A          187 ECAN------------------GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG---  245 (268)
T ss_dssp             EEET------------------TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT---
T ss_pred             EEeC------------------CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC---
Confidence            4442                  3455666667899999999887655554431           1235689999997   


Q ss_pred             CccEEEEE
Q psy2762         235 SKCMIASC  242 (318)
Q Consensus       235 ~~~~l~s~  242 (318)
                      ..++++||
T Consensus       246 ~~rlfVTG  253 (268)
T 3nok_A          246 SGRIFMTG  253 (268)
T ss_dssp             TCCEEEEE
T ss_pred             CCEEEEeC
Confidence            35677766

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.98  E-value=0.0036  Score=52.10  Aligned_cols=197  Identities=11%  Similarity=0.030  Sum_probs=117.3

Q ss_pred             ceEEEEecccc--cCeEEEEecCCCCCcEEEEEECCC--eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEE
Q psy2762          56 GTLIAELKGHS--GPVWQVAWAHPQFGTLLASCSYDR--KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC  131 (318)
Q Consensus        56 ~~~~~~~~~h~--~~V~~v~~~~~~~~~~las~s~Dg--~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~las  131 (318)
                      .+++.++ -|.  .....+.|. +  +.++.|.+.+|  .|++.|+.+++......+..+. .-..+++..   +++...
T Consensus         9 ~~v~~~~-phd~~~ftqGL~~~-~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~---~~ly~l   80 (243)
T 3mbr_X            9 YRVVKRY-PHDTTAFTEGLFYL-R--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWR---DRLIQL   80 (243)
T ss_dssp             EEEEEEE-ECCTTCCEEEEEEE-T--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEET---TEEEEE
T ss_pred             eEEEEEc-CCCCccccccEEEE-C--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeC---CEEEEE
Confidence            3456666 465  336689985 2  67778877764  9999999999876655554321 223344443   456666


Q ss_pred             eecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       132 gs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                      ...++.+.++|....+   .+..+. ....-..++  ++                 +..|..+..++.|.++|..+.+..
T Consensus        81 tw~~~~v~v~D~~tl~---~~~ti~-~~~~Gwglt--~d-----------------g~~L~vSdgs~~l~~iDp~t~~~~  137 (243)
T 3mbr_X           81 TWRNHEGFVYDLATLT---PRARFR-YPGEGWALT--SD-----------------DSHLYMSDGTAVIRKLDPDTLQQV  137 (243)
T ss_dssp             ESSSSEEEEEETTTTE---EEEEEE-CSSCCCEEE--EC-----------------SSCEEEECSSSEEEEECTTTCCEE
T ss_pred             EeeCCEEEEEECCcCc---EEEEEe-CCCCceEEe--eC-----------------CCEEEEECCCCeEEEEeCCCCeEE
Confidence            7778899898863322   112222 111112222  22                 234444555889999998887544


Q ss_pred             EEEEcccCC---CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-----------ecCCcEEEEEEc
Q psy2762         212 EETKLENHS---DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-----------TFDDVVWNVSWS  277 (318)
Q Consensus       212 ~~~~~~~h~---~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-----------~~~~~v~~v~~s  277 (318)
                      .......+.   ..++.+.|..     |...+..-.+..|.+-|..+........+.           ...+..+.+||+
T Consensus       138 ~~I~V~~~g~~~~~lNeLe~~~-----G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d  212 (243)
T 3mbr_X          138 GSIKVTAGGRPLDNLNELEWVN-----GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD  212 (243)
T ss_dssp             EEEECEETTEECCCEEEEEEET-----TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred             EEEEEccCCcccccceeeEEeC-----CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence            443333222   2356777763     666766666788999988775421111111           112467999999


Q ss_pred             CCCCEEEEEeC
Q psy2762         278 LTGDILTVSCG  288 (318)
Q Consensus       278 pdg~~l~s~~~  288 (318)
                      |+++.|..++.
T Consensus       213 ~~~~~lfVTGK  223 (243)
T 3mbr_X          213 AEHDRLFVTGK  223 (243)
T ss_dssp             TTTTEEEEEET
T ss_pred             CCCCEEEEECC
Confidence            99888777764

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.98  E-value=0.0017  Score=62.77  Aligned_cols=104  Identities=14%  Similarity=0.131  Sum_probs=58.1

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +..|+.++.++.|.-+|..           +|+.+=.+.....          .+ ..+.+    .+..++.++.|+.+.
T Consensus        77 ~g~vyv~~~~~~v~AlD~~-----------tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~----~~~~v~v~~~dg~l~  141 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTR-----------TGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL----WKGKVYVGAWDGRLI  141 (677)
T ss_dssp             TTEEEEECGGGCEEEEETT-----------TTEEEEEECCCCCGGGGGGSSSCSCCCCCEE----ETTEEEEECTTSEEE
T ss_pred             CCEEEEECCCCeEEEEECC-----------CCcEEEEEcCCCCccccccccccCCCCCceE----ECCEEEEEcCCCEEE
Confidence            4556667778899999986           3454433332211          01 12232    256788889999999


Q ss_pred             EEeCCCCcEEEEEEecCC-C----cCeE-EEEeeCCCCCcEEEEee-----cCCeEEEEEeecCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNH-D----SSVN-SIAWAPKEFGLILACGS-----SDGTISFLTYMSDTN  148 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h-~----~~v~-~v~~~p~~~~~~lasgs-----~d~~i~i~~~~~~~~  148 (318)
                      .+|..+++.  .+++..+ .    ..+. ...+. +  +.+++..+     .++.|..+|..+++.
T Consensus       142 alD~~tG~~--~W~~~~~~~~~~~~~~~~~p~v~-~--~~v~v~~~~~~~~~~g~v~a~D~~tG~~  202 (677)
T 1kb0_A          142 ALDAATGKE--VWHQNTFEGQKGSLTITGAPRVF-K--GKVIIGNGGAEYGVRGYITAYDAETGER  202 (677)
T ss_dssp             EEETTTCCE--EEEEETTTTCCSSCBCCSCCEEE-T--TEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred             EEECCCCCE--EeeecCCcCcCcCcccccCcEEE-C--CEEEEEecccccCCCCEEEEEECCCCcE
Confidence            999998874  3444332 1    1111 11111 2  34443332     268888888765553

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.97  E-value=0.0049  Score=51.31  Aligned_cols=184  Identities=10%  Similarity=0.053  Sum_probs=107.9

Q ss_pred             cceeeeeeecCCCCEEEEeeCCC--cEEEEEcCCCcCCCCCCCCcceEEEEecccccC-eEEEEecCCCCCcEEEEEECC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDH--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~~~~~~~~las~s~D   89 (318)
                      ......+.|+. +.+..|.+.+|  .|+++|++           +++++......... --.+...   .+.+....-.+
T Consensus        20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-----------tgkv~~~~~l~~~~fgeGi~~~---~~~ly~ltw~~   84 (243)
T 3mbr_X           20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-----------TGRILQRAEVPPPYFGAGIVAW---RDRLIQLTWRN   84 (243)
T ss_dssp             TCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-----------TCCEEEEEECCTTCCEEEEEEE---TTEEEEEESSS
T ss_pred             ccccccEEEEC-CEEEEECCCCCCceEEEEECC-----------CCCEEEEEeCCCCcceeEEEEe---CCEEEEEEeeC
Confidence            34566788876 67777777764  89999997           45666665433222 1234442   24455555568


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccc---cce
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIG---CNA  164 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~---v~~  164 (318)
                      +.+.++|..+.+.+..+...+   .-..+  .+++ ..++++ ..++.|.++|....+   ....+.  .+..+   ++.
T Consensus        85 ~~v~v~D~~tl~~~~ti~~~~---~Gwgl--t~dg-~~L~vS-dgs~~l~~iDp~t~~---~~~~I~V~~~g~~~~~lNe  154 (243)
T 3mbr_X           85 HEGFVYDLATLTPRARFRYPG---EGWAL--TSDD-SHLYMS-DGTAVIRKLDPDTLQ---QVGSIKVTAGGRPLDNLNE  154 (243)
T ss_dssp             SEEEEEETTTTEEEEEEECSS---CCCEE--EECS-SCEEEE-CSSSEEEEECTTTCC---EEEEEECEETTEECCCEEE
T ss_pred             CEEEEEECCcCcEEEEEeCCC---CceEE--eeCC-CEEEEE-CCCCeEEEEeCCCCe---EEEEEEEccCCccccccee
Confidence            999999998877655555433   22334  4553 344444 457788888754322   122222  22222   234


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-----------CCCCeeEEEEccCCC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-----------HSDWVRDVAWAPSWG  233 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-----------h~~~V~~v~~sp~~~  233 (318)
                      +.|..                  +..+|..-.+..|.+.|..+++......+.+           -.+..+.|+|+|+  
T Consensus       155 Le~~~------------------G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~--  214 (243)
T 3mbr_X          155 LEWVN------------------GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE--  214 (243)
T ss_dssp             EEEET------------------TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT--
T ss_pred             eEEeC------------------CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC--
Confidence            44432                  3445555567789999999887655544432           1134689999997  


Q ss_pred             CCccEEEEE
Q psy2762         234 LSKCMIASC  242 (318)
Q Consensus       234 ~~~~~l~s~  242 (318)
                       ..+++++|
T Consensus       215 -~~~lfVTG  222 (243)
T 3mbr_X          215 -HDRLFVTG  222 (243)
T ss_dssp             -TTEEEEEE
T ss_pred             -CCEEEEEC
Confidence             35666666

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=97.97  E-value=0.0058  Score=51.34  Aligned_cols=222  Identities=12%  Similarity=0.013  Sum_probs=122.3

Q ss_pred             eeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .+..+++++++. ++++...++.|.+++++..           .....+.........+++.+ ..+.++++-...+.|.
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-----------~~~~~~~~~~~~p~~ia~d~-~~~~lyv~d~~~~~I~  104 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-----------EPTTIIRQDLGSPEGIALDH-LGRTIFWTDSQLDRIE  104 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSC-----------CCEEEECTTCCCEEEEEEET-TTTEEEEEETTTTEEE
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCC-----------CcEEEEECCCCCccEEEEEe-cCCeEEEEECCCCEEE
Confidence            456888998655 4555556789999998632           11122222224567888863 2345555555678999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec--CCeEEEEEeecCCCCcceeeec-ccccccceeeeCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS--DGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPG  170 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~--d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~  170 (318)
                      ++++........  ..........+++.|++ +.++++...  .+.|..+++. +..   ...+. ........++++|+
T Consensus       105 ~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~-g~lyv~~~~~~~~~I~~~~~d-g~~---~~~~~~~~~~~P~gia~d~~  177 (267)
T 1npe_A          105 VAKMDGTQRRVL--FDTGLVNPRGIVTDPVR-GNLYWTDWNRDNPKIETSHMD-GTN---RRILAQDNLGLPNGLTFDAF  177 (267)
T ss_dssp             EEETTSCSCEEE--ECSSCSSEEEEEEETTT-TEEEEEECCSSSCEEEEEETT-SCC---CEEEECTTCSCEEEEEEETT
T ss_pred             EEEcCCCCEEEE--EECCCCCccEEEEeeCC-CEEEEEECCCCCcEEEEEecC-CCC---cEEEEECCCCCCcEEEEcCC
Confidence            999875432222  12112457899999963 455555433  3566665542 111   11111 11123456777775


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                      .                +..+++-...+.|.++|.++......  +.+- .....++..     .+.++++....+.|.+
T Consensus       178 ~----------------~~lyv~d~~~~~I~~~~~~g~~~~~~--~~~~-~~P~gi~~d-----~~~lyva~~~~~~v~~  233 (267)
T 1npe_A          178 S----------------SQLCWVDAGTHRAECLNPAQPGRRKV--LEGL-QYPFAVTSY-----GKNLYYTDWKTNSVIA  233 (267)
T ss_dssp             T----------------TEEEEEETTTTEEEEEETTEEEEEEE--EECC-CSEEEEEEE-----TTEEEEEETTTTEEEE
T ss_pred             C----------------CEEEEEECCCCEEEEEecCCCceEEE--ecCC-CCceEEEEe-----CCEEEEEECCCCeEEE
Confidence            2                23456666678899999875432222  2222 223566543     2455565556788999


Q ss_pred             EEcCCCcceeeEEeeec-CCcEEEEEEcCCCC
Q psy2762         251 WTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGD  281 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~  281 (318)
                      ++..+...  ...+... ....+.+++.|++-
T Consensus       234 ~d~~~g~~--~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          234 MDLAISKE--MDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             EETTTTEE--EEEECCSSCCCCCCEEEECSCC
T ss_pred             EeCCCCCc--eEEEccccccccceeeecCccC
Confidence            98875431  2222221 12356788888763

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=97.93  E-value=0.0013  Score=59.76  Aligned_cols=190  Identities=10%  Similarity=-0.013  Sum_probs=110.8

Q ss_pred             CCCCCcEEEEEECC-----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee---------cCCeEEEE
Q psy2762          76 HPQFGTLLASCSYD-----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS---------SDGTISFL  141 (318)
Q Consensus        76 ~~~~~~~las~s~D-----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs---------~d~~i~i~  141 (318)
                      +|.++++++.+...     ++|.+.|..+.+.+.....  -..+  .++++|+.. .++++..         .++.|.++
T Consensus        80 p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G~~P--gia~SpDgk-~lyVan~~~~~~~~G~~~~~Vsvi  154 (426)
T 3c75_H           80 PAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--GFLP--HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVF  154 (426)
T ss_dssp             CCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--CSSC--EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--CCCC--ceEECCCCC-EEEEEeccccccccCCCCCEEEEE
Confidence            44467766666553     6999999998875544433  2234  799999953 3333322         46688888


Q ss_pred             EeecCCCCcceeeec-c------cccccceeeeCCCCCCCccccccCCCCCCccceEEEecC--CCeEEEEEccCCeEEE
Q psy2762         142 TYMSDTNSWESRKIA-A------HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--DNLIKIWKQEGDKWIE  212 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~-~------h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d~~i~iwd~~~~~~~~  212 (318)
                      |....+   ....+. +      .......+.++|+                 ++++..+..  ++.|.+.|..+++...
T Consensus       155 D~~t~~---vv~~I~v~g~~r~~~g~~P~~~~~spD-----------------Gk~lyV~n~~~~~~VsVID~~t~kvv~  214 (426)
T 3c75_H          155 DPVTFL---PIADIELPDAPRFLVGTYQWMNALTPD-----------------NKNLLFYQFSPAPAVGVVDLEGKTFDR  214 (426)
T ss_dssp             CTTTCC---EEEEEEETTCCCCCBSCCGGGSEECTT-----------------SSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred             ECCCCc---EEEEEECCCccccccCCCcceEEEcCC-----------------CCEEEEEecCCCCeEEEEECCCCeEEE
Confidence            764332   122222 1      0123456778887                 456666653  6889999999887554


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE--EeeecCCc-EEEEEEcCCCCEEEEEeCC
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF--IMNTFDDV-VWNVSWSLTGDILTVSCGD  289 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~--~~~~~~~~-v~~v~~spdg~~l~s~~~D  289 (318)
                      .....+      +....|+   ....+++.+.|+++.+.+..........  ....-..+ ...+.|+|+++.++..+..
T Consensus       215 ~I~v~g------~~~~~p~---g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~  285 (426)
T 3c75_H          215 MLDVPD------CYHIFPA---SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT  285 (426)
T ss_dssp             EEECCS------EEEEEEE---ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT
T ss_pred             EEEcCC------ceeeccC---CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC
Confidence            433322      1233443   1345667777888777777332110000  00000111 1245789999888777888


Q ss_pred             CeEEEEEECC
Q psy2762         290 NSVSLWKENT  299 (318)
Q Consensus       290 ~~v~iW~~~~  299 (318)
                      +.|.+.|...
T Consensus       286 g~V~ViD~~~  295 (426)
T 3c75_H          286 GKIFQADLTA  295 (426)
T ss_dssp             SEEEEEEECS
T ss_pred             CcEEEEeccC
Confidence            8999988753

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.92  E-value=0.00037  Score=67.12  Aligned_cols=231  Identities=11%  Similarity=0.056  Sum_probs=117.2

Q ss_pred             eeeecCCCCEEEEeeC-CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-CC-----C
Q psy2762          18 DAEMDYLGLYLATCSS-DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-YD-----R   90 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s~-D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-~D-----g   90 (318)
                      ++++.++|++++.||. +..+.+||....         ....+..+......- ++... + ++++++.|| .+     .
T Consensus       247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~---------~W~~~~~~~~~R~~~-s~~~~-~-dg~iyv~GG~~~~~~~~~  314 (656)
T 1k3i_A          247 GISMDGNGQIVVTGGNDAKKTSLYDSSSD---------SWIPGPDMQVARGYQ-SSATM-S-DGRVFTIGGSWSGGVFEK  314 (656)
T ss_dssp             EEEECTTSCEEEECSSSTTCEEEEEGGGT---------EEEECCCCSSCCSSC-EEEEC-T-TSCEEEECCCCCSSSCCC
T ss_pred             cccCCCCCCEEEeCCCCCCceEEecCcCC---------ceeECCCCCcccccc-ceEEe-c-CCeEEEEeCcccCCcccc
Confidence            4567789999999984 568999998622         222222221111111 22222 2 488888888 44     5


Q ss_pred             eEEEEeCCCCcEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEeecCCe---------EEEEEeecCCCCcceeeeccc
Q psy2762          91 KVIIWRGDNGNWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGSSDGT---------ISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs~d~~---------i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      .+.+||+.+..+...-..   ...... ....+..+  +.+++.|+.++.         +..||...+  .|.. ....+
T Consensus       315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~--~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~--~w~~-~~~~~  388 (656)
T 1k3i_A          315 NGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSD--NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS--GDVK-SAGKR  388 (656)
T ss_dssp             CEEEEETTTTEEEEETTSCSGGGCCCC-TTGGGTTT--CSCCEEECGGGCEEECCSSSEEEEEECSTT--CEEE-EEEEC
T ss_pred             cceEeCCCCCcceeCCCcccccccccc-ccceeecC--CceEEEECCCCcEEEecCccceeeeecCCc--ceee-cCCcc
Confidence            799999988766443100   000000 00111222  344555655543         445554322  2211 11111


Q ss_pred             cc---------ccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC-----------eEEEEEccCCeEEEEE--Ec
Q psy2762         159 TI---------GCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN-----------LIKIWKQEGDKWIEET--KL  216 (318)
Q Consensus       159 ~~---------~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~-----------~i~iwd~~~~~~~~~~--~~  216 (318)
                      ..         ....+.|...                .++.++.|+.++           .|.+||..++++....  .+
T Consensus       389 ~~~~~~~~~~~~~~av~~~~~----------------~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m  452 (656)
T 1k3i_A          389 QSNRGVAPDAMCGNAVMYDAV----------------KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL  452 (656)
T ss_dssp             EETTEECCCCBTCEEEEEETT----------------TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC
T ss_pred             ccccccCCCCCCCceEeccCC----------------CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC
Confidence            10         1112222111                135677777543           6888888887775443  22


Q ss_pred             ccCCCCeeEEEEccCCCCCccEEEEEeCC-----------CeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEE
Q psy2762         217 ENHSDWVRDVAWAPSWGLSKCMIASCSQD-----------RKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILT  284 (318)
Q Consensus       217 ~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----------~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~  284 (318)
                      ..... -.+....|+    +++++.||.+           ..+.+||..+. .|......... ..-..+.+.|||+.++
T Consensus       453 p~~R~-~~~~~~l~~----g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-~W~~~~~~~~~R~~hs~a~ll~dg~v~v  526 (656)
T 1k3i_A          453 YFART-FHTSVVLPD----GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD-TFYKQNPNSIVRVYHSISLLLPDGRVFN  526 (656)
T ss_dssp             SSCCB-SCEEEECTT----SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-EEEECCCCSSCCCTTEEEEECTTSCEEE
T ss_pred             CCCcc-cCCeEECCC----CCEEEECCcccCcCcCCCCcccceEEEcCCCC-ceeecCCCCCccccccHhhcCCCcEEEe
Confidence            21111 123345564    7889999865           46889998663 34321101111 1122345679999999


Q ss_pred             EEeC
Q psy2762         285 VSCG  288 (318)
Q Consensus       285 s~~~  288 (318)
                      .||.
T Consensus       527 ~GG~  530 (656)
T 1k3i_A          527 GGGG  530 (656)
T ss_dssp             EECC
T ss_pred             cCCC
Confidence            9885

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.90  E-value=0.0099  Score=51.83  Aligned_cols=248  Identities=10%  Similarity=0.123  Sum_probs=128.5

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      ...+.++.|.+.+..++ ++.++.|  |...+.       .++.+.+.. .......+.++.|. +  +..++ ++.++.
T Consensus        35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~Dg-------G~tW~~~~~~~~~~~~~~~~i~~~-~--~~~~~-~g~~g~  100 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWL-VGVNATL--METRDG-------GQTWEPRTLVLDHSDYRFNSVSFQ-G--NEGWI-VGEPPI  100 (327)
T ss_dssp             SSCEEEEEESSSSCEEE-EETTTEE--EEESST-------TSSCEECCCCCSCCCCEEEEEEEE-T--TEEEE-EEETTE
T ss_pred             CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCC-------CCCCeECCCCCCCCCccEEEEEec-C--CeEEE-EECCCe
Confidence            44788999987777777 4567754  332211       112232211 11223457888885 3  34444 455665


Q ss_pred             EEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          92 VIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      |..- .+.+ .+........++..+..|.+.++  +.+++++ .++.|  |...+.-..|.... ..+...+..+.+.|+
T Consensus       101 i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~--~~~~~~~-~~g~v--~~S~DgG~tW~~~~-~~~~~~~~~~~~~~~  173 (327)
T 2xbg_A          101 MLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGN--GSAEMIT-NVGAI--YRTKDSGKNWQALV-QEAIGVMRNLNRSPS  173 (327)
T ss_dssp             EEEE-SSTTSSCEECCCCTTCSSCEEEEEEEET--TEEEEEE-TTCCE--EEESSTTSSEEEEE-CSCCCCEEEEEECTT
T ss_pred             EEEE-CCCCCCceECccccCCCCCeEEEEEECC--CCEEEEe-CCccE--EEEcCCCCCCEEee-cCCCcceEEEEEcCC
Confidence            4432 2222 23332111123455778887765  5566655 45543  33323233454322 233445667777764


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +.+++.+...+..+-+|.....+.+..  ......+..+.+.|+    +. +..++.++.+++
T Consensus       174 -----------------~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~----g~-~~~~~~~G~~~~  229 (327)
T 2xbg_A          174 -----------------GEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPD----GR-LWMIVNGGKIAF  229 (327)
T ss_dssp             -----------------SCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTT----SC-EEEEETTTEEEE
T ss_pred             -----------------CcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCC----CC-EEEEeCCceEEE
Confidence                             345665554444444443233443332  234556889999885    44 445667888887


Q ss_pred             EEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         251 WTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       251 w~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      .+......|+.....  .....+.+++|.|+++.++.+ .++.+ ++..+-+..|..+.
T Consensus       230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~  286 (327)
T 2xbg_A          230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDV  286 (327)
T ss_dssp             EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECG
T ss_pred             ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcC
Confidence            743323334322111  112358899999988877755 46766 33334444687654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.85  E-value=0.0024  Score=61.59  Aligned_cols=55  Identities=9%  Similarity=0.212  Sum_probs=37.6

Q ss_pred             CCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         244 QDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       244 ~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .++.|.-||+.+.. .|+..    ...+++...+...|.+|+.++.|+.|+.||..++..
T Consensus       436 ~~g~l~A~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~  491 (668)
T 1kv9_A          436 VSGALLAWDPVKQKAAWKVP----YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA  491 (668)
T ss_dssp             CEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ccceEEEEeCCCCcEEEEcc----CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence            35889999987653 23222    223344445556788899999999999999877643

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.82  E-value=0.011  Score=49.77  Aligned_cols=208  Identities=13%  Similarity=0.185  Sum_probs=123.4

Q ss_pred             EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      .+.+-.+.+..++|.+. .+.+++....++.|...|.. ++......+.+. .....|++.++  +.++++.-.++.+.+
T Consensus        21 ~l~g~~~~lSGla~~~~-~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~--g~~~vs~E~~~~l~~   95 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQ-SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGD--NQFVISDERDYAIYV   95 (255)
T ss_dssp             ECTTCCSCEEEEEEETT-TTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECST--TEEEEEETTTTEEEE
T ss_pred             ECCCcccCcceeEEeCC-CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCC--CEEEEEECCCCcEEE
Confidence            45666678999999743 45677778888899988987 665555545442 45778888876  566666556677777


Q ss_pred             EEeecCCCCcceeeec------ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---CeEE
Q psy2762         141 LTYMSDTNSWESRKIA------AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---DKWI  211 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---~~~~  211 (318)
                      +++.............      ....+...++|.|.                 ++.|.++.+.....||..+.   ....
T Consensus        96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~-----------------~~~L~va~E~~p~~i~~~~g~~~~~~l  158 (255)
T 3qqz_A           96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ-----------------DHTFWFFKEKNPIEVYKVNGLLSSNEL  158 (255)
T ss_dssp             EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT-----------------TTEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred             EEcCCCCeeeeeeeeccccccccccCCcceEEEeCC-----------------CCEEEEEECcCCceEEEEcccccCCce
Confidence            7764333111111111      12233467777775                 23444455544555555431   1101


Q ss_pred             EEEE---c--ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee-ec------CCcEEEEEEcCC
Q psy2762         212 EETK---L--ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN-TF------DDVVWNVSWSLT  279 (318)
Q Consensus       212 ~~~~---~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~-~~------~~~v~~v~~spd  279 (318)
                      ....   +  ..+...+..|+++|.   .+.+++.....+.|-++|....... ...+. +.      -..--.|+|.|+
T Consensus       159 ~i~~~~~~~~~~~~~d~S~l~~dp~---tg~lliLS~~s~~L~~~d~~g~~~~-~~~L~~g~~~l~~~~~qpEGia~d~~  234 (255)
T 3qqz_A          159 HISKDKALQRQFTLDDVSGAEFNQQ---KNTLLVLSHESRALQEVTLVGEVIG-EMSLTKGSRGLSHNIKQAEGVAMDAS  234 (255)
T ss_dssp             EEEECHHHHHTCCSSCCCEEEEETT---TTEEEEEETTTTEEEEECTTCCEEE-EEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred             eeecchhhccccccCCceeEEEcCC---CCeEEEEECCCCeEEEEcCCCCEEE-EEEcCCccCCcccccCCCCeeEECCC
Confidence            1110   0  123345789999997   5778888888899999988764211 11121 11      125679999999


Q ss_pred             CCEEEEEeCCCeEEEEEE
Q psy2762         280 GDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       280 g~~l~s~~~D~~v~iW~~  297 (318)
                      |++. .+++-+  .+|..
T Consensus       235 G~ly-IvsE~n--~~y~f  249 (255)
T 3qqz_A          235 GNIY-IVSEPN--RFYRF  249 (255)
T ss_dssp             CCEE-EEETTT--EEEEE
T ss_pred             CCEE-EEcCCc--eEEEE
Confidence            9855 457777  44543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.82  E-value=0.016  Score=51.73  Aligned_cols=245  Identities=8%  Similarity=-0.045  Sum_probs=130.8

Q ss_pred             eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      .+.+..+.+.++++  ....|+..++...           .....+. .......++|.+ ..+.++++-...+.|..++
T Consensus        80 ~C~~~~~~~~l~~~--~~~~I~~i~~~~~-----------~~~~~~~-~~~~~~gl~~d~-~~~~ly~~D~~~~~I~r~~  144 (386)
T 3v65_B           80 SCKALGPEPVLLFA--NRIDIRQVLPHRS-----------EYTLLLN-NLENAIALDFHH-RRELVFWSDVTLDRILRAN  144 (386)
T ss_dssp             CEEECSSCCEEEEE--CBSCEEEECTTSC-----------CCEEEEC-SCSCEEEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred             eECCccccceeEee--cCccceeeccCCC-----------cEEEEec-CCCccEEEEEec-CCCeEEEEeCCCCcEEEEe
Confidence            34444454433333  3456777777521           1112222 234577899964 3466666666678899999


Q ss_pred             CCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcc
Q psy2762          97 GDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE  176 (318)
Q Consensus        97 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~  176 (318)
                      +..+....+.  .........+++.+.. +.++.+-...+.|.+.++. +.  .....+.........+++.|..     
T Consensus       145 ~~g~~~~~~~--~~~~~~p~glavd~~~-g~lY~~d~~~~~I~~~~~d-g~--~~~~l~~~~l~~P~giavdp~~-----  213 (386)
T 3v65_B          145 LNGSNVEEVV--STGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLD-GA--HRKVLLWQSLEKPRAIALHPME-----  213 (386)
T ss_dssp             TTSCCEEEEE--CSSCSCCCCEEEETTT-TEEEEEETTTTEEEECBTT-SC--SCEEEECSSCSCEEEEEEETTT-----
T ss_pred             cCCCCcEEEE--eCCCCCccEEEEEeCC-CeEEEEcCCCCeEEEEeCC-CC--ceEEeecCCCCCCcEEEEEcCC-----
Confidence            8765432221  2122345677888753 4555665556666665432 11  1111111111234566666642     


Q ss_pred             ccccCCCCCCccceEEEecCC-CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         177 LDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       177 ~~~~~~~~~~~~~~lasgs~d-~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                                 +..+.+-... +.|..++++.......  ....-...+.|+|+|+   .+.+.++=+..+.|..++...
T Consensus       214 -----------g~ly~td~~~~~~I~r~~~dG~~~~~~--~~~~~~~PnGlavd~~---~~~lY~aD~~~~~I~~~d~dG  277 (386)
T 3v65_B          214 -----------GTIYWTDWGNTPRIEASSMDGSGRRII--ADTHLFWPNGLTIDYA---GRRMYWVDAKHHVIERANLDG  277 (386)
T ss_dssp             -----------TEEEEEECSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEEGG---GTEEEEEETTTTEEEEECTTS
T ss_pred             -----------CeEEEeccCCCCEEEEEeCCCCCcEEE--EECCCCCeeeEEEeCC---CCEEEEEECCCCEEEEEeCCC
Confidence                       2334444444 6788888775432211  1223345789999986   355556556678899998765


Q ss_pred             CcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       256 ~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      ....  ............+++ ..+..+.+-...+.|...+...+.....+
T Consensus       278 ~~~~--~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i  325 (386)
T 3v65_B          278 SHRK--AVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII  325 (386)
T ss_dssp             CSCE--EEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             CeeE--EEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence            3321  122222334667888 35556666656777777764444444433

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.70  E-value=0.021  Score=49.68  Aligned_cols=235  Identities=10%  Similarity=0.073  Sum_probs=120.7

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ...+.++.|++ +..++ ++.++.|  |...+.       .++.+.+.....+.+.++.+.+..  ++..++.+ .++.|
T Consensus        79 ~~~~~~i~~~~-~~~~~-~g~~g~i--~~S~Dg-------G~tW~~~~~~~~~~~~~~~i~~~~--~~~~~~~~-~~g~v  144 (327)
T 2xbg_A           79 DYRFNSVSFQG-NEGWI-VGEPPIM--LHTTDG-------GQSWSQIPLDPKLPGSPRLIKALG--NGSAEMIT-NVGAI  144 (327)
T ss_dssp             CCEEEEEEEET-TEEEE-EEETTEE--EEESST-------TSSCEECCCCTTCSSCEEEEEEEE--TTEEEEEE-TTCCE
T ss_pred             CccEEEEEecC-CeEEE-EECCCeE--EEECCC-------CCCceECccccCCCCCeEEEEEEC--CCCEEEEe-CCccE
Confidence            44688888876 44444 4556644  333211       122333222222345567777643  25555554 45543


Q ss_pred             -EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecC-CCCcceeeecccccccceeeeCCC
Q psy2762          93 -IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSD-TNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        93 -~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~-~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                       +-.|- ...+....  ..+...+..+++.|+  +.+++.+. ++.+..  .... -..|.... ......+..+.+.|+
T Consensus       145 ~~S~Dg-G~tW~~~~--~~~~~~~~~~~~~~~--~~~~~~g~-~G~~~~--S~d~gG~tW~~~~-~~~~~~~~~~~~~~~  215 (327)
T 2xbg_A          145 YRTKDS-GKNWQALV--QEAIGVMRNLNRSPS--GEYVAVSS-RGSFYS--TWEPGQTAWEPHN-RTTSRRLHNMGFTPD  215 (327)
T ss_dssp             EEESST-TSSEEEEE--CSCCCCEEEEEECTT--SCEEEEET-TSSEEE--EECTTCSSCEEEE-CCSSSCEEEEEECTT
T ss_pred             EEEcCC-CCCCEEee--cCCCcceEEEEEcCC--CcEEEEEC-CCcEEE--EeCCCCCceeECC-CCCCCccceeEECCC
Confidence             33332 12344432  245567889999987  56666554 444322  2121 23343322 123344556666664


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEEEEEcc--cCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIEETKLE--NHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~~~~~~--~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                                       +. +..++.+|.+++.+.+.+ .+... ...  .+...+.+|.|.|+    +..++ ++.++.
T Consensus       216 -----------------g~-~~~~~~~G~~~~s~~D~G~tW~~~-~~~~~~~~~~~~~v~~~~~----~~~~~-~g~~g~  271 (327)
T 2xbg_A          216 -----------------GR-LWMIVNGGKIAFSDPDNSENWGEL-LSPLRRNSVGFLDLAYRTP----NEVWL-AGGAGA  271 (327)
T ss_dssp             -----------------SC-EEEEETTTEEEEEETTEEEEECCC-BCTTSSCCSCEEEEEESSS----SCEEE-EESTTC
T ss_pred             -----------------CC-EEEEeCCceEEEecCCCCCeeEec-cCCcccCCcceEEEEecCC----CEEEE-EeCCCe
Confidence                             22 445566788777643322 23211 111  12235889999874    55555 455777


Q ss_pred             EEEEEcCCCcceeeEEee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         248 VIIWTSNDYVTWTPFIMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       248 i~vw~~~~~~~~~~~~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      | ++.......|+..... .....+.+|.|.++++ ++.++.+|++.-++
T Consensus       272 i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          272 L-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             E-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred             E-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence            6 4445545556432111 1235678899986665 55677788765443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.68  E-value=0.024  Score=49.84  Aligned_cols=248  Identities=8%  Similarity=-0.052  Sum_probs=134.2

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +..+|.+..+.+.++++-  ...|+..+++.           ......+.+ ......++|.+ ..+.++.+-...+.|.
T Consensus        34 d~~~C~~~~~~~~ll~~~--~~~I~~i~~~g-----------~~~~~~~~~-~~~~~~l~~d~-~~~~ly~~D~~~~~I~   98 (349)
T 3v64_C           34 DRRSCKALGPEPVLLFAN--RIDIRQVLPHR-----------SEYTLLLNN-LENAIALDFHH-RRELVFWSDVTLDRIL   98 (349)
T ss_dssp             TSSCEEESSSCCEEEEEC--BSCEEEECTTS-----------CCEEEEECS-CSCEEEEEEET-TTTEEEEEETTTTEEE
T ss_pred             CCCcccccccCceeEeec--ccceEEEeCCC-----------CeeEEeecC-CCceEEEEEec-cccEEEEEeccCCceE
Confidence            344555555644444432  34577776642           122222232 34478899964 3456666666678899


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      .+++..+......  .........+++.+.. +.++.+-...+.|.+.+.. +..  ....+.........+++.|..  
T Consensus        99 r~~~~g~~~~~~~--~~~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~d-G~~--~~~l~~~~l~~P~~iavdp~~--  170 (349)
T 3v64_C           99 RANLNGSNVEEVV--STGLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLD-GAH--RKVLLWQSLEKPRAIALHPME--  170 (349)
T ss_dssp             EEETTSCSCEEEE--CSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEETT-SCS--CEEEECTTCSCEEEEEEETTT--
T ss_pred             EEecCCCCceEEE--eCCCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCC-CCc--eEEEEeCCCCCcceEEEecCc--
Confidence            9988765432221  1122345678888753 4566666666777776642 111  111111122234567777642  


Q ss_pred             CccccccCCCCCCccceEEEecCC-CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCD-NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d-~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                    +..+.+-... +.|...+++.......  ....-...+.|+++|+   .+.+..+=+..+.|..++
T Consensus       171 --------------g~ly~td~~~~~~I~r~~~dG~~~~~~--~~~~~~~PnGla~d~~---~~~lY~aD~~~~~I~~~~  231 (349)
T 3v64_C          171 --------------GTIYWTDWGNTPRIEASSMDGSGRRII--ADTHLFWPNGLTIDYA---GRRMYWVDAKHHVIERAN  231 (349)
T ss_dssp             --------------TEEEEEECSSSCEEEEEETTSCSCEES--CCSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEE
T ss_pred             --------------CeEEEeccCCCCEEEEEeCCCCCcEEE--EECCCCCcceEEEeCC---CCEEEEEECCCCEEEEEe
Confidence                          2334444444 7788888775432111  1222345789999986   355666666678899998


Q ss_pred             cCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         253 SNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      .......  ............+++. .+..+.+-...+.|...+...+.....+
T Consensus       232 ~dG~~~~--~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i  282 (349)
T 3v64_C          232 LDGSHRK--AVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEII  282 (349)
T ss_dssp             TTSCSCE--EEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             CCCCceE--EEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence            8754321  1222223456678883 5555555556677766663344444433

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.67  E-value=0.003  Score=61.82  Aligned_cols=199  Identities=11%  Similarity=0.065  Sum_probs=99.2

Q ss_pred             CeEEEEec-CCCCCcEEEEEEC-C----CeEEEEeCCCC-cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----
Q psy2762          68 PVWQVAWA-HPQFGTLLASCSY-D----RKVIIWRGDNG-NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----  136 (318)
Q Consensus        68 ~V~~v~~~-~~~~~~~las~s~-D----g~v~vWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----  136 (318)
                      .+...+|+ +  ||++||-+.. +    .+|.++|+.++ +... ..+.   .....++|+||  +..|+....|.    
T Consensus       175 ~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~---~~~~~~~WspD--g~~l~y~~~d~~~~~  246 (751)
T 2xe4_A          175 DVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVS---GTNGEIVWGPD--HTSLFYVTKDETLRE  246 (751)
T ss_dssp             EEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEE---EECSCCEECSS--TTEEEEEEECTTCCE
T ss_pred             EEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-cccc---CceeeEEEecC--CCEEEEEEECCCCCC
Confidence            57778997 4  5887775433 2    25999999887 5211 0111   11346789999  44455555542    


Q ss_pred             -eEEEEEeecCCCCcceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEec---CCCeEEEEEccCC--
Q psy2762         137 -TISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG---CDNLIKIWKQEGD--  208 (318)
Q Consensus       137 -~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs---~d~~i~iwd~~~~--  208 (318)
                       .|.++++  +........+.  ....-...+.|+|+                 +++|+..+   ....|+++|+.++  
T Consensus       247 ~~v~~~~l--gt~~~~~~lv~~~~~~~~~~~~~~SpD-----------------g~~l~~~~~~~~~~~l~~~d~~~~~~  307 (751)
T 2xe4_A          247 NKVWRHVM--GKLQSEDVCLYEEHNPLFSAFMYKAAD-----------------TNTLCIGSQSPETAEVHLLDLRKGNA  307 (751)
T ss_dssp             EEEEEEET--TSCGGGCEEEEECCCTTCEEEEEECTT-----------------SSEEEEEEECSSCEEEEEEESSSCTT
T ss_pred             CEEEEEEC--CCCchhcEEEEecCCCceEEEEEECCC-----------------CCEEEEEecCCCCceEEEEECCCCCC
Confidence             3444544  22211111221  11122346678887                 34555433   2335777887754  


Q ss_pred             eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC--C--eEEEEEcCCCcceee-EEeeecCCcEEEEEEcCCCCEE
Q psy2762         209 KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD--R--KVIIWTSNDYVTWTP-FIMNTFDDVVWNVSWSLTGDIL  283 (318)
Q Consensus       209 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D--~--~i~vw~~~~~~~~~~-~~~~~~~~~v~~v~~spdg~~l  283 (318)
                      ++..............++.|+..    +.+++....+  +  .|..+++.+...+.. .........+.++++. .+.++
T Consensus       308 ~~~~~~l~~~~~~~~~s~~~~~g----~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv  382 (751)
T 2xe4_A          308 HNTLEIVRPREKGVRYDVQMHGT----SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLV  382 (751)
T ss_dssp             CCCEEESSCCCTTCCEEEEEETT----TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEE
T ss_pred             CceeEEeecCCCCceEEEeeeeC----CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEE
Confidence            22001112334445566665542    4444444443  3  455556543222222 1111112245566665 34456


Q ss_pred             EEEeCCCeEEEEEEC
Q psy2762         284 TVSCGDNSVSLWKEN  298 (318)
Q Consensus       284 ~s~~~D~~v~iW~~~  298 (318)
                      ++...|+..+||-.+
T Consensus       383 ~~~~~~g~~~l~~~d  397 (751)
T 2xe4_A          383 VAGRRAGLTRIWTMM  397 (751)
T ss_dssp             EEEEETTEEEEEEEE
T ss_pred             EEEEeCCEEEEEEEe
Confidence            666778877777655

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.67  E-value=0.021  Score=48.70  Aligned_cols=198  Identities=16%  Similarity=0.252  Sum_probs=102.9

Q ss_pred             CcEEEEEECC-----CeEEEEeCCCCc---EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecC
Q psy2762          80 GTLLASCSYD-----RKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSD  146 (318)
Q Consensus        80 ~~~las~s~D-----g~v~vWd~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~  146 (318)
                      +.+++.|+.+     ..+.++|+.+..   +.....+......-..+.+  +  +.+++.|+.++     .+.++|+  .
T Consensus        63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~d~--~  136 (301)
T 2vpj_A           63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--G--DMIYVSGGFDGSRRHTSMERYDP--N  136 (301)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCEEEEEET--T
T ss_pred             CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--C--CEEEEEcccCCCcccceEEEEcC--C
Confidence            6777777765     468889988877   7665443322222222222  3  56777777553     3444443  3


Q ss_pred             CCCcceeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCC
Q psy2762         147 TNSWESRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       147 ~~~~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      .+.|....-.... .....+.+.                   ++.++.|+.+     ..+.+||..++++.....+....
T Consensus       137 ~~~W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r  197 (301)
T 2vpj_A          137 IDQWSMLGDMQTAREGAGLVVAS-------------------GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR  197 (301)
T ss_dssp             TTEEEEEEECSSCCBSCEEEEET-------------------TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred             CCeEEECCCCCCCcccceEEEEC-------------------CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc
Confidence            3334322111100 000111110                   2455666654     45889999888886654443322


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----C
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----N  290 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~  290 (318)
                      ..-..+.+      ++.+++.|+.+     ..+.+||..+.. |....... .......+...+++.++.|+.+     .
T Consensus       198 ~~~~~~~~------~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~~~~  269 (301)
T 2vpj_A          198 SGAGVALL------NDHIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSMT-TPRCYVGATVLRGRLYAIAGYDGNSLLS  269 (301)
T ss_dssp             BSCEEEEE------TTEEEEECCBCSSSBCCCEEEEETTTTE-EEEECCCS-SCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred             ccceEEEE------CCEEEEEeCCCCCcccceEEEEeCCCCc-EEECCCCC-CcccceeEEEECCEEEEEcCcCCCcccc
Confidence            22222332      25677778765     458889887643 43221111 1111111222267777777755     3


Q ss_pred             eEEEEEECCCCceEEEeeecc
Q psy2762         291 SVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       291 ~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      .+.+||..+ ..|..+..|..
T Consensus       270 ~v~~yd~~~-~~W~~~~~~~~  289 (301)
T 2vpj_A          270 SIECYDPII-DSWEVVTSMGT  289 (301)
T ss_dssp             EEEEEETTT-TEEEEEEEEEE
T ss_pred             cEEEEcCCC-CeEEEcCCCCc
Confidence            566777544 68998877654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.65  E-value=0.023  Score=48.80  Aligned_cols=214  Identities=12%  Similarity=0.049  Sum_probs=114.4

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      .+++..+... .....++|.+  +++++++-...+.|..||.... .......   ...+..+++.|+  +.++++....
T Consensus        22 ~~~~~~~p~~-~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~---~~~p~gia~~~d--G~l~vad~~~   92 (306)
T 2p4o_A           22 AKIITSFPVN-TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN-QQIHATV---EGKVSGLAFTSN--GDLVATGWNA   92 (306)
T ss_dssp             EEEEEEECTT-CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC-EEEEEEC---SSEEEEEEECTT--SCEEEEEECT
T ss_pred             ceEeEeCCCC-CCcceEEECC--CCCEEEEeCCCCeEEEECCCCc-eEEEEeC---CCCceeEEEcCC--CcEEEEeccC
Confidence            4556666543 4567899864  4777777667899999997753 3333322   346889999998  4555554332


Q ss_pred             -C-eEEEEEeecCCCCcceeeecccc--cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE
Q psy2762         136 -G-TISFLTYMSDTNSWESRKIAAHT--IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI  211 (318)
Q Consensus       136 -~-~i~i~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~  211 (318)
                       + .|..++.  ...  ....+....  .....++..+.                 +..+++-..++.|.++|...+...
T Consensus        93 ~~~~v~~~d~--~~g--~~~~~~~~~~~~~~~g~~~~~~-----------------~~~~v~d~~~g~i~~~d~~~~~~~  151 (306)
T 2p4o_A           93 DSIPVVSLVK--SDG--TVETLLTLPDAIFLNGITPLSD-----------------TQYLTADSYRGAIWLIDVVQPSGS  151 (306)
T ss_dssp             TSCEEEEEEC--TTS--CEEEEEECTTCSCEEEEEESSS-----------------SEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CcceEEEEcC--CCC--eEEEEEeCCCccccCcccccCC-----------------CcEEEEECCCCeEEEEeCCCCcEe
Confidence             2 2433332  221  111211110  00111111111                 234555556788888887654211


Q ss_pred             EE--E------EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC-CcceeeEEeeecCCcEEEEEEcCCCCE
Q psy2762         212 EE--T------KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND-YVTWTPFIMNTFDDVVWNVSWSLTGDI  282 (318)
Q Consensus       212 ~~--~------~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~-~~~~~~~~~~~~~~~v~~v~~spdg~~  282 (318)
                      ..  .      ...+.-...+.|  +|+   .+.++++-...+.|..++... ............ .....++++++|++
T Consensus       152 v~~~~~~~~~~~~~~~~~~pngi--s~d---g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l  225 (306)
T 2p4o_A          152 IWLEHPMLARSNSESVFPAANGL--KRF---GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNL  225 (306)
T ss_dssp             EEEECGGGSCSSTTCCSCSEEEE--EEE---TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCE
T ss_pred             EEEECCccccccccCCCCcCCCc--CcC---CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCE
Confidence            10  0      001111234556  675   234566666788999999864 111111111111 23457899999988


Q ss_pred             EEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         283 LTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       283 l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      +++-...+.|.+++  ..|+...+.
T Consensus       226 ~va~~~~~~V~~~~--~~G~~~~~~  248 (306)
T 2p4o_A          226 YGATHIYNSVVRIA--PDRSTTIIA  248 (306)
T ss_dssp             EEECBTTCCEEEEC--TTCCEEEEE
T ss_pred             EEEeCCCCeEEEEC--CCCCEEEEe
Confidence            77666678888886  345554443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.62  E-value=0.0017  Score=56.06  Aligned_cols=176  Identities=14%  Similarity=0.082  Sum_probs=96.9

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT  159 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~  159 (318)
                      +..|..++.++.+..+|.. +..  .+....+...+.++...++  +. +..++.++.|..++.. +.   .........
T Consensus       107 ~~~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g~---~~~~~~~~~  176 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYATPIVSED--GT-IYVGSNDNYLYAINPD-GT---EKWRFKTND  176 (330)
T ss_dssp             TTEEEEECTTSEEEEECTT-SCE--EEEEECSSCCCSCCEECTT--SC-EEEECTTSEEEEECTT-SC---EEEEEECSS
T ss_pred             CCEEEEEecCCEEEEEcCC-CCE--EEEEcCCCceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-CC---EeEEEecCC
Confidence            3457778889999999987 553  3333334444566666655  44 4456777888777653 22   111111122


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      ..+..+...++                 + .|..++  +.|..+| .+++..  ..+......+.++...++    + .|
T Consensus       177 ~~~~~~~~d~~-----------------g-~l~v~t--~~l~~~d-~~g~~~--~~~~~~~~~~~~~~~~~~----g-~l  228 (330)
T 3hxj_A          177 AITSAASIGKD-----------------G-TIYFGS--DKVYAIN-PDGTEK--WNFYAGYWTVTRPAISED----G-TI  228 (330)
T ss_dssp             CCCSCCEECTT-----------------C-CEEEES--SSEEEEC-TTSCEE--EEECCSSCCCSCCEECTT----S-CE
T ss_pred             CceeeeEEcCC-----------------C-EEEEEe--CEEEEEC-CCCcEE--EEEccCCcceeceEECCC----C-eE
Confidence            22333333222                 2 244455  7889999 444322  223334455778888764    4 35


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ..++.++.|..++......+.   .......+.++...++|+ |..++.++.|..++.
T Consensus       229 ~v~t~~~gl~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          229 YVTSLDGHLYAINPDGTEKWR---FKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP  282 (330)
T ss_dssp             EEEETTTEEEEECTTSCEEEE---EECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred             EEEcCCCeEEEECCCCCEeEE---eeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence            556778888888754432221   111222233455566665 455777878888873

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=97.56  E-value=0.0037  Score=55.68  Aligned_cols=236  Identities=11%  Similarity=-0.062  Sum_probs=125.8

Q ss_pred             eeeeeeecC-C-CCEEEEeeCCC----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-
Q psy2762          15 MIHDAEMDY-L-GLYLATCSSDH----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-   87 (318)
Q Consensus        15 ~v~~~~~~~-~-g~~l~s~s~D~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-   87 (318)
                      .+.+..+.+ . ....++...++    +|.|.|.+           +++++.++.....+  .+.+++  ++++|+.+. 
T Consensus        20 ~~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~-----------t~~v~~~i~vG~~P--~i~~sp--Dg~~lyVan~   84 (368)
T 1mda_H           20 GSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAG-----------CGVTLGHSLGAFLS--LAVAGH--SGSDFALAST   84 (368)
T ss_dssp             CCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETT-----------TTEEEEEEEECTTC--EEEECT--TSSCEEEEEE
T ss_pred             ccccccCCCCCCCeEEEECCccCCccceEEEEECC-----------CCeEEEEEeCCCCC--ceEECC--CCCEEEEEcc
Confidence            333444443 3 23444555455    78899986           45778888755556  688874  588888876 


Q ss_pred             ---------CCCeEEEEeCCCCcEEEEEEecCC-----CcCeEEEEeeCCCCCcEEEEeec--CCeEEE--EEeecCCCC
Q psy2762          88 ---------YDRKVIIWRGDNGNWFKYYEYNNH-----DSSVNSIAWAPKEFGLILACGSS--DGTISF--LTYMSDTNS  149 (318)
Q Consensus        88 ---------~Dg~v~vWd~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~~lasgs~--d~~i~i--~~~~~~~~~  149 (318)
                               .+++|.+||..+.+......+.+.     ......++++|+  ++++..+..  +..|.+  +|...    
T Consensus        85 ~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpD--Gk~lyVan~~~~~~v~V~~iD~~t----  158 (368)
T 1mda_H           85 SFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFGSSAAAGLSVPGASD----  158 (368)
T ss_dssp             EETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECSSSCEEEEEETTTEE----
T ss_pred             cccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCC--CCEEEEEccCCCCeEEEEEEchhh----
Confidence                     378999999998876555444310     123457899999  545555543  456777  65422    


Q ss_pred             cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-----CeEEEEE--EcccCCCC
Q psy2762         150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-----DKWIEET--KLENHSDW  222 (318)
Q Consensus       150 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-----~~~~~~~--~~~~h~~~  222 (318)
                        ...+..  .++  ....|+.                ...+++.+.|+.+-+.+...     ++.....  .+.--..+
T Consensus       159 --v~~i~v--~~~--~~~~p~g----------------~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P  216 (368)
T 1mda_H          159 --DQLTKS--ASC--FHIHPGA----------------AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA  216 (368)
T ss_dssp             --EEEEEC--SSC--CCCEEEE----------------TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred             --ceEEEC--CCc--eEEccCC----------------CeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence              112210  011  1111211                12355667788887778765     2211000  01111222


Q ss_pred             eeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee------cC----CcEEEEEEcCCCCEEEEEeC----
Q psy2762         223 VRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------FD----DVVWNVSWSLTGDILTVSCG----  288 (318)
Q Consensus       223 V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~------~~----~~v~~v~~spdg~~l~s~~~----  288 (318)
                      .   . +++    +..++-.+. +.+.+.|.............-      ..    ....-++|+|||+.|..+..    
T Consensus       217 ~---~-~~~----~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~  287 (368)
T 1mda_H          217 A---Q-ANY----PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSR  287 (368)
T ss_dssp             E---E-ETT----TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSS
T ss_pred             c---c-ccc----CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccC
Confidence            2   2 443    334444445 888888875421000000000      00    01111689999998876533    


Q ss_pred             -----CCeEEEEEECCCCc
Q psy2762         289 -----DNSVSLWKENTDGA  302 (318)
Q Consensus       289 -----D~~v~iW~~~~~~~  302 (318)
                           ++.+.++|..+...
T Consensus       288 ~~~~~~~~~~ViD~~t~~v  306 (368)
T 1mda_H          288 SCLAAAENTSSVTASVGQT  306 (368)
T ss_dssp             CTTSCEEEEEEEESSSCCE
T ss_pred             cccccCCCEEEEECCCCeE
Confidence                 23566999777543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.52  E-value=0.021  Score=55.83  Aligned_cols=117  Identities=15%  Similarity=0.061  Sum_probs=66.7

Q ss_pred             CCCcc-eeeeeeec-CCCCEEEEeeC-C----CcEEEEEcCCCcCCCCCCCCcceEE-EEecccccCeEEEEecCCCCCc
Q psy2762          10 TGHED-MIHDAEMD-YLGLYLATCSS-D----HTVKVFNLDRNLKKDDSHSQKGTLI-AELKGHSGPVWQVAWAHPQFGT   81 (318)
Q Consensus        10 ~gH~~-~v~~~~~~-~~g~~l~s~s~-D----~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~v~~~~~~~~~   81 (318)
                      .+|.. .+...+|| |||++||-... +    .+|+++|++.+.          +.+ ..+.   .....+.|++  ||+
T Consensus       169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~----------~~l~~~~~---~~~~~~~Wsp--Dg~  233 (751)
T 2xe4_A          169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPS----------QTIADKVS---GTNGEIVWGP--DHT  233 (751)
T ss_dssp             TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTT----------CCCCCCEE---EECSCCEECS--STT
T ss_pred             cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCC----------EeCCcccc---CceeeEEEec--CCC
Confidence            35554 67889999 99998874332 2    359999987320          110 0011   1134578974  577


Q ss_pred             EEEEEECCC-----eEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec---CCeEEEEEee
Q psy2762          82 LLASCSYDR-----KVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS---DGTISFLTYM  144 (318)
Q Consensus        82 ~las~s~Dg-----~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~---d~~i~i~~~~  144 (318)
                      .|+....|.     .|.++++.++.  ...++.. ........+.|+|+  +.+|+..+.   ...|.+++..
T Consensus       234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~SpD--g~~l~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEE-HNPLFSAFMYKAAD--TNTLCIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEEC-CCTTCEEEEEECTT--SSEEEEEEECSSCEEEEEEESS
T ss_pred             EEEEEEECCCCCCCEEEEEECCCCchhcEEEEec-CCCceEEEEEECCC--CCEEEEEecCCCCceEEEEECC
Confidence            777777662     57777776653  1233322 22344668899999  444544332   2345555653

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.49  E-value=0.055  Score=49.07  Aligned_cols=155  Identities=10%  Similarity=0.087  Sum_probs=83.7

Q ss_pred             eeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC-C--
Q psy2762          15 MIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD-R--   90 (318)
Q Consensus        15 ~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D-g--   90 (318)
                      ....++++| ++..|..+...+.|+.+|++.           +. +..+.........++|++  ++++|+.+... +  
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~-----------~~-v~~~~~~~~~P~~ia~d~--~G~~lyvad~~~~~~  203 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEK-----------EY-VSTVYSGLSKVRTICWTH--EADSMIITNDQNNND  203 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTT-----------TE-EEEEECCCSCEEEEEECT--TSSEEEEEECCSCTT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCC-----------CE-EEEEecCCCCcceEEEeC--CCCEEEEEeCCCCcc
Confidence            446788887 344455444447888888762           22 333333445578899863  47756555542 1  


Q ss_pred             --eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--ccccccceee
Q psy2762          91 --KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAVS  166 (318)
Q Consensus        91 --~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~  166 (318)
                        .+.+.+.. +.......+.. ......+++.|++ +.++++-..++.|..++..  ..  ....+.  ........++
T Consensus       204 ~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~-g~lyv~d~~~~~V~~~~~~--~~--~~~~~~~~~~~~~P~gia  276 (430)
T 3tc9_A          204 RPNNYILTRE-SGFKVITELTK-GQNCNGAETHPIN-GELYFNSWNAGQVFRYDFT--TQ--ETTPLFTIQDSGWEFHIQ  276 (430)
T ss_dssp             SEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTT-CCEEEEETTTTEEEEEETT--TT--EEEEEEECSSSSCCEEEE
T ss_pred             cceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCC-CEEEEEECCCCEEEEEECC--CC--cEEEEEEcCCCCcceeEE
Confidence              23333332 22210011111 1234678899943 5666666667777777642  11  111111  1112345688


Q ss_pred             eCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG  207 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~  207 (318)
                      |+|+                 ++ .+++-...+.|+.++.+.
T Consensus       277 ~~pd-----------------G~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          277 FHPS-----------------GNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             ECTT-----------------SSEEEEEETTTTEEEEEEEET
T ss_pred             EcCC-----------------CCEEEEEECCCCEEEEEeCCc
Confidence            8886                 34 455556677898887653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.47  E-value=0.051  Score=51.28  Aligned_cols=55  Identities=9%  Similarity=0.146  Sum_probs=33.9

Q ss_pred             CCCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         244 QDRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       244 ~D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .++.|..||..+.. .|+..    ....+.+......+..+..++.|+.|+.||..++..
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~----~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~  497 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKW----EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE  497 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEE----ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CCCeEEEEECCCCCEEEEec----CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence            35778888876543 23221    122233333344566777789999999999877643

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.39  E-value=0.07  Score=47.85  Aligned_cols=232  Identities=13%  Similarity=-0.018  Sum_probs=123.8

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC----cEEEEEEec
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG----NWFKYYEYN  109 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~----~~~~~~~~~  109 (318)
                      ...|+..+++..         ...   .+......+..++|.. ..+.++.+-...+.|..+++...    ....  .+.
T Consensus        91 ~~~I~~i~l~~~---------~~~---~~~~~~~~~~~l~~d~-~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~--~~~  155 (400)
T 3p5b_L           91 RHEVRKMTLDRS---------EYT---SLIPNLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VIS  155 (400)
T ss_dssp             TTEEEEECTTSC---------SCE---EEECSCSCEEEEEEET-TTTEEEEEETTTTEEEEEEC------CCCEE--EEC
T ss_pred             cceeEEEccCCc---------cee---EeccccCcceEEeeee-ccCceEEEecCCCeEEEEEcccCCCCCcceE--EEe
Confidence            468888887632         111   1223456678999964 34566666556788888887652    1111  122


Q ss_pred             CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         110 NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       110 ~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      ........+++.+.. +.++.+-...+.|.+.++. +.  .....+.........++..|..                +.
T Consensus       156 ~~~~~p~glavD~~~-~~lY~~d~~~~~I~~~~~~-g~--~~~~l~~~~~~~P~~iavdp~~----------------g~  215 (400)
T 3p5b_L          156 RDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADTK-GV--KRKTLFRENGSKPRAIVVDPVH----------------GF  215 (400)
T ss_dssp             SSCSCEEEEEEETTT-TEEEEEETTTTEEEEECTT-TC--SEEEEEECSSCCEEEEEEETTT----------------TE
T ss_pred             CCCCCcccEEEEecC-CceEEEECCCCeEEEEeCC-CC--ceEEEEeCCCCCcceEEEeccc----------------Ce
Confidence            223456788888743 4566666666777765542 11  1111111112224566776642                22


Q ss_pred             eEEEe-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762         190 RLVSG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD  268 (318)
Q Consensus       190 ~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~  268 (318)
                      .+.+- +..+.|...+++.......  ....-...+.|+++|+   .+.+..+=+....|...++.+.............
T Consensus       216 ly~td~~~~~~I~~~~~dG~~~~~~--~~~~l~~P~glavd~~---~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l  290 (400)
T 3p5b_L          216 MYWTDWGTPAKIKKGGLNGVDIYSL--VTENIQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL  290 (400)
T ss_dssp             EEEEECSSSCCEEEEETTSCSCEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTT
T ss_pred             EEEEeCCCCCEEEEEeCCCCccEEE--EECCCCceEEEEEEeC---CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCC
Confidence            33333 3346788888776432211  1223345789999986   3445555556778999988764322211111112


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      .....++.. .+..+.+-...+.|..++..++.....+
T Consensus       291 ~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i  327 (400)
T 3p5b_L          291 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL  327 (400)
T ss_dssp             SSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred             CCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence            345577773 4455555556677777775555444443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.35  E-value=0.078  Score=50.26  Aligned_cols=56  Identities=14%  Similarity=0.279  Sum_probs=32.6

Q ss_pred             CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCc-eE
Q psy2762         245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGA-WQ  304 (318)
Q Consensus       245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~-~~  304 (318)
                      ++.|.-||+.+.. .|+...    ..++++-.....|..+..++.|+.++.+|.+++.. |+
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~  509 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKME----RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK  509 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cCeEEEEECCCCCEEeEecC----CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence            4667777776543 232211    11222212223567777899999999999888653 44

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.33  E-value=0.061  Score=45.91  Aligned_cols=197  Identities=13%  Similarity=0.155  Sum_probs=101.3

Q ss_pred             CcEEEEEECC----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC------CeEEEEEeecCCCC
Q psy2762          80 GTLLASCSYD----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD------GTISFLTYMSDTNS  149 (318)
Q Consensus        80 ~~~las~s~D----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d------~~i~i~~~~~~~~~  149 (318)
                      +.+++.|+.+    ..+.++|+.+..+.....+......-..+.+  +  +.+++.|+.+      ..+.++|+  ....
T Consensus        56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~d~--~~~~  129 (306)
T 3ii7_A           56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--E--GKIYTSGGSEVGNSALYLFECYDT--RTES  129 (306)
T ss_dssp             TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--T--TEEEEECCBBTTBSCCCCEEEEET--TTTE
T ss_pred             CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--C--CEEEEECCCCCCCcEeeeEEEEeC--CCCc
Confidence            6777788765    6788899988877665444322222222222  3  5677777765      23455554  3333


Q ss_pred             cceeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecC---------CCeEEEEEccCCeEEEEEEcccC
Q psy2762         150 WESRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC---------DNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       150 ~~~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~---------d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      |....-.... .....+.+.                   ++.++.|+.         -..+.+||..++++.....+...
T Consensus       130 W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~  190 (306)
T 3ii7_A          130 WHTKPSMLTQRCSHGMVEAN-------------------GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA  190 (306)
T ss_dssp             EEEECCCSSCCBSCEEEEET-------------------TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC
T ss_pred             eEeCCCCcCCcceeEEEEEC-------------------CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch
Confidence            4321110000 000011110                   234555543         34588999998888665443322


Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcceeeEEeeecC-CcEEEEEEcCCCCEEEEEeCC----
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVTWTPFIMNTFD-DVVWNVSWSLTGDILTVSCGD----  289 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~~~~~~~~~~~-~~v~~v~~spdg~~l~s~~~D----  289 (318)
                      ...-..+.+      ++.+++.|+.+     ..+.+||.... .|......... .....+.+  ++++++.|+.+    
T Consensus       191 r~~~~~~~~------~~~i~v~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~  261 (306)
T 3ii7_A          191 RKNHGLVFV------KDKIFAVGGQNGLGGLDNVEYYDIKLN-EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR  261 (306)
T ss_dssp             CBSCEEEEE------TTEEEEECCEETTEEBCCEEEEETTTT-EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB
T ss_pred             hhcceEEEE------CCEEEEEeCCCCCCCCceEEEeeCCCC-cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee
Confidence            222222222      25677777654     35788888764 24321111111 11122222  67788778754    


Q ss_pred             -CeEEEEEECCCCceEEEeeecc
Q psy2762         290 -NSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       290 -~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                       ..+.+||..+ .+|..+..|..
T Consensus       262 ~~~~~~yd~~~-~~W~~~~~~~~  283 (306)
T 3ii7_A          262 LGHILEYNTET-DKWVANSKVRA  283 (306)
T ss_dssp             CCEEEEEETTT-TEEEEEEEEEC
T ss_pred             eeeEEEEcCCC-CeEEeCCCccc
Confidence             4677777544 58998877653

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.32  E-value=0.066  Score=46.09  Aligned_cols=186  Identities=8%  Similarity=0.043  Sum_probs=101.0

Q ss_pred             eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC------------------CCcCeEEEEeeCCCCCcEEE
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN------------------HDSSVNSIAWAPKEFGLILA  130 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~------------------h~~~v~~v~~~p~~~~~~la  130 (318)
                      ..+++|.+  +++++.++..++.|..|+..++.... +....                  ....+..+++.+++ +.+++
T Consensus        21 p~~i~~d~--~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~-g~l~v   96 (322)
T 2fp8_A           21 PNSFTFDS--TNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN-NQLYI   96 (322)
T ss_dssp             CCCEECCT--TCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT-TEEEE
T ss_pred             ceEEEEcC--CCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCC-CcEEE
Confidence            45677753  47778888889999999987654322 22111                  01247889999732 55554


Q ss_pred             EeecCCeEEEEEeecCCCCcceeeecc----c-ccccceeeeCC-CCCCCccccccCCCCCCccceEEEe-c--------
Q psy2762         131 CGSSDGTISFLTYMSDTNSWESRKIAA----H-TIGCNAVSWGP-GIGSLSELDLKGSKLGGVAKRLVSG-G--------  195 (318)
Q Consensus       131 sgs~d~~i~i~~~~~~~~~~~~~~~~~----h-~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~lasg-s--------  195 (318)
                      + ...+.|..++..  ..  ....+..    . ....+.++..| +                 +...++- +        
T Consensus        97 ~-d~~~~i~~~d~~--~g--~~~~~~~~~~~~~~~~p~~i~~d~~~-----------------G~l~v~d~~~~~~~~~~  154 (322)
T 2fp8_A           97 V-DCYYHLSVVGSE--GG--HATQLATSVDGVPFKWLYAVTVDQRT-----------------GIVYFTDVSTLYDDRGV  154 (322)
T ss_dssp             E-ETTTEEEEECTT--CE--ECEEEESEETTEECSCEEEEEECTTT-----------------CCEEEEESCSSCCTTCH
T ss_pred             E-ECCCCEEEEeCC--CC--EEEEecccCCCCcccccceEEEecCC-----------------CEEEEECCccccccccc
Confidence            4 333445555431  11  1111111    1 11235566666 4                 2222221 1        


Q ss_pred             --------CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         196 --------CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       196 --------~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                              .++.|..||..+++.....  .+ ....+.|+|+|+    +. ++++-...+.|.+++..............
T Consensus       155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~-~~~p~gia~~~d----g~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~  227 (322)
T 2fp8_A          155 QQIMDTSDKTGRLIKYDPSTKETTLLL--KE-LHVPGGAEVSAD----SSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK  227 (322)
T ss_dssp             HHHHHHTCCCEEEEEEETTTTEEEEEE--EE-ESCCCEEEECTT----SSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE
T ss_pred             ceehcccCCCceEEEEeCCCCEEEEec--cC-CccCcceEECCC----CCEEEEEeCCCCeEEEEECCCCcCCccceEEe
Confidence                    2366888887666432211  11 123468999996    55 44444567889999887532111111212


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeC
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      ... ...+++.++|++.++...
T Consensus       228 ~~g-P~gi~~d~~G~l~va~~~  248 (322)
T 2fp8_A          228 IPN-PGNIKRNADGHFWVSSSE  248 (322)
T ss_dssp             CSS-EEEEEECTTSCEEEEEEE
T ss_pred             CCC-CCCeEECCCCCEEEEecC
Confidence            233 678999999987766544

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.25  E-value=0.074  Score=45.29  Aligned_cols=199  Identities=17%  Similarity=0.285  Sum_probs=100.0

Q ss_pred             CcEEEEEECCC-----eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE---EEEEeecCCCCcc
Q psy2762          80 GTLLASCSYDR-----KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI---SFLTYMSDTNSWE  151 (318)
Q Consensus        80 ~~~las~s~Dg-----~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i---~i~~~~~~~~~~~  151 (318)
                      +.+++.|+.++     .+.++|+.+..+.....+......-..+.+  +  +.+++.|+.++.-   .+|-+....+.|.
T Consensus        62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~~~~W~  137 (302)
T 2xn4_A           62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--N--GLLYAVGGFDGSTGLSSVEAYNIKSNEWF  137 (302)
T ss_dssp             TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred             CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--C--CEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence            67777777653     588889888777655443322222222222  2  5677777765421   1233323333343


Q ss_pred             eeeecccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-------CeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762         152 SRKIAAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-------NLIKIWKQEGDKWIEETKLENHSDWV  223 (318)
Q Consensus       152 ~~~~~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-------~~i~iwd~~~~~~~~~~~~~~h~~~V  223 (318)
                      ...-.... .....+.+.                   ++.++.|+.+       ..+.+||..++++.....+......-
T Consensus       138 ~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~  198 (302)
T 2xn4_A          138 HVAPMNTRRSSVGVGVVG-------------------GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA  198 (302)
T ss_dssp             EECCCSSCCBSCEEEEET-------------------TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred             ecCCCCCcccCceEEEEC-------------------CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccc
Confidence            21111000 000011110                   2345555542       35889999988886654443322222


Q ss_pred             eEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC-----eEE
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN-----SVS  293 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~-----~v~  293 (318)
                      ..+.+      ++.+++.|+.++     .+.+||..+. .|...........-.++. ..+++.++.|+.++     .+.
T Consensus       199 ~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~  270 (302)
T 2xn4_A          199 GVGVL------NNLLYAVGGHDGPLVRKSVEVYDPTTN-AWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVE  270 (302)
T ss_dssp             EEEEE------TTEEEEECCBSSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEE
T ss_pred             cEEEE------CCEEEEECCCCCCcccceEEEEeCCCC-CEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEE
Confidence            22222      256777777653     5888888764 343211111111111122 22677777777653     478


Q ss_pred             EEEECCCCceEEEe-eec
Q psy2762         294 LWKENTDGAWQCIT-EMG  310 (318)
Q Consensus       294 iW~~~~~~~~~~~~-~~~  310 (318)
                      +||..+ ..|..+. .|.
T Consensus       271 ~yd~~~-~~W~~~~~~~~  287 (302)
T 2xn4_A          271 YYNPTT-DKWTVVSSCMS  287 (302)
T ss_dssp             EEETTT-TEEEECSSCCS
T ss_pred             EEcCCC-CeEEECCcccC
Confidence            888654 5898875 443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.20  E-value=0.065  Score=51.53  Aligned_cols=63  Identities=17%  Similarity=0.137  Sum_probs=39.3

Q ss_pred             CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEeccccc----------Ce-EEEEecCCCCCcEEEEEECCCeEE
Q psy2762          25 GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG----------PV-WQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        25 g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~----------~V-~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      +..|+.++.++.|.-+|..+           |+.+=.+.....          .+ ..+.+    .+..++.++.|+.|.
T Consensus        66 ~g~vyv~~~~~~v~AlD~~t-----------G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~v~~~dg~l~  130 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAAS-----------GKELWRYDPEVAKVKARTSCCDAVNRGVAL----WGDKVYVGTLDGRLI  130 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTT-----------CCEEEEECCCCCGGGGGGCTTCSCCCCCEE----EBTEEEEECTTSEEE
T ss_pred             CCEEEEECCCCeEEEEECCC-----------ChhceEECCCCCccccccccccCCccceEE----ECCEEEEEcCCCEEE
Confidence            45666677788898888763           344333322111          01 11222    246778888999999


Q ss_pred             EEeCCCCcE
Q psy2762          94 IWRGDNGNW  102 (318)
Q Consensus        94 vWd~~~~~~  102 (318)
                      .+|..+++.
T Consensus       131 alD~~tG~~  139 (668)
T 1kv9_A          131 ALDAKTGKA  139 (668)
T ss_dssp             EEETTTCCE
T ss_pred             EEECCCCCE
Confidence            999998874

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.17  E-value=0.17  Score=47.83  Aligned_cols=53  Identities=9%  Similarity=0.158  Sum_probs=32.7

Q ss_pred             CCeEEEEEcCCCc-ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         245 DRKVIIWTSNDYV-TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       245 D~~i~vw~~~~~~-~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      ++.|.-||+.+.. .|+...    ..+++.-.....|.++..++.|+.++.||.+++.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~  518 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKE----HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK  518 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEE----SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             cceEEEEECCCCCEEEEecC----CCCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence            5778888876643 233221    1122222222346678889999999999987765

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.16  E-value=0.053  Score=50.94  Aligned_cols=204  Identities=10%  Similarity=0.011  Sum_probs=107.4

Q ss_pred             CCcEEEEEEC-CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEe-e-CCCCCcEEEEee------------------cCCe
Q psy2762          79 FGTLLASCSY-DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAW-A-PKEFGLILACGS------------------SDGT  137 (318)
Q Consensus        79 ~~~~las~s~-Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~-~-p~~~~~~lasgs------------------~d~~  137 (318)
                      ||++|+.... +.+|.+-|+.+.++..+.+++. ....-.+++ + |+  +.++.+++                  .++.
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~  176 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVANYVNV  176 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCC--CcEEEEecccccccCCCCcccccccccCce
Confidence            4666666554 5679999999877655555542 234667787 4 77  44555553                  2346


Q ss_pred             EEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCC----------C---------------CCCccceEE
Q psy2762         138 ISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS----------K---------------LGGVAKRLV  192 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~----------~---------------~~~~~~~la  192 (318)
                      +.+.|.....-   ..++.--. ...-++.+|+............          .               .-..+++..
T Consensus       177 vtvID~~t~~v---~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~  252 (595)
T 1fwx_A          177 FTAVDADKWEV---AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  252 (595)
T ss_dssp             EEEEETTTTEE---EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             EEEEECCCCeE---EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence            66666532211   11121001 1233445554322111111000          0               000011111


Q ss_pred             EecCCCeEEEEEccC--CeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc---------ee
Q psy2762         193 SGGCDNLIKIWKQEG--DKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT---------WT  260 (318)
Q Consensus       193 sgs~d~~i~iwd~~~--~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~---------~~  260 (318)
                      .    +.|.|.|..+  +... ...+..- ....++.++|+    |+ .++++..+.+|.++|+.+...         ..
T Consensus       253 i----~~V~VID~~~~~~~~~-~~~Ipvg-~~PhGv~~sPD----Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~  322 (595)
T 1fwx_A          253 L----NGVKVVDGRKEASSLF-TRYIPIA-NNPHGCNMAPD----KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA  322 (595)
T ss_dssp             E----TTEEEEECSGGGCCSS-EEEEEEE-SSCCCEEECTT----SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred             E----CcEEEEeCcccCCcee-EEEEecC-CCceEEEEcCC----CCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence            1    4588999776  3210 1122111 12468999997    55 555555789999999885310         00


Q ss_pred             eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         261 PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       261 ~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      ...........+.++|+|||...++.--|++|..|+++.
T Consensus       323 v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          323 VVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             eEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            111112234678999999994344444699999999765

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.15  E-value=0.14  Score=46.46  Aligned_cols=209  Identities=9%  Similarity=0.055  Sum_probs=110.2

Q ss_pred             eEEEEecCC-CCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeec
Q psy2762          69 VWQVAWAHP-QFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMS  145 (318)
Q Consensus        69 V~~v~~~~~-~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~  145 (318)
                      -..++|.+. .++. |..+...+.|+.+|+.++....   +.........|++.++.  .++++.....  .-.++.+..
T Consensus       141 P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~---~~~~~~~P~giavd~dG--~lyVad~~~~~~~~gv~~~~~  214 (433)
T 4hw6_A          141 IWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDI---KTTNIGQCADVNFTLNG--DMVVVDDQSSDTNTGIYLFTR  214 (433)
T ss_dssp             CCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEE---ECCCCSCEEEEEECTTC--CEEEEECCSCTTSEEEEEECG
T ss_pred             CceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEE---eecCCCCccEEEECCCC--CEEEEcCCCCcccceEEEEEC
Confidence            457888531 1244 4444444889999987664322   22334568899999984  4555543211  111111111


Q ss_pred             CCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-EEEEEcccCCCCee
Q psy2762         146 DTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-IEETKLENHSDWVR  224 (318)
Q Consensus       146 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-~~~~~~~~h~~~V~  224 (318)
                      .. .+..............++++|..                +..+++-..++.|+.+|..++.. ...... +....-.
T Consensus       215 ~~-~~~~~~~~~~~~~P~giavd~~~----------------G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~  276 (433)
T 4hw6_A          215 AS-GFTERLSLCNARGAKTCAVHPQN----------------GKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNF  276 (433)
T ss_dssp             GG-TTCCEEEEEECSSBCCCEECTTT----------------CCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCE
T ss_pred             CC-CeeccccccccCCCCEEEEeCCC----------------CeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcc
Confidence            11 11100111111223456666631                34445555677899998876653 222222 2223345


Q ss_pred             EEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc--eeeEEeeec---------------CCcEEEEEE---------c
Q psy2762         225 DVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT--WTPFIMNTF---------------DDVVWNVSW---------S  277 (318)
Q Consensus       225 ~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~--~~~~~~~~~---------------~~~v~~v~~---------s  277 (318)
                      .++|+|+    +. +.++-.....|+.++......  ..+....+.               -.....+++         .
T Consensus       277 ~ia~dpd----G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd  352 (433)
T 4hw6_A          277 HIVWHPT----GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE  352 (433)
T ss_dssp             EEEECTT----SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred             cEEEeCC----CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence            7999997    55 556666678899987653110  001111110               123667999         7


Q ss_pred             CCCCEEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         278 LTGDILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       278 pdg~~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      ++|+++++=...+.|+.++  ..|...++.
T Consensus       353 ~~g~lyvaD~~n~~I~~~~--~~G~v~t~~  380 (433)
T 4hw6_A          353 DEYDFYFCDRDSHTVRVLT--PEGRVTTYA  380 (433)
T ss_dssp             CCEEEEEEETTTTEEEEEC--TTSEEEEEE
T ss_pred             CCCcEEEEECCCCEEEEEC--CCCCEEEEE
Confidence            7887776666667777775  566666554

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.06  E-value=0.17  Score=45.85  Aligned_cols=238  Identities=9%  Similarity=0.030  Sum_probs=123.4

Q ss_pred             eeeeeeecCC---CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC--
Q psy2762          15 MIHDAEMDYL---GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD--   89 (318)
Q Consensus        15 ~v~~~~~~~~---g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D--   89 (318)
                      ....++++|+   |+++++-. .+.|+.+|...           +. +.++.........+++++  +|+++++-...  
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~-~~~I~~id~~~-----------g~-v~~~~~~~~~P~giavd~--dG~lyVad~~~~~  204 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQ-RDAFRHVDFVN-----------QY-VDIKTTNIGQCADVNFTL--NGDMVVVDDQSSD  204 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECB-TSCEEEEETTT-----------TE-EEEECCCCSCEEEEEECT--TCCEEEEECCSCT
T ss_pred             CCceEEEccccCCCEEEEEeC-CCCEEEEECCC-----------CE-EEEeecCCCCccEEEECC--CCCEEEEcCCCCc
Confidence            3567889984   55555433 38899998752           33 334444445578899964  47744443211  


Q ss_pred             -Ce-EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec--cccccccee
Q psy2762          90 -RK-VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA--AHTIGCNAV  165 (318)
Q Consensus        90 -g~-v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~  165 (318)
                       .. +...+...+ ......+. .-.....+++.|++ +.++++-..++.|..++...+.  . ...+.  +.......+
T Consensus       205 ~~~gv~~~~~~~~-~~~~~~~~-~~~~P~giavd~~~-G~lyv~d~~~~~V~~~d~~~g~--~-~~~~~~~~~~~~~~~i  278 (433)
T 4hw6_A          205 TNTGIYLFTRASG-FTERLSLC-NARGAKTCAVHPQN-GKIYYTRYHHAMISSYDPATGT--L-TEEEVMMDTKGSNFHI  278 (433)
T ss_dssp             TSEEEEEECGGGT-TCCEEEEE-ECSSBCCCEECTTT-CCEEECBTTCSEEEEECTTTCC--E-EEEEEECSCCSSCEEE
T ss_pred             ccceEEEEECCCC-eecccccc-ccCCCCEEEEeCCC-CeEEEEECCCCEEEEEECCCCe--E-EEEEeccCCCCCcccE
Confidence             22 222232221 11001111 12334667888842 5566665566777666542111  1 01111  111112358


Q ss_pred             eeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--CeEEEEEEccc---------------CCCCeeEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--DKWIEETKLEN---------------HSDWVRDVA  227 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~~~~~~~~~~~---------------h~~~V~~v~  227 (318)
                      +++|+                 +. .+++-...+.|+.++.+.  +.+.....+.+               .-.....++
T Consensus       279 a~dpd-----------------G~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~gia  341 (433)
T 4hw6_A          279 VWHPT-----------------GDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGI  341 (433)
T ss_dssp             EECTT-----------------SSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEE
T ss_pred             EEeCC-----------------CCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEE
Confidence            88886                 33 455556677888877652  22110001111               112356688


Q ss_pred             E---------ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee------------------cCCcEEEEEEc-CC
Q psy2762         228 W---------APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT------------------FDDVVWNVSWS-LT  279 (318)
Q Consensus       228 ~---------sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~------------------~~~~v~~v~~s-pd  279 (318)
                      +         .+    .+.++++=.....|+.++.....    ..+.+                  .-.....|+++ ++
T Consensus       342 v~~n~~y~~dd~----~g~lyvaD~~n~~I~~~~~~G~v----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~  413 (433)
T 4hw6_A          342 FVKNEAYAGEED----EYDFYFCDRDSHTVRVLTPEGRV----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR  413 (433)
T ss_dssp             EEECGGGTTSSC----CEEEEEEETTTTEEEEECTTSEE----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred             EEccccccccCC----CCcEEEEECCCCEEEEECCCCCE----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence            8         44    36666666667788888754311    11110                  01246799999 67


Q ss_pred             CCEEEEEeCCCeEEEEEEC
Q psy2762         280 GDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       280 g~~l~s~~~D~~v~iW~~~  298 (318)
                      |.++++=...+.||..+.+
T Consensus       414 g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          414 KCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TEEEEEEGGGTEEEEEEEC
T ss_pred             CEEEEEeCCCCEEEEEecC
Confidence            7766655567788877653

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.01  E-value=0.29  Score=47.81  Aligned_cols=245  Identities=11%  Similarity=0.021  Sum_probs=135.0

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ...|.++..+++|.+.+ |+.++-|..|+....         .-......    ......|.++...  .+|. |..|+.
T Consensus       309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~---------~~~~~~~~~~~~~l~~~~V~~i~~d--~~g~-lWiGt~  375 (795)
T 4a2l_A          309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRN---------RFKNIRNIPYKNSLSDNVVSCIVED--KDKN-LWIGTN  375 (795)
T ss_dssp             SSCEEEEEECTTSCEEE-EESSSCEEEECGGGG---------SSEEECCCTTSSSCSCSSEEEEEEC--TTSC-EEEEES
T ss_pred             CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcc---------cceEEcCCCCCCCCCCCeeEEEEEC--CCCC-EEEEEC
Confidence            35789999999998765 666777888876421         00111100    0124568888764  2344 566788


Q ss_pred             CCeEEEEeCCCCcEEEEEEec------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc-----
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYN------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA-----  157 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~-----  157 (318)
                      ++-+..|+..++.......-.      .....|.++...++  +.++-.|+.++-|..++...+.    ...+..     
T Consensus       376 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~~----~~~~~~~~~~l  449 (795)
T 4a2l_A          376 DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSGQ----VENFNQRNSQL  449 (795)
T ss_dssp             SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT--TTEEEEEETTTEEEEEETTTCC----EEEECTTTSCC
T ss_pred             CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCCc----EEEeecCCCCc
Confidence            878888998766543321100      12356888887765  5534556766667777643221    111110     


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEc----ccCCCCeeEEEEccCCC
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKL----ENHSDWVRDVAWAPSWG  233 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~----~~h~~~V~~v~~sp~~~  233 (318)
                      +...|.++...++                 +. |-.|+. +.|.+||..++++......    .-....|+++...++  
T Consensus       450 ~~~~v~~i~~d~~-----------------g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~--  508 (795)
T 4a2l_A          450 VNENVYAILPDGE-----------------GN-LWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH--  508 (795)
T ss_dssp             SCSCEEEEEECSS-----------------SC-EEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT--
T ss_pred             CCCeeEEEEECCC-----------------CC-EEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCC--
Confidence            1123444443332                 22 444444 4588899887754322111    112356899988875  


Q ss_pred             CCccEEEEEeCCCeEEEEEcCCCcceeeE---Eee-ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         234 LSKCMIASCSQDRKVIIWTSNDYVTWTPF---IMN-TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       234 ~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---~~~-~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                        +.+.+.. . +-|..|+..+... ...   ... -....|.++...++|++.+++. . .+..|+... +++..
T Consensus       509 --g~lWigt-~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~-~~~~~  576 (795)
T 4a2l_A          509 --KRLWIGG-E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKD-KQIKR  576 (795)
T ss_dssp             --CCEEEEE-S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTT-TEEEE
T ss_pred             --CCEEEEe-C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCC-CcEEE
Confidence              5555443 3 4478888755321 100   000 1235799999999998765443 3 567777433 34443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.98  E-value=0.15  Score=43.94  Aligned_cols=232  Identities=11%  Similarity=-0.022  Sum_probs=124.7

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC---cEEEEEEecC
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG---NWFKYYEYNN  110 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~---~~~~~~~~~~  110 (318)
                      ...|+..|++..           .....+. ......++.|.+ ..+.++.+-...+.|..+++...   ..... .+..
T Consensus         9 ~~~I~~i~~~~~-----------~~~~~~~-~~~~p~g~~~d~-~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-~~~~   74 (316)
T 1ijq_A            9 RHEVRKMTLDRS-----------EYTSLIP-NLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-VISR   74 (316)
T ss_dssp             BSSEEEEETTSC-----------CCEEEEC-SCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEE-EECS
T ss_pred             CCeEEEEECCCc-----------ceEehhc-CCCceEEEEEEe-CCCEEEEEECCCCcEEEEECCCCCCCcccEE-EEeC
Confidence            357888888632           1222222 234567899864 33556666666789999987751   11111 1222


Q ss_pred             CCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccc
Q psy2762         111 HDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK  189 (318)
Q Consensus       111 h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~  189 (318)
                      .-.....+++.+.. +.++.+-...+.|.+.+.. +.   ....+. ........++..|..                +.
T Consensus        75 ~~~~p~glavd~~~-~~ly~~d~~~~~I~~~~~~-g~---~~~~~~~~~~~~P~~iavdp~~----------------g~  133 (316)
T 1ijq_A           75 DIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADTK-GV---KRKTLFRENGSKPRAIVVDPVH----------------GF  133 (316)
T ss_dssp             SCSCCCEEEEETTT-TEEEEEETTTTEEEEEETT-SS---SEEEEEECTTCCEEEEEEETTT----------------TE
T ss_pred             CCCCcCEEEEeecC-CeEEEEECCCCEEEEEeCC-CC---ceEEEEECCCCCcceEEeCCCC----------------CE
Confidence            22345788888653 4556665667788777642 11   111111 111234566666642                22


Q ss_pred             eEEEecC-CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecC
Q psy2762         190 RLVSGGC-DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFD  268 (318)
Q Consensus       190 ~lasgs~-d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~  268 (318)
                      .+.+... .+.|...+++.......  ....-...+.|+++|+   .+.+..+-+..+.|..++..+.............
T Consensus       134 ly~~d~~~~~~I~~~~~dG~~~~~~--~~~~~~~P~gla~d~~---~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~  208 (316)
T 1ijq_A          134 MYWTDWGTPAKIKKGGLNGVDIYSL--VTENIQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL  208 (316)
T ss_dssp             EEEEECSSSCEEEEEETTSCCEEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTT
T ss_pred             EEEEccCCCCeEEEEcCCCCCeEEE--EECCCCCceEEEEecc---CCEEEEEECCCCeEEEEecCCCceEEEeecCCcc
Confidence            3333333 36788888765432111  1222345789999986   3555566566788999998753321111111112


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         269 DVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      .....+++. .+..+.+-...+.|...+..++...+.+
T Consensus       209 ~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i  245 (316)
T 1ijq_A          209 AHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL  245 (316)
T ss_dssp             SSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             CCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence            345678885 4556666666778888775555444443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.95  E-value=0.15  Score=43.54  Aligned_cols=114  Identities=20%  Similarity=0.291  Sum_probs=63.6

Q ss_pred             ceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCcc
Q psy2762         189 KRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYVT  258 (318)
Q Consensus       189 ~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~~  258 (318)
                      ..++.|+.+     +.+.+||..++++.....+......-..+.+      ++.+++.|+.+     ..+.+||+.+. .
T Consensus       170 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~~~-~  242 (308)
T 1zgk_A          170 LLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL------HNCIYAAGGYDGQDQLNSVERYDVETE-T  242 (308)
T ss_dssp             EEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCSSSBCCCEEEEETTTT-E
T ss_pred             EEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE------CCEEEEEeCCCCCCccceEEEEeCCCC-c
Confidence            455666654     4588999988888655443322222223333      25677777765     45888888764 3


Q ss_pred             eeeEEeeecCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEEECCCCceEEEeeecc
Q psy2762         259 WTPFIMNTFDDVVWNVSWSLTGDILTVSCGD-----NSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       259 ~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D-----~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      |...........-.++.. -++++++.|+.+     ..+.++|..+ .+|..+..|-.
T Consensus       243 W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~  298 (308)
T 1zgk_A          243 WTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT-DTWSEVTRMTS  298 (308)
T ss_dssp             EEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSS
T ss_pred             EEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC-CEEeecCCCCC
Confidence            432111111111112222 267777777754     3567777554 68998877654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.90  E-value=0.37  Score=47.13  Aligned_cols=230  Identities=7%  Similarity=0.040  Sum_probs=123.3

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-----ccccCeEEEEecCCCCCcEEEEEE
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-----GHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...|.++...++|++|-.|+.++-|.+||...           +. ...+.     .....|.++...  .+|.+.+ |+
T Consensus       405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-----------~~-~~~~~~~~~~l~~~~v~~i~~d--~~g~lwi-gt  469 (795)
T 4a2l_A          405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-----------GQ-VENFNQRNSQLVNENVYAILPD--GEGNLWL-GT  469 (795)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTEEEEEETTT-----------CC-EEEECTTTSCCSCSCEEEEEEC--SSSCEEE-EE
T ss_pred             CccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-----------Cc-EEEeecCCCCcCCCeeEEEEEC--CCCCEEE-Ee
Confidence            35788898889998444567777789998752           22 22222     234578888864  3466444 44


Q ss_pred             CCCeEEEEeCCCCcEEEEEEe----cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee--e--cccc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEY----NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK--I--AAHT  159 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~--~--~~h~  159 (318)
                      .+ -+.+||..++........    ......|.++...++  +.+.+ |+.+| +..++.....  .....  .  ....
T Consensus       470 ~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~--g~lWi-gt~~G-l~~~~~~~~~--~~~~~~~~~~~l~~  542 (795)
T 4a2l_A          470 LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH--KRLWI-GGEEG-LSVFKQEGLD--IQKASILPVSNVTK  542 (795)
T ss_dssp             SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT--CCEEE-EESSC-EEEEEEETTE--EEECCCSCSCGGGG
T ss_pred             cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCC--CCEEE-EeCCc-eEEEeCCCCe--EEEecCCCCCCCCC
Confidence            54 477788876643322111    112356888887776  54444 34444 6666653321  10000  0  0112


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC-CCCeeEEEEccCCCCCccE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH-SDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~~~  238 (318)
                      ..+.++...++                 +. |-.|+.. .|..||..++++.......+- ...|.++...++    |.+
T Consensus       543 ~~i~~i~~d~~-----------------g~-lWigT~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~----g~l  599 (795)
T 4a2l_A          543 LFTNCIYEASN-----------------GI-IWVGTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSF----GRL  599 (795)
T ss_dssp             SCEEEEEECTT-----------------SC-EEEEESS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTT----SCE
T ss_pred             CeeEEEEECCC-----------------CC-EEEEeCC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCC----CCE
Confidence            23444444443                 23 3334444 578888877654332222222 345888888774    555


Q ss_pred             EEEEeCCCeEEEEEcCCCcceeeEEee---ecC-CcE--EEEEEcCCCCEEEEEeCCCeEE
Q psy2762         239 IASCSQDRKVIIWTSNDYVTWTPFIMN---TFD-DVV--WNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~~~~~~~~~---~~~-~~v--~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      .+++ . +-|..|+..+..   .....   +.. ..+  .++...++|++++ |+.+|-++
T Consensus       600 Wi~t-~-~Gl~~~~~~~~~---~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~Gl~~  654 (795)
T 4a2l_A          600 WLST-N-RGISCFNPETEK---FRNFTESDGLQSNQFNTASYCRTSVGQMYF-GGINGITT  654 (795)
T ss_dssp             EEEE-T-TEEEEEETTTTE---EEEECGGGTCSCSCEEEEEEEECTTSCEEE-EETTEEEE
T ss_pred             EEEc-C-CceEEEcCCCCc---EEEcCCcCCCccccCccCceeECCCCeEEE-ecCCceEE
Confidence            5544 3 457778876532   11111   111 122  5677788998765 55566443

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.78  E-value=0.15  Score=43.32  Aligned_cols=189  Identities=12%  Similarity=0.129  Sum_probs=95.0

Q ss_pred             CCCEEEEeeCC----CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC------CeEE
Q psy2762          24 LGLYLATCSSD----HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD------RKVI   93 (318)
Q Consensus        24 ~g~~l~s~s~D----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D------g~v~   93 (318)
                      ++.+++.||.+    ..+.+||....         ....+..+......-..+.+    ++++++.|+.+      ..+.
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~  121 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKD---------SWYSKLGPPTPRDSLAACAA----EGKIYTSGGSEVGNSALYLFE  121 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTT---------EEEEEECCSSCCBSCEEEEE----TTEEEEECCBBTTBSCCCCEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCC---------eEEECCCCCccccceeEEEE----CCEEEEECCCCCCCcEeeeEE
Confidence            56667777755    56777877522         23333332211111122222    36777888776      4688


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC---------eEEEEEeecCCCCcceeeecccc-cccc
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG---------TISFLTYMSDTNSWESRKIAAHT-IGCN  163 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~---------~i~i~~~~~~~~~~~~~~~~~h~-~~v~  163 (318)
                      +||+.+..+.....+......-.++.+  +  +.+++.|+.++         .+.++|+  ....|....-.... ....
T Consensus       122 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~  195 (306)
T 3ii7_A          122 CYDTRTESWHTKPSMLTQRCSHGMVEA--N--GLIYVCGGSLGNNVSGRVLNSCEVYDP--ATETWTELCPMIEARKNHG  195 (306)
T ss_dssp             EEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEECCEESCTTTCEECCCEEEEET--TTTEEEEECCCSSCCBSCE
T ss_pred             EEeCCCCceEeCCCCcCCcceeEEEEE--C--CEEEEECCCCCCCCcccccceEEEeCC--CCCeEEECCCccchhhcce
Confidence            899988877655333322122222222  2  46677766432         2445554  33334322110000 0000


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      .+.. .                  ++.++.|+.+     ..+.+||..++++.....+.........+.+      ++.+
T Consensus       196 ~~~~-~------------------~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i  250 (306)
T 3ii7_A          196 LVFV-K------------------DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV------GSIV  250 (306)
T ss_dssp             EEEE-T------------------TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE------TTEE
T ss_pred             EEEE-C------------------CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE------CCEE
Confidence            1111 0                  2456666653     3588999998888665444333222233333      2567


Q ss_pred             EEEEeCC-----CeEEEEEcCCC
Q psy2762         239 IASCSQD-----RKVIIWTSNDY  256 (318)
Q Consensus       239 l~s~s~D-----~~i~vw~~~~~  256 (318)
                      ++.|+.+     ..+.+||....
T Consensus       251 ~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          251 YVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EEEECBCSSSBCCEEEEEETTTT
T ss_pred             EEEeCcCCCeeeeeEEEEcCCCC
Confidence            7888754     45778887663

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.70  E-value=0.52  Score=46.14  Aligned_cols=212  Identities=11%  Similarity=-0.052  Sum_probs=111.8

Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE--EEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW--FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT  142 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~  142 (318)
                      ....+.+++|.. ..+.++++-...+.|..+++.....  .....+...-.....|++.+.. +.++.+-...+.|.+.+
T Consensus       422 ~~~~~~gl~~d~-~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~-~~LY~tD~~~~~I~v~~  499 (791)
T 3m0c_C          422 NLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD  499 (791)
T ss_dssp             SCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT-TEEEEEETTTTEEEEEE
T ss_pred             CCCceEEEeecc-cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC-CcEEEEecCCCeEEEEe
Confidence            345677888864 3456666666678888888764211  0111122223446678888764 45666666777887776


Q ss_pred             eecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762         143 YMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       143 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      +. +.   ....+. ........+++.|..                +..+.+- +..+.|.+.+++.......  +...-
T Consensus       500 ld-G~---~~~~l~~~~l~~P~gIaVDp~~----------------g~LYwtD~g~~~~I~~~~~dG~~~~~l--v~~~l  557 (791)
T 3m0c_C          500 TK-GV---KRKTLFRENGSKPRAIVVDPVH----------------GFMYWTDWGTPAKIKKGGLNGVDIYSL--VTENI  557 (791)
T ss_dssp             TT-SS---SEEEEEECTTCCEEEEEEETTT----------------TEEEEEECSSSCEEEEEETTSCCEEEE--ECSSC
T ss_pred             CC-CC---eEEEEEeCCCCCcceEEEecCC----------------CCEEEecCCCCCeEEEEecCCCceEEE--EeCCC
Confidence            52 11   111221 222234567777642                2223332 3336788888876543222  22333


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      .+.+.|+++|.   .+.+.++=.....|...++.+.....  ....  ......+|++.. ++++++-...+.|..-+..
T Consensus       558 ~~P~GLavD~~---~~~LYwaD~~~~~I~~~d~dG~~~~~--v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~  631 (791)
T 3m0c_C          558 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKT--ILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL  631 (791)
T ss_dssp             SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEE--EEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred             CCceEEEEecC---CCeEEEEeCCCCcEEEEecCCCceEE--EecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence            56789999986   35555554556788888886644221  2221  122345777642 3344444445666555544


Q ss_pred             CCCceEEE
Q psy2762         299 TDGAWQCI  306 (318)
Q Consensus       299 ~~~~~~~~  306 (318)
                      .+.....+
T Consensus       632 tG~~~~~l  639 (791)
T 3m0c_C          632 TGSDVNLL  639 (791)
T ss_dssp             TCCCCEEE
T ss_pred             CCcceEEe
Confidence            44444444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.65  E-value=0.31  Score=42.74  Aligned_cols=198  Identities=14%  Similarity=0.113  Sum_probs=104.9

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCC--CCCc---E-EEEEEC--CCeEEEE
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHP--QFGT---L-LASCSY--DRKVIIW   95 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~--~~~~---~-las~s~--Dg~v~vW   95 (318)
                      ...+++.....+-+.|||+.            |+.+..+..  +.++.+...+.  -.|+   + ++|.-.  +.+|.++
T Consensus        39 ~~s~ii~t~k~~gL~Vydl~------------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf  104 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSLD------------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY  104 (355)
T ss_dssp             GGCEEEEEETTTEEEEEETT------------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred             CccEEEEEcCCCCEEEEcCC------------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence            44566666777899999995            467777753  45666655310  0011   2 333333  5799999


Q ss_pred             eC--CCCcEEEEEEe--c-CCC-cCeEEEEe--eCCCCCcEEEEeecCCeEEEEEeecCCC-Ccc---eeeecccccccc
Q psy2762          96 RG--DNGNWFKYYEY--N-NHD-SSVNSIAW--APKEFGLILACGSSDGTISFLTYMSDTN-SWE---SRKIAAHTIGCN  163 (318)
Q Consensus        96 d~--~~~~~~~~~~~--~-~h~-~~v~~v~~--~p~~~~~~lasgs~d~~i~i~~~~~~~~-~~~---~~~~~~h~~~v~  163 (318)
                      ++  .++........  + ... ..++.+++  +|.....++.....++.+..|++..... ...   ++.+.. ...+.
T Consensus       105 ~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~E  183 (355)
T 3amr_A          105 AIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTE  183 (355)
T ss_dssp             EECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEE
T ss_pred             EECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcc
Confidence            66  34332111000  0 011 45666777  6653234566777889998888754321 111   122211 12233


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc-----CCeEEEEEEc--ccCCCCeeEEEEccCCCCCc
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE-----GDKWIEETKL--ENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~-----~~~~~~~~~~--~~h~~~V~~v~~sp~~~~~~  236 (318)
                      .+...+.                 ..+|..+-+|..|..++.+     +++.  ...+  ..-...+..|..-+.....+
T Consensus       184 gcvvDd~-----------------~g~Lyv~eEd~GIw~~da~p~~~~~~~~--v~~~~~g~l~aDvEGLai~~~~~g~g  244 (355)
T 3amr_A          184 GMAADDE-----------------YGRLYIAEEDEAIWKFSAEPDGGSNGTV--IDRADGRHLTRDIEGLTIYYAADGKG  244 (355)
T ss_dssp             EEEEETT-----------------TTEEEEEETTTEEEEEECSTTSCSCCEE--EEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred             eEEEcCC-----------------CCeEEEecccceEEEEeCCcCCCCCceE--EEEecCCccccCcceEEEEecCCCCE
Confidence            4444443                 2468888898665555533     1222  2222  22234688888854311113


Q ss_pred             cEEEEEeCCCeEEEEEcCC
Q psy2762         237 CMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       237 ~~l~s~s~D~~i~vw~~~~  255 (318)
                      .+|+|+-.+.+..||+.+.
T Consensus       245 yLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          245 YLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             EEEEEEGGGTEEEEEESST
T ss_pred             EEEEEcCCCCEEEEEECCC
Confidence            3455554678999999863

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.56  E-value=0.33  Score=42.13  Aligned_cols=223  Identities=9%  Similarity=0.105  Sum_probs=121.3

Q ss_pred             ecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCC----C--cCeEEEEe---eCCCCCcEEEEe
Q psy2762          62 LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNH----D--SSVNSIAW---APKEFGLILACG  132 (318)
Q Consensus        62 ~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h----~--~~v~~v~~---~p~~~~~~lasg  132 (318)
                      +......-.+++|. +..+.+++|.-+.++|..|+...+....+ .+.+-    .  ..+..|.|   .|+  +.++++.
T Consensus         8 ~~~~~~yPE~~~wd-~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~--grL~vv~   83 (334)
T 2p9w_A            8 VKVKNLTPEDTIYD-RTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNS--KRLFAVM   83 (334)
T ss_dssp             ECCTTCCCSCEEEE-TTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSC--CEEEEEE
T ss_pred             ecCcccCCcCccCc-CCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCC--CcEEEEE
Confidence            33444445578885 34566666666899999999875543333 34321    1  13578999   566  6677654


Q ss_pred             ec-------------CCeEEEEEee---cCCCCcceeeecccc-----------cccceeeeCCCCCCCccccccCCCCC
Q psy2762         133 SS-------------DGTISFLTYM---SDTNSWESRKIAAHT-----------IGCNAVSWGPGIGSLSELDLKGSKLG  185 (318)
Q Consensus       133 s~-------------d~~i~i~~~~---~~~~~~~~~~~~~h~-----------~~v~~~~~~p~~~~~~~~~~~~~~~~  185 (318)
                      ..             +..|..+|+.   .++..+. ..+....           ..++.++..++               
T Consensus        84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~---------------  147 (334)
T 2p9w_A           84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRD---------------  147 (334)
T ss_dssp             EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTT---------------
T ss_pred             cccccccccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCC---------------
Confidence            32             5667777764   2332221 1111111           13556666654               


Q ss_pred             CccceEEEecCC-CeEEEEEccCCeEEEEE-Ec--ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceee
Q psy2762         186 GVAKRLVSGGCD-NLIKIWKQEGDKWIEET-KL--ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTP  261 (318)
Q Consensus       186 ~~~~~lasgs~d-~~i~iwd~~~~~~~~~~-~~--~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~  261 (318)
                        ++..++++.- +.|...+.+........ ..  .......+.|.++|+    +..|+....++.|..+|+.....+..
T Consensus       148 --GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pd----g~~Liv~~~~g~L~~fD~~~pv~~~v  221 (334)
T 2p9w_A          148 --GNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPH----SNKLIAFGGPRALTAFDVSKPYAWPE  221 (334)
T ss_dssp             --SCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETT----TTEEEEESSSSSEEEEECSSSSCCCE
T ss_pred             --CCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCC----CCEEEEEcCCCeEEEEcCCCCcceee
Confidence              4556666666 66666665544221111 11  111223579999996    65566555599999999875432111


Q ss_pred             EEee--e---cCCcEEE-EEEcCCCCE-EEEEeCCCeEEEEEECCCCceEEEeeeccccc
Q psy2762         262 FIMN--T---FDDVVWN-VSWSLTGDI-LTVSCGDNSVSLWKENTDGAWQCITEMGKTSE  314 (318)
Q Consensus       262 ~~~~--~---~~~~v~~-v~~spdg~~-l~s~~~D~~v~iW~~~~~~~~~~~~~~~~~~~  314 (318)
                      . +.  +   .-...-. +.--.+|+. |++.+..+.+.+-  ..++ |+....++....
T Consensus       222 ~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~--S~Dg-W~sa~~~g~~~~  277 (334)
T 2p9w_A          222 P-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFR--SWDN-WKSANIKKTKRS  277 (334)
T ss_dssp             E-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEE--CSST-TSEEEEEEEECG
T ss_pred             c-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEE--CCCC-cceeEEeeeecC
Confidence            1 11  1   1111222 233347888 5555556554443  3344 998888877654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.53  E-value=0.66  Score=45.18  Aligned_cols=247  Identities=10%  Similarity=0.017  Sum_probs=128.0

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEE----ecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAE----LKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ...|+++...++|.+.+ |...+-|.++|............ .-..+..    .......|.++...  .+| .|-.|..
T Consensus       257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~-~f~~~~~~~~~~~l~~~~v~~i~~D--~~g-~lWigt~  331 (781)
T 3v9f_A          257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQI-RFEFIREGDNNYSLSNASARYIFQD--SFN-NIWIGTW  331 (781)
T ss_dssp             CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC----------CEEECBCSSTTSBSSSCEEEEEEC--SSC-CEEEEEB
T ss_pred             CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeecc-ccccccCCCCCCCCCCCeEEEEEEe--CCC-CEEEEec
Confidence            34688888888888666 45545677888752200000000 0000000    01234568888764  234 4667777


Q ss_pred             CCeEEEEeCCCCcEEEEEEe-------cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec----c
Q psy2762          89 DRKVIIWRGDNGNWFKYYEY-------NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA----A  157 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~-------~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~----~  157 (318)
                      ++-|..++............       ......|.++...++  +.+ -.|+.++-|..++....    ......    .
T Consensus       332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g~l-Wigt~~~Gl~~~~~~~~----~~~~~~~~~~~  404 (781)
T 3v9f_A          332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQ--GKL-WIGTDGGGINVFENGKR----VAIYNKENREL  404 (781)
T ss_dssp             SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTT--SCE-EEEEBSSCEEEEETTEE----EEECC-----C
T ss_pred             CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCC--CCE-EEEeCCCcEEEEECCCC----eEEEccCCCCC
Confidence            77888888776543222100       012346888887765  443 34565555666653211    111110    0


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~  237 (318)
                      ....|.++...++                 + .|-.|+.++.|..+|..++++............|.++...++    +.
T Consensus       405 ~~~~v~~i~~d~~-----------------g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~----g~  462 (781)
T 3v9f_A          405 LSNSVLCSLKDSE-----------------G-NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN----KK  462 (781)
T ss_dssp             CCSBEEEEEECTT-----------------S-CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT----SE
T ss_pred             CCcceEEEEECCC-----------------C-CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC----CC
Confidence            1122334433322                 2 355577767788898876654221110123456888888774    55


Q ss_pred             EEEEEeCCCeEEEEEcCCCcceeeEEee----ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         238 MIASCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~~~~~~~~~~----~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +.+ +.. +-|.+++..+... ......    .....|.++...++|++.+.+..+| |..++.
T Consensus       463 lwi-gt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~  522 (781)
T 3v9f_A          463 IWI-GTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTP  522 (781)
T ss_dssp             EEE-EET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECT
T ss_pred             EEE-EEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeC
Confidence            444 444 4588888765431 111110    0135799999999998765443344 555653

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.50  E-value=0.011  Score=57.29  Aligned_cols=202  Identities=11%  Similarity=-0.032  Sum_probs=100.8

Q ss_pred             cCeEEEEecCCCCCcEEEEEECCCeEEEEeCCC----CcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEE
Q psy2762          67 GPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDN----GNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT  142 (318)
Q Consensus        67 ~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~----~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~  142 (318)
                      ..+.+++|.+ ..+.++++-...+.|..+++..    .....  .+...-.....|++.+.. +.++++-...+.|.+.+
T Consensus       406 ~~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~--~i~~~~~~P~glavD~~~-g~LY~tD~~~~~I~v~d  481 (699)
T 1n7d_A          406 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD  481 (699)
T ss_dssp             TTCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCC--BCCSCC--CCCEECCCSS-SBCEECCTTTSCEEEEB
T ss_pred             cceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEE--EEeCCCCCcceEEEEeeC-CcEEEEeccCCeEEEEe
Confidence            3456778853 2344555544567888888764    11101  111111234567777543 44555555566777765


Q ss_pred             eecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCC
Q psy2762         143 YMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHS  220 (318)
Q Consensus       143 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~  220 (318)
                      ....    ....+. ........+++.|..+                ..+++- +..+.|.+++++......  .....-
T Consensus       482 ~dg~----~~~~l~~~~~~~P~giavDp~~g----------------~ly~td~~~~~~I~~~~~dG~~~~~--l~~~~l  539 (699)
T 1n7d_A          482 TKGV----KRKTLFREQGSKPRAIVVDPVHG----------------FMYWTDWGTPAKIKKGGLNGVDIYS--LVTENI  539 (699)
T ss_dssp             SSSC----CEEEECCCSSCCCCCEECCSSSS----------------CCEECCCSSSCCEEBCCSSSCCCCE--ESCSSC
T ss_pred             cCCC----ceEEEEeCCCCCcceEEEccCCC----------------cEEEcccCCCCeEEEEeCCCCCeeE--EEeCCC
Confidence            4211    111111 1112235566666422                222322 223677777765432111  111223


Q ss_pred             CCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       221 ~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ...+.|+|+|+   .+.++++-+..+.|.++++.+....  ....  ........+++..+ .++++....+.|..++..
T Consensus       540 ~~PnGlavd~~---~~~LY~aD~~~~~I~~~d~dG~~~~--~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~  613 (699)
T 1n7d_A          540 QWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL  613 (699)
T ss_dssp             SSCCCEEECTT---TCCEEEEETTTTEEEEECSSSSCCE--EECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred             CCccEEEEecc---CCEEEEEecCCCeEEEEccCCCceE--EEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence            34678999986   3556666667788999988653321  1111  11122345666544 455555566788877744


Q ss_pred             CC
Q psy2762         299 TD  300 (318)
Q Consensus       299 ~~  300 (318)
                      ++
T Consensus       614 ~G  615 (699)
T 1n7d_A          614 TG  615 (699)
T ss_dssp             TE
T ss_pred             CC
Confidence            43

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.49  E-value=0.041  Score=49.46  Aligned_cols=124  Identities=12%  Similarity=0.121  Sum_probs=79.4

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCC-CcceEEEEecc------cccCeEEEEecCCC--CCcEEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS-QKGTLIAELKG------HSGPVWQVAWAHPQ--FGTLLAS   85 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~-~~~~~~~~~~~------h~~~V~~v~~~~~~--~~~~las   85 (318)
                      .|..+.+||+|++||..+ +.+|.|-.+..+.......+ ......+++.-      ...+|..+.| ||-  .+..|+.
T Consensus        67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlW-HPl~~~ds~LVV  144 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLF-HPKSYRDSCIVV  144 (452)
T ss_dssp             TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEE-CTTBGGGCEEEE
T ss_pred             ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEe-ccccCCCCeEEE
Confidence            467799999999999876 67999999863211111100 01112344443      2467999999 663  2568999


Q ss_pred             EECCCeEEEEeCCCCcEEEE--------EEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEE
Q psy2762          86 CSYDRKVIIWRGDNGNWFKY--------YEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF  140 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~~~--------~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i  140 (318)
                      --.|++|++||+......++        +.+......|.+++|.++.-..++++.+.+|-|.-
T Consensus       145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred             EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence            99999999999875321122        11222335788999999754456655667777753

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.44  E-value=0.35  Score=40.96  Aligned_cols=189  Identities=19%  Similarity=0.250  Sum_probs=92.1

Q ss_pred             CCCEEEEeeCCC-----cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-----eEE
Q psy2762          24 LGLYLATCSSDH-----TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-----KVI   93 (318)
Q Consensus        24 ~g~~l~s~s~D~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-----~v~   93 (318)
                      ++.+++.||.++     .+.+||....         ....+..+......-..+.+    ++.+++.|+.++     .+.
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~  127 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKD---------QWTSVANMRDRRSTLGAAVL----NGLLYAVGGFDGSTGLSSVE  127 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTT---------EEEEECCCSSCCBSCEEEEE----TTEEEEEEEECSSCEEEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCC---------ceeeCCCCCccccceEEEEE----CCEEEEEcCCCCCccCceEE
Confidence            566666777553     4777776521         22333222211111122222    367777787664     577


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-------eEEEEEeecCCCCcceeeeccc-cccccee
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-------TISFLTYMSDTNSWESRKIAAH-TIGCNAV  165 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-------~i~i~~~~~~~~~~~~~~~~~h-~~~v~~~  165 (318)
                      ++|+.+..+.....+........++.+  +  +.+++.|+.++       .+.++|+  ....|....-... ......+
T Consensus       128 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~~~  201 (302)
T 2xn4_A          128 AYNIKSNEWFHVAPMNTRRSSVGVGVV--G--GLLYAVGGYDVASRQCLSTVECYNA--TTNEWTYIAEMSTRRSGAGVG  201 (302)
T ss_dssp             EEETTTTEEEEECCCSSCCBSCEEEEE--T--TEEEEECCEETTTTEECCCEEEEET--TTTEEEEECCCSSCCBSCEEE
T ss_pred             EEeCCCCeEeecCCCCCcccCceEEEE--C--CEEEEEeCCCCCCCccccEEEEEeC--CCCcEEECCCCccccccccEE
Confidence            888888777655433322222222222  2  46777776532       2445554  3333432111100 0000111


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIA  240 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~  240 (318)
                      .+.                   +..++.|+.+     +.+.+||..++++.....+......-..+.+      ++.+++
T Consensus       202 ~~~-------------------~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~------~~~i~v  256 (302)
T 2xn4_A          202 VLN-------------------NLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV------NGLLYV  256 (302)
T ss_dssp             EET-------------------TEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEE
T ss_pred             EEC-------------------CEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE------CCEEEE
Confidence            111                   2456667654     3688999998888665443322221122222      256777


Q ss_pred             EEeCCC-----eEEEEEcCCC
Q psy2762         241 SCSQDR-----KVIIWTSNDY  256 (318)
Q Consensus       241 s~s~D~-----~i~vw~~~~~  256 (318)
                      .|+.++     .+.+||..+.
T Consensus       257 ~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          257 VGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             ECCBCSSSBCCCEEEEETTTT
T ss_pred             ECCcCCCcccccEEEEcCCCC
Confidence            777654     3777877653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=96.38  E-value=0.49  Score=42.00  Aligned_cols=180  Identities=8%  Similarity=-0.036  Sum_probs=98.9

Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceee
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVS  166 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~  166 (318)
                      ....|+..++........  +.. ...+..++|.+.+ +.++.+-...+.|..++.....    ...+. ........++
T Consensus        94 ~~~~I~~i~~~~~~~~~~--~~~-~~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~~----~~~~~~~~~~~p~gla  165 (386)
T 3v65_B           94 NRIDIRQVLPHRSEYTLL--LNN-LENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSN----VEEVVSTGLESPGGLA  165 (386)
T ss_dssp             CBSCEEEECTTSCCCEEE--ECS-CSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCC----EEEEECSSCSCCCCEE
T ss_pred             cCccceeeccCCCcEEEE--ecC-CCccEEEEEecCC-CeEEEEeCCCCcEEEEecCCCC----cEEEEeCCCCCccEEE
Confidence            346677788776543332  222 3457889999864 5566665566777666542111    11111 1111234455


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-  245 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-  245 (318)
                      +.+..                +..+++-...+.|.+.+++.....  ..+.......+.|++.|.   .+.++.+-... 
T Consensus       166 vd~~~----------------g~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~P~giavdp~---~g~ly~td~~~~  224 (386)
T 3v65_B          166 VDWVH----------------DKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPM---EGTIYWTDWGNT  224 (386)
T ss_dssp             EETTT----------------TEEEEEETTTTEEEECBTTSCSCE--EEECSSCSCEEEEEEETT---TTEEEEEECSSS
T ss_pred             EEeCC----------------CeEEEEcCCCCeEEEEeCCCCceE--EeecCCCCCCcEEEEEcC---CCeEEEeccCCC
Confidence            55421                244556666678888887654321  112233345689999986   35555555444 


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEEC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKEN  298 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~  298 (318)
                      +.|...+......  .............++|+|++..|.-+- ..+.|+.++.+
T Consensus       225 ~~I~r~~~dG~~~--~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d  276 (386)
T 3v65_B          225 PRIEASSMDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD  276 (386)
T ss_dssp             CEEEEEETTSCSC--EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred             CEEEEEeCCCCCc--EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence            6788777765331  112222234578999998766665553 45566666543

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=96.37  E-value=0.83  Score=44.50  Aligned_cols=236  Identities=11%  Similarity=0.036  Sum_probs=125.2

Q ss_pred             cceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          13 EDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ...|.++...++|.+.+ |+.++-|.+||...           +. ...+    ......|.++...  .++. |..|..
T Consensus       362 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~-----------~~-~~~~~~~~~~~~~~v~~i~~d--~~g~-lWigt~  425 (781)
T 3v9f_A          362 NKVVSSVCDDGQGKLWI-GTDGGGINVFENGK-----------RV-AIYNKENRELLSNSVLCSLKD--SEGN-LWFGTY  425 (781)
T ss_dssp             SSCEEEEEECTTSCEEE-EEBSSCEEEEETTE-----------EE-EECC-----CCCSBEEEEEEC--TTSC-EEEEET
T ss_pred             CcceEEEEEcCCCCEEE-EeCCCcEEEEECCC-----------Ce-EEEccCCCCCCCcceEEEEEC--CCCC-EEEEec
Confidence            35688898888888665 55566688888642           11 1111    1234678888764  2355 455777


Q ss_pred             CCeEEEEeCCCCcEEEEEEe-cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc----cccccc
Q psy2762          89 DRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA----HTIGCN  163 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~----h~~~v~  163 (318)
                      ++-+..++..+++... +.. ......|.++...++  +.+. .|+.. -+..++.....  +.......    ....+.
T Consensus       426 ~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~--g~lw-igt~~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~  498 (781)
T 3v9f_A          426 LGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKN--KKIW-IGTHA-GVFVIDLASKK--VIHHYDTSNSQLLENFVR  498 (781)
T ss_dssp             TEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTT--SEEE-EEETT-EEEEEESSSSS--CCEEECTTTSSCSCSCEE
T ss_pred             cCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCC--CCEE-EEECC-ceEEEeCCCCe--EEecccCcccccccceeE
Confidence            7778888877664322 111 113457888877765  5444 34444 46666643221  11110000    012334


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-CCCCeeEEEEccCCCCCccEEEEE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-HSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      ++...++                 + .|-.|+.++-|..||.+++++.......+ ....|.++...++    |.+.++ 
T Consensus       499 ~i~~d~~-----------------g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~----g~lWi~-  555 (781)
T 3v9f_A          499 SIAQDSE-----------------G-RFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSK----GQMWLA-  555 (781)
T ss_dssp             EEEECTT-----------------C-CEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTT----SCEEEE-
T ss_pred             EEEEcCC-----------------C-CEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCC----CCEEEE-
Confidence            4443332                 2 34455554457778877665432211111 2346888888774    555544 


Q ss_pred             eCCCeEEEEEcCCCcceeeEEeeec-CCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy2762         243 SQDRKVIIWTSNDYVTWTPFIMNTF-DDVVWNVSWSLTGDILTVSCGDNSVSLWK  296 (318)
Q Consensus       243 s~D~~i~vw~~~~~~~~~~~~~~~~-~~~v~~v~~spdg~~l~s~~~D~~v~iW~  296 (318)
                      ..+|-+..|+..+..........+. ...|.++...++|++.+++ .+| +..++
T Consensus       556 T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~  608 (781)
T 3v9f_A          556 TGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYI  608 (781)
T ss_dssp             ETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEE
T ss_pred             ECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEE
Confidence            3466547887765431100000111 2357889999999876544 444 55555

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.35  E-value=0.56  Score=42.35  Aligned_cols=157  Identities=9%  Similarity=0.073  Sum_probs=87.7

Q ss_pred             eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC----eEEEEEee
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG----TISFLTYM  144 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~----~i~i~~~~  144 (318)
                      ...+++++ .++..|..+...+.|+.+|+..+.....   .........|+|+++. ..++++...++    .+.+.+. 
T Consensus       139 P~~lavdp-~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~~-  212 (430)
T 3tc9_A          139 AVWLSFDP-KNHNHLYLVGEQHPTRLIDFEKEYVSTV---YSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILTR-  212 (430)
T ss_dssp             CCEEEEET-TEEEEEEEEEBTEEEEEEETTTTEEEEE---ECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEEG-
T ss_pred             CCEEEECC-CCCCeEEEEeCCCcEEEEECCCCEEEEE---ecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEeC-
Confidence            35677752 1134455555558888899876543222   2234567899999983 22555544322    2222221 


Q ss_pred             cCCCCcc-eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762         145 SDTNSWE-SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV  223 (318)
Q Consensus       145 ~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V  223 (318)
                      ...  +. ...+. .......++++|+.                +..+++-..++.|+.++..++.......... ....
T Consensus       213 ~g~--~~~~~~l~-~~~~p~giavdp~~----------------g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P  272 (430)
T 3tc9_A          213 ESG--FKVITELT-KGQNCNGAETHPIN----------------GELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWE  272 (430)
T ss_dssp             GGT--SCSEEEEE-ECSSCCCEEECTTT----------------CCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCC
T ss_pred             CCc--eeeeeeec-cCCCceEEEEeCCC----------------CEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcc
Confidence            111  11 11111 12234566777732                3455666677889999988765423333322 2446


Q ss_pred             eEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCC
Q psy2762         224 RDVAWAPSWGLSKC-MIASCSQDRKVIIWTSND  255 (318)
Q Consensus       224 ~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~  255 (318)
                      +.|+|+|+    +. ++++-.....|..++...
T Consensus       273 ~gia~~pd----G~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          273 FHIQFHPS----GNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             EEEEECTT----SSEEEEEETTTTEEEEEEEET
T ss_pred             eeEEEcCC----CCEEEEEECCCCEEEEEeCCc
Confidence            78999996    55 556666778899987653

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.29  E-value=0.42  Score=40.37  Aligned_cols=189  Identities=14%  Similarity=0.191  Sum_probs=95.0

Q ss_pred             CCCEEEEeeCC-----CcEEEEEcCCCcCCCCCCCCc---ceEEEEecccccCeEEEEecCCCCCcEEEEEECCC-----
Q psy2762          24 LGLYLATCSSD-----HTVKVFNLDRNLKKDDSHSQK---GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR-----   90 (318)
Q Consensus        24 ~g~~l~s~s~D-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg-----   90 (318)
                      ++.+++.||.+     ..+.+||....         .   ...+..+......-..+.+    ++++++.|+.++     
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~---------~~~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~  128 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTAD---------EDGVWYSVAPMNVRRGLAGATTL----GDMIYVSGGFDGSRRHT  128 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCC---------TTCCCEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSCBCC
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCC---------CCCeeEECCCCCCCccceeEEEE----CCEEEEEcccCCCcccc
Confidence            56677777755     45778887532         2   3333222211111112222    367777777543     


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecCCCCcceeeecccc-cccce
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSDTNSWESRKIAAHT-IGCNA  164 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~~~~~~~~~~~~h~-~~v~~  164 (318)
                      .+.++|+.+..+.....+......-.++.+  +  +.+++.|+.++     .+.++|+  ....|....-.... .....
T Consensus       129 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~  202 (301)
T 2vpj_A          129 SMERYDPNIDQWSMLGDMQTAREGAGLVVA--S--GVIYCLGGYDGLNILNSVEKYDP--HTGHWTNVTPMATKRSGAGV  202 (301)
T ss_dssp             EEEEEETTTTEEEEEEECSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEET--TTTEEEEECCCSSCCBSCEE
T ss_pred             eEEEEcCCCCeEEECCCCCCCcccceEEEE--C--CEEEEECCCCCCcccceEEEEeC--CCCcEEeCCCCCcccccceE
Confidence            688889888877665544322222222222  3  56777777653     3445554  33334321110000 00011


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      +.+.                   ++.++.|+.+     +.+.+||..++++.....+.........+.+      ++.++
T Consensus       203 ~~~~-------------------~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i~  257 (301)
T 2vpj_A          203 ALLN-------------------DHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL------RGRLY  257 (301)
T ss_dssp             EEET-------------------TEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEE
T ss_pred             EEEC-------------------CEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE------CCEEE
Confidence            1111                   2456667664     4689999998888665444322222222222      25677


Q ss_pred             EEEeCC-----CeEEEEEcCCC
Q psy2762         240 ASCSQD-----RKVIIWTSNDY  256 (318)
Q Consensus       240 ~s~s~D-----~~i~vw~~~~~  256 (318)
                      +.|+.+     ..+.+||.+..
T Consensus       258 v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          258 AIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             EECCBCSSSBEEEEEEEETTTT
T ss_pred             EEcCcCCCcccccEEEEcCCCC
Confidence            777765     34677777653

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.06  E-value=0.041  Score=53.22  Aligned_cols=205  Identities=8%  Similarity=-0.074  Sum_probs=101.7

Q ss_pred             eeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      .+..++|++.+..|+- -...+.|+.++++....       .......+.........+++.. ..+.++++-...+.|.
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~-------~~~~~~~i~~~~~~P~glavD~-~~g~LY~tD~~~~~I~  478 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-------VSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTVS  478 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC--------CCCCCBCCSCC--CCCEECCC-SSSBCEECCTTTSCEE
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCC-------CcceEEEEeCCCCCcceEEEEe-eCCcEEEEeccCCeEE
Confidence            4556788876555544 34567888888763100       0000111111112234566542 2356666655678899


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI  171 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~  171 (318)
                      +.++.......+  +.........|++.|.. +.++.+-... +.|...++. +..   ...+. ......+.++++|+.
T Consensus       479 v~d~dg~~~~~l--~~~~~~~P~giavDp~~-g~ly~td~~~~~~I~~~~~d-G~~---~~~l~~~~l~~PnGlavd~~~  551 (699)
T 1n7d_A          479 VADTKGVKRKTL--FREQGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN-GVD---IYSLVTENIQWPNGITLDLLS  551 (699)
T ss_dssp             EEBSSSCCEEEE--CCCSSCCCCCEECCSSS-SCCEECCCSSSCCEEBCCSS-SCC---CCEESCSSCSSCCCEEECTTT
T ss_pred             EEecCCCceEEE--EeCCCCCcceEEEccCC-CcEEEcccCCCCeEEEEeCC-CCC---eeEEEeCCCCCccEEEEeccC
Confidence            998875532222  22222345778898864 4444443222 455544321 111   11111 111224567787753


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      +..+++-+..+.|..+++....................|++..     +.++++....+.|..+
T Consensus       552 ----------------~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~-----~~lywtd~~~~~V~~~  610 (699)
T 1n7d_A          552 ----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSA  610 (699)
T ss_dssp             ----------------CCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET-----TEEEEECSTTTCEEEE
T ss_pred             ----------------CEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC-----CEEEEEeCCCCeEEEE
Confidence                            2344555666789999886543222211111112234555543     3556666667888888


Q ss_pred             EcCC
Q psy2762         252 TSND  255 (318)
Q Consensus       252 ~~~~  255 (318)
                      +..+
T Consensus       611 d~~~  614 (699)
T 1n7d_A          611 NRLT  614 (699)
T ss_dssp             ETTT
T ss_pred             EccC
Confidence            7643

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.03  E-value=0.61  Score=39.77  Aligned_cols=112  Identities=14%  Similarity=0.273  Sum_probs=59.9

Q ss_pred             ceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC-----eEEEEEcCCCc
Q psy2762         189 KRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR-----KVIIWTSNDYV  257 (318)
Q Consensus       189 ~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~-----~i~vw~~~~~~  257 (318)
                      +.++.|+.      -+.+.+||..++++.....+......-..+.+      ++.+++.|+.++     .+.+||..+. 
T Consensus       150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~-  222 (315)
T 4asc_A          150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH------DGRIIVAAGVTDTGLTSSAEVYSITDN-  222 (315)
T ss_dssp             EEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEEEEECSSSEEEEEEEEETTTT-
T ss_pred             EEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE------CCEEEEEeccCCCCccceEEEEECCCC-
Confidence            45566665      24688999998888665444322222222222      256777787654     4778888664 


Q ss_pred             ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCC--------------eEEEEEECCCCceEEEeee
Q psy2762         258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDN--------------SVSLWKENTDGAWQCITEM  309 (318)
Q Consensus       258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~--------------~v~iW~~~~~~~~~~~~~~  309 (318)
                      .|...........-.++. .-++++++.|+.++              .+.++|..+ .+|..+...
T Consensus       223 ~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~  286 (315)
T 4asc_A          223 KWAPFEAFPQERSSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEE-KKWEGVLRE  286 (315)
T ss_dssp             EEEEECCCSSCCBSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT-TEEEEEESC
T ss_pred             eEEECCCCCCcccceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCC-ChhhhhccC
Confidence            353321111111111222 22677777777642              345565443 589988443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=95.94  E-value=0.7  Score=39.66  Aligned_cols=205  Identities=8%  Similarity=-0.066  Sum_probs=109.6

Q ss_pred             eeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEE
Q psy2762          15 MIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVI   93 (318)
Q Consensus        15 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~   93 (318)
                      ....++|++.+. +..+-...+.|..++++...       ........+.........+++.. ..+.++++-...+.|.
T Consensus        31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~-------~~~~~~~~~~~~~~~p~glavd~-~~~~ly~~d~~~~~I~  102 (316)
T 1ijq_A           31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAH-------GVSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTVS  102 (316)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEEC---------------CEEEECSSCSCCCEEEEET-TTTEEEEEETTTTEEE
T ss_pred             ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCC-------CCcccEEEEeCCCCCcCEEEEee-cCCeEEEEECCCCEEE
Confidence            356788987654 55555567889888876210       00011112222223456777653 2355556656778999


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGI  171 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~  171 (318)
                      +.+..........  ...-.....+++.|.+ +.++.+.... +.|...+. .+..   ...+. ..-...+.++++|+.
T Consensus       103 ~~~~~g~~~~~~~--~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~~~~-dG~~---~~~~~~~~~~~P~gla~d~~~  175 (316)
T 1ijq_A          103 VADTKGVKRKTLF--RENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGL-NGVD---IYSLVTENIQWPNGITLDLLS  175 (316)
T ss_dssp             EEETTSSSEEEEE--ECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEET-TSCC---EEEEECSSCSCEEEEEEETTT
T ss_pred             EEeCCCCceEEEE--ECCCCCcceEEeCCCC-CEEEEEccCCCCeEEEEcC-CCCC---eEEEEECCCCCceEEEEeccC
Confidence            9998754432222  2223457899999864 5555554333 55655443 1111   11111 111234567777652


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      +..+.+-+..+.|..+|++...................+++..     +.++.+-...+.|..+
T Consensus       176 ----------------~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-----~~ly~~d~~~~~V~~~  234 (316)
T 1ijq_A          176 ----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFSA  234 (316)
T ss_dssp             ----------------TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-----TEEEEEETTTTEEEEE
T ss_pred             ----------------CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-----CEEEEEECCCCeEEEE
Confidence                            2344555666789999987643222222211223356777742     5566666677888888


Q ss_pred             EcCC
Q psy2762         252 TSND  255 (318)
Q Consensus       252 ~~~~  255 (318)
                      +..+
T Consensus       235 ~~~~  238 (316)
T 1ijq_A          235 NRLT  238 (316)
T ss_dssp             ETTT
T ss_pred             eCCC
Confidence            7643

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=95.85  E-value=0.66  Score=38.70  Aligned_cols=204  Identities=12%  Similarity=0.071  Sum_probs=116.0

Q ss_pred             CCCcceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-cccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-HSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .|=.+.+..++++|++..|++ ...++.|...|..            +++++++.- -......+++..  ++.++++.-
T Consensus        23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~------------g~v~~~i~l~g~~D~EGIa~~~--~g~~~vs~E   88 (255)
T 3qqz_A           23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN------------GDLIRTIPLDFVKDLETIEYIG--DNQFVISDE   88 (255)
T ss_dssp             TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT------------CCEEEEEECSSCSSEEEEEECS--TTEEEEEET
T ss_pred             CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC------------CCEEEEEecCCCCChHHeEEeC--CCEEEEEEC
Confidence            355568999999998776655 5556666666653            456665532 124567788753  466656544


Q ss_pred             CCCeEEEEeCCCCcE---EEEEEec----CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeec--CCCCcceeee---
Q psy2762          88 YDRKVIIWRGDNGNW---FKYYEYN----NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMS--DTNSWESRKI---  155 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~---~~~~~~~----~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~--~~~~~~~~~~---  155 (318)
                      .++.+.++++.....   .....+.    ........|++.|.. +.++++. ......+|.+.-  ......+...   
T Consensus        89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-~~L~va~-E~~p~~i~~~~g~~~~~~l~i~~~~~~  166 (255)
T 3qqz_A           89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQD-HTFWFFK-EKNPIEVYKVNGLLSSNELHISKDKAL  166 (255)
T ss_dssp             TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTT-TEEEEEE-ESSSEEEEEEESTTCSSCCEEEECHHH
T ss_pred             CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCC-CEEEEEE-CcCCceEEEEcccccCCceeeecchhh
Confidence            567888887654331   1222221    123456899999984 3445444 333455665531  1111111100   


Q ss_pred             c--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc-cCC------CCeeEE
Q psy2762         156 A--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE-NHS------DWVRDV  226 (318)
Q Consensus       156 ~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~-~h~------~~V~~v  226 (318)
                      .  .+......++++|..                ++.++...+.+.|-++|.+.. ......+. +..      ..-..|
T Consensus       167 ~~~~~~~d~S~l~~dp~t----------------g~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGi  229 (255)
T 3qqz_A          167 QRQFTLDDVSGAEFNQQK----------------NTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGV  229 (255)
T ss_dssp             HHTCCSSCCCEEEEETTT----------------TEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEE
T ss_pred             ccccccCCceeEEEcCCC----------------CeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCee
Confidence            0  122245667777742                567888888899999998765 34444554 211      235789


Q ss_pred             EEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         227 AWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                      +|.|+    |. |..+|+-..+.++
T Consensus       230 a~d~~----G~-lyIvsE~n~~y~f  249 (255)
T 3qqz_A          230 AMDAS----GN-IYIVSEPNRFYRF  249 (255)
T ss_dssp             EECTT----CC-EEEEETTTEEEEE
T ss_pred             EECCC----CC-EEEEcCCceEEEE
Confidence            99996    55 4444676644444

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=95.75  E-value=0.8  Score=38.90  Aligned_cols=145  Identities=14%  Similarity=0.214  Sum_probs=72.4

Q ss_pred             CcEEEEEECC-----CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-----eEEEEEeecCCCC
Q psy2762          80 GTLLASCSYD-----RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-----TISFLTYMSDTNS  149 (318)
Q Consensus        80 ~~~las~s~D-----g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-----~i~i~~~~~~~~~  149 (318)
                      +++++.|+.+     ..+.++|+.+..+.....+......-.++.+  +  +.+++.|+.++     .+.++|+  ....
T Consensus       122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~--~~~~  195 (308)
T 1zgk_A          122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--N--RLLYAVGGFDGTNRLNSAECYYP--ERNE  195 (308)
T ss_dssp             TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--T--TEEEEECCBCSSCBCCCEEEEET--TTTE
T ss_pred             CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--C--CEEEEEeCCCCCCcCceEEEEeC--CCCe
Confidence            5677777654     3678889888776554333322222222222  2  56777777653     3445554  3333


Q ss_pred             cceeeeccc-ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCC-----CeEEEEEccCCeEEEEEEcccCCCCe
Q psy2762         150 WESRKIAAH-TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD-----NLIKIWKQEGDKWIEETKLENHSDWV  223 (318)
Q Consensus       150 ~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~i~iwd~~~~~~~~~~~~~~h~~~V  223 (318)
                      |....-... ......+.+.                   +..++.|+.+     ..+.+||+.++++.....+......-
T Consensus       196 W~~~~~~p~~r~~~~~~~~~-------------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~  256 (308)
T 1zgk_A          196 WRMITAMNTIRSGAGVCVLH-------------------NCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL  256 (308)
T ss_dssp             EEECCCCSSCCBSCEEEEET-------------------TEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred             EeeCCCCCCccccceEEEEC-------------------CEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence            332111000 0000111110                   2456666654     46899999988886554433222222


Q ss_pred             eEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCC
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSND  255 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~  255 (318)
                      ..+..      ++.+++.|+.+     ..+.+||..+
T Consensus       257 ~~~~~------~~~i~v~GG~~~~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          257 GITVH------QGRIYVLGGYDGHTFLDSVECYDPDT  287 (308)
T ss_dssp             EEEEE------TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             EEEEE------CCEEEEEcCcCCCcccceEEEEcCCC
Confidence            22222      25677777754     3466777655

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.67  E-value=1  Score=39.42  Aligned_cols=102  Identities=16%  Similarity=0.117  Sum_probs=56.3

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec---ccccCeEEEEecCCC---CCcEEEEEEC
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK---GHSGPVWQVAWAHPQ---FGTLLASCSY   88 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~---~h~~~V~~v~~~~~~---~~~~las~s~   88 (318)
                      .-..++|.|+|+++++ ..++.|.+++ + .         ....+..+.   ........++|. |.   .+.+.++-..
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~-g---------~~~~~~~~~v~~~g~~~p~gia~~-pdf~~~g~lYv~~~~   98 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR-E-G---------RLSTYAELSVYHRGESGLLGLALH-PRFPQEPYVYAYRTV   98 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE-T-T---------EEEEEEECCCCCSTTCSEEEEEEC-TTTTTSCEEEEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE-C-C---------CccEeecceEeecCCCCceeEEEC-CCCCCCCEEEEEEec
Confidence            4567999999997765 5569999887 3 2         112222222   123456788985 32   2444444443


Q ss_pred             C-----CeEEEEeCCCCcE---EEEE-Eec---CCCcCeEEEEeeCCCCCcEEEE
Q psy2762          89 D-----RKVIIWRGDNGNW---FKYY-EYN---NHDSSVNSIAWAPKEFGLILAC  131 (318)
Q Consensus        89 D-----g~v~vWd~~~~~~---~~~~-~~~---~h~~~v~~v~~~p~~~~~~las  131 (318)
                      .     ..|..++...+..   ..+. .+.   ........++|.|+  +.++++
T Consensus        99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd--G~Lyv~  151 (352)
T 2ism_A           99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD--GMLYVT  151 (352)
T ss_dssp             CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT--SCEEEE
T ss_pred             CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC--CCEEEE
Confidence            2     5677777654321   1111 233   11123468999998  445554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=95.40  E-value=1.2  Score=38.43  Aligned_cols=233  Identities=7%  Similarity=-0.043  Sum_probs=123.8

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS  113 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~  113 (318)
                      ...|+..+++...       .....  .+. ....+.++.|.. ..+.++.+-...+.|..+++..+...... +...-.
T Consensus        12 ~~~I~~i~l~~~~-------~~~~~--~~~-~~~~~~~ld~d~-~~~~lyw~D~~~~~I~r~~~~g~~~~~~~-~~~~l~   79 (318)
T 3sov_A           12 RRDLRLVDATNGK-------ENATI--VVG-GLEDAAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQNV-VVSGLL   79 (318)
T ss_dssp             EEEEEEEETTCTT-------SCCEE--EEE-EEEEEEEEEEEG-GGTEEEEEETTTTEEEEEETTSSSCCCEE-EEECCS
T ss_pred             cCeEEEEECCCCc-------eEEEE--Eec-CCCccEEEEEEe-CCCEEEEEECCCCcEEEEEccCCCceEEE-EcCCCC
Confidence            4678888886320       00111  111 223466888864 34666666666788988988765311111 111123


Q ss_pred             CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEE
Q psy2762         114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS  193 (318)
Q Consensus       114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las  193 (318)
                      ....+++.+.. +.++.+-...+.|.+.+.. +..  ....+.........++..|..                +..+.+
T Consensus        80 ~p~glavd~~~-g~ly~~d~~~~~I~~~~~d-G~~--~~~l~~~~~~~P~giavdp~~----------------g~ly~t  139 (318)
T 3sov_A           80 SPDGLACDWLG-EKLYWTDSETNRIEVSNLD-GSL--RKVLFWQELDQPRAIALDPSS----------------GFMYWT  139 (318)
T ss_dssp             CCCEEEEETTT-TEEEEEETTTTEEEEEETT-SCS--CEEEECSSCSSEEEEEEEGGG----------------TEEEEE
T ss_pred             CccEEEEEcCC-CeEEEEECCCCEEEEEECC-CCc--EEEEEeCCCCCccEEEEeCCC----------------CEEEEE
Confidence            45678888753 4566665666777777642 111  111111111223455666532                222333


Q ss_pred             e-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEE
Q psy2762         194 G-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVW  272 (318)
Q Consensus       194 g-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~  272 (318)
                      - +..+.|...+++.......  ....-..-+.|+++|+   .+.+..+=+..+.|..++..+....  ...........
T Consensus       140 d~~~~~~I~r~~~dG~~~~~~--~~~~l~~Pnglavd~~---~~~lY~aD~~~~~I~~~d~dG~~~~--~~~~~~~~~P~  212 (318)
T 3sov_A          140 DWGEVPKIERAGMDGSSRFII--INSEIYWPNGLTLDYE---EQKLYWADAKLNFIHKSNLDGTNRQ--AVVKGSLPHPF  212 (318)
T ss_dssp             ECSSSCEEEEEETTSCSCEEE--ECSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCE--EEECSCCSCEE
T ss_pred             ecCCCCEEEEEEcCCCCeEEE--EECCCCCccEEEEecc---CCEEEEEECCCCEEEEEcCCCCceE--EEecCCCCCce
Confidence            2 3457788888765432111  1222344689999996   3555565566788999988753321  11221234456


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         273 NVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       273 ~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      .+++. .+..+.+-...+.|...+..++...+.+
T Consensus       213 glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i  245 (318)
T 3sov_A          213 ALTLF-EDILYWTDWSTHSILACNKYTGEGLREI  245 (318)
T ss_dssp             EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             EEEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence            77775 3445555556778888876555544443

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.39  E-value=1.2  Score=38.56  Aligned_cols=42  Identities=12%  Similarity=0.280  Sum_probs=22.7

Q ss_pred             eEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         199 LIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       199 ~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      .+.+||+.+++|.....+......-.++.+      ++.+++.||.+.
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~i~v~GG~~~  327 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW------NNSLLIIGGETA  327 (357)
T ss_dssp             CCEEEECC---CEEEEECSSCCBSSEEEEE------TTEEEEEEEECG
T ss_pred             eEEEEecCCCceeeCCCCCCCcccceeEEe------CCEEEEEeeeCC
Confidence            477899988888766555443332223322      256777787653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.21  E-value=1.4  Score=38.46  Aligned_cols=66  Identities=11%  Similarity=0.050  Sum_probs=38.6

Q ss_pred             CeeEEEEccCCC---CCccEEEEEeCCCeEEEEEcCCCccee-eEE-eeecCCcEEEEEEcCCCCEEEEEe
Q psy2762         222 WVRDVAWAPSWG---LSKCMIASCSQDRKVIIWTSNDYVTWT-PFI-MNTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       222 ~V~~v~~sp~~~---~~~~~l~s~s~D~~i~vw~~~~~~~~~-~~~-~~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                      ....+.|.....   ..+.++++.-..+.|...++....... ... +......+..+++.|||.++++..
T Consensus       260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            356777742110   136677766667778887776432111 111 112234688999999998776653

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.06  E-value=1.5  Score=37.93  Aligned_cols=210  Identities=9%  Similarity=0.063  Sum_probs=112.1

Q ss_pred             CCcceeeeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc----ccc--CeEEEEec-CCCCCcE
Q psy2762          11 GHEDMIHDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG----HSG--PVWQVAWA-HPQFGTL   82 (318)
Q Consensus        11 gH~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~----h~~--~V~~v~~~-~~~~~~~   82 (318)
                      +..-.-.+++|++ ++.++++.-..++|..||....         .-..+ .+.+    ...  .+..+.|. |+.++.+
T Consensus        10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---------~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL   79 (334)
T 2p9w_A           10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---------SHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRL   79 (334)
T ss_dssp             CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTC---------CEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEE
T ss_pred             CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---------eEEEE-ecCCccccCCCcceeeEEEEeccCCCCcE
Confidence            4455667789976 4555555558999999997521         11112 2322    111  24688882 1123677


Q ss_pred             EEEEE-------------CCCeEEEEeCC---CCcEEEEEEecCC-----------CcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          83 LASCS-------------YDRKVIIWRGD---NGNWFKYYEYNNH-----------DSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        83 las~s-------------~Dg~v~vWd~~---~~~~~~~~~~~~h-----------~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      ++...             .+..|..+|+.   +++......+...           ....+.++..++  +...++++.-
T Consensus        80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~--GnaYVt~s~~  157 (334)
T 2p9w_A           80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD--GNSYVAFALG  157 (334)
T ss_dssp             EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT--SCEEEEEEES
T ss_pred             EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC--CCEEEeCCCC
Confidence            77543             26789999988   5554333333321           124788888887  6677777777


Q ss_pred             -CeEEEEEeecCCCCcceeeec----ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE
Q psy2762         136 -GTISFLTYMSDTNSWESRKIA----AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW  210 (318)
Q Consensus       136 -~~i~i~~~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~  210 (318)
                       +.|...+  .+-+......+.    ....+.+.++++|+                 ++.|+.....+.|..+|+.....
T Consensus       158 ~~~I~rV~--pdG~~~~~~~~~~~~~~~~~G~nGIv~~pd-----------------g~~Liv~~~~g~L~~fD~~~pv~  218 (334)
T 2p9w_A          158 MPAIARVS--ADGKTVSTFAWESGNGGQRPGYSGITFDPH-----------------SNKLIAFGGPRALTAFDVSKPYA  218 (334)
T ss_dssp             SCEEEEEC--TTSCCEEEEEECCCCSSSCCSCSEEEEETT-----------------TTEEEEESSSSSEEEEECSSSSC
T ss_pred             CCeEEEEe--CCCCEEeeeeecCCCcccccCcceEEEeCC-----------------CCEEEEEcCCCeEEEEcCCCCcc
Confidence             6654433  222111111111    11223567788886                 34555554589999999774211


Q ss_pred             EEEEEcc--cC---CCCeeEEEEccCCCCCccE-EEEEeCCCeEEEEEcCC
Q psy2762         211 IEETKLE--NH---SDWVRDVAWAPSWGLSKCM-IASCSQDRKVIIWTSND  255 (318)
Q Consensus       211 ~~~~~~~--~h---~~~V~~v~~sp~~~~~~~~-l~s~s~D~~i~vw~~~~  255 (318)
                      . .....  +.   -.....+  .|.. .+|+. |++.+..+.+.+.+...
T Consensus       219 ~-~v~~~~~G~~~~~~~~dgi--lp~~-~~G~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          219 W-PEPVKINGDFGTLSGTEKI--VTVP-VGNESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             C-CEECEESSCCCCCTTEEEE--EEEE-ETTEEEEEEEETTEEEEEECSST
T ss_pred             e-eecccccCCcccccCcccc--cccc-cCCEEEEEEcCCCCEEEEECCCC
Confidence            0 11111  21   1112333  2211 12555 66666777777776655

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.05  E-value=1.4  Score=37.43  Aligned_cols=103  Identities=10%  Similarity=0.171  Sum_probs=56.7

Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-C-----CeEEEEEcCCCcceeeEEeeecC-Cc
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-D-----RKVIIWTSNDYVTWTPFIMNTFD-DV  270 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D-----~~i~vw~~~~~~~~~~~~~~~~~-~~  270 (318)
                      +.+.+||..++++.....+......-..+.+      ++.+++.||. +     ..+.+||..+. .|...  .... ..
T Consensus       117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~--~~~p~~r  187 (315)
T 4asc_A          117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSH------MDLVYVIGGKGSDRKCLNKMCVYDPKKF-EWKEL--APMQTAR  187 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCTTSCBCCCEEEEETTTT-EEEEC--CCCSSCC
T ss_pred             ceEEEECCCCCcEeECCCCCCcccceeEEEE------CCEEEEEeCCCCCCcccceEEEEeCCCC-eEEEC--CCCCCch
Confidence            4588999988888665444332222222222      2567777776 2     35788887764 34321  1111 11


Q ss_pred             EEEEEEcCCCCEEEEEeCCC-----eEEEEEECCCCceEEEeeec
Q psy2762         271 VWNVSWSLTGDILTVSCGDN-----SVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       271 v~~v~~spdg~~l~s~~~D~-----~v~iW~~~~~~~~~~~~~~~  310 (318)
                      ....+..-++++++.|+.++     .+.++|..+ .+|..+..+-
T Consensus       188 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p  231 (315)
T 4asc_A          188 SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD-NKWAPFEAFP  231 (315)
T ss_dssp             BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT-TEEEEECCCS
T ss_pred             hceEEEEECCEEEEEeccCCCCccceEEEEECCC-CeEEECCCCC
Confidence            11111122677888887654     466676544 5899887654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.01  E-value=1.6  Score=37.95  Aligned_cols=196  Identities=10%  Similarity=-0.037  Sum_probs=107.5

Q ss_pred             eeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          16 IHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        16 v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      ...++|++.+. ++.+-...+.|..++++..           .....+.........+++.. ..+.++++-...+.|.+
T Consensus        75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~-----------~~~~~~~~~~~~p~glavd~-~~g~ly~~d~~~~~I~~  142 (349)
T 3v64_C           75 AIALDFHHRRELVFWSDVTLDRILRANLNGS-----------NVEEVVSTGLESPGGLAVDW-VHDKLYWTDSGTSRIEV  142 (349)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSC-----------SCEEEECSSCSCCCEEEEET-TTTEEEEEETTTTEEEE
T ss_pred             eEEEEEeccccEEEEEeccCCceEEEecCCC-----------CceEEEeCCCCCccEEEEec-CCCeEEEEcCCCCeEEE
Confidence            56788886544 4445456778888887632           11111222223345667643 24566666666788999


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC-CeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD-GTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIG  172 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d-~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~  172 (318)
                      .++........  +...-...+.+++.|.+ +.++.+-... +.|...+.. +..   ...+. ......+.++++|+. 
T Consensus       143 ~~~dG~~~~~l--~~~~l~~P~~iavdp~~-g~ly~td~~~~~~I~r~~~d-G~~---~~~~~~~~~~~PnGla~d~~~-  214 (349)
T 3v64_C          143 ANLDGAHRKVL--LWQSLEKPRAIALHPME-GTIYWTDWGNTPRIEASSMD-GSG---RRIIADTHLFWPNGLTIDYAG-  214 (349)
T ss_dssp             EETTSCSCEEE--ECTTCSCEEEEEEETTT-TEEEEEECSSSCEEEEEETT-SCS---CEESCCSSCSCEEEEEEETTT-
T ss_pred             EcCCCCceEEE--EeCCCCCcceEEEecCc-CeEEEeccCCCCEEEEEeCC-CCC---cEEEEECCCCCcceEEEeCCC-
Confidence            98875432222  22233457899999864 5566655544 566555431 111   11111 112234567887753 


Q ss_pred             CCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                                     +....+-+..+.|..+|++.......  +.........|++..     +.++.+-...+.|...+
T Consensus       215 ---------------~~lY~aD~~~~~I~~~~~dG~~~~~~--~~~~~~~P~giav~~-----~~ly~td~~~~~V~~~~  272 (349)
T 3v64_C          215 ---------------RRMYWVDAKHHVIERANLDGSHRKAV--ISQGLPHPFAITVFE-----DSLYWTDWHTKSINSAN  272 (349)
T ss_dssp             ---------------TEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEET-----TEEEEEETTTTEEEEEE
T ss_pred             ---------------CEEEEEECCCCEEEEEeCCCCceEEE--EeCCCCCceEEEEEC-----CEEEEecCCCCeEEEEE
Confidence                           23445556667899998876432111  222233456777732     55666666677777777


Q ss_pred             c
Q psy2762         253 S  253 (318)
Q Consensus       253 ~  253 (318)
                      .
T Consensus       273 ~  273 (349)
T 3v64_C          273 K  273 (349)
T ss_dssp             T
T ss_pred             c
Confidence            3

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.82  E-value=1.8  Score=37.46  Aligned_cols=52  Identities=13%  Similarity=0.201  Sum_probs=29.3

Q ss_pred             CcEEEEEEC-C---------CeEEEEeCCCCcEEEEEEec-CCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          80 GTLLASCSY-D---------RKVIIWRGDNGNWFKYYEYN-NHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        80 ~~~las~s~-D---------g~v~vWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      +.+++.||. +         ..+.++|+.+..+.....+. .....-.++.  .+  +.+++.|+.+
T Consensus        66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~~  128 (357)
T 2uvk_A           66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HN--GKAYVTGGVN  128 (357)
T ss_dssp             TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ET--TEEEEEECCC
T ss_pred             CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--EC--CEEEEEeCcC
Confidence            567777776 2         46888898887775543332 1111122222  33  5677888765

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.68  E-value=2.1  Score=37.58  Aligned_cols=205  Identities=14%  Similarity=0.126  Sum_probs=104.5

Q ss_pred             eeeeeeecCCCCEEEEee------------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecc-----cccCeEEEEecCC
Q psy2762          15 MIHDAEMDYLGLYLATCS------------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG-----HSGPVWQVAWAHP   77 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s------------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~~~~   77 (318)
                      .-.++.+.|+|..+++++            .+|.|.++|.+...       .+...+ .+.+     .......+.+..+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~-------~~~~~l-~~~g~~~~~~~f~PhGi~~~~d  122 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-------PAVSEL-EIIGNTLDISSFNPHGISTFID  122 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS-------CCEEEC-EEECSSCCGGGCCEEEEEEEEC
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC-------CceEEE-EccCCCCCcCceeeeeeEEEEC
Confidence            456677888887777763            68999999986220       011111 2222     2234555665332


Q ss_pred             CCCc--EEEEEEC--CCeEEEEeCCCC--cEEEEEEecCC-CcCeEEEEeeCCCCCcEEEEeec---C------------
Q psy2762          78 QFGT--LLASCSY--DRKVIIWRGDNG--NWFKYYEYNNH-DSSVNSIAWAPKEFGLILACGSS---D------------  135 (318)
Q Consensus        78 ~~~~--~las~s~--Dg~v~vWd~~~~--~~~~~~~~~~h-~~~v~~v~~~p~~~~~~lasgs~---d------------  135 (318)
                      .++.  +++.-..  +.+|.+|++...  .......+.+. -...+.+++.++  +.+.++...   |            
T Consensus       123 ~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~--G~fyvt~~~~ftd~~~~~~e~~~~~  200 (355)
T 3sre_A          123 DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGP--EHFYATNDHYFIDPYLKSWEMHLGL  200 (355)
T ss_dssp             TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEET--TEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred             CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCC--CCEEecCCcEeCCcccccchhhccC
Confidence            2332  3333222  568888876543  33333344432 235789999987  555555431   1            


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC-CeEEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG-DKWIEET  214 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~-~~~~~~~  214 (318)
                      ..=.+|.+..+    +...+...-...+.++|+|+.                ....++-+..+.|+.|+++. +......
T Consensus       201 ~~g~vyr~d~~----~~~~~~~~l~~pNGia~spDg----------------~~lYvadt~~~~I~~~~~~~~g~l~~~~  260 (355)
T 3sre_A          201 AWSFVTYYSPN----DVRVVAEGFDFANGINISPDG----------------KYVYIAELLAHKIHVYEKHANWTLTPLR  260 (355)
T ss_dssp             CCEEEEEECTT----CCEEEEEEESSEEEEEECTTS----------------SEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred             CccEEEEEECC----eEEEeecCCcccCcceECCCC----------------CEEEEEeCCCCeEEEEEECCCCcEecCE
Confidence            12234444322    122222222345788999973                12345556678899998763 3332222


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCC-CeEEEEEc
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTS  253 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~i~vw~~  253 (318)
                      .+ ......-.++..++   +|.+.+++..+ +.|..|+.
T Consensus       261 ~~-~~~g~PDGi~vD~e---~G~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          261 VL-SFDTLVDNISVDPV---TGDLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             EE-ECSSEEEEEEECTT---TCCEEEEEESCHHHHHSCCT
T ss_pred             EE-eCCCCCceEEEeCC---CCcEEEEecCCceEEEEECC
Confidence            22 12233456677662   15666655544 23333443

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=94.55  E-value=1.9  Score=37.66  Aligned_cols=120  Identities=8%  Similarity=0.082  Sum_probs=66.9

Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc---cCCCCeeEEEEccCCCCCccE
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE---NHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      ...++|.|+                 +. |..+..++.|++++  .++......+.   .-......|+|+|++..++.+
T Consensus        33 P~~ia~~pd-----------------G~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~l   92 (352)
T 2ism_A           33 PWALAFLPD-----------------GG-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYV   92 (352)
T ss_dssp             EEEEEECTT-----------------SC-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred             ceEEEEcCC-----------------Ce-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEE
Confidence            357788886                 34 44445568899888  34332222221   123457899999976544555


Q ss_pred             EEEEeCC-----CeEEEEEcCCCcceeeE-EeeecC------CcEEEEEEcCCCCEEEEEeCCCe-----------EEEE
Q psy2762         239 IASCSQD-----RKVIIWTSNDYVTWTPF-IMNTFD------DVVWNVSWSLTGDILTVSCGDNS-----------VSLW  295 (318)
Q Consensus       239 l~s~s~D-----~~i~vw~~~~~~~~~~~-~~~~~~------~~v~~v~~spdg~~l~s~~~D~~-----------v~iW  295 (318)
                      .++-...     ..|..++.......... .+....      .....++|.|||.+.++.+..+.           =+|+
T Consensus        93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~  172 (352)
T 2ism_A           93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKIL  172 (352)
T ss_dssp             EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred             EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEE
Confidence            5555543     56777776642100111 111111      13468999999987776543211           2677


Q ss_pred             EECCCC
Q psy2762         296 KENTDG  301 (318)
Q Consensus       296 ~~~~~~  301 (318)
                      .++.+|
T Consensus       173 ri~~dG  178 (352)
T 2ism_A          173 RLTPEG  178 (352)
T ss_dssp             EECTTS
T ss_pred             EEcCCC
Confidence            776655

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=94.36  E-value=3.4  Score=38.78  Aligned_cols=24  Identities=13%  Similarity=0.068  Sum_probs=20.0

Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEE
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFK  104 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~  104 (318)
                      ..++.++.+|.+.++|..+++.+-
T Consensus       337 ~~v~~~~~~G~l~~lD~~tG~~lw  360 (582)
T 1flg_A          337 KATAHADRNGFFYVVDRSNGKLQN  360 (582)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEEE
T ss_pred             EEEEEECCCceEEEEECCCCCEec
Confidence            378889999999999999887543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.35  E-value=2.3  Score=38.62  Aligned_cols=101  Identities=11%  Similarity=0.053  Sum_probs=54.7

Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEccc------CCCCeeEEEEccCCCCCccEEEEEeC------------CCeEE
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLEN------HSDWVRDVAWAPSWGLSKCMIASCSQ------------DRKVI  249 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~------h~~~V~~v~~sp~~~~~~~~l~s~s~------------D~~i~  249 (318)
                      +..+++-...+.|++++..++.......+..      .......|+|+|++..++.+.++-+.            ...|.
T Consensus        38 G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~  117 (454)
T 1cru_A           38 NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIR  117 (454)
T ss_dssp             SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEE
T ss_pred             CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEE
Confidence            4555554444468888765444333333321      12446799999987655666666543            12444


Q ss_pred             EEEcCCCc-ce-eeE-Eee----ecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         250 IWTSNDYV-TW-TPF-IMN----TFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       250 vw~~~~~~-~~-~~~-~~~----~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      -++..... .. ... .+.    ........++|.|||++.++.+.
T Consensus       118 r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          118 RYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             EEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             EEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence            45443211 00 011 111    11235789999999998887664

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=94.35  E-value=4.2  Score=39.76  Aligned_cols=182  Identities=9%  Similarity=-0.077  Sum_probs=97.9

Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee-cccccccceeee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSW  167 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~  167 (318)
                      ...|+..++.......+.   .....+..|+|.+.+ +.++.+-...+.|..+++...........+ .........+++
T Consensus       403 ~~~Ir~i~l~~~~~~~l~---~~~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv  478 (791)
T 3m0c_C          403 RHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV  478 (791)
T ss_dssp             BSSEEEECTTSCCCEEEE---CSCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred             ccceeEeeccCCcceeee---cCCCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence            456777777655433322   223557789999854 556666666677776665321100011111 111223344555


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-CC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DR  246 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~  246 (318)
                      .+..                ++.+++-...+.|.+.++++.....+  +.......+.|++.|.   .+.++.+-.. ..
T Consensus       479 D~~~----------------~~LY~tD~~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~---~g~LYwtD~g~~~  537 (791)
T 3m0c_C          479 DWIH----------------SNIYWTDSVLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPV---HGFMYWTDWGTPA  537 (791)
T ss_dssp             ETTT----------------TEEEEEETTTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETT---TTEEEEEECSSSC
T ss_pred             eecC----------------CcEEEEecCCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecC---CCCEEEecCCCCC
Confidence            4421                24556667778899999876543222  2223344789999986   3444444322 36


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEE
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKE  297 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~  297 (318)
                      .|.+.++.+...  .............|+++|.+..|..+- ..+.|+..++
T Consensus       538 ~I~~~~~dG~~~--~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~  587 (791)
T 3m0c_C          538 KIKKGGLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  587 (791)
T ss_dssp             EEEEEETTSCCE--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             eEEEEecCCCce--EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence            788887765431  112222235688999998776666553 3445555553

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.27  E-value=2.2  Score=36.22  Aligned_cols=51  Identities=16%  Similarity=0.255  Sum_probs=28.0

Q ss_pred             CcEEEEEECC-------CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          80 GTLLASCSYD-------RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        80 ~~~las~s~D-------g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +.+++.|+.+       ..+.++|+.+..+.....++.....-..+.  .+  +.+++.|+.
T Consensus       110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~--~~iyv~GG~  167 (318)
T 2woz_A          110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HN--GMIYCLGGK  167 (318)
T ss_dssp             TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ET--TEEEEECCE
T ss_pred             CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--EC--CEEEEEcCC
Confidence            6777777764       357788888877765433322111111222  23  566777764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.15  E-value=2.3  Score=36.06  Aligned_cols=109  Identities=11%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             ceEEEecC------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCC-----CeEEEEEcCCCc
Q psy2762         189 KRLVSGGC------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD-----RKVIIWTSNDYV  257 (318)
Q Consensus       189 ~~lasgs~------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-----~~i~vw~~~~~~  257 (318)
                      +.++.|+.      -+.+.+||..++++.....+......-..+.+      ++.+++.||.+     ..+.+||..+..
T Consensus       160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH------KGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE------CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            44555653      23588999999888665443322222222222      25677777754     346678876643


Q ss_pred             ceeeEEeeecCCcEEEEEEcCCCCEEEEEeCC--------------CeEEEEEECCCCceEEE
Q psy2762         258 TWTPFIMNTFDDVVWNVSWSLTGDILTVSCGD--------------NSVSLWKENTDGAWQCI  306 (318)
Q Consensus       258 ~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D--------------~~v~iW~~~~~~~~~~~  306 (318)
                       |...........-.++. ..++++++.||.+              ..+.++|..+ .+|..+
T Consensus       234 -W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~  293 (318)
T 2woz_A          234 -WEVMTEFPQERSSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK-KEWAGM  293 (318)
T ss_dssp             -EEECCCCSSCCBSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT-TEEEEE
T ss_pred             -EEECCCCCCcccceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC-CEehhh
Confidence             43211111111111222 2267777777654              3466666444 589887

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=93.98  E-value=3.7  Score=37.72  Aligned_cols=214  Identities=11%  Similarity=0.051  Sum_probs=111.6

Q ss_pred             eEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC-CCcCeEEEEe-------eCCCCCcEEEEeecCC----
Q psy2762          69 VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAW-------APKEFGLILACGSSDG----  136 (318)
Q Consensus        69 V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~-h~~~v~~v~~-------~p~~~~~~lasgs~d~----  136 (318)
                      -..++|.+...+.++++-...+.|++.|+..+....+..... .......|+|       +++. ..++++-..++    
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~~  219 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGDE  219 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGGG
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCccc
Confidence            456787631234455554444678888888765433332211 1224789999       8873 23555544432    


Q ss_pred             --eEEEEEeecCCCCcce----eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc----
Q psy2762         137 --TISFLTYMSDTNSWES----RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE----  206 (318)
Q Consensus       137 --~i~i~~~~~~~~~~~~----~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~----  206 (318)
                        .|.+.+... ...+..    ..+.. -..+..++.+|+.                +..+++-..++.|..+|++    
T Consensus       220 ~~~V~~i~r~~-~G~~~~~~~~~~v~~-~~~p~giavdp~~----------------g~LYvtd~~~g~V~r~d~~~~~~  281 (496)
T 3kya_A          220 SPSVYIIKRNA-DGTFDDRSDIQLIAA-YKQCNGATIHPIN----------------GELYFNSYEKGQVFRLDLVDYFK  281 (496)
T ss_dssp             EEEEEEEECCT-TSCCSTTSCEEEEEE-ESCCCCEEECTTT----------------CCEEEEETTTTEEEEECHHHHHH
T ss_pred             CceEEEEecCC-CCceeecccceeecc-CCCceEEEEcCCC----------------CeEEEEECCCCEEEEEecccccc
Confidence              244443211 111210    11211 1234566667742                3456677788889999987    


Q ss_pred             ---CCeE------------EEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCccee--eEEeeec-
Q psy2762         207 ---GDKW------------IEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVTWT--PFIMNTF-  267 (318)
Q Consensus       207 ---~~~~------------~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~~~--~~~~~~~-  267 (318)
                         ++..            .+.... +...+-+.|+|+|+    +. +.++=.....|+.++........  +....+. 
T Consensus       282 ~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~----G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~  356 (496)
T 3kya_A          282 TIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPT----GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY  356 (496)
T ss_dssp             HHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTT----SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT
T ss_pred             cccCceeecccccccccccceeEec-CCCCCceEEEEcCC----CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC
Confidence               4432            122222 23345689999997    55 45555567788886654321100  0111110 


Q ss_pred             -----C---------CcEE-EEEEc-------CCCCEEEEEeCCCeEEEEEECCCCceEEEee
Q psy2762         268 -----D---------DVVW-NVSWS-------LTGDILTVSCGDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       268 -----~---------~~v~-~v~~s-------pdg~~l~s~~~D~~v~iW~~~~~~~~~~~~~  308 (318)
                           .         .... .+...       ++|.++++=.....||.++  ..|...+++-
T Consensus       357 g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~--~~G~v~TiaG  417 (496)
T 3kya_A          357 KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT--PEGIVSTYAG  417 (496)
T ss_dssp             TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC--TTCBEEEEEE
T ss_pred             CCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe--CCCCEEEEec
Confidence                 0         1233 45554       4666666555667777775  6677766653

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=93.92  E-value=4.7  Score=38.72  Aligned_cols=200  Identities=13%  Similarity=0.100  Sum_probs=99.8

Q ss_pred             CcEEEEEECC----CeEEEEeCCCCcEEEEE-E-----ecCCCcCeEEEEeeCCCCCcEEEEeecCC------eEEEEEe
Q psy2762          80 GTLLASCSYD----RKVIIWRGDNGNWFKYY-E-----YNNHDSSVNSIAWAPKEFGLILACGSSDG------TISFLTY  143 (318)
Q Consensus        80 ~~~las~s~D----g~v~vWd~~~~~~~~~~-~-----~~~h~~~v~~v~~~p~~~~~~lasgs~d~------~i~i~~~  143 (318)
                      +.+++.||.+    ..+.++|+.+..+.... .     +......-..+.+..+  +.+++.|+.++      .+.+||+
T Consensus       398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~--~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN--NQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT--TEEEEECCBSSTTCBCCCCEEEET
T ss_pred             CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC--CEEEEEcCCCCCCCccccEEEEeC
Confidence            5677777754    45778898887776554 2     1111111222333213  56777877543      2334443


Q ss_pred             ecCCCCcceeeeccc-ccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCC--eEEEEEccCCeEEEEEE---cc
Q psy2762         144 MSDTNSWESRKIAAH-TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDN--LIKIWKQEGDKWIEETK---LE  217 (318)
Q Consensus       144 ~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~i~iwd~~~~~~~~~~~---~~  217 (318)
                        ..+.|....-... ......+.+. +                 ++.++.||.++  .+.+||..++.|.....   +.
T Consensus       476 --~t~~W~~~~~~p~~R~~h~~~~~~-~-----------------~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p  535 (695)
T 2zwa_A          476 --KTREWSMIKSLSHTRFRHSACSLP-D-----------------GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF  535 (695)
T ss_dssp             --TTTEEEECCCCSBCCBSCEEEECT-T-----------------SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG
T ss_pred             --CCCcEEECCCCCCCcccceEEEEc-C-----------------CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC
Confidence              3333432110000 0000111111 1                 34567777655  68999999988865443   22


Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeC--C-----CeEEEEEcCCCcc-----eeeEEeeecCC-cEEEEEEcCCCCEEE
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQ--D-----RKVIIWTSNDYVT-----WTPFIMNTFDD-VVWNVSWSLTGDILT  284 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~--D-----~~i~vw~~~~~~~-----~~~~~~~~~~~-~v~~v~~spdg~~l~  284 (318)
                      .....-..+.+...   .+.+++.||.  +     ..+.+||+....-     |.......... .-.++....++++++
T Consensus       536 ~~r~~~~a~v~~~~---~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv  612 (695)
T 2zwa_A          536 QNSLVSAGLEFDPV---SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLI  612 (695)
T ss_dssp             GSCCBSCEEEEETT---TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEE
T ss_pred             CcccceeEEEEeCC---CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEE
Confidence            22222223455442   2567777776  2     3588889876541     43221111111 111233333477777


Q ss_pred             EEeCC--------CeEEEEEECCCCceEE
Q psy2762         285 VSCGD--------NSVSLWKENTDGAWQC  305 (318)
Q Consensus       285 s~~~D--------~~v~iW~~~~~~~~~~  305 (318)
                      .||.+        ..+.++|..+ ..|..
T Consensus       613 ~GG~~~~~~~~~~~~v~~yd~~t-~~W~~  640 (695)
T 2zwa_A          613 VGGTSPSGLFDRTNSIISLDPLS-ETLTS  640 (695)
T ss_dssp             ECCBCSSCCCCTTTSEEEEETTT-TEEEE
T ss_pred             ECCccCCCCCCCCCeEEEEECCC-CeEEE
Confidence            77743        4588888655 57874

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=93.84  E-value=3.1  Score=36.40  Aligned_cols=176  Identities=14%  Similarity=0.140  Sum_probs=89.4

Q ss_pred             CCCeEEEEeCCC--CcEEEEEEecC-----CCcCeEEEEeeCC--CCCcEEEEeec--CCeEEEEEeecCCCCcc-eeee
Q psy2762          88 YDRKVIIWRGDN--GNWFKYYEYNN-----HDSSVNSIAWAPK--EFGLILACGSS--DGTISFLTYMSDTNSWE-SRKI  155 (318)
Q Consensus        88 ~Dg~v~vWd~~~--~~~~~~~~~~~-----h~~~v~~v~~~p~--~~~~~lasgs~--d~~i~i~~~~~~~~~~~-~~~~  155 (318)
                      .+|.|-++|+.+  .+. ....+.+     .....-.+++.++  +...++++-..  +.+|.+|++..+..... ...+
T Consensus        81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~  159 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI  159 (355)
T ss_dssp             -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred             CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence            689999999873  222 2223333     1235667777663  22245565444  56888888865432111 1111


Q ss_pred             cccc-cccceeeeCCCCCCCccccccCCCCCCccceEEEec-----------------CCCeEEEEEccCCeEEEEEEcc
Q psy2762         156 AAHT-IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGG-----------------CDNLIKIWKQEGDKWIEETKLE  217 (318)
Q Consensus       156 ~~h~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs-----------------~d~~i~iwd~~~~~~~~~~~~~  217 (318)
                      .+.. ...+.+...++                 +...++..                 ..+.|.-++.  ++...  ...
T Consensus       160 ~g~~~~~pND~~v~~~-----------------G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~--~~~  218 (355)
T 3sre_A          160 RHKLLPSVNDIVAVGP-----------------EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRV--VAE  218 (355)
T ss_dssp             CCTTCSSEEEEEEEET-----------------TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEE--EEE
T ss_pred             ccCCCCCCceEEEeCC-----------------CCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEE--eec
Confidence            1111 12345555543                 12222221                 1233444443  32211  111


Q ss_pred             cCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC-CCCEEEEEeCC
Q psy2762         218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL-TGDILTVSCGD  289 (318)
Q Consensus       218 ~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp-dg~~l~s~~~D  289 (318)
                      + -..-+.|+|||+   ...+.++-+..+.|..|++..................-.++..+ +|++.+++..+
T Consensus       219 ~-l~~pNGia~spD---g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          219 G-FDFANGINISPD---GKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             E-ESSEEEEEECTT---SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             C-CcccCcceECCC---CCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence            2 233689999997   23445555567899999986432111111113345677889999 59887766533

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.76  E-value=3.7  Score=36.93  Aligned_cols=71  Identities=13%  Similarity=0.175  Sum_probs=48.1

Q ss_pred             CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEee------e---cCCcEEEEEEcCCCCEEEEEe--C
Q psy2762         220 SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMN------T---FDDVVWNVSWSLTGDILTVSC--G  288 (318)
Q Consensus       220 ~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~------~---~~~~v~~v~~spdg~~l~s~~--~  288 (318)
                      ...|..+.|+|-+. .+..|++--.|++||+||+...... |..+.      +   ....|.+++|..+|-.|....  +
T Consensus       124 ~s~I~qVlWHPl~~-~ds~LVVLtsD~~Ir~yDl~~s~~~-P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~  201 (452)
T 3pbp_A          124 KSSIKKVLFHPKSY-RDSCIVVLKEDDTITMFDILNSQEK-PIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE  201 (452)
T ss_dssp             CCCEEEEEECTTBG-GGCEEEEEETTSCEEEEETTCTTSC-CEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred             CCceeEEEeccccC-CCCeEEEEecCCEEEEEEcccCCCC-CcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence            56799999999643 3667888999999999999873321 22221      1   114578889998776555544  5


Q ss_pred             CCeE
Q psy2762         289 DNSV  292 (318)
Q Consensus       289 D~~v  292 (318)
                      .|.|
T Consensus       202 ~GDI  205 (452)
T 3pbp_A          202 GGDI  205 (452)
T ss_dssp             SCEE
T ss_pred             CCCE
Confidence            5543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=93.72  E-value=1.7  Score=37.97  Aligned_cols=110  Identities=7%  Similarity=0.027  Sum_probs=60.5

Q ss_pred             EEEecCCCeEEEEEccCCeEEEEEEcc---cCCCCeeEEEEccCCCCCccEEEEEeC---C----CeEEEEEcCCCc-ce
Q psy2762         191 LVSGGCDNLIKIWKQEGDKWIEETKLE---NHSDWVRDVAWAPSWGLSKCMIASCSQ---D----RKVIIWTSNDYV-TW  259 (318)
Q Consensus       191 lasgs~d~~i~iwd~~~~~~~~~~~~~---~h~~~V~~v~~sp~~~~~~~~l~s~s~---D----~~i~vw~~~~~~-~~  259 (318)
                      |..+..++.|++++. .++ .....+.   .-......|+|+|++..++.+.++-+.   +    ..|..|+..... ..
T Consensus        42 l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~  119 (354)
T 3a9g_A           42 YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKL  119 (354)
T ss_dssp             EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCE
T ss_pred             EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCc
Confidence            444555689998874 333 2222221   122347899999976555666665543   3    567777765431 00


Q ss_pred             -eeEE----eee-cCCcEEEEEEcCCCCEEEEEeCCCe-----------EEEEEECCCCc
Q psy2762         260 -TPFI----MNT-FDDVVWNVSWSLTGDILTVSCGDNS-----------VSLWKENTDGA  302 (318)
Q Consensus       260 -~~~~----~~~-~~~~v~~v~~spdg~~l~s~~~D~~-----------v~iW~~~~~~~  302 (318)
                       ....    +.. .......++|.|||.++++.+..+.           =+|+.++.+|.
T Consensus       120 ~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~  179 (354)
T 3a9g_A          120 KEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR  179 (354)
T ss_dssp             EEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred             CccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence             0111    111 1113467999999988777553221           15777766554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=93.50  E-value=4.5  Score=37.15  Aligned_cols=247  Identities=10%  Similarity=0.008  Sum_probs=127.9

Q ss_pred             eeeeeeecCC--CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc---cccCeEEEEe-------cCCCCCcE
Q psy2762          15 MIHDAEMDYL--GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG---HSGPVWQVAW-------AHPQFGTL   82 (318)
Q Consensus        15 ~v~~~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~---h~~~V~~v~~-------~~~~~~~~   82 (318)
                      ....++|+|.  ++++++-...+.|++.|++.           +.+...+..   .......++|       +.  ++.+
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~  206 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEY  206 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTT-----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBC--TTCE
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCC-----------CEEEEEEccCccccCCCcEEEEeecccccCC--CCCE
Confidence            3557889983  44454444446788888752           233222222   1224788998       74  4776


Q ss_pred             EEEEECCC-------eEEEEeCCC-CcEE------EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEee----
Q psy2762          83 LASCSYDR-------KVIIWRGDN-GNWF------KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM----  144 (318)
Q Consensus        83 las~s~Dg-------~v~vWd~~~-~~~~------~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~----  144 (318)
                      |+.+...+       .|.+.+... +.+.      ....+    .....++++|++ +.++++-..++.|..+++.    
T Consensus       207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~-g~LYvtd~~~g~V~r~d~~~~~~  281 (496)
T 3kya_A          207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPIN-GELYFNSYEKGQVFRLDLVDYFK  281 (496)
T ss_dssp             EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTT-CCEEEEETTTTEEEEECHHHHHH
T ss_pred             EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCC-CeEEEEECCCCEEEEEecccccc
Confidence            66666554       255554333 1221      11122    124577889964 5677777778888888774    


Q ss_pred             ---cCCC-----Ccc---eeeec--ccccccceeeeCCCCCCCccccccCCCCCCccc-eEEEecCCCeEEEEEccC--C
Q psy2762         145 ---SDTN-----SWE---SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK-RLVSGGCDNLIKIWKQEG--D  208 (318)
Q Consensus       145 ---~~~~-----~~~---~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~i~iwd~~~--~  208 (318)
                         .+..     .+.   ...+.  +.......++|+|+                 +. .+++-+....|+.++...  +
T Consensus       282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~-----------------G~~lYvaD~~~h~I~kid~dg~~~  344 (496)
T 3kya_A          282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPT-----------------GKYAYFGVINNHYFMRSDYDEIKK  344 (496)
T ss_dssp             HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTT-----------------SSEEEEEETTTTEEEEEEEETTTT
T ss_pred             cccCceeecccccccccccceeEecCCCCCceEEEEcCC-----------------CCEEEEEeCCCCEEEEEecCCCcc
Confidence               2221     000   11111  11122356888886                 34 344456667888866543  2


Q ss_pred             eE---EEEEEc---ccCC---------CCee-EEEEc-cCC--CCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee---
Q psy2762         209 KW---IEETKL---ENHS---------DWVR-DVAWA-PSW--GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT---  266 (318)
Q Consensus       209 ~~---~~~~~~---~~h~---------~~V~-~v~~s-p~~--~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~---  266 (318)
                      .+   ......   .+..         .... .+... |++  ...+.++++=.....||.++.....    ..+.+   
T Consensus       345 ~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v----~TiaG~g~  420 (496)
T 3kya_A          345 EFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIV----STYAGRGA  420 (496)
T ss_dssp             EECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBE----EEEEESCT
T ss_pred             eecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCE----EEEecccc
Confidence            21   111111   1111         1123 33443 100  0025566665667788888754321    11111   


Q ss_pred             -----------c----------CCcEEEEEEcCC-CCEEEEEeCCCeEEEEEECCC
Q psy2762         267 -----------F----------DDVVWNVSWSLT-GDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       267 -----------~----------~~~v~~v~~spd-g~~l~s~~~D~~v~iW~~~~~  300 (318)
                                 +          -.....|+++++ |.++++=.....||.++.+..
T Consensus       421 ~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~  476 (496)
T 3kya_A          421 STSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE  476 (496)
T ss_dssp             THHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred             cccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence                       0          124679999997 776665566778888887664

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=93.44  E-value=1.2  Score=38.98  Aligned_cols=124  Identities=10%  Similarity=0.078  Sum_probs=68.0

Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcc----cCCCCeeEEEEccCCCCCcc
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE----NHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~----~h~~~V~~v~~sp~~~~~~~  237 (318)
                      ...++|.|+                 +..+++--..|.|++++..++.......+.    ........|+|+|++..++.
T Consensus        34 P~~ia~~pd-----------------G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~   96 (347)
T 3das_A           34 PWGLAPLPG-----------------GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM   96 (347)
T ss_dssp             EEEEEECTT-----------------SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE
T ss_pred             ceEEEEcCC-----------------CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCE
Confidence            356788886                 455666555899999876555432222221    22345789999996533354


Q ss_pred             EEEEEe--CCCeEEEEEcCCC-----c-ceeeEEeee----cCCcEEEEEEcCCCCEEEEEeCCC-----------eEEE
Q psy2762         238 MIASCS--QDRKVIIWTSNDY-----V-TWTPFIMNT----FDDVVWNVSWSLTGDILTVSCGDN-----------SVSL  294 (318)
Q Consensus       238 ~l~s~s--~D~~i~vw~~~~~-----~-~~~~~~~~~----~~~~v~~v~~spdg~~l~s~~~D~-----------~v~i  294 (318)
                      +.++-+  .+..|.-|.....     . ......+..    ....-..+.|.|||.+.++.++.+           .=+|
T Consensus        97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I  176 (347)
T 3das_A           97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI  176 (347)
T ss_dssp             EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred             EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence            444432  3445555555441     1 000111111    112345799999999888765311           2356


Q ss_pred             EEECCCCc
Q psy2762         295 WKENTDGA  302 (318)
Q Consensus       295 W~~~~~~~  302 (318)
                      |.++.+|.
T Consensus       177 lRi~~dG~  184 (347)
T 3das_A          177 LRMTPDGE  184 (347)
T ss_dssp             EEECTTSS
T ss_pred             EEEeCCCC
Confidence            77666554

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=93.13  E-value=4.1  Score=35.58  Aligned_cols=199  Identities=12%  Similarity=0.180  Sum_probs=109.8

Q ss_pred             EEecCCCC--CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC--C----cEEEEeec--CCeEEEE
Q psy2762          72 VAWAHPQF--GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--G----LILACGSS--DGTISFL  141 (318)
Q Consensus        72 v~~~~~~~--~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~----~~lasgs~--d~~i~i~  141 (318)
                      ..|.+|.+  ..+++...-++-+.++|+ .++.++  .+.  .+.++.|..-|.-.  +    ..+++.-.  +++|.++
T Consensus        30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~--~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf  104 (355)
T 3amr_A           30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLH--SYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY  104 (355)
T ss_dssp             EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEE--EEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred             cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEE--Ecc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence            34554432  345555566788999999 455333  233  25677777776300  0    22333333  5789999


Q ss_pred             EeecCCCCcceeeeccc--c-----cccceeee--CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC---C-
Q psy2762         142 TYMSDTNSWESRKIAAH--T-----IGCNAVSW--GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG---D-  208 (318)
Q Consensus       142 ~~~~~~~~~~~~~~~~h--~-----~~v~~~~~--~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~---~-  208 (318)
                      ++......  +..+..-  .     ..+..+++  +|..+               ..|+.....++.+..|++..   + 
T Consensus       105 ~iDp~~~~--l~~i~~~~~pv~t~~~~pyGlcly~~~~~g---------------~~yafV~~k~G~~~q~~l~~~~~g~  167 (355)
T 3amr_A          105 AIDGKNGT--LQSMTDPDHPIATAINEVYGFTLYHSQKTG---------------KYYAMVTGKEGEFEQYELKADKNGY  167 (355)
T ss_dssp             EECTTTCC--EEECSCTTSCEECCCSSCCCEEEEECTTTC---------------CEEEEEECSSSEEEEEEEEECTTSC
T ss_pred             EECCCCCc--eeeccccccCcCCCCCCeeEEEEEecCCCC---------------cEEEEEECCCCeEEEEEEEeCCCCc
Confidence            87433322  2222110  0     12233333  33210               13677778889999998732   2 


Q ss_pred             ---eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc--ceeeEEe---eecCCcEEEEEE--cC
Q psy2762         209 ---KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV--TWTPFIM---NTFDDVVWNVSW--SL  278 (318)
Q Consensus       209 ---~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~--~~~~~~~---~~~~~~v~~v~~--sp  278 (318)
                         +.+....+   ...+..+...+.    ...|..+-+|.-|..++.+...  .......   ....+.+..++.  .+
T Consensus       168 ~~~~lVR~f~l---gsq~EgcvvDd~----~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~  240 (355)
T 3amr_A          168 ISGKKVRAFKM---NSQTEGMAADDE----YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA  240 (355)
T ss_dssp             EEEEEEEEEEC---SSCEEEEEEETT----TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG
T ss_pred             ccceEEEEecC---CCCcceEEEcCC----CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC
Confidence               22333333   234677788875    5578888888777667654322  1111111   122346777877  56


Q ss_pred             CCC-EEEEEe-CCCeEEEEEECC
Q psy2762         279 TGD-ILTVSC-GDNSVSLWKENT  299 (318)
Q Consensus       279 dg~-~l~s~~-~D~~v~iW~~~~  299 (318)
                      +|+ +|+.++ .+++.-+|+...
T Consensus       241 ~g~gyLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          241 DGKGYLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             GGCEEEEEEEGGGTEEEEEESST
T ss_pred             CCCEEEEEEcCCCCEEEEEECCC
Confidence            666 666666 577999999753

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=93.13  E-value=4.4  Score=35.93  Aligned_cols=206  Identities=8%  Similarity=-0.071  Sum_probs=108.3

Q ss_pred             ceeeeeeecCCCC-EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          14 DMIHDAEMDYLGL-YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        14 ~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ..+..++|++.+. +..+-...+.|..++++...       ........+.........+++.. ..+.++++-...+.|
T Consensus       112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~-------~~~~~~~~~~~~~~~p~glavD~-~~~~lY~~d~~~~~I  183 (400)
T 3p5b_L          112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH-------GVSSYDTVISRDIQAPDGLAVDW-IHSNIYWTDSVLGTV  183 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------CCCEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEE
T ss_pred             CcceEEeeeeccCceEEEecCCCeEEEEEcccCC-------CCCcceEEEeCCCCCcccEEEEe-cCCceEEEECCCCeE
Confidence            4567788887544 44444456778888775210       00011122222334566777753 235666666667899


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec-CCeEEEEEeecCCCCcceeee-cccccccceeeeCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS-DGTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPG  170 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~-d~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~  170 (318)
                      .+.++.......+.  ...-.....|++.|.. +.++.+-.. .+.|...+.. +..   ...+ .......+.++++|.
T Consensus       184 ~~~~~~g~~~~~l~--~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~d-G~~---~~~~~~~~l~~P~glavd~~  256 (400)
T 3p5b_L          184 SVADTKGVKRKTLF--RENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLN-GVD---IYSLVTENIQWPNGITLDLL  256 (400)
T ss_dssp             EEECTTTCSEEEEE--ECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETT-SCS---CEEEECSSCSCEEEEEEETT
T ss_pred             EEEeCCCCceEEEE--eCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCC-CCc---cEEEEECCCCceEEEEEEeC
Confidence            99988765432222  2223457899999864 455555422 3555554431 111   1111 111123456777764


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                      .                +....+=+..+.|..+|++...........+.-.....|+...     +.++.+-...+.|..
T Consensus       257 ~----------------~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-----~~lywtd~~~~~V~~  315 (400)
T 3p5b_L          257 S----------------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-----DKVFWTDIINEAIFS  315 (400)
T ss_dssp             T----------------TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-----TEEEEEESSSCSEEE
T ss_pred             C----------------CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-----CEEEEecCCCCeEEE
Confidence            2                2334444566789999987654322222212223345666632     456666666777888


Q ss_pred             EEcCC
Q psy2762         251 WTSND  255 (318)
Q Consensus       251 w~~~~  255 (318)
                      ++..+
T Consensus       316 ~~~~~  320 (400)
T 3p5b_L          316 ANRLT  320 (400)
T ss_dssp             EESSS
T ss_pred             EEcCC
Confidence            87433

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=92.97  E-value=4  Score=34.99  Aligned_cols=181  Identities=13%  Similarity=0.023  Sum_probs=95.9

Q ss_pred             CCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          89 DRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        89 Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      ...|+..++....  ....  +.+ ...+..++|.+.+ +.++.+-...+.|..+++.....  ....+.........++
T Consensus        12 ~~~I~~i~l~~~~~~~~~~--~~~-~~~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~--~~~~~~~~l~~p~gla   85 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIV--VGG-LEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLSPDGLA   85 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEE--EEE-EEEEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSC--CCEEEEECCSCCCEEE
T ss_pred             cCeEEEEECCCCceEEEEE--ecC-CCccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCc--eEEEEcCCCCCccEEE
Confidence            4577778776542  1111  111 1245688999864 55666656667776665422110  0011111112233455


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-eCC
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-SQD  245 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s~D  245 (318)
                      +.+..                +..+.+-...+.|.+++++.......  +.......+.|++.|.   .+.++.+- +..
T Consensus        86 vd~~~----------------g~ly~~d~~~~~I~~~~~dG~~~~~l--~~~~~~~P~giavdp~---~g~ly~td~~~~  144 (318)
T 3sov_A           86 CDWLG----------------EKLYWTDSETNRIEVSNLDGSLRKVL--FWQELDQPRAIALDPS---SGFMYWTDWGEV  144 (318)
T ss_dssp             EETTT----------------TEEEEEETTTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEEGG---GTEEEEEECSSS
T ss_pred             EEcCC----------------CeEEEEECCCCEEEEEECCCCcEEEE--EeCCCCCccEEEEeCC---CCEEEEEecCCC
Confidence            54421                34455666677899998876432111  2233345689999985   24444443 235


Q ss_pred             CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE-eCCCeEEEEEEC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS-CGDNSVSLWKEN  298 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~-~~D~~v~iW~~~  298 (318)
                      ..|...+......  ......--...+.++|+|++..|.-+ +..+.|..++.+
T Consensus       145 ~~I~r~~~dG~~~--~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d  196 (318)
T 3sov_A          145 PKIERAGMDGSSR--FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD  196 (318)
T ss_dssp             CEEEEEETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CEEEEEEcCCCCe--EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence            6777777654321  11121222456899999976666555 445667666644

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.94  E-value=6.4  Score=37.32  Aligned_cols=231  Identities=6%  Similarity=-0.084  Sum_probs=127.9

Q ss_pred             CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCC
Q psy2762          33 SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHD  112 (318)
Q Consensus        33 ~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~  112 (318)
                      ..+.|+..+++..         ....+..+ ..-..+.+++|.+ .++.++.+-..++.|..+++.......+.  ...-
T Consensus        13 ~~~~I~~i~l~~~---------~~~~~~~~-~~~~~~~~l~~d~-~~~~lywtD~~~~~I~r~~~~g~~~~~v~--~~g~   79 (628)
T 4a0p_A           13 RRADIRRISLETN---------NNNVAIPL-TGVKEASALDFDV-TDNRIYWTDISLKTISRAFMNGSALEHVV--EFGL   79 (628)
T ss_dssp             ETTEEEEEESSCT---------TCEEECCC-CSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSCEEEE--CSSC
T ss_pred             eCCcEEEEECCCC---------CcceEEEc-CCCCceEEEEEEC-CCCEEEEEECCCCeEEEEECCCCCcEEEE--eCCC
Confidence            4678899988632         11111112 2234577899964 35666667667789998888765432222  2112


Q ss_pred             cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      .....+++.+.. +.++.+-...+.|.+.++. +..  ....+...-.....+++.|..                +..+.
T Consensus        80 ~~P~GlAvD~~~-~~LY~tD~~~~~I~v~~~d-G~~--~~~l~~~~l~~P~~iavdp~~----------------G~lY~  139 (628)
T 4a0p_A           80 DYPEGMAVDWLG-KNLYWADTGTNRIEVSKLD-GQH--RQVLVWKDLDSPRALALDPAE----------------GFMYW  139 (628)
T ss_dssp             SCCCEEEEETTT-TEEEEEETTTTEEEEEETT-STT--CEEEECSSCCCEEEEEEETTT----------------TEEEE
T ss_pred             CCcceEEEEeCC-CEEEEEECCCCEEEEEecC-CCc--EEEEEeCCCCCcccEEEccCC----------------CeEEE
Confidence            346678887653 4566666666777776652 211  111111112234567777743                22233


Q ss_pred             Ee-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         193 SG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       193 sg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      +- +..+.|...+++........  . .-...+.|+++++   .+.+..+=...+.|...++.+...   ..+.......
T Consensus       140 tD~g~~~~I~r~~~dG~~~~~l~--~-~~~~P~GlalD~~---~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P  210 (628)
T 4a0p_A          140 TEWGGKPKIDRAAMDGSERTTLV--P-NVGRANGLTIDYA---KRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHP  210 (628)
T ss_dssp             EECSSSCEEEEEETTSCSCEEEE--C-SCSSEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCE
T ss_pred             eCCCCCCEEEEEeCCCCceEEEE--C-CCCCcceEEEccc---cCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCc
Confidence            32 33567777777765432222  2 3455789999986   345555555678899998876432   2222223345


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      ..+++.. +..+++-...+.|...+..++.....+
T Consensus       211 ~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l  244 (628)
T 4a0p_A          211 FGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII  244 (628)
T ss_dssp             EEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             eEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence            6788864 445544445677777775555444433

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=92.86  E-value=6.4  Score=37.10  Aligned_cols=55  Identities=7%  Similarity=-0.080  Sum_probs=33.5

Q ss_pred             CeEEEEEccCCeEEEEEEcccCCC--------CeeEEEEc-cCCCCCc---cEEEEEeCCCeEEEEEcCCCc
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSD--------WVRDVAWA-PSWGLSK---CMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~--------~V~~v~~s-p~~~~~~---~~l~s~s~D~~i~vw~~~~~~  257 (318)
                      +.|.-+|.++++..=......|..        ++. +... .    +|   ..++.++.++.+.+.|..+..
T Consensus       278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~----~G~~~~~v~~~~~~G~l~~lD~~tG~  344 (599)
T 1w6s_A          278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK----DGKARKLLTHPDRNGIVYTLDRTDGA  344 (599)
T ss_dssp             SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT----TSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred             ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc----CCcEEEEEEEECCCcEEEEEECCCCC
Confidence            378888988886543334443422        221 1221 2    24   567788899999999987654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=92.33  E-value=7.2  Score=36.43  Aligned_cols=68  Identities=12%  Similarity=0.137  Sum_probs=37.8

Q ss_pred             CcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc--CeE-EEEeeCCCCCcEEEEeec-----CCeEEEEEeecCCCCc
Q psy2762          80 GTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS--SVN-SIAWAPKEFGLILACGSS-----DGTISFLTYMSDTNSW  150 (318)
Q Consensus        80 ~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~--~v~-~v~~~p~~~~~~lasgs~-----d~~i~i~~~~~~~~~~  150 (318)
                      +..++.++.|+.+..+|..+++..=...+..+..  .+. ..... +  +.+++....     ++.|..+|..+++..|
T Consensus       115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~--g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  190 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K--DTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T--TEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C--CEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence            4677888889999999998887432223322110  111 11111 2  444443332     7888888876555333

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=92.05  E-value=8.9  Score=36.81  Aligned_cols=183  Identities=11%  Similarity=0.125  Sum_probs=87.2

Q ss_pred             CCcEEEEEECCC------eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC--eEEEEEeecCCCCc
Q psy2762          79 FGTLLASCSYDR------KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG--TISFLTYMSDTNSW  150 (318)
Q Consensus        79 ~~~~las~s~Dg------~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~--~i~i~~~~~~~~~~  150 (318)
                      ++.+++.||.++      .+-++|+.+..|.....+......-.++.+. +  +.+++.|+.++  .+.+||+  ..+.|
T Consensus       451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~--~~iyv~GG~~~~~~v~~yd~--~t~~W  525 (695)
T 2zwa_A          451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-D--GNVLILGGVTEGPAMLLYNV--TEEIF  525 (695)
T ss_dssp             TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-T--SCEEEECCBCSSCSEEEEET--TTTEE
T ss_pred             CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-C--CEEEEECCCCCCCCEEEEEC--CCCce
Confidence            367777877643      4778888887775543333211222223322 3  56788887655  4555654  33345


Q ss_pred             ceeeecc----cccccceeeeCCCCCCCccccccCCCCCCccceEEEecC--C-----CeEEEEEccCCe------EEEE
Q psy2762         151 ESRKIAA----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC--D-----NLIKIWKQEGDK------WIEE  213 (318)
Q Consensus       151 ~~~~~~~----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~--d-----~~i~iwd~~~~~------~~~~  213 (318)
                      ......+    .......+.+....                +..++.||.  +     +.+.+||+.++.      |...
T Consensus       526 ~~~~~~g~~p~~r~~~~a~v~~~~~----------------~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~  589 (695)
T 2zwa_A          526 KDVTPKDEFFQNSLVSAGLEFDPVS----------------KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK  589 (695)
T ss_dssp             EECCCSSGGGGSCCBSCEEEEETTT----------------TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE
T ss_pred             EEccCCCCCCCcccceeEEEEeCCC----------------CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc
Confidence            4322111    01111112222210                235566665  2     458899988887      5544


Q ss_pred             EEcc-cCCCCeeEEEEccCCCCCccEEEEEeCC--------CeEEEEEcCCCcceeeEEeeecC------CcE-EEEEEc
Q psy2762         214 TKLE-NHSDWVRDVAWAPSWGLSKCMIASCSQD--------RKVIIWTSNDYVTWTPFIMNTFD------DVV-WNVSWS  277 (318)
Q Consensus       214 ~~~~-~h~~~V~~v~~sp~~~~~~~~l~s~s~D--------~~i~vw~~~~~~~~~~~~~~~~~------~~v-~~v~~s  277 (318)
                      .... .....-..+.+.     ++.+++.||.+        ..+.+||..+. .|....+....      ..+ .++...
T Consensus       590 ~~~p~~~R~~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~-~W~~~~~p~~~~~~~~p~~~gh~~~~~  663 (695)
T 2zwa_A          590 LQHPLFQRYGSQIKYIT-----PRKLLIVGGTSPSGLFDRTNSIISLDPLSE-TLTSIPISRRIWEDHSLMLAGFSLVST  663 (695)
T ss_dssp             EECGGGCCBSCEEEEEE-----TTEEEEECCBCSSCCCCTTTSEEEEETTTT-EEEECCCCHHHHHHSCCCCSSCEEECC
T ss_pred             CCCCCCCcccceEEEeC-----CCEEEEECCccCCCCCCCCCeEEEEECCCC-eEEEeeccccccCCCCccceeeeEEEe
Confidence            4321 111112223332     15677777743        45888988764 35421111100      000 233444


Q ss_pred             CCCCEEEEEeC
Q psy2762         278 LTGDILTVSCG  288 (318)
Q Consensus       278 pdg~~l~s~~~  288 (318)
                      ++|+.++.||.
T Consensus       664 ~~g~i~v~GGg  674 (695)
T 2zwa_A          664 SMGTIHIIGGG  674 (695)
T ss_dssp             ---CEEEECCE
T ss_pred             CCCEEEEEeCC
Confidence            56677777764

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=87.67  E-value=3.5  Score=35.88  Aligned_cols=109  Identities=12%  Similarity=0.089  Sum_probs=55.0

Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE-EEEc----ccCCCCeeEEEEccCCCCCc
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKL----ENHSDWVRDVAWAPSWGLSK  236 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~-~~~~----~~h~~~V~~v~~sp~~~~~~  236 (318)
                      ...++|.|+                 +.+|..+...+.|++++.+. .... ...+    .........|+|+|++..++
T Consensus        20 P~~i~~~pd-----------------G~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g   81 (353)
T 2g8s_A           20 PWALAFLPD-----------------NHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR   81 (353)
T ss_dssp             EEEEEECST-----------------TCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC
T ss_pred             cEEEEEcCC-----------------CCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCC
Confidence            356778886                 34244455678999987543 2110 1111    11123468999999532234


Q ss_pred             cEEEEEeC-------CCeEEEEEcCCCcc-e-eeE-Eeeec------CCcEEEEEEcCCCCEEEEEeC
Q psy2762         237 CMIASCSQ-------DRKVIIWTSNDYVT-W-TPF-IMNTF------DDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       237 ~~l~s~s~-------D~~i~vw~~~~~~~-~-~~~-~~~~~------~~~v~~v~~spdg~~l~s~~~  288 (318)
                      .+.++-+.       ...|..|+...... . ... .+...      ...-..++|.|||.++++.+.
T Consensus        82 ~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd  149 (353)
T 2g8s_A           82 RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE  149 (353)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred             EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence            45554433       22455555543210 0 111 11111      112467999999976666543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=87.51  E-value=19  Score=33.93  Aligned_cols=228  Identities=7%  Similarity=-0.049  Sum_probs=114.5

Q ss_pred             CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCc
Q psy2762          34 DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS  113 (318)
Q Consensus        34 D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~  113 (318)
                      .+.|++.+++..          ......+........+++|.+ .++.++.+=...+.|..+++........ .+...-.
T Consensus        17 ~~~I~~i~~~~~----------~~~~~~~~~~~~~~~~ld~~~-~~~~ly~sD~~~~~I~r~~~~g~~~~~~-v~~~~~~   84 (619)
T 3s94_A           17 RRDLRLVDATNG----------KENATIVVGGLEDAAAVDFVF-SHGLIYWSDVSEEAIKRTEFNKTESVQN-VVVSGLL   84 (619)
T ss_dssp             SSBEEEECCC-------------------CBCCSCEEEEEEET-TTTEEEEEETTTTEEEEEEC-----CEE-EECSSCS
T ss_pred             cccEEEEeCCCC----------cceEEEEEcCCCceEEEEEEe-CCCEEEEEECCCCeEEEEEccCCCceEE-EEeCCCC
Confidence            567888887521          001111222344567888864 3455555544567888888765421111 1222224


Q ss_pred             CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeec-ccccccceeeeCCCCCCCccccccCCCCCCccceEE
Q psy2762         114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIA-AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLV  192 (318)
Q Consensus       114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~la  192 (318)
                      ....+++.+.. +.++.+-...+.|.+.+.. +..   ...+. ..-.....+++.|..                +..+.
T Consensus        85 ~P~GlAvD~~~-~~ly~~d~~~~~I~v~~~d-G~~---~~~l~~~~l~~P~~Iavdp~~----------------g~ly~  143 (619)
T 3s94_A           85 SPDGLACDWLG-EKLYWTDSETNRIEVSNLD-GSL---RKVLFWQELDQPRAIALDPSS----------------GFMYW  143 (619)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTTEEEEEETT-SCS---CEEEECSSCSCCCCEEEETTT----------------TEEEE
T ss_pred             CcCeEEEEecC-CEEEEEeCCCCEEEEEECC-CCC---EEEEEeCCCCCCceEEEecCC----------------CeEEE
Confidence            67889998854 5566666667888877652 211   11121 222234566776642                22233


Q ss_pred             Ee-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         193 SG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       193 sg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      +- +..+.|...++++.......  ...-.+.+.|+++|+   .+.+..+=.....|...++.+.....  .........
T Consensus       144 tD~g~~~~I~r~~~dG~~~~~l~--~~~~~~P~Glald~~---~~~LY~aD~~~~~I~~~~~dG~~~~~--~~~~~~~~P  216 (619)
T 3s94_A          144 TDWGEVPKIERAGMDGSSRFIII--NSEIYWPNGLTLDYE---EQKLYWADAKLNFIHKSNLDGTNRQA--VVKGSLPHP  216 (619)
T ss_dssp             EECSSSCEEEEEETTSCSCEEEE--CSSCSSEEEEEEETT---TTEEEEEETTTCCEEEESSSCCEEC-----------C
T ss_pred             eccCCCCEEEEEECCCCceEEEE--eCCCCCCcEEEEEcc---CCEEEEEeCCCCeEEEecCCCCccEE--EEeCCCCCc
Confidence            32 33456666666654322221  223345789999986   35555555566778888876533211  111111223


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      ..+++..+ ..+.+-...+.|..-+..++..
T Consensus       217 ~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~  246 (619)
T 3s94_A          217 FALTLFED-ILYWTDWSTHSILACNKYTGEG  246 (619)
T ss_dssp             CCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred             eEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence            46777655 3444434566777777555443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=86.16  E-value=16  Score=31.71  Aligned_cols=107  Identities=13%  Similarity=0.079  Sum_probs=56.3

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe----cccccCeEEEEecCC--CCCcEEEEEE-
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL----KGHSGPVWQVAWAHP--QFGTLLASCS-   87 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~----~~h~~~V~~v~~~~~--~~~~~las~s-   87 (318)
                      .-..++|.|+|.++++--..|.|++++....         ....+..+    ....+....+++.++  .++.+.++=+ 
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g---------~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~  103 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTG---------RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS  103 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTC---------CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCC---------cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence            4567999999998887655898888865321         11222222    123455788898532  1344444322 


Q ss_pred             -CCCeEEEEeCCCC--------cEEEEE-EecC-CCcCeEEEEeeCCCCCcEEEEe
Q psy2762          88 -YDRKVIIWRGDNG--------NWFKYY-EYNN-HDSSVNSIAWAPKEFGLILACG  132 (318)
Q Consensus        88 -~Dg~v~vWd~~~~--------~~~~~~-~~~~-h~~~v~~v~~~p~~~~~~lasg  132 (318)
                       .+..|.-|....+        ....++ .+.. .......|+|.|+  +.++++.
T Consensus       104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD--G~Lyvt~  157 (347)
T 3das_A          104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD--KMLYAGT  157 (347)
T ss_dssp             SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT--SCEEEEC
T ss_pred             CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC--CCEEEEE
Confidence             3444444544331        111222 2321 1123567999998  4455543

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=85.01  E-value=37  Score=34.76  Aligned_cols=234  Identities=11%  Similarity=0.032  Sum_probs=117.3

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCC----CCcEEEEEEC-C
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQ----FGTLLASCSY-D   89 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~----~~~~las~s~-D   89 (318)
                      .|..++.+  +.+++.++ ++.+.++.++..         .-..+... .-.+.|.|+++.+..    .+.++|.|.+ |
T Consensus       515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~---------~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d  581 (1158)
T 3ei3_A          515 NISVASCN--SSQVVVAV-GRALYYLQIHPQ---------ELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTD  581 (1158)
T ss_dssp             CCCEEEEC--SSEEEEEE-TTEEEEEEEETT---------EEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTT
T ss_pred             EEEEEEeC--CCEEEEEE-CCEEEEEEeeCC---------ceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCC
Confidence            34444443  23555554 577878777521         00112221 225689999986322    2479999997 9


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-e-ecccccccceeee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-K-IAAHTIGCNAVSW  167 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~-~~~h~~~v~~~~~  167 (318)
                      ++|+|+.+..-+......+.. .....++.+..-+...++.+|-.||.+.-+.+.......... . ..+ ..++.-..+
T Consensus       582 ~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~  659 (1158)
T 3ei3_A          582 ISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTF  659 (1158)
T ss_dssp             TEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEE
T ss_pred             CEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEE
Confidence            999999987655444444432 233445544432224678899999987666553222111111 1 112 112211111


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCe-eEEEEccCCCCCccEEEEEeCCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV-RDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V-~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      ...              +. ...||+++  +..-++-.+ +.+ ....+..  ..+ ....|+..... +. ++. ..++
T Consensus       660 ~~~--------------~~-~~V~a~s~--rp~liy~~~-~~l-~~s~l~~--~~v~~~~~F~se~~~-~g-~v~-~~~~  715 (1158)
T 3ei3_A          660 RSL--------------ST-TNVFACSD--RPTVIYSSN-HKL-VFSNVNL--KEVNYMCPLNSDGYP-DS-LAL-ANNS  715 (1158)
T ss_dssp             ESS--------------SC-EEEEEESS--SCEEEEESS-SSE-EEEEBSS--SCCCEEEEECCSSST-TE-EEE-ECSS
T ss_pred             eeC--------------Cc-eeEEEECC--CCEEEEEcC-Cce-EEeccCh--HHhceEeccCcccCC-Cc-EEE-EcCC
Confidence            110              00 12344432  333334322 222 2222211  123 23455443211 22 333 3356


Q ss_pred             eEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         247 KVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      .++|..+.+...+... .-.....+..++++|+.+.++.+..
T Consensus       716 ~LrI~~i~~~~~~~~~-~ipL~~Tprri~y~~~~~~~~v~~~  756 (1158)
T 3ei3_A          716 TLTIGTIDEIQKLHIR-TVPLYESPRKICYQEVSQCFGVLSS  756 (1158)
T ss_dssp             CEEEEEECCSSSEEEE-EEECSSEEEEEEEEGGGTEEEEEEE
T ss_pred             ceEEEEecccCCeeEE-EEeCCCCceEEEEcCCCCEEEEEEE
Confidence            6999988765544332 2345567899999999887766553

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=82.71  E-value=22  Score=32.19  Aligned_cols=100  Identities=12%  Similarity=0.131  Sum_probs=52.4

Q ss_pred             EEEecCCCeEEEEEccCCeE-EEEEEcc-----c----CCCCeeEEEEccCCCCCccEEEEEeCCC------------eE
Q psy2762         191 LVSGGCDNLIKIWKQEGDKW-IEETKLE-----N----HSDWVRDVAWAPSWGLSKCMIASCSQDR------------KV  248 (318)
Q Consensus       191 lasgs~d~~i~iwd~~~~~~-~~~~~~~-----~----h~~~V~~v~~sp~~~~~~~~l~s~s~D~------------~i  248 (318)
                      |......|.|++++...... .....+.     +    ...-...|+|+|++..++.+.++-+.+.            .|
T Consensus        29 l~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v  108 (463)
T 2wg3_C           29 LFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRV  108 (463)
T ss_dssp             EEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEE
T ss_pred             EEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEE
Confidence            45556789999997543210 0111111     1    1234788999997544455555544321            33


Q ss_pred             EEEEcCCC--c-----c-eeeEEee--ecCCcEEEEEEcCCCCEEEEEeCCC
Q psy2762         249 IIWTSNDY--V-----T-WTPFIMN--TFDDVVWNVSWSLTGDILTVSCGDN  290 (318)
Q Consensus       249 ~vw~~~~~--~-----~-~~~~~~~--~~~~~v~~v~~spdg~~l~s~~~D~  290 (318)
                      .-|.+...  .     . ..+....  .....-..++|.|||.+.++.++.+
T Consensus       109 ~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~  160 (463)
T 2wg3_C          109 VEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM  160 (463)
T ss_dssp             EEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred             EEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence            33555421  0     0 1111111  1123567899999998888777543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=81.28  E-value=5  Score=32.69  Aligned_cols=61  Identities=10%  Similarity=0.048  Sum_probs=37.5

Q ss_pred             eEEEEccCCCCCccEEEEEeCCCeEEEEEcCC--Cccee---eEEeeecCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy2762         224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSND--YVTWT---PFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV  292 (318)
Q Consensus       224 ~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~--~~~~~---~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v  292 (318)
                      ..+-|.|+    |.+.++  .|+.|.-++..+  ...|.   ...-..--..+..|.|.|+|.+.|..  |+.+
T Consensus        91 ~a~~fD~~----G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l  156 (236)
T 1tl2_A           91 QFLFFDPN----GYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF  156 (236)
T ss_dssp             SEEEECTT----SCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred             eEEEECCC----CCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence            67889986    655555  669887776522  11221   11111111457899999999888766  6663

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=81.10  E-value=21  Score=29.06  Aligned_cols=151  Identities=12%  Similarity=0.168  Sum_probs=74.7

Q ss_pred             CeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCC---Ccc--eeeec--ccccccceeeeCCCCCCCccccccCCCCCC
Q psy2762         114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTN---SWE--SRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGG  186 (318)
Q Consensus       114 ~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~---~~~--~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~  186 (318)
                      .+..++|+|+  +.+.+.  .++.  +|.......   .|-  ...+-  +.. .-..+.|.|+                
T Consensus        42 ~~~~laf~P~--G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~----------------   98 (236)
T 1tl2_A           42 NFKFLFLSPG--GELYGV--LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPN----------------   98 (236)
T ss_dssp             TCSEEEECTT--SCEEEE--ETTE--EEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTT----------------
T ss_pred             cceeEEECCC--ccEEEE--eCCe--EEEECCCCCCcccccccccEecccccc-cceEEEECCC----------------
Confidence            5679999997  666666  5665  554432221   110  01110  000 1256667775                


Q ss_pred             ccceEEEecCCCeEEEEEccCC---eEEEE-EEc-ccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCC--cce
Q psy2762         187 VAKRLVSGGCDNLIKIWKQEGD---KWIEE-TKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDY--VTW  259 (318)
Q Consensus       187 ~~~~lasgs~d~~i~iwd~~~~---~~~~~-~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~--~~~  259 (318)
                       +...++  .||.|+-++.-++   .+.-. ..+ .+--..+..|.|.|+    |.+.+..  |+.+.-+.....  ..|
T Consensus        99 -G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~----G~Lyav~--dg~lyr~~~P~~~~~~w  169 (236)
T 1tl2_A           99 -GYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN----GYLYAVH--GQQFYKALPPVSNQDNW  169 (236)
T ss_dssp             -SCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT----SCEEEEE--TTEEEEECCCSSTTCCH
T ss_pred             -CCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC----ceEEEEe--CCcEEecCCCCCCCccc
Confidence             343444  6698887764221   11000 011 111134789999996    5555444  777433221100  011


Q ss_pred             ---eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         260 ---TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       260 ---~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                         ........-..-..+.|+|+|.+.+..  ++  +||.....
T Consensus       170 l~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~p  209 (236)
T 1tl2_A          170 LARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYPP  209 (236)
T ss_dssp             HHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESCC
T ss_pred             ccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCCc
Confidence               011111112234557799999888766  66  67876554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	318
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-15
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-12
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	8e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.004
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	8e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	9e-04
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-08
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.003
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-06
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.002
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.004
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.7 bits (200), Expect = 3e-18
 Identities = 57/328 (17%), Positives = 102/328 (31%), Gaps = 65/328 (19%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
           +GH   +       +   + + S D T+KV++ +            G     LKGH+  V
Sbjct: 14  SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE-----------TGDFERTLKGHTDSV 62

Query: 70  WQVAWAHPQF----------------------------------------GTLLASCSYD 89
             +++ H                                           G  + S S D
Sbjct: 63  QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122

Query: 90  RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS 149
           + + +W    G       +  H   V  +       G ++A  S+D T+      +    
Sbjct: 123 KTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECK 178

Query: 150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK 209
            E R+        +                +  K G     L+SG  D  IK+W      
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238

Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF-IMNTFD 268
            +    L  H +WVR V +          I SC+ D+ + +W   DY        +N  +
Sbjct: 239 CL--MTLVGHDNWVRGVLFHSGGKF----ILSCADDKTLRVW---DYKNKRCMKTLNAHE 289

Query: 269 DVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             V ++ +  T   +     D +V +W+
Sbjct: 290 HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 46/282 (16%)

Query: 55  KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
           +      L GH  PV +V + HP   +++ S S D  + +W  + G++ +      H  S
Sbjct: 6   RPPEKYALSGHRSPVTRVIF-HPV-FSVMVSASEDATIKVWDYETGDFER--TLKGHTDS 61

Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTI-------------- 160
           V  I++      L          +          +         ++              
Sbjct: 62  VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR 121

Query: 161 -GCNAVSWGPGIGSLSELDLKGSKLGGVA-----KRLVSGGCDNLIKIWKQEGDKWIEET 214
                +        +         +  V        + S   D  +++W     +     
Sbjct: 122 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--A 179

Query: 215 KLENHSDWVRDVAWAP----------------SWGLSKCMIASCSQDRKVIIWTSNDYVT 258
           +L  H   V  ++WAP                  G     + S S+D+ + +W   D  T
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW---DVST 236

Query: 259 WTP-FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
                 +   D+ V  V +   G  +     D ++ +W    
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 278

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.1 bits (180), Expect = 2e-15
 Identities = 34/314 (10%), Positives = 85/314 (27%), Gaps = 38/314 (12%)

Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
            H+  I    +     +  +CS D  +KV++      ++         + +   H   V 
Sbjct: 12  AHDADIFS--VSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69

Query: 71  QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN--------HDSSVNSIAWAP 122
           Q          L+A+ S+   ++ +R    +  K   +             S  ++ W  
Sbjct: 70  QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129

Query: 123 KEFGL---ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDL 179
               L    L      GT     +    +   S  +                G++     
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE-------LQGTVESPMT 182

Query: 180 KGSKLGGVA----KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLS 235
                  V       + +G  +  ++I +    + +   + ++      +   +  +   
Sbjct: 183 PSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242

Query: 236 KCMIASCSQDRKVIIWTSNDYVTWT--------------PFIMNTFDDVVWNVSWSLTGD 281
             ++A           T  +                             V ++S++ +G+
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302

Query: 282 ILTVSCGDNSVSLW 295
            L  +  D  +  W
Sbjct: 303 TLCSAGWDGKLRFW 316

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 38/321 (11%), Positives = 79/321 (24%), Gaps = 56/321 (17%)

Query: 25  GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA---HPQFGT 81
              +AT S    +  + + R  +      +K  L+ +        W + W          
Sbjct: 79  LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL-DSDMKKHSFWALKWGASNDRLLSH 137

Query: 82  LLASCSYDRKVIIWR----------------GDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
            L +        IW+                                    S+  + +  
Sbjct: 138 RLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 196

Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
             ++A G ++GT+      +    +      +     N++         S L +      
Sbjct: 197 --LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS 254

Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
                L        I                  HS WV  +++  S       + S   D
Sbjct: 255 FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG----ETLCSAGWD 310

Query: 246 RKVIIW-------------------TSNDYVTWTPFIMNTFDDVVWNVSW---------- 276
            K+  W                      D +       +  +  V++V +          
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 370

Query: 277 SLTGDILTVSCGDNSVSLWKE 297
           +   + L   C D S+  ++E
Sbjct: 371 ADLNESLCCVCLDRSIRWFRE 391

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.9 bits (117), Expect = 1e-07
 Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 33/272 (12%)

Query: 62  LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY---------NNHD 112
            K H   ++ V+       +   SCS D  + +W     +     +            H 
Sbjct: 10  GKAHDADIFSVSAC----NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65

Query: 113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT-------NSWESRKIAAHTIGCNAV 165
             V            ++A  S  G + F     +           +            A+
Sbjct: 66  VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125

Query: 166 SWGPGIGSLSELDLKGSKLGGVAK--RLVSGGCDNLIKIWKQEGDKWIEET--KLENHSD 221
            WG     L    L  + + G     +      ++            ++ T       S 
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185

Query: 222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM----NTFDDVVWNVSWS 277
           +   V  +      + +IA+   +  V I   +       F          + + +V +S
Sbjct: 186 FATSVDISE-----RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240

Query: 278 LTGDILTVSCGDNSVSLWKENTDGAWQCITEM 309
             G +L ++   NS            + I  +
Sbjct: 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSL 272

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.9 bits (164), Expect = 2e-13
 Identities = 40/189 (21%), Positives = 70/189 (37%), Gaps = 19/189 (10%)

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-----HDSSVNSIAWAPKE 124
                  P  G  +A+ S DR V +W  + G   +  +  N     H  SV S+ +    
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD- 265

Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
            G  +  GS D ++      +  N  +S+   + T     +     + S++         
Sbjct: 266 -GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA--------T 316

Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP--SWGLSKCMIASC 242
               + ++SG  D  +  W ++    +    L+ H + V  VA A   S G    + A+ 
Sbjct: 317 TQNDEYILSGSKDRGVLFWDKKSGNPL--LMLQGHRNSVISVAVANGSSLGPEYNVFATG 374

Query: 243 SQDRKVIIW 251
           S D K  IW
Sbjct: 375 SGDCKARIW 383

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.7 bits (135), Expect = 1e-09
 Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 9/136 (6%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDR-NLKKDDSHSQKGTLIAELKGHSGP 68
           TGH+D ++       G  + + S D +VK++NL   N K D      GT      GH   
Sbjct: 251 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 310

Query: 69  VWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF--- 125
           V  VA         + S S DR V+ W   +GN         H +SV S+A A       
Sbjct: 311 VLSVATTQN--DEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVANGSSLGP 366

Query: 126 -GLILACGSSDGTISF 140
              + A GS D     
Sbjct: 367 EYNVFATGSGDCKARI 382

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 15/89 (16%)

Query: 12  HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
           H+D +          Y+ + S D  V  ++            + G  +  L+GH   V  
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDK-----------KSGNPLLMLQGHRNSVIS 355

Query: 72  VAWAHPQF----GTLLASCSYDRKVIIWR 96
           VA A+         + A+ S D K  IW+
Sbjct: 356 VAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (114), Expect = 4e-07
 Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 45/307 (14%)

Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKK-------DDSHSQKGTLIAELK 63
            H  ++   +    G YLAT   + T +V+ +               +   +    +   
Sbjct: 60  DHTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118

Query: 64  GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPK 123
                +  V ++    G  LA+ + DR + IW  +N       + +  D        +  
Sbjct: 119 SSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG- 175

Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK 183
                       G+      + D  + +     +   G   V+  PG G           
Sbjct: 176 -------DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG----------- 217

Query: 184 LGGVAKRLVSGGCDNLIKIWKQEGDKWI-----EETKLENHSDWVRDVAWAP------SW 232
                K + +G  D  +++W  E    +     E      H D V  V +        S 
Sbjct: 218 -----KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272

Query: 233 GLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSV 292
            L + +     Q+      +                D V +V+ +   + +     D  V
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332

Query: 293 SLWKENT 299
             W + +
Sbjct: 333 LFWDKKS 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 65.1 bits (157), Expect = 1e-12
 Identities = 42/261 (16%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 62  LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
           L+GH   ++ + W       LL S S D K+IIW     N        +    V + A+A
Sbjct: 51  LRGHLAKIYAMHWGTD--SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS--WVMTCAYA 106

Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELD--- 178
           P    +      +  +I  L                                 S  D   
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166

Query: 179 --------------------LKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN 218
                               +    L    +  VSG CD   K+W        +      
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ--TFTG 224

Query: 219 HSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL 278
           H   +  + + P+        A+ S D    ++          +  +     + +VS+S 
Sbjct: 225 HESDINAICFFPN----GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280

Query: 279 TGDILTVSCGDNSVSLWKENT 299
           +G +L     D + ++W    
Sbjct: 281 SGRLLLAGYDDFNCNVWDALK 301

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.6 bits (153), Expect = 4e-12
 Identities = 25/192 (13%), Positives = 59/192 (30%), Gaps = 35/192 (18%)

Query: 12  HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQ 71
           H   +    +        + + D + K++++            +G       GH   +  
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-----------EGMCRQTFTGHESDINA 231

Query: 72  VAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILAC 131
           + +  P  G   A+ S D    ++          Y ++N    + S++++    G +L  
Sbjct: 232 ICF-FPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS--GRLLLA 287

Query: 132 GSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL 191
           G  D   +    +       +  +A H    + +                         +
Sbjct: 288 GYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTDD-----------------GMAV 327

Query: 192 VSGGCDNLIKIW 203
            +G  D+ +KIW
Sbjct: 328 ATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.0 bits (128), Expect = 8e-09
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 15/129 (11%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
           TGHE  I+       G   AT S D T ++F+L  + +                     +
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN---------IICGI 273

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
             V+++    G LL +   D    +W     +  +      HD+ V+ +       G+ +
Sbjct: 274 TSVSFSKS--GRLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSCLGVTDD--GMAV 327

Query: 130 ACGSSDGTI 138
           A GS D  +
Sbjct: 328 ATGSWDSFL 336

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 61.8 bits (148), Expect = 2e-11
 Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 19/281 (6%)

Query: 25  GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA 84
              +A C ++H V ++              K   + ELK H+G V  V WA       + 
Sbjct: 19  RTQIAICPNNHEVHIYEKS---------GNKWVQVHELKEHNGQVTGVDWAPD--SNRIV 67

Query: 85  SCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYM 144
           +C  DR   +W      W         + +   + WAP E    +  GS   +I +    
Sbjct: 68  TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127

Query: 145 SDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWK 204
           +D    +  K    +   +       +   +       ++     + V          W 
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVE--ERPAPTPWG 185

Query: 205 QEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIM 264
            +        +  +   WV  V ++ +       +A  S D  V +  ++  +       
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANG----SRVAWVSHDSTVCLADADKKMAVATLAS 241

Query: 265 NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC 305
            T    +  V++     ++        V    ++  G    
Sbjct: 242 ET--LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF 280

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 33/246 (13%), Positives = 64/246 (26%), Gaps = 8/246 (3%)

Query: 65  HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
              P+   AW      T +A C  + +V I+      W + +E   H+  V  + WAP  
Sbjct: 6   LVEPISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD- 62

Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
               +    +D      T    T       +  +                     +   +
Sbjct: 63  -SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121

Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
                         + K  K+     +       +S  +   +      +    I    +
Sbjct: 122 ----CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE 177

Query: 245 DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ 304
                 W S        F  ++    V  V +S  G  +     D++V L   +   A  
Sbjct: 178 RPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 237

Query: 305 CITEMG 310
            +    
Sbjct: 238 TLASET 243

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.4 bits (82), Expect = 0.004
 Identities = 33/247 (13%), Positives = 61/247 (24%), Gaps = 37/247 (14%)

Query: 12  HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHS-------QKGTLIAELKG 64
               +   +     + LA  S D   ++F+      ++             G L+ E   
Sbjct: 140 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 199

Query: 65  HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKE 124
             G V  V ++     + +A  S+D  V +   D                          
Sbjct: 200 SCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKMAVATLASETLPLLA----VTFIT 253

Query: 125 FGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL 184
              ++A G     + F        +++S        G   V        L+  +      
Sbjct: 254 ESSLVAAGHDCFPVLF--------TYDSAAGKLSFGGRLDVPKQSSQRGLTARER----- 300

Query: 185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ 244
                        NL K    EG           H + V  ++             +   
Sbjct: 301 -----------FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGM 349

Query: 245 DRKVIIW 251
           D  + IW
Sbjct: 350 DGGMSIW 356

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (140), Expect = 2e-10
 Identities = 39/298 (13%), Positives = 75/298 (25%), Gaps = 29/298 (9%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
            GH+D +    + + G  + + S D+T+KV++              G  +  L GH+G V
Sbjct: 13  KGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSA-----------VTGKCLRTLVGHTGGV 60

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
           W          +     +               + +               +      + 
Sbjct: 61  WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120

Query: 130 ACGSSDGTI--------SFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
                 G          + +  +               +          + +L     + 
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV 180

Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
             L      +VSG  D  I++W  E    I       H      +    +       + S
Sbjct: 181 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT--GHQSLTSGMELKDNI------LVS 232

Query: 242 CSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
            + D  V IW           +                 + +  S  D +V LW   T
Sbjct: 233 GNADSTVKIW-DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 8e-09
 Identities = 45/269 (16%), Positives = 79/269 (29%), Gaps = 31/269 (11%)

Query: 55  KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
           +      LKGH   V          G  + S S D  + +W    G   +      H   
Sbjct: 5   ELKSPKVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCLR--TLVGHTGG 59

Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL 174
           V S               +     +       T    +  +    +    V  G    +L
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 175 SELDLKGSKLGGV--------------AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS 220
              D++  +   V               +R+VSG  D ++K+W  E +  +    L+ H+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL--HTLQGHT 177

Query: 221 DWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTG 280
           + V  + +          + S S D  + +W     V     I              L  
Sbjct: 178 NRVYSLQFDGIH------VVSGSLDTSIRVW----DVETGNCIHTLTGHQSLTSGMELKD 227

Query: 281 DILTVSCGDNSVSLWKENTDGAWQCITEM 309
           +IL     D++V +W   T    Q +   
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGP 256

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (87), Expect = 9e-04
 Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 17/132 (12%)

Query: 21  MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
           M+     L + ++D TVK++++                                      
Sbjct: 223 MELKDNILVSGNADSTVKIWDIKTGQCLQTLQ------------GPNKHQSAVTCLQFNK 270

Query: 81  TLLASCSYDRKVIIWRGDNGNW---FKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137
             + + S D  V +W    G +       E       V  I  +     L+ A GS +GT
Sbjct: 271 NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT--KLVCAVGSRNGT 328

Query: 138 ISFLTYMSDTNS 149
                 + D + 
Sbjct: 329 EETKLLVLDFDV 340

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (132), Expect = 2e-09
 Identities = 28/298 (9%), Positives = 71/298 (23%), Gaps = 24/298 (8%)

Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVW 70
            H +++    +     ++ T      VKV+++          ++      +       + 
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS------HPGNKSPVSQLDCLNRDNYIR 101

Query: 71  QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILA 130
                    G  L        + IW           E  +   +  ++A +P        
Sbjct: 102 SCKLLPD--GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159

Query: 131 CGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS-------- 182
           C   +  +  L   +    ++     A  I  +        G L                
Sbjct: 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ 219

Query: 183 --KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC--M 238
                     L        + +  +  +  +      +        +   S   + C   
Sbjct: 220 QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279

Query: 239 IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
             S  +D  +  W             +     V +   S+    +    GD   ++++
Sbjct: 280 FVSTGKDNLLNAW---RTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.4 bits (121), Expect = 4e-08
 Identities = 34/335 (10%), Positives = 86/335 (25%), Gaps = 64/335 (19%)

Query: 8   VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSG 67
           ++   +D I D ++      L   S D ++ V+  D         ++   L+  L  +  
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ-------AKNVDLLQSL-RYKH 57

Query: 68  PVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN----------------- 110
           P+    +        +   +   +++         F+    N                  
Sbjct: 58  PLLCCNF-IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLI 116

Query: 111 ----------------------------HDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142
                                       +++ V +  +        L  G ++  + +  
Sbjct: 117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR 176

Query: 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202
                +   + + +        V+  P            S  G VA        D+    
Sbjct: 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC---SSIDGRVAVEFFDDQGDDYNSS 233

Query: 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF 262
            +          K  N +  V  + ++P        + +   D  +  W   +  T    
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRH----KFLYTAGSDGIISCW---NLQTRKKI 286

Query: 263 IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE 297
                 +    V  + + +IL ++  D++      
Sbjct: 287 KNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA 321

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 19/280 (6%), Positives = 60/280 (21%), Gaps = 28/280 (10%)

Query: 28  LATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS 87
               +    +   +LD       ++                ++  A +    G  + +  
Sbjct: 55  YVLNNHYGDIYGIDLDTCKNTFHANLSSVP-----GEVGRSMYSFAISP--DGKEVYATV 107

Query: 88  YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDT 147
              + +                        +   P    + L   + DG++         
Sbjct: 108 NPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYK 167

Query: 148 NSWESRKIAAHTIGCNAVS------------WGPGIGSLSELDLKGSKLGGVAKRLVSGG 195
              ++ K        N                         +    ++     +   +  
Sbjct: 168 MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 227

Query: 196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND 255
                     +  K   +    + ++       +P              +R         
Sbjct: 228 LLYGYLSVDLKTGKTHTQEF-ADLTELYFTGLRSPKDPN----QIYGVLNRLAKYDLKQR 282

Query: 256 YVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
            +     +    D   + V++   GD L +    N ++++
Sbjct: 283 KLIKAANL----DHTYYCVAFDKKGDKLYLGGTFNDLAVF 318

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 36.6 bits (83), Expect = 0.003
 Identities = 24/290 (8%), Positives = 57/290 (19%), Gaps = 35/290 (12%)

Query: 27  YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-VWQVAWAHPQFGTLLAS 85
           Y+   +  + + V ++              T+                   P   T    
Sbjct: 10  YMIVTNYPNNLHVVDVA-----------SDTVYKSCVMPDKFGPGTAMM-APDNRTAYVL 57

Query: 86  CSYDRKVIIWRGDNGNWFKYYEYNN----HDSSVNSIAWAPKEFGLILACGSSDGTISFL 141
            ++   +     D      +   ++       S+ S A +P    +      +       
Sbjct: 58  NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117

Query: 142 TYMS------DTNSWESRKIAAHTIGCNAVSW------GPGIGSLSELDLKGSKLGGVAK 189
                      T      K          V        G    +  ++     K G    
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTV 177

Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
            L     +            W  ++     S       +           A+       +
Sbjct: 178 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK----QDPATADLLYGYL 233

Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT 299
                   T T    +  +     +      D   +    N ++ +    
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSP--KDPNQIYGVLNRLAKYDLKQ 281

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (107), Expect = 2e-06
 Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 39/293 (13%)

Query: 21  MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG 80
           + Y    + +   D+T+K+++                    L GH+G V  + +      
Sbjct: 21  LQYDDQKIVSGLRDNTIKIWDK-----------NTLECKRILTGHTGSVLCLQYDERVII 69

Query: 81  TLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISF 140
           T  +  +     +           + E   H    N +     +   I     +  T   
Sbjct: 70  TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDIT 129

Query: 141 LTYMSDTNSWESRKIAAHTIGCNAVSW-----------GPGIGSLSELDLKGSKLGGVAK 189
           L  +   +      +        + S               + +L+      + L    +
Sbjct: 130 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDR 189

Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
            +VSG  DN I++W  E    +   +                       I S + D K+ 
Sbjct: 190 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--------KRIVSGAYDGKIK 241

Query: 250 IWTSNDYVTWTPF-------IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
           +W     +             +      V+ + +      +  S  D+++ +W
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIW 292

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.7 bits (106), Expect = 3e-06
 Identities = 34/304 (11%), Positives = 77/304 (25%), Gaps = 40/304 (13%)

Query: 25  GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLL 83
              +A                ++  D    K   + +  GH S  V  V ++  +    L
Sbjct: 29  TNAIAYPCGKSAF--------VRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYL 80

Query: 84  ASCSYDRKVIIWRGDNGNWFKY------YEYNNHDSSVNSIAWAPKEFGLILACGSSDGT 137
            S     KVI+W                 E+      ++ I+W  +   L +     D  
Sbjct: 81  CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF 140

Query: 138 ISFLTYMSDTNS--------WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
             F+++ S  +           +      +    +++ G     +               
Sbjct: 141 GVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT 200

Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM----------- 238
               G     ++     G+  I        S +         +                 
Sbjct: 201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW 260

Query: 239 -----IASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSV 292
                 A+   D  + +W          + ++        V    TG+   +S   D ++
Sbjct: 261 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320

Query: 293 SLWK 296
           + ++
Sbjct: 321 NFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 15/111 (13%), Positives = 32/111 (28%), Gaps = 7/111 (6%)

Query: 65  HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS-VNSIAWAPK 123
                  +++  P    +   C     V      +       ++  H SS V ++ ++P 
Sbjct: 16  QRNFTTHLSY-DPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI 74

Query: 124 EFGLILACGSSDGTISFLTYMSDTNSWE-----SRKIAAHTIGCNAVSWGP 169
           +    L  G   G +    +  D  S         +        + +SW  
Sbjct: 75  KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.0 bits (107), Expect = 3e-06
 Identities = 44/322 (13%), Positives = 98/322 (30%), Gaps = 50/322 (15%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
            GH   +    + +   Y+ T + D  ++V++                 + +L GH G V
Sbjct: 9   RGHMTSVITC-LQFEDNYVITGADDKMIRVYDS-----------INKKFLLQLSGHDGGV 56

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
           W + +AH   G +L S S DR V +W          + +  H+S+V  +     +    +
Sbjct: 57  WALKYAH---GGILVSGSTDRTVRVWD--IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 111

Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP-------------------- 169
             GS D T+       +++  +  +   + +  +     P                    
Sbjct: 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 171

Query: 170 ------------GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLE 217
                        +  ++++       G   +   +       +      D  I    LE
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 231

Query: 218 NHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS 277
           N              GL +                  D   ++        ++    ++ 
Sbjct: 232 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291

Query: 278 LTGDILTVSCGDNSVSLWKENT 299
           ++ +IL VS  +N  +++   +
Sbjct: 292 VSDNIL-VSGSENQFNIYNLRS 312

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 26/203 (12%)

Query: 62  LKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWA 121
           L+GH   V             + + + D+ + ++   N  +    + + HD  V ++ +A
Sbjct: 8   LRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLL--QLSGHDGGVWALKYA 62

Query: 122 PKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKG 181
               G IL  GS+D T+          +       +     + V +              
Sbjct: 63  H---GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI----------- 108

Query: 182 SKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIAS 241
                  K +V+G  DN + +WK   +  + +   E+    V        + +       
Sbjct: 109 -------KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 161

Query: 242 CSQDRKVIIWTSNDYVTWTPFIM 264
            S              ++   ++
Sbjct: 162 ASVRTVSGHGNIVVSGSYDNTLI 184

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.2 bits (102), Expect = 1e-05
 Identities = 33/290 (11%), Positives = 63/290 (21%), Gaps = 9/290 (3%)

Query: 11  GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLD-----RNLKKDDSHSQKGTLIAELKGH 65
           GH   I        G  L +  ++  +  +++      R      +    G         
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69

Query: 66  SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF 125
               W         G      S      +     G            +    IA      
Sbjct: 70  FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129

Query: 126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLG 185
              +    +   ++                        A                 +   
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189

Query: 186 GVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQD 245
             A  + +     +I        +         H+  V  V+W+P        +A+ S D
Sbjct: 190 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN----VRLATGSLD 245

Query: 246 RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW 295
             VI+W  N        I         N    L    +  +  D+++  W
Sbjct: 246 NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.4 bits (92), Expect = 1e-04
 Identities = 32/272 (11%), Positives = 66/272 (24%), Gaps = 16/272 (5%)

Query: 56  GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSV 115
           G++     GH+  +  ++ +    G  L S   +  +  W    G   + +  + H + +
Sbjct: 2   GSIDQVRYGHNKAITALSSSAD--GKTLFSADAEGHINSWDISTGISNRVFP-DVHATMI 58

Query: 116 NSIAWAPKEFGLILAC------------GSSDGTISFLTYMSDTNSWESRKIAAHTIGCN 163
             I    K     ++             G            S              +   
Sbjct: 59  TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 118

Query: 164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWV 223
                                  VA            +  K    K    +  E  +   
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178

Query: 224 RDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL 283
                + ++  +   + +  Q RKVI ++  +          TF             ++ 
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 238

Query: 284 TVSCG-DNSVSLWKENTDGAWQCITEMGKTSE 314
             +   DNSV +W  N       I +      
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS 270

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.1 bits (94), Expect = 8e-05
 Identities = 31/287 (10%), Positives = 87/287 (30%), Gaps = 11/287 (3%)

Query: 10  TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV 69
           +GH   I    ++ L     + S D  +  ++     +          +++     +   
Sbjct: 10  SGHNKGITALTVNPL----ISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDNSKAQEY 60

Query: 70  WQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLIL 129
             ++W        +    +  +  +   +N  +      ++    + S      +   + 
Sbjct: 61  SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120

Query: 130 ACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAK 189
           + GS+         +        +      +  +     P     S + +  S+    A 
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180

Query: 190 RLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVI 249
            ++       ++  + +  +W   T   N   W      A    + + ++A+ S D  + 
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240

Query: 250 IWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWK 296
           I++    +      +N   D V N+ W     +++    D  +  W 
Sbjct: 241 IYSVKRPMKII-KALNAHKDGVNNLLWETPSTLVSSG-ADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (81), Expect = 0.004
 Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 16/113 (14%)

Query: 55  KGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSS 114
              ++  + GH+  +  +          L S SYD +++ W   +        + +H + 
Sbjct: 2   HDEVLKTISGHNKGITALTVNP------LISGSYDGRIMEWSSSSM-------HQDHSNL 48

Query: 115 VNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW 167
           + S+  +        +  S D T+            + +  +A+  G  AV  
Sbjct: 49  IVSLDNSK---AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLT 98

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.9 bits (91), Expect = 2e-04
 Identities = 34/267 (12%), Positives = 62/267 (23%), Gaps = 29/267 (10%)

Query: 54  QKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDS 113
              T       HS        +    G   AS      V IW                  
Sbjct: 46  GSLTDTEIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSG 103

Query: 114 SVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS 173
            V  I+W  +   +       +       + + T++      A      +     P    
Sbjct: 104 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRII 163

Query: 174 LSELDLKGSKLGGVAK------------------------RLVSGGCDNLIKIWKQEGDK 209
               D   +   G                              +GG   ++     +G K
Sbjct: 164 SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 223

Query: 210 WIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW-TSNDYVTWTPFIMNTFD 268
                     +       +  +W      IAS S D+ + IW  +   V  T  +    +
Sbjct: 224 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 283

Query: 269 DVVWNVSWSLTGDILTVSCGDNSVSLW 295
           D    + W+     L     +  ++  
Sbjct: 284 DQQLGIIWT--KQALVSISANGFINFV 308

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 21/291 (7%), Positives = 63/291 (21%), Gaps = 26/291 (8%)

Query: 27  YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWA-HPQFGTLLAS 85
           Y+   +    + V + +           K  +   +         +     P      A+
Sbjct: 3   YILAPARPDKLVVIDTE-----------KMAVDKVITIADAGPTPMVPMVAPGGRIAYAT 51

Query: 86  CSYDRKVIIWRGDNGN---WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLT 142
            +    ++      G                S+   A +P      LA   S   +    
Sbjct: 52  VNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK--TLAIYESPVRLELTH 109

Query: 143 YMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI 202
           +               +      +           D       G    ++      L++ 
Sbjct: 110 FEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED 169

Query: 203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCM------IASCSQDRKVIIWTSNDY 256
              +  +     + +  + W +  +                     +    ++     D 
Sbjct: 170 KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM---DL 226

Query: 257 VTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCIT 307
            T    +       V+  S ++           N +  +    + + + + 
Sbjct: 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVP 277

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	318
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.93
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.93
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.93
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.93
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.91
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.9
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.89
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.87
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.86
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.86
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.84
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.8
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.79
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.78
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.73
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.7
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.68
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.51
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.5
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.4
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.39
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.39
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.13
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.07
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.02
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.01
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.95
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.95
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.92
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.86
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.81
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.77
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.72
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.68
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.59
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.53
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.02
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	97.87
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.62
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.45
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	97.42
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.42
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.2
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.12
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.01
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	94.77
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	94.75
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	94.36
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.55
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	86.0
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	84.68
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	83.63
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	82.04

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.9e-40  Score=283.95  Aligned_cols=272  Identities=22%  Similarity=0.345  Sum_probs=207.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCC-----CC--------------------------CCCcc
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKD-----DS--------------------------HSQKG   56 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~-----~~--------------------------~~~~~   56 (318)
                      .+.||++.|++++|+|++++|+|||.||+|+|||+.......     ..                          .....
T Consensus        12 ~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (317)
T d1vyhc1          12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF   91 (317)
T ss_dssp             EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred             EEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccc
Confidence            457999999999999999999999999999999986321000     00                          00011


Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      .....+.+|...+.++.|.+  ++..+++++.|+.+++||+.++..  ...+.+|...+.+++|+|+  +.++++++.|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~l~~~~~d~  165 (317)
T d1vyhc1          92 ECIRTMHGHDHNVSSVSIMP--NGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQD--GTLIASCSNDQ  165 (317)
T ss_dssp             CEEECCCCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTT--SSEEEEEETTS
T ss_pred             ccccccccccccceeeeccC--CCceEEeeccCcceeEeeccccee--eeEEccCCCcceeeecccC--CCEEEEEeCCC
Confidence            12233344455555555532  477899999999999999988764  3456789999999999998  67899999999


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCC---CCCCccceEEEecCCCeEEEEEccCCeEEEE
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGS---KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE  213 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~---~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~  213 (318)
                      .|++|+.....   ....+..|...+..+.|+|+............   .....+..+++++.|+.|++||..++++  .
T Consensus       166 ~v~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~  240 (317)
T d1vyhc1         166 TVRVWVVATKE---CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--L  240 (317)
T ss_dssp             CEEEEETTTCC---EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE--E
T ss_pred             eEEEEeeccce---eeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcE--E
Confidence            99999875433   34456688888999999997533222111111   1112246799999999999999988864  4


Q ss_pred             EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy2762         214 TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVS  293 (318)
Q Consensus       214 ~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~  293 (318)
                      .++.+|...|++++|+|+    +.+|++++.|++|+|||+.+..  ....+.+|.+.|.+++|+|++++|++++.||+|+
T Consensus       241 ~~~~~~~~~v~~~~~~~~----~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~  314 (317)
T d1vyhc1         241 MTLVGHDNWVRGVLFHSG----GKFILSCADDKTLRVWDYKNKR--CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK  314 (317)
T ss_dssp             EEEECCSSCEEEEEECSS----SSCEEEEETTTEEEEECCTTSC--CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred             EEEeCCCCCEEEEEECCC----CCEEEEEECCCeEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEE
Confidence            567899999999999996    7899999999999999998754  2456678999999999999999999999999999


Q ss_pred             EEE
Q psy2762         294 LWK  296 (318)
Q Consensus       294 iW~  296 (318)
                      |||
T Consensus       315 iWd  317 (317)
T d1vyhc1         315 VWE  317 (317)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            996

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.3e-39  Score=283.70  Aligned_cols=250  Identities=15%  Similarity=0.189  Sum_probs=206.9

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+.+.||++.|++++|+|++++|+|||.||+|+|||+.           +++.+.++.+|.++|.+++|++  ++.+|++
T Consensus        48 ~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~-----------~~~~~~~~~~~~~~v~~v~~~~--~~~~l~~  114 (340)
T d1tbga_          48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSY-----------TTNKVHAIPLRSSWVMTCAYAP--SGNYVAC  114 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-----------TTEEEEEEECSCSCEEEEEECT--TSSEEEE
T ss_pred             eEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecc-----------cceeEEEEecccccEEeeEeec--cceeeee
Confidence            45678999999999999999999999999999999986           4577889999999999999974  5899999


Q ss_pred             EECCCeEEEEeCCCCcE--EEEE-----------------------------------------EecCCCcCeEEEEeeC
Q psy2762          86 CSYDRKVIIWRGDNGNW--FKYY-----------------------------------------EYNNHDSSVNSIAWAP  122 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~--~~~~-----------------------------------------~~~~h~~~v~~v~~~p  122 (318)
                      |+.|+++++|+......  ....                                         ....+...+....+.+
T Consensus       115 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (340)
T d1tbga_         115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP  194 (340)
T ss_dssp             EETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT
T ss_pred             ecccceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccc
Confidence            99999999998643210  0011                                         1112334566666666


Q ss_pred             CCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEE
Q psy2762         123 KEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       123 ~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~i  202 (318)
                      .  ..++++++.|+.|++||+....   ....+.+|..+|.+++|+|+                 +.+|++|+.|+.|++
T Consensus       195 ~--~~~~~~~~~d~~v~i~d~~~~~---~~~~~~~h~~~i~~v~~~p~-----------------~~~l~s~s~d~~i~~  252 (340)
T d1tbga_         195 D--TRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFFPN-----------------GNAFATGSDDATCRL  252 (340)
T ss_dssp             T--SSEEEEEETTTEEEEEETTTTE---EEEEECCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEE
T ss_pred             c--cceeEEeecCceEEEEECCCCc---EEEEEeCCCCCeEEEEECCC-----------------CCEEEEEeCCCeEEE
Confidence            5  5689999999999999974432   34456689999999999997                 468999999999999


Q ss_pred             EEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCE
Q psy2762         203 WKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDI  282 (318)
Q Consensus       203 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~  282 (318)
                      ||..............|...|.+++|+|+    +.+|++++.|++|+|||+.+..  ....+.+|.++|.+++|+|||++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~H~~~V~~l~~s~d~~~  326 (340)
T d1tbga_         253 FDLRADQELMTYSHDNIICGITSVSFSKS----GRLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSCLGVTDDGMA  326 (340)
T ss_dssp             EETTTTEEEEEECCTTCCSCEEEEEECSS----SCEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSC
T ss_pred             EeecccccccccccccccCceEEEEECCC----CCEEEEEECCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEeCCCCE
Confidence            99988766555556678888999999996    8899999999999999987754  34566789999999999999999


Q ss_pred             EEEEeCCCeEEEEE
Q psy2762         283 LTVSCGDNSVSLWK  296 (318)
Q Consensus       283 l~s~~~D~~v~iW~  296 (318)
                      |+||+.||+|+|||
T Consensus       327 l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         327 VATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEETTSCEEEEC
T ss_pred             EEEEccCCEEEEeC
Confidence            99999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.8e-39  Score=287.97  Aligned_cols=258  Identities=19%  Similarity=0.303  Sum_probs=211.3

Q ss_pred             CcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      +.++|++++|+|+|++||+|+.|+.|+|||++..         ....+..+++|.++|++++|++  ++++|+||+.|++
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~---------~~~~~~~l~gH~~~V~~l~fsp--~~~~l~s~s~D~~   74 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN---------KWVQVHELKEHNGQVTGVDWAP--DSNRIVTCGTDRN   74 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT---------EEEEEEEEECCSSCEEEEEEET--TTTEEEEEETTSC
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCC---------CEEEEEEecCCCCCEEEEEECC--CCCEEEEEECCCe
Confidence            4678999999999999999999999999998632         2356788999999999999974  5899999999999


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee-eecccccccceeeeCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR-KIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~  170 (318)
                      |+|||+.++...+...+.+|...|.+++|+|+  +..+++++.|++|++|++.......... ....|...|.+++|+|+
T Consensus        75 i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~--~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~  152 (371)
T d1k8kc_          75 AYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN  152 (371)
T ss_dssp             EEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT
T ss_pred             EEEEeecccccccccccccccccccccccccc--cccceeecccCcceeeeeeccccccccccccccccccccccccccc
Confidence            99999988776677777889999999999998  6789999999999999987655322222 23478889999999997


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCe----------------EEEEEEcccCCCCeeEEEEccCCCC
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDK----------------WIEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~----------------~~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                                       +.+||+|+.|++|++|+.....                ........+|...|++++|+|+   
T Consensus       153 -----------------~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---  212 (371)
T d1k8kc_         153 -----------------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN---  212 (371)
T ss_dssp             -----------------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS---
T ss_pred             -----------------ccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecc---
Confidence                             4789999999999999965321                0123456789999999999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC-CCceEEE
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT-DGAWQCI  306 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~-~~~~~~~  306 (318)
                       +.+|++++.|++|++||.....  ....+..|..+|.+++|+|||++|++| .|+.+++|..+. .+.+...
T Consensus       213 -g~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~  281 (371)
T d1k8kc_         213 -GSRVAWVSHDSTVCLADADKKM--AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFG  281 (371)
T ss_dssp             -SSEEEEEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEEC
T ss_pred             -cccccccccCCcceEEeeeccc--ceeeeecccccceeeeecCCCCEEEEE-cCCceEEEEeeCCCceEEEe
Confidence             7899999999999999997754  344566788899999999999888755 578888887655 3344443

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=274.94  Aligned_cols=253  Identities=14%  Similarity=0.221  Sum_probs=208.5

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR   90 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg   90 (318)
                      +|...|++++|+|+|++|+||+ ||+|+|||+.....      ..........+|.+.|.+++|++  ++++|++|+.|+
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~------~~~~~~~~~~~h~~~I~~v~~s~--dg~~l~s~~~dg  119 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN------KSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGGEAS  119 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC------CSCSEEEECSCTTSBEEEEEECT--TSSEEEEEESSS
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcc------cceeEEeeecCCCCcEEEEEEcC--CCCEEEEeeccc
Confidence            7999999999999999999987 89999999964311      11123445668999999999974  589999999999


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCC
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG  170 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~  170 (318)
                      +|++||+..........+..|...+.+++|+|+  +.++++++.|+.|.+|+.....   .......|..++.+++|+|+
T Consensus       120 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~~~~~~~---~~~~~~~~~~~v~~l~~s~~  194 (337)
T d1gxra_         120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPD--SKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISND  194 (337)
T ss_dssp             EEEEEECCCC--EEEEEEECSSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc---cccccccccccccccccccc
Confidence            999999876554555667789999999999998  6789999999999999874332   23445578899999999986


Q ss_pred             CCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEE
Q psy2762         171 IGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVII  250 (318)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~v  250 (318)
                                       +..+++++.|+.|++||+++++....   ..|...|++++|+|+    +.+|++++.|+.+++
T Consensus       195 -----------------~~~~~~~~~d~~v~i~d~~~~~~~~~---~~~~~~i~~l~~~~~----~~~l~~~~~d~~i~i  250 (337)
T d1gxra_         195 -----------------GTKLWTGGLDNTVRSWDLREGRQLQQ---HDFTSQIFSLGYCPT----GEWLAVGMESSNVEV  250 (337)
T ss_dssp             -----------------SSEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEECTT----SSEEEEEETTSCEEE
T ss_pred             -----------------ccccccccccccccccccccceeecc---cccccceEEEEEccc----ccccceecccccccc
Confidence                             46899999999999999988765433   357888999999996    789999999999999


Q ss_pred             EEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         251 WTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       251 w~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      |+.....   ......|...|.+++|+|+|++|++++.|++|++||...+....
T Consensus       251 ~d~~~~~---~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~  301 (337)
T d1gxra_         251 LHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF  301 (337)
T ss_dssp             EETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             ccccccc---cccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEE
Confidence            9998754   23456788999999999999999999999999999987764443

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.9e-38  Score=276.43  Aligned_cols=250  Identities=20%  Similarity=0.275  Sum_probs=199.5

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .++.+|++.|++++|+|+|++|++|+.||+|+|||+...         .......+.+|.+.|.+++|++  ++++|+++
T Consensus        52 ~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~v~~v~~s~--d~~~l~~~  120 (311)
T d1nr0a1          52 EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT---------THILKTTIPVFSGPVKDISWDS--ESKRIAAV  120 (311)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST---------TCCEEEEEECSSSCEEEEEECT--TSCEEEEE
T ss_pred             EEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecc---------ccccccccccccCccccccccc--cccccccc
Confidence            356799999999999999999999999999999999732         2234567889999999999974  58999999


Q ss_pred             EC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          87 SY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        87 s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +.  ++.++||+.++++.  ..++.+|...|.+++|+|+. ..++++|+.|+.|++||.....   ....+..|..+|.+
T Consensus       121 ~~~~~~~~~v~~~~~~~~--~~~l~~h~~~v~~v~~~~~~-~~~l~sgs~d~~i~i~d~~~~~---~~~~~~~~~~~i~~  194 (311)
T d1nr0a1         121 GEGRERFGHVFLFDTGTS--NGNLTGQARAMNSVDFKPSR-PFRIISGSDDNTVAIFEGPPFK---FKSTFGEHTKFVHS  194 (311)
T ss_dssp             ECCSSCSEEEEETTTCCB--CBCCCCCSSCEEEEEECSSS-SCEEEEEETTSCEEEEETTTBE---EEEEECCCSSCEEE
T ss_pred             cccccccccccccccccc--cccccccccccccccccccc-eeeecccccccccccccccccc---cccccccccccccc
Confidence            86  46699999987753  34567899999999999984 3468899999999999974322   23455689999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEE-----EcccCCCCeeEEEEccCCCCCccEE
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEET-----KLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~-----~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      +.|+|+                 +.+|++++.|+.|++||...++.....     ...+|...|++++|+|+    +.+|
T Consensus       195 v~~~p~-----------------~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~----~~~l  253 (311)
T d1nr0a1         195 VRYNPD-----------------GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD----GTKI  253 (311)
T ss_dssp             EEECTT-----------------SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT----SSEE
T ss_pred             cccCcc-----------------ccccccccccccccccccccccccccccccccccccccccccccccCCC----CCEE
Confidence            999997                 478999999999999998876543222     23468999999999996    7899


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEeeecC---CcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMNTFD---DVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~~~~---~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ++|+.|++|+|||+.+...  ...+..+.   ..+.++.|  +++.|++++.||.|++||.+
T Consensus       254 ~tgs~Dg~v~iwd~~t~~~--~~~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         254 ASASADKTIKIWNVATLKV--EKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEETTSEEEEEETTTTEE--EEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred             EEEeCCCeEEEEECCCCcE--EEEEECCCCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence            9999999999999987542  23333332   34555555  56689999999999999853

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-37  Score=272.57  Aligned_cols=243  Identities=15%  Similarity=0.205  Sum_probs=206.6

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|.+.|++++|+|+|++|++|+.|++|+|||+...         .......+..|...|.++.|++  ++.+|++++.
T Consensus        93 ~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~  161 (337)
T d1gxra_          93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---------TPRIKAELTSSAPACYALAISP--DSKVCFSCCS  161 (337)
T ss_dssp             CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEEEECT--TSSEEEEEET
T ss_pred             ecCCCCcEEEEEEcCCCCEEEEeeccccccccccccc---------cccccccccccccccccccccc--cccccccccc
Confidence            4589999999999999999999999999999998632         3456778889999999999963  5899999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeC
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWG  168 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~  168 (318)
                      |+.|++|++.+++.  ......|...|.+++|+|+  +..+++++.|+.|++|++....    ......|..++.+++|+
T Consensus       162 d~~i~~~~~~~~~~--~~~~~~~~~~v~~l~~s~~--~~~~~~~~~d~~v~i~d~~~~~----~~~~~~~~~~i~~l~~~  233 (337)
T d1gxra_         162 DGNIAVWDLHNQTL--VRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGR----QLQQHDFTSQIFSLGYC  233 (337)
T ss_dssp             TSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----EEEEEECSSCEEEEEEC
T ss_pred             cccccccccccccc--ccccccccccccccccccc--ccccccccccccccccccccce----eecccccccceEEEEEc
Confidence            99999999988763  3345678999999999998  6789999999999999974332    22334678889999999


Q ss_pred             CCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeE
Q psy2762         169 PGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKV  248 (318)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i  248 (318)
                      |+                 +.+|++|+.|+.|++||+..++.   .....|...|++++|+|+    +.+|++++.|+.|
T Consensus       234 ~~-----------------~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~i~~v~~s~~----g~~l~s~s~Dg~i  289 (337)
T d1gxra_         234 PT-----------------GEWLAVGMESSNVEVLHVNKPDK---YQLHLHESCVLSLKFAYC----GKWFVSTGKDNLL  289 (337)
T ss_dssp             TT-----------------SSEEEEEETTSCEEEEETTSSCE---EEECCCSSCEEEEEECTT----SSEEEEEETTSEE
T ss_pred             cc-----------------ccccceecccccccccccccccc---ccccccccccceEEECCC----CCEEEEEeCCCeE
Confidence            96                 46899999999999999987754   345689999999999996    7899999999999


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      ++|+.....   ......|...|.+++|+|||++|++++.||+|+|||+
T Consensus       290 ~iwd~~~~~---~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         290 NAWRTPYGA---SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEETTTCC---EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEEECCCCC---EEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999988754   2233467889999999999999999999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.4e-37  Score=272.92  Aligned_cols=255  Identities=16%  Similarity=0.237  Sum_probs=206.5

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD   89 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D   89 (318)
                      ..+++.+..++++|+|+.|+.++ ++.|.+||++.           +.....+.+|.+.|++++|++  +|++||+|+.|
T Consensus        14 ~~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~-----------~~~~~~~~~H~~~v~~~~~sp--~g~~latg~~d   79 (311)
T d1nr0a1          14 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGS-----------LTDTEIYTEHSHQTTVAKTSP--SGYYCASGDVH   79 (311)
T ss_dssp             CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTC-----------SSCCEEECCCSSCEEEEEECT--TSSEEEEEETT
T ss_pred             CCCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCC-----------CceeEEEcCCCCCEEEEEEeC--CCCeEeccccC
Confidence            45666778899999999999876 67899999963           344567889999999999974  59999999999


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeec--CCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSS--DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~--d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      |+|+|||+.+........+..|..+|.+++|+|+  +.++++++.  +..+++|++....   ....+.+|...|.+++|
T Consensus        80 g~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d--~~~l~~~~~~~~~~~~v~~~~~~~---~~~~l~~h~~~v~~v~~  154 (311)
T d1nr0a1          80 GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDTGT---SNGNLTGQARAMNSVDF  154 (311)
T ss_dssp             SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEEEEETTTCC---BCBCCCCCSSCEEEEEE
T ss_pred             ceEeeeeeeccccccccccccccCcccccccccc--cccccccccccccccccccccccc---ccccccccccccccccc
Confidence            9999999988765455567789999999999998  667777765  4568999875433   23456789999999999


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK  247 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~  247 (318)
                      +|+.                ...|++|+.|++|++||+++++.  ...+.+|...|+++.|+|+    +.+|++++.|+.
T Consensus       155 ~~~~----------------~~~l~sgs~d~~i~i~d~~~~~~--~~~~~~~~~~i~~v~~~p~----~~~l~~~~~d~~  212 (311)
T d1nr0a1         155 KPSR----------------PFRIISGSDDNTVAIFEGPPFKF--KSTFGEHTKFVHSVRYNPD----GSLFASTGGDGT  212 (311)
T ss_dssp             CSSS----------------SCEEEEEETTSCEEEEETTTBEE--EEEECCCSSCEEEEEECTT----SSEEEEEETTSC
T ss_pred             cccc----------------eeeeccccccccccccccccccc--ccccccccccccccccCcc----cccccccccccc
Confidence            9963                23589999999999999988754  4567889999999999996    789999999999


Q ss_pred             EEEEEcCCCcceee-----EEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         248 VIIWTSNDYVTWTP-----FIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       248 i~vw~~~~~~~~~~-----~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      |++|+.........     ....+|.+.|.+++|+|+|++|++++.||+|+|||.+++...++
T Consensus       213 v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~  275 (311)
T d1nr0a1         213 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT  275 (311)
T ss_dssp             EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence            99999876532110     11235778999999999999999999999999999877643333

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.6e-37  Score=266.16  Aligned_cols=253  Identities=16%  Similarity=0.238  Sum_probs=194.3

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCcEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      +.++..||.+.|++++|+|+|++|+||+.||+|+|||++           +++.+.++ .+|.+.|++++|++  ++. +
T Consensus         4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~-----------~~~~~~~~~~~h~~~v~~v~~~~--~g~-~   69 (299)
T d1nr0a2           4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS-----------TGISNRVFPDVHATMITGIKTTS--KGD-L   69 (299)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------TCCEEECSSCSCSSCEEEEEECT--TSC-E
T ss_pred             cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECC-----------CCcEEEEEcCCCCCcEEEEEeec--cce-e
Confidence            566789999999999999999999999999999999996           34566666 47999999999974  354 6


Q ss_pred             EEEECCCeEEEEeCCCCc--------------E-------------------EEEEE-----ecCCCcCeEEEEeeCCCC
Q psy2762          84 ASCSYDRKVIIWRGDNGN--------------W-------------------FKYYE-----YNNHDSSVNSIAWAPKEF  125 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~--------------~-------------------~~~~~-----~~~h~~~v~~v~~~p~~~  125 (318)
                      ++++.|+++++|+.....              .                   ...+.     .......+.+++|+|+  
T Consensus        70 ~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~--  147 (299)
T d1nr0a2          70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND--  147 (299)
T ss_dssp             EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT--
T ss_pred             ecccceeeEEEeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence            678889999999864210              0                   00000     0012345778889987  


Q ss_pred             CcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEc
Q psy2762         126 GLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQ  205 (318)
Q Consensus       126 ~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~  205 (318)
                      +.++++|+.|+.|.+||+....  ........|..++.+++|+|+                 +.+|++++.|+.|++||.
T Consensus       148 ~~~l~~g~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~~~~~  208 (299)
T d1nr0a2         148 KQFVAVGGQDSKVHVYKLSGAS--VSEVKTIVHPAEITSVAFSNN-----------------GAFLVATDQSRKVIPYSV  208 (299)
T ss_dssp             SCEEEEEETTSEEEEEEEETTE--EEEEEEEECSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEEG
T ss_pred             cccccccccccccccccccccc--ccccccccccccccccccccc-----------------cccccccccccccccccc
Confidence            6789999999999999985432  112233478889999999996                 468999999999999998


Q ss_pred             cCCeE-EEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee-cCCcEEEEEEcCCCCEE
Q psy2762         206 EGDKW-IEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT-FDDVVWNVSWSLTGDIL  283 (318)
Q Consensus       206 ~~~~~-~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~-~~~~v~~v~~spdg~~l  283 (318)
                      .++.. .....+.+|...|++++|+|+    +.+|++++.|++|+||++............. +...|..+.| |++++|
T Consensus       209 ~~~~~~~~~~~~~~h~~~v~~l~~s~~----~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l  283 (299)
T d1nr0a2         209 ANNFELAHTNSWTFHTAKVACVSWSPD----NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTI  283 (299)
T ss_dssp             GGTTEESCCCCCCCCSSCEEEEEECTT----SSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEE
T ss_pred             ccccccccccccccccccccccccccc----ccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEE
Confidence            76543 233456789999999999996    8899999999999999988754322222223 3456776655 567899


Q ss_pred             EEEeCCCeEEEEEE
Q psy2762         284 TVSCGDNSVSLWKE  297 (318)
Q Consensus       284 ~s~~~D~~v~iW~~  297 (318)
                      ++++.|++|||||+
T Consensus       284 ~s~s~D~~i~iWdl  297 (299)
T d1nr0a2         284 VSAGQDSNIKFWNV  297 (299)
T ss_dssp             EEEETTSCEEEEEC
T ss_pred             EEEeCCCEEEEEec
Confidence            99999999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-35  Score=263.50  Aligned_cols=264  Identities=20%  Similarity=0.304  Sum_probs=194.2

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCC---CCC--C--CcceEEEEecccccCeEEEEecCCCCCcEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKD---DSH--S--QKGTLIAELKGHSGPVWQVAWAHPQFGTLL   83 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~---~~~--~--~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l   83 (318)
                      +|++.|++++|+|+|++||+|+ |++|+|||+.+.....   ...  .  ..........+|...|++++|++  ++++|
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~~~l  136 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKFL  136 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT--TSSEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECC--CCCcc
Confidence            6999999999999999999987 9999999986321100   000  0  00011223446888899999974  58999


Q ss_pred             EEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          84 ASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        84 as~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      ++|+.||+|++||...++.  ...+.+|...|.+++++++  +..+++++.++.|++|+.....    ......+.....
T Consensus       137 ~s~~~dg~v~i~~~~~~~~--~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~  208 (388)
T d1erja_         137 ATGAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQ----CSLTLSIEDGVT  208 (388)
T ss_dssp             EEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTE----EEEEEECSSCEE
T ss_pred             eeccccccccccccccccc--ccccccccccccccccccc--cccccccccceeeeeeeccccc----cccccccccccc
Confidence            9999999999999987764  3456789999999999998  6788999999999999874321    222223334445


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE-----EEcccCCCCeeEEEEccCCCCCccE
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE-----TKLENHSDWVRDVAWAPSWGLSKCM  238 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~-----~~~~~h~~~V~~v~~sp~~~~~~~~  238 (318)
                      .+.+.|..                +.+|++|+.|+.|++|+..++.....     ....+|...|+++.|+|+    +.+
T Consensus       209 ~~~~~~~~----------------~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~----~~~  268 (388)
T d1erja_         209 TVAVSPGD----------------GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD----GQS  268 (388)
T ss_dssp             EEEECSTT----------------CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT----SSE
T ss_pred             cccccCCC----------------CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCC----CCE
Confidence            56666532                46899999999999999887654322     223578999999999996    789


Q ss_pred             EEEEeCCCeEEEEEcCCCcce----------eeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEE
Q psy2762         239 IASCSQDRKVIIWTSNDYVTW----------TPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQC  305 (318)
Q Consensus       239 l~s~s~D~~i~vw~~~~~~~~----------~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~  305 (318)
                      |++++.|+.|++|++......          .......|...|.+++|+|+|++|++|+.||+|++||+.++.....
T Consensus       269 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~  345 (388)
T d1erja_         269 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM  345 (388)
T ss_dssp             EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             EEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence            999999999999998764311          1122345678999999999999999999999999999887654443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=258.63  Aligned_cols=250  Identities=22%  Similarity=0.348  Sum_probs=198.2

Q ss_pred             cCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762           9 DTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus         9 ~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      ..+|...|++++|+|+|++|++|+.||+|++||..           .++.+..+.+|...|+++.|++  ++..+++++.
T Consensus       117 ~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~-----------~~~~~~~~~~h~~~v~~~~~~~--~~~~~~~~~~  183 (388)
T d1erja_         117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE-----------NRKIVMILQGHEQDIYSLDYFP--SGDKLVSGSG  183 (388)
T ss_dssp             --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT-----------TTEEEEEECCCSSCEEEEEECT--TSSEEEEEET
T ss_pred             ccCCCCCEEEEEECCCCCcceeccccccccccccc-----------cccccccccccccccccccccc--cccccccccc
Confidence            35788999999999999999999999999999986           3567888899999999999964  4889999999


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc----eeeecccccccce
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE----SRKIAAHTIGCNA  164 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~----~~~~~~h~~~v~~  164 (318)
                      ++.+++||..+.....  ... +.....++.++|.+ +.++++++.|+.|++|+.........    .....+|..+|.+
T Consensus       184 ~~~i~~~d~~~~~~~~--~~~-~~~~~~~~~~~~~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~  259 (388)
T d1erja_         184 DRTVRIWDLRTGQCSL--TLS-IEDGVTTVAVSPGD-GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS  259 (388)
T ss_dssp             TSEEEEEETTTTEEEE--EEE-CSSCEEEEEECSTT-CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred             ceeeeeeecccccccc--ccc-cccccccccccCCC-CCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEE
Confidence            9999999998765333  223 44556667777653 67899999999999999754431111    1123368889999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE----------EEEEEcccCCCCeeEEEEccCCCC
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW----------IEETKLENHSDWVRDVAWAPSWGL  234 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~----------~~~~~~~~h~~~V~~v~~sp~~~~  234 (318)
                      +.|+|+                 +.+|++|+.|+.|++||+.....          ........|...|.+++|+|+   
T Consensus       260 l~~s~~-----------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---  319 (388)
T d1erja_         260 VVFTRD-----------------GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN---  319 (388)
T ss_dssp             EEECTT-----------------SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG---
T ss_pred             EEECCC-----------------CCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCC---
Confidence            999997                 46899999999999999865421          122345678999999999996   


Q ss_pred             CccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEE------EcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         235 SKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVS------WSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       235 ~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~------~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                       +.+|++|+.|++|++||+.+..  ....+.+|.+.|.+++      |+|++++|+||+.||+|+||+++
T Consensus       320 -~~~l~sg~~dg~i~vwd~~~~~--~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         320 -DEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             -GCEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             -CCEEEEEeCCCEEEEEECCCCc--EEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence             8899999999999999998754  3456778999999987      56799999999999999999964

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.6e-34  Score=256.51  Aligned_cols=255  Identities=16%  Similarity=0.162  Sum_probs=197.2

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+.||.+.|++++|+|++++|+|||.|++|+|||+...         .......+.+|...|+++.|++  +++.|++++
T Consensus        46 ~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~---------~~~~~~~~~~~~~~v~~i~~~p--~~~~l~~~s  114 (371)
T d1k8kc_          46 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR---------TWKPTLVILRINRAARCVRWAP--NEKKFAVGS  114 (371)
T ss_dssp             EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT---------EEEEEEECCCCSSCEEEEEECT--TSSEEEEEE
T ss_pred             EecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc---------cccccccccccccccccccccc--ccccceeec
Confidence            34699999999999999999999999999999999632         3345667788999999999964  589999999


Q ss_pred             CCCeEEEEeCCCCc--EEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCC---------------c
Q psy2762          88 YDRKVIIWRGDNGN--WFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNS---------------W  150 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~---------------~  150 (318)
                      .|++|++|++....  .........|...|.+++|+|+  +.++++|+.|++|++|+.......               .
T Consensus       115 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~--~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~  192 (371)
T d1k8kc_         115 GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN--SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE  192 (371)
T ss_dssp             TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT--SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred             ccCcceeeeeeccccccccccccccccccccccccccc--ccceeccccCcEEEEEeeccCcccccccccccccccccee
Confidence            99999999876543  2233445678899999999998  678999999999999997533210               0


Q ss_pred             ceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEcc
Q psy2762         151 ESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAP  230 (318)
Q Consensus       151 ~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp  230 (318)
                      .......|...+..++|+|+                 +++|++++.|++|++||...+..  ...+..|..+|++++|+|
T Consensus       193 ~~~~~~~~~~~v~~~~~s~~-----------------g~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~s~~fs~  253 (371)
T d1k8kc_         193 LMFESSSSCGWVHGVCFSAN-----------------GSRVAWVSHDSTVCLADADKKMA--VATLASETLPLLAVTFIT  253 (371)
T ss_dssp             EEEECCCCSSCEEEEEECSS-----------------SSEEEEEETTTEEEEEEGGGTTE--EEEEECSSCCEEEEEEEE
T ss_pred             eeeeccCccCcEEEEEeecc-----------------cccccccccCCcceEEeeecccc--eeeeecccccceeeeecC
Confidence            11223467788899999996                 46899999999999999987754  456778999999999999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCCCcc-ee-------e-------------------------------EEeeecCCcE
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSNDYVT-WT-------P-------------------------------FIMNTFDDVV  271 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~-~~-------~-------------------------------~~~~~~~~~v  271 (318)
                      +    +.+|++ +.|+.+++|....... +.       +                               .....|...|
T Consensus       254 d----~~~la~-g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I  328 (371)
T d1k8kc_         254 E----SSLVAA-GHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV  328 (371)
T ss_dssp             T----TEEEEE-ETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCE
T ss_pred             C----CCEEEE-EcCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCE
Confidence            6    666665 5577777765433110 00       0                               0011266789


Q ss_pred             EEEEEcCCC----CEEEEEeCCCeEEEEEECC
Q psy2762         272 WNVSWSLTG----DILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       272 ~~v~~spdg----~~l~s~~~D~~v~iW~~~~  299 (318)
                      .++++.|.+    ..|+|+|.||.|+||+++.
T Consensus       329 ~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         329 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             EEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             EEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            999998865    4589999999999999744

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-34  Score=248.58  Aligned_cols=244  Identities=21%  Similarity=0.355  Sum_probs=182.5

Q ss_pred             eeecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           6 NLVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         6 ~~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      .+++.||++.|.+ +++++|++|||||.||+|+|||+.           +++++.++.+|.+.|++++|+    +++|++
T Consensus         9 ~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~-----------~~~~~~~~~~h~~~V~~v~~~----~~~l~s   72 (342)
T d2ovrb2           9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAV-----------TGKCLRTLVGHTGGVWSSQMR----DNIIIS   72 (342)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETT-----------TCCEEEECCCCSSCEEEEEEE----TTEEEE
T ss_pred             CEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECC-----------CCCEEEEEeCCCCCEEEEEeC----CCcccc
Confidence            3456899999875 477789999999999999999986           357889999999999999995    358999


Q ss_pred             EECCCeEEEEeCCCCcEE--------------------------------------------------------------
Q psy2762          86 CSYDRKVIIWRGDNGNWF--------------------------------------------------------------  103 (318)
Q Consensus        86 ~s~Dg~v~vWd~~~~~~~--------------------------------------------------------------  103 (318)
                      |+.|+++++|+.......                                                              
T Consensus        73 ~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (342)
T d2ovrb2          73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVS  152 (342)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEE
T ss_pred             ceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeee
Confidence            999999999986431100                                                              


Q ss_pred             ----------------EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762         104 ----------------KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus       104 ----------------~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                                      ....+.+|...+..+.+  +  +.++++++.|+.|++|++....   ......+|...+..+++
T Consensus       153 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~l~s~~~dg~i~~~d~~~~~---~~~~~~~~~~~v~~~~~  225 (342)
T d2ovrb2         153 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRVWDVETGN---CIHTLTGHQSLTSGMEL  225 (342)
T ss_dssp             EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSCEEEEETTTCC---EEEEECCCCSCEEEEEE
T ss_pred             ecCCCeEEEeecccceeeEEEcCcccccccccC--C--CCEEEEEeCCCeEEEeecccce---eeeEecccccceeEEec
Confidence                            01122233333333333  3  4468888888888888864332   34455577777777777


Q ss_pred             CCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE-EEcccCCCCeeEEEEccCCCCCccEEEEEeCCC
Q psy2762         168 GPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE-TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDR  246 (318)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~-~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~  246 (318)
                      ++                   ++|++|+.|+.|++||....+.... .....|...+.++.|+|      .++++++.||
T Consensus       226 ~~-------------------~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~s~Dg  280 (342)
T d2ovrb2         226 KD-------------------NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK------NFVITSSDDG  280 (342)
T ss_dssp             ET-------------------TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS------SEEEEEETTS
T ss_pred             CC-------------------CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC------CeeEEEcCCC
Confidence            65                   4799999999999999887654322 22345677788888865      4899999999


Q ss_pred             eEEEEEcCCCcceeeEEe-----eecCCcEEEEEEcCCCCEEEEEeCCCe----EEEEEECC
Q psy2762         247 KVIIWTSNDYVTWTPFIM-----NTFDDVVWNVSWSLTGDILTVSCGDNS----VSLWKENT  299 (318)
Q Consensus       247 ~i~vw~~~~~~~~~~~~~-----~~~~~~v~~v~~spdg~~l~s~~~D~~----v~iW~~~~  299 (318)
                      +|+|||+.+...  ...+     .+|...|++++|+|++.+||+|+.||+    |++||.+.
T Consensus       281 ~i~iwd~~tg~~--i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         281 TVKLWDLKTGEF--IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEEEETTTCCE--EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEEEEECCCCCE--EEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            999999987542  2222     246678999999999999999999996    99999775

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5e-34  Score=251.28  Aligned_cols=261  Identities=16%  Similarity=0.209  Sum_probs=189.7

Q ss_pred             cCCC-cceeeeeeecC--CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEE
Q psy2762           9 DTGH-EDMIHDAEMDY--LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus         9 ~~gH-~~~v~~~~~~~--~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las   85 (318)
                      ..|| ...|++++|+|  +|++|+||+.||+|+|||+......   ..........+..|.++|.+++|++  ++++|++
T Consensus        58 ~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~---~~~~~~~~~~~~~~~~~v~~v~~s~--~~~~l~~  132 (325)
T d1pgua1          58 FTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKES---NSVEVNVKSEFQVLAGPISDISWDF--EGRRLCV  132 (325)
T ss_dssp             ECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGG---TEEEEEEEEEEECCSSCEEEEEECT--TSSEEEE
T ss_pred             EeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcce---eeeecccccccccccCcEEEEEECC--CCCccce
Confidence            3577 56899999998  6789999999999999998532100   0001122345678999999999974  5888887


Q ss_pred             EEC--CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          86 CSY--DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        86 ~s~--Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      ++.  |+.+++|+..+++  ....+.+|...|.+++|+|+. ..++++++.|+.|++|+...............|...+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~  209 (325)
T d1pgua1         133 VGEGRDNFGVFISWDSGN--SLGEVSGHSQRINACHLKQSR-PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR  209 (325)
T ss_dssp             EECCSSCSEEEEETTTCC--EEEECCSCSSCEEEEEECSSS-SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEE
T ss_pred             eeccccceEEEEeecccc--cceeeeecccccccccccccc-cceEEEeecccccccccccccccceecccccCCCCccE
Confidence            765  6789999988776  445677899999999999984 35678899999999998643221111122236777899


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +++|+|+.                +.+|++++.|+.|++||+++++.  ..++.+|..++.++.|++.+. ++.+|++++
T Consensus       210 ~v~~~pd~----------------~~~l~s~~~d~~i~iwd~~~~~~--~~~l~~~~~~v~~~~~s~~~~-dg~~l~s~s  270 (325)
T d1pgua1         210 DVEFSPDS----------------GEFVITVGSDRKISCFDGKSGEF--LKYIEDDQEPVQGGIFALSWL-DSQKFATVG  270 (325)
T ss_dssp             EEEECSTT----------------CCEEEEEETTCCEEEEETTTCCE--EEECCBTTBCCCSCEEEEEES-SSSEEEEEE
T ss_pred             Eeeecccc----------------ceeccccccccceeeeeeccccc--cccccccccccccceeeeecc-CCCEEEEEe
Confidence            99999963                46899999999999999988764  456788988887777763211 378999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcE--EEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVV--WNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v--~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      .|++|+|||+.............+...+  ..+.|.+++ +|++++.||+|+|||+
T Consensus       271 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         271 ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT-EEEEEETTSCEEEEET
T ss_pred             CCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCC-EEEEEECCCEEEEEEC
Confidence            9999999999875421111122222233  344554444 7889999999999984

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-33  Score=243.39  Aligned_cols=263  Identities=21%  Similarity=0.328  Sum_probs=181.0

Q ss_pred             ecCCCccee-eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           8 VDTGHEDMI-HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         8 ~~~gH~~~v-~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      .+.||.+.| +|+  ++++++|+||+.||+|+|||+.           +++++.++++|.++|++++|++   +.+|+||
T Consensus         7 tL~GH~~~vitc~--~~~~~~l~tgs~Dg~i~vWd~~-----------~~~~~~~l~~H~~~V~~l~~s~---~~~l~s~   70 (355)
T d1nexb2           7 TLRGHMTSVITCL--QFEDNYVITGADDKMIRVYDSI-----------NKKFLLQLSGHDGGVWALKYAH---GGILVSG   70 (355)
T ss_dssp             EEECCSSSCEEEE--EEETTEEEEEETTTEEEEEETT-----------TTEEEEEEECCSSCEEEEEEET---TTEEEEE
T ss_pred             EECCcCCCcEEEE--EECCCEEEEEeCCCeEEEEECC-----------CCcEEEEEECCCCCEEEEEEcC---CCEEEEE
Confidence            356998886 554  5578999999999999999986           4678999999999999999963   4689999


Q ss_pred             ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce--------------
Q psy2762          87 SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES--------------  152 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~--------------  152 (318)
                      +.|++|++|+..............+...+..+.+.++  +.++++++.|+.|++|++.........              
T Consensus        71 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~  148 (355)
T d1nexb2          71 STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN--IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE  148 (355)
T ss_dssp             ETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETT--EEEEEEEETTSEEEEEECCC-----------CCCEEESCTT
T ss_pred             ecccccccccccccccccccccccccccccccccccc--cceeeeecCCCcEEEEEccCCceeccccccceeccceeccc
Confidence            9999999999988765444433344445566677776  678999999999999997543210000              


Q ss_pred             ------eeecccccccceeeeCCC-------CCCCccccccC---------C-------CCCCccceEEEecCCCeEEEE
Q psy2762         153 ------RKIAAHTIGCNAVSWGPG-------IGSLSELDLKG---------S-------KLGGVAKRLVSGGCDNLIKIW  203 (318)
Q Consensus       153 ------~~~~~h~~~v~~~~~~p~-------~~~~~~~~~~~---------~-------~~~~~~~~lasgs~d~~i~iw  203 (318)
                            .....|...+......+.       .+.+...+...         .       .+...+.++++++.|++|++|
T Consensus       149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~  228 (355)
T d1nexb2         149 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW  228 (355)
T ss_dssp             TCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred             cccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEee
Confidence                  000011111111111110       00000001100         0       011224679999999999999


Q ss_pred             EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE-EEcCCCCE
Q psy2762         204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV-SWSLTGDI  282 (318)
Q Consensus       204 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v-~~spdg~~  282 (318)
                      |..++..  ...+.+|...|.++.|+|      .+|++++.|++|++||+.+..    ..+..|...+..+ .|+|++++
T Consensus       229 d~~~~~~--~~~~~~h~~~v~~~~~~~------~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~  296 (355)
T d1nexb2         229 DLENGEL--MYTLQGHTALVGLLRLSD------KFLVSAAADGSIRGWDANDYS----RKFSYHHTNLSAITTFYVSDNI  296 (355)
T ss_dssp             ETTTCCE--EEEECCCSSCCCEEEECS------SEEEEECTTSEEEEEETTTCC----EEEEEECTTCCCCCEEEECSSE
T ss_pred             ecccccc--cccccccccccccccccc------ceeeeeecccccccccccccc----eecccccCCceEEEEEcCCCCE
Confidence            9988764  456789999999999976      479999999999999998753    2334455555555 56777877


Q ss_pred             EEEEeCCCeEEEEEECCCC
Q psy2762         283 LTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       283 l~s~~~D~~v~iW~~~~~~  301 (318)
                      |+++ .|++|+|||++++.
T Consensus       297 l~~g-~d~~i~vwd~~tg~  314 (355)
T d1nexb2         297 LVSG-SENQFNIYNLRSGK  314 (355)
T ss_dssp             EEEE-ETTEEEEEETTTCC
T ss_pred             EEEE-eCCEEEEEECCCCC
Confidence            7665 58999999987654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-32  Score=234.85  Aligned_cols=236  Identities=20%  Similarity=0.327  Sum_probs=182.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...|+|+.  ++|++|||||.||+|+|||+.           +++++.++++|.+.|++++|.    +++|+||+
T Consensus        10 ~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~-----------~~~~~~~l~~H~~~V~~v~~~----~~~l~s~s   72 (293)
T d1p22a2          10 CRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKN-----------TLECKRILTGHTGSVLCLQYD----ERVIITGS   72 (293)
T ss_dssp             CCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESS-----------SCCEEEEECCCSSCEEEEECC----SSEEEEEE
T ss_pred             ccCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECC-----------CCcEEEEEecCCCCEeeeecc----cceeeccc
Confidence            3467899999875  479999999999999999996           357889999999999999983    68999999


Q ss_pred             CCCeEEEEeCCCCcEE-----------------------------------------EEEEecCCCcCeEEEEeeCCCCC
Q psy2762          88 YDRKVIIWRGDNGNWF-----------------------------------------KYYEYNNHDSSVNSIAWAPKEFG  126 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~-----------------------------------------~~~~~~~h~~~v~~v~~~p~~~~  126 (318)
                      .|++|++|++..+...                                         ....+..|...+.++.+.+.   
T Consensus        73 ~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---  149 (293)
T d1p22a2          73 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---  149 (293)
T ss_dssp             TTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT---
T ss_pred             ccccccccccccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceeccc---
Confidence            9999999997542210                                         11223345566666666653   


Q ss_pred             cEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEcc
Q psy2762         127 LILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQE  206 (318)
Q Consensus       127 ~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~  206 (318)
                       .+++++.|+.|++|+.....   ....+.+|...+..+.+++                   .+|++++.|++|+|||++
T Consensus       150 -~~~~~s~d~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~dg~i~i~d~~  206 (293)
T d1p22a2         150 -YIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRD-------------------RLVVSGSSDNTIRLWDIE  206 (293)
T ss_dssp             -EEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEEET-------------------TEEEEEETTSCEEEEETT
T ss_pred             -ccccccCCCceeeecCCCCc---EEEEEcccccccccccCCC-------------------CeEEEecCCCEEEEEecc
Confidence             57788999999999975433   2345567777777777764                   479999999999999998


Q ss_pred             CCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-------ceeeEEeeecCCcEEEEEEcCC
Q psy2762         207 GDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-------TWTPFIMNTFDDVVWNVSWSLT  279 (318)
Q Consensus       207 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-------~~~~~~~~~~~~~v~~v~~spd  279 (318)
                      +...  ...+.+|...|..+.+  +    +.+|++++.|+.|++|++....       ......+.+|.+.|++|+|  |
T Consensus       207 ~~~~--~~~~~~~~~~v~~~~~--~----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~--d  276 (293)
T d1p22a2         207 CGAC--LRVLEGHEELVRCIRF--D----NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--D  276 (293)
T ss_dssp             TCCE--EEEECCCSSCEEEEEC--C----SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--C
T ss_pred             ccee--eeeecccceeeeeccc--c----ceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE--c
Confidence            8764  3456788888876544  2    5689999999999999964321       1123456788999999999  4


Q ss_pred             CCEEEEEeCCCeEEEEE
Q psy2762         280 GDILTVSCGDNSVSLWK  296 (318)
Q Consensus       280 g~~l~s~~~D~~v~iW~  296 (318)
                      +++|+|+|.||+|+|||
T Consensus       277 ~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         277 EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             SSCEEECCSSSEEEEEC
T ss_pred             CCEEEEEecCCEEEEeC
Confidence            67899999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.4e-33  Score=238.65  Aligned_cols=240  Identities=15%  Similarity=0.187  Sum_probs=179.2

Q ss_pred             eecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEE
Q psy2762           7 LVDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASC   86 (318)
Q Consensus         7 ~~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~   86 (318)
                      +.+.||.++|++++|+|    |+|||.||+|++||+..                ..++|+..|.++.+. +  +..++++
T Consensus         7 ~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~----------------~~~~h~~~V~~~~~~-~--~~~~~s~   63 (287)
T d1pgua2           7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS----------------MHQDHSNLIVSLDNS-K--AQEYSSI   63 (287)
T ss_dssp             EEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE----------------EECCCCSCEEEEECC-S--TTCCEEE
T ss_pred             EEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC----------------CCCCCCCCEEEEEec-C--CCeEEEE
Confidence            45689999999999987    89999999999999851                236899999999985 2  5678999


Q ss_pred             ECCCeEEEEeCCCCc-----------------------EEEE---------EEecCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          87 SYDRKVIIWRGDNGN-----------------------WFKY---------YEYNNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        87 s~Dg~v~vWd~~~~~-----------------------~~~~---------~~~~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      +.|+++++|++...+                       ....         ..+. +...+  .+++|+  +..+++++.
T Consensus        64 s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~--~~~~~v~~~  138 (287)
T d1pgua2          64 SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPG--SAVSLS--QNYVAVGLE  138 (287)
T ss_dssp             ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE--EEEEEC--SSEEEEEET
T ss_pred             eeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecc-cccee--eeeecc--Ccceeeecc
Confidence            999999999864210                       0000         0111 11222  344555  335555555


Q ss_pred             C-CeEEEEEeecCCCCcceeee-cccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE
Q psy2762         135 D-GTISFLTYMSDTNSWESRKI-AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       135 d-~~i~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~  212 (318)
                      + +.|++|+.....   ....+ ..|..++.+++|+|+                 +.+|++|+.||.|++||..+++. .
T Consensus       139 ~~~~v~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~-----------------~~~l~~g~~dg~i~i~d~~~~~~-~  197 (287)
T d1pgua2         139 EGNTIQVFKLSDLE---VSFDLKTPLRAKPSYISISPS-----------------ETYIAAGDVMGKILLYDLQSREV-K  197 (287)
T ss_dssp             TTSCEEEEETTEEE---EEEECSSCCSSCEEEEEECTT-----------------SSEEEEEETTSCEEEEETTTTEE-E
T ss_pred             ccceeeeeeccccc---eeeeeeeccCCceeEEEeccC-----------------ccccccccccccccceeeccccc-c
Confidence            5 579999863221   11222 257778999999997                 47899999999999999988764 3


Q ss_pred             EEEcccCCCCeeEEEEccCCC------CCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEE
Q psy2762         213 ETKLENHSDWVRDVAWAPSWG------LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVS  286 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~------~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~  286 (318)
                      ...+.+|...|++++|+|...      .++.+|+|||.|++|+||+++.... ....+.+|.+.|.+++|+|++ .|+|+
T Consensus       198 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~-~~~~~~~h~~~V~~v~~~~~~-~l~s~  275 (287)
T d1pgua2         198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK-IIKALNAHKDGVNNLLWETPS-TLVSS  275 (287)
T ss_dssp             ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC-CEEETTSSTTCEEEEEEEETT-EEEEE
T ss_pred             cccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe-EEEEeCCCCCCeEEEEECCCC-EEEEE
Confidence            445789999999999999642      3567899999999999999876432 234566899999999999987 58899


Q ss_pred             eCCCeEEEEEE
Q psy2762         287 CGDNSVSLWKE  297 (318)
Q Consensus       287 ~~D~~v~iW~~  297 (318)
                      +.|++||||++
T Consensus       276 g~D~~v~iW~i  286 (287)
T d1pgua2         276 GADACIKRWNV  286 (287)
T ss_dssp             ETTSCEEEEEE
T ss_pred             ECCCeEEEEEE
Confidence            99999999986

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-32  Score=248.07  Aligned_cols=264  Identities=13%  Similarity=0.145  Sum_probs=182.0

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe------EEEEecCCCCCc
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV------WQVAWAHPQFGT   81 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V------~~v~~~~~~~~~   81 (318)
                      ...||++.|+++++++  ++|+|||.|++|+|||......   .  ...........|...+      ..+... ..+..
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDN---E--NPKDKSYSHFVHKSGLHHVDVLQAIERD-AFELC   80 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTT---C--CGGGGEEEEECCTTCEEEEEEEEEEETT-TEEEE
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCC---C--cccceeEeeeeccCCceEeeeEeeeccC-CCCCc
Confidence            4579999999999864  6999999999999999752210   0  0011122223344332      223322 22456


Q ss_pred             EEEEEECCCeEEEEeCCCCcE---EEEEEe-----cCCCcCeEEEEeeCCCC---CcEEEEeecCCeEEEEEeecCCCCc
Q psy2762          82 LLASCSYDRKVIIWRGDNGNW---FKYYEY-----NNHDSSVNSIAWAPKEF---GLILACGSSDGTISFLTYMSDTNSW  150 (318)
Q Consensus        82 ~las~s~Dg~v~vWd~~~~~~---~~~~~~-----~~h~~~v~~v~~~p~~~---~~~lasgs~d~~i~i~~~~~~~~~~  150 (318)
                      ++++++.||.|++|++.....   ......     ..+...+..++|.++..   ..++++++.|+.|++|++.......
T Consensus        81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~  160 (393)
T d1sq9a_          81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES  160 (393)
T ss_dssp             EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred             EEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccc
Confidence            889999999999998653321   111111     12445678888887642   4678999999999999985332100


Q ss_pred             --------c-------eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE--
Q psy2762         151 --------E-------SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE--  213 (318)
Q Consensus       151 --------~-------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~--  213 (318)
                              .       ......+...+.+++|+|+                  .+||+|+.|++|+|||+.++++...  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d------------------g~lasgs~Dg~i~iwd~~~~~~~~~~~  222 (393)
T d1sq9a_         161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISER------------------GLIATGFNNGTVQISELSTLRPLYNFE  222 (393)
T ss_dssp             HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT------------------SEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred             ceeeeeeccceecccceecccCCCCcEEEEEECCC------------------CEEEEEeCCCcEEEEeecccccccccc
Confidence                    0       0011123445678888885                  3799999999999999988764332  


Q ss_pred             --EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCe---EEEEEcCCCccee-----------eEEeeecCCcEEEEEEc
Q psy2762         214 --TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRK---VIIWTSNDYVTWT-----------PFIMNTFDDVVWNVSWS  277 (318)
Q Consensus       214 --~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~---i~vw~~~~~~~~~-----------~~~~~~~~~~v~~v~~s  277 (318)
                        ..+.+|..+|++|+|+|+    +.+|++||.|++   |++||++......           ...+.+|.+.|++|+|+
T Consensus       223 ~~~~l~~h~~~V~~l~~spd----g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fs  298 (393)
T d1sq9a_         223 SQHSMINNSNSIRSVKFSPQ----GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN  298 (393)
T ss_dssp             CCC---CCCCCEEEEEECSS----TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred             cccccccccceEEEcccccc----cceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccC
Confidence              345689999999999996    889999999975   8999987653111           11234688999999999


Q ss_pred             CCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         278 LTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       278 pdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      |||++|+|+|.|++|||||+.++.
T Consensus       299 pd~~~l~S~s~D~~v~vWd~~~g~  322 (393)
T d1sq9a_         299 DSGETLCSAGWDGKLRFWDVKTKE  322 (393)
T ss_dssp             SSSSEEEEEETTSEEEEEETTTTE
T ss_pred             CCCCeeEEECCCCEEEEEECCCCC
Confidence            999999999999999999988763

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-32  Score=238.08  Aligned_cols=252  Identities=17%  Similarity=0.223  Sum_probs=187.9

Q ss_pred             eeeeeeecCCCCEEEEeeCCC-cEEEEEcCCCcCCCCCCCCcceEEEEeccc-ccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDH-TVKVFNLDRNLKKDDSHSQKGTLIAELKGH-SGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      .+++++|+|+|++|+.++.+. .|+.|+....         ....+..+.+| ...|++++|+|..++.+||||+.||+|
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~---------~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i   89 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS---------KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV   89 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCC---------SSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCC---------CccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCE
Confidence            567899999999999876543 3455654321         22345677887 468999999765578999999999999


Q ss_pred             EEEeCCCCcE------EEEEEecCCCcCeEEEEeeCCCCCcEEEEee--cCCeEEEEEeecCCCCcceeeecccccccce
Q psy2762          93 IIWRGDNGNW------FKYYEYNNHDSSVNSIAWAPKEFGLILACGS--SDGTISFLTYMSDTNSWESRKIAAHTIGCNA  164 (318)
Q Consensus        93 ~vWd~~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs--~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~  164 (318)
                      +|||+..+..      .....+..|..+|.+++|+|+  +.++++++  .++.+.+|+...+.   ....+.+|...+.+
T Consensus        90 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~  164 (325)
T d1pgua1          90 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDSGN---SLGEVSGHSQRINA  164 (325)
T ss_dssp             EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTTCC---EEEECCSCSSCEEE
T ss_pred             EEeeecCCcceeeeecccccccccccCcEEEEEECCC--CCccceeeccccceEEEEeecccc---cceeeeeccccccc
Confidence            9999754321      112234568899999999998  55555554  46778888864332   34566789999999


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE-EEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE-ETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~-~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      ++|+|+.                ...+++++.|+.|++||....+... ...+.+|...|++++|+|+   .+.+|++++
T Consensus       165 ~~~~~~~----------------~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd---~~~~l~s~~  225 (325)
T d1pgua1         165 CHLKQSR----------------PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD---SGEFVITVG  225 (325)
T ss_dssp             EEECSSS----------------SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST---TCCEEEEEE
T ss_pred             ccccccc----------------cceEEEeecccccccccccccccceecccccCCCCccEEeeeccc---cceeccccc
Confidence            9999963                2357899999999999987654322 2335678889999999997   478999999


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc---CCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS---LTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s---pdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      .|+.|++||.....  ....+..|..++.++.|+   |||++|++++.|++|+|||++.+.
T Consensus       226 ~d~~i~iwd~~~~~--~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~  284 (325)
T d1pgua1         226 SDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK  284 (325)
T ss_dssp             TTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred             cccceeeeeecccc--ccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence            99999999987654  234455566555444444   689999999999999999988753

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-31  Score=232.42  Aligned_cols=262  Identities=15%  Similarity=0.092  Sum_probs=182.5

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      +..+|++.|++++|+|++++||+||.||+|+|||++..        .....+....+|.++|.+++|+++ .+.+|++|+
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~--------~~~~~~~~~~~h~~~V~~v~f~~~-~~~~l~sg~   76 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ--------AKNVDLLQSLRYKHPLLCCNFIDN-TDLQIYVGT   76 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT--------TTEEEEEEEEECSSCEEEEEEEES-SSEEEEEEE
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCC--------CcceEEEEecCCCCCEEEEEEeCC-CCCEEEEcc
Confidence            56899999999999999999999999999999998632        111233444579999999999753 577999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce-eeeccccc--ccce
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES-RKIAAHTI--GCNA  164 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~-~~~~~h~~--~v~~  164 (318)
                      .|++|++|+.......... ...+........+.++  ...+++++.|+++++||.+........ .....+..  ....
T Consensus        77 ~d~~v~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~  153 (342)
T d1yfqa_          77 VQGEILKVDLIGSPSFQAL-TNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI  153 (342)
T ss_dssp             TTSCEEEECSSSSSSEEEC-BSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred             cccceeeeecccccccccc-cccccccccccccccc--cccccccccccccceeeccccccceeeecccccccccceeee
Confidence            9999999998876543322 1223333344445554  567889999999999987544321111 11111111  1122


Q ss_pred             eeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-EEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         165 VSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-EETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      ..+.+.                 ...+++++.|+.|++||+...+.. .......+...+.++.+.|.   ++..+++++
T Consensus       154 ~~~~~~-----------------~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s  213 (342)
T d1yfqa_         154 FTMDTN-----------------SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK---EQEGYACSS  213 (342)
T ss_dssp             EEEEEC-----------------SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG---GGCEEEEEE
T ss_pred             eeeecc-----------------CCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecC---CCCEEEeec
Confidence            222222                 357999999999999998754321 12223445556777777775   578899999


Q ss_pred             CCCeEEEEEcCCCcce------eeE-------EeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCC
Q psy2762         244 QDRKVIIWTSNDYVTW------TPF-------IMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~------~~~-------~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~  301 (318)
                      .|+.+.+|+.......      ...       ....|...|.+++|+|++++||||+.||+|+|||++...
T Consensus       214 ~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~  284 (342)
T d1yfqa_         214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             CCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc
Confidence            9999999987653210      000       012345679999999999999999999999999987753

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.7e-30  Score=224.60  Aligned_cols=234  Identities=22%  Similarity=0.318  Sum_probs=172.0

Q ss_pred             eEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC
Q psy2762          57 TLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG  136 (318)
Q Consensus        57 ~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~  136 (318)
                      ...++|+||.+.|++++|++  ++++||||+.||+|+|||+.+++.  ...+..|...|.+++|+|+  +.++++++.|+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~--~~~~l~sgs~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~v~~~~~--~~~l~~~~~d~  119 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGT--DSRLLVSASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPS--GNYVACGGLDN  119 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTTEE--EEEEECSCSCEEEEEECTT--SSEEEEEETTC
T ss_pred             eeeEEECCCCCCEEEEEECC--CCCEEEEEECCCceeeeeccccee--EEEEecccccEEeeEeecc--ceeeeeecccc
Confidence            45688999999999999974  589999999999999999998764  4456789999999999998  77999999999


Q ss_pred             eEEEEEeecCCCCcc-eeeecccccccceeeeCCCCCC--------Cccccc-----------c-----CCCCCCccceE
Q psy2762         137 TISFLTYMSDTNSWE-SRKIAAHTIGCNAVSWGPGIGS--------LSELDL-----------K-----GSKLGGVAKRL  191 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~--------~~~~~~-----------~-----~~~~~~~~~~l  191 (318)
                      .|++|+......... ...+.+|..........+....        ......           .     .........++
T Consensus       120 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (340)
T d1tbga_         120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF  199 (340)
T ss_dssp             CEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             eeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccccccee
Confidence            999998754432221 1223344433222221111000        000000           0     00111224579


Q ss_pred             EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      ++|+.|+.|++||+.++++  ..++.+|...|++++|+|+    +.+|++++.|+.|++|+..............+...|
T Consensus       200 ~~~~~d~~v~i~d~~~~~~--~~~~~~h~~~i~~v~~~p~----~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i  273 (340)
T d1tbga_         200 VSGACDASAKLWDVREGMC--RQTFTGHESDINAICFFPN----GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI  273 (340)
T ss_dssp             EEEETTTEEEEEETTTTEE--EEEECCCSSCEEEEEECTT----SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred             EEeecCceEEEEECCCCcE--EEEEeCCCCCeEEEEECCC----CCEEEEEeCCCeEEEEeecccccccccccccccCce
Confidence            9999999999999988764  4567899999999999996    789999999999999999865422111223455679


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEECCCCc
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                      .+++|+|+|++|++|+.||+|+|||...+..
T Consensus       274 ~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~  304 (340)
T d1tbga_         274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADR  304 (340)
T ss_dssp             EEEEECSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred             EEEEECCCCCEEEEEECCCEEEEEECCCCcE
Confidence            9999999999999999999999999776543

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.5e-31  Score=226.37  Aligned_cols=237  Identities=18%  Similarity=0.181  Sum_probs=176.0

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEe-cCCCcCeEEEEeeCCCCCcEEEEeec
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEY-NNHDSSVNSIAWAPKEFGLILACGSS  134 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~lasgs~  134 (318)
                      |.+.+++.||.+.|++++|++  ++++||||+.||+|++||+.+++...  .+ .+|...|.+++|+|+  +. +++++.
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~--dg~~l~s~s~Dg~v~vWd~~~~~~~~--~~~~~h~~~v~~v~~~~~--g~-~~~~~~   74 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSA--DGKTLFSADAEGHINSWDISTGISNR--VFPDVHATMITGIKTTSK--GD-LFTVSW   74 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEE--CSSCSCSSCEEEEEECTT--SC-EEEEET
T ss_pred             CccceEcCCCCCCcEEEEECC--CCCEEEEEcCCCeEEEEECCCCcEEE--EEcCCCCCcEEEEEeecc--ce-eecccc
Confidence            467889999999999999974  58999999999999999998876433  33 468999999999998  54 456677


Q ss_pred             CCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcc--------cc--------ccCC----CCCCccceEEEe
Q psy2762         135 DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSE--------LD--------LKGS----KLGGVAKRLVSG  194 (318)
Q Consensus       135 d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~--------~~--------~~~~----~~~~~~~~lasg  194 (318)
                      |+.+++|+...............+...+..++|+|+......        .+        ....    .+...+++|++|
T Consensus        75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g  154 (299)
T d1nr0a2          75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVG  154 (299)
T ss_dssp             TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred             eeeEEEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999986432211111122245566778888886432110        00        0000    112235689999


Q ss_pred             cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-eeEEeeecCCcEEE
Q psy2762         195 GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TPFIMNTFDDVVWN  273 (318)
Q Consensus       195 s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~~~~~~~~~~v~~  273 (318)
                      +.|+.|++||+++++... .....|...|++++|+|+    +.+|++++.|+.|++|+....... ....+..|..+|.+
T Consensus       155 ~~dg~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~~~----~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~  229 (299)
T d1nr0a2         155 GQDSKVHVYKLSGASVSE-VKTIVHPAEITSVAFSNN----GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVAC  229 (299)
T ss_dssp             ETTSEEEEEEEETTEEEE-EEEEECSSCEEEEEECTT----SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEE
T ss_pred             cccccccccccccccccc-cccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccc
Confidence            999999999998876433 334578999999999996    789999999999999998764321 11234467889999


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         274 VSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       274 v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      ++|+|+|++|++++.|++|+|||++......
T Consensus       230 l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~  260 (299)
T d1nr0a2         230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHP  260 (299)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTCTTSCC
T ss_pred             ccccccccceEEEcCCCEEEEEECCCCCcce
Confidence            9999999999999999999999987755433

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=8.1e-29  Score=216.54  Aligned_cols=242  Identities=17%  Similarity=0.204  Sum_probs=168.3

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc--cccCeEEEEecCC--------
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--HSGPVWQVAWAHP--------   77 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~~~--------   77 (318)
                      .+.||++.|++++|+|+ .+|+||+.|++|++|+....           ........  +...+....+.+.        
T Consensus        48 ~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (355)
T d1nexb2          48 QLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKG-----------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS  115 (355)
T ss_dssp             EEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTT-----------EEEEEECCCSSCEEEEEEEEETTEEEEEEEE
T ss_pred             EEECCCCCEEEEEEcCC-CEEEEEeccccccccccccc-----------ccccccccccccccccccccccccceeeeec
Confidence            44689999999999985 58999999999999998632           11111111  1111111221110        


Q ss_pred             -----------------------------------------------------CCCcEEEEEECCCeEEEEeCCCCcEEE
Q psy2762          78 -----------------------------------------------------QFGTLLASCSYDRKVIIWRGDNGNWFK  104 (318)
Q Consensus        78 -----------------------------------------------------~~~~~las~s~Dg~v~vWd~~~~~~~~  104 (318)
                                                                           .++++++++..|+.|++||+.+++.  
T Consensus       116 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--  193 (355)
T d1nexb2         116 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC--  193 (355)
T ss_dssp             TTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE--
T ss_pred             CCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccc--
Confidence                                                                 1244555555566666666554432  


Q ss_pred             EEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCC
Q psy2762         105 YYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKL  184 (318)
Q Consensus       105 ~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~  184 (318)
                      .....++...+.++.|+|+  +.++++++.|+.|++|+.....   ....+.+|..+|..++|+|               
T Consensus       194 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~~~---------------  253 (355)
T d1nexb2         194 LYILSGHTDRIYSTIYDHE--RKRCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLSD---------------  253 (355)
T ss_dssp             EEEECCCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTCC---EEEEECCCSSCCCEEEECS---------------
T ss_pred             eeeeecccccccccccccc--ceeeecccccceEEeeeccccc---ccccccccccccccccccc---------------
Confidence            2334567788899999998  6789999999999999975432   3456678999999999986               


Q ss_pred             CCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEE-ccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEE
Q psy2762         185 GGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW-APSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFI  263 (318)
Q Consensus       185 ~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~-sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~  263 (318)
                          ++|++|+.||+|++||+.+...    .+..|...+.++.+ +|+    +.+|+++ .|++|+|||+++.... ...
T Consensus       254 ----~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~----~~~l~~g-~d~~i~vwd~~tg~~~-~~~  319 (355)
T d1nexb2         254 ----KFLVSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVS----DNILVSG-SENQFNIYNLRSGKLV-HAN  319 (355)
T ss_dssp             ----SEEEEECTTSEEEEEETTTCCE----EEEEECTTCCCCCEEEEC----SSEEEEE-ETTEEEEEETTTCCBC-CSC
T ss_pred             ----ceeeeeecccccccccccccce----ecccccCCceEEEEEcCC----CCEEEEE-eCCEEEEEECCCCCEE-EEE
Confidence                4799999999999999887642    23456666766654 553    5566555 5899999999875421 123


Q ss_pred             eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         264 MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       264 ~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +.+|.+.|++|+|+|+ .+|++++.||++.||..+
T Consensus       320 ~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~d  353 (355)
T d1nexb2         320 ILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEILD  353 (355)
T ss_dssp             TTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEEE
T ss_pred             ecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEEe
Confidence            4567889999999987 478889999998887643

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=8.4e-29  Score=212.78  Aligned_cols=204  Identities=25%  Similarity=0.406  Sum_probs=176.1

Q ss_pred             ecCCCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762           8 VDTGHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus         8 ~~~gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ...+|...+.++.|+|+++++++++.|+.+++||+.           .+..+.++.+|...+.+++|++  ++.+|++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~  162 (317)
T d1vyhc1          96 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ-----------TGYCVKTFTGHREWVRMVRPNQ--DGTLIASCS  162 (317)
T ss_dssp             CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----------TCCEEEEEECCSSCEEEEEECT--TSSEEEEEE
T ss_pred             ccccccccceeeeccCCCceEEeeccCcceeEeecc-----------cceeeeEEccCCCcceeeeccc--CCCEEEEEe
Confidence            456899999999999999999999999999999986           3467888999999999999963  589999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCC------------------CcEEEEeecCCeEEEEEeecCCCC
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEF------------------GLILACGSSDGTISFLTYMSDTNS  149 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~------------------~~~lasgs~d~~i~i~~~~~~~~~  149 (318)
                      .|+.|++|++.+...  ...+.+|...+.+++|+|+..                  +.++++++.|+.|++|+.....  
T Consensus       163 ~d~~v~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--  238 (317)
T d1vyhc1         163 NDQTVRVWVVATKEC--KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--  238 (317)
T ss_dssp             TTSCEEEEETTTCCE--EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--
T ss_pred             CCCeEEEEeecccee--eEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCc--
Confidence            999999999988763  445678999999999998642                  2478899999999999974432  


Q ss_pred             cceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEc
Q psy2762         150 WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWA  229 (318)
Q Consensus       150 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~s  229 (318)
                       .+..+.+|..++..+.|+|+                 +.+|++|+.||.|+|||+.++++  ..++.+|...|++++|+
T Consensus       239 -~~~~~~~~~~~v~~~~~~~~-----------------~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~h~~~V~~~~~s  298 (317)
T d1vyhc1         239 -CLMTLVGHDNWVRGVLFHSG-----------------GKFILSCADDKTLRVWDYKNKRC--MKTLNAHEHFVTSLDFH  298 (317)
T ss_dssp             -EEEEEECCSSCEEEEEECSS-----------------SSCEEEEETTTEEEEECCTTSCC--CEEEECCSSCEEEEEEC
T ss_pred             -EEEEEeCCCCCEEEEEECCC-----------------CCEEEEEECCCeEEEEECCCCcE--EEEEcCCCCCEEEEEEc
Confidence             34566789999999999997                 46899999999999999988764  45678999999999999


Q ss_pred             cCCCCCccEEEEEeCCCeEEEEE
Q psy2762         230 PSWGLSKCMIASCSQDRKVIIWT  252 (318)
Q Consensus       230 p~~~~~~~~l~s~s~D~~i~vw~  252 (318)
                      |+    +.+|+|||.|++|+|||
T Consensus       299 ~~----~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         299 KT----APYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SS----SSCEEEEETTSEEEEEC
T ss_pred             CC----CCEEEEEeCCCeEEEeC
Confidence            96    78899999999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=5.9e-28  Score=217.40  Aligned_cols=244  Identities=16%  Similarity=0.242  Sum_probs=164.7

Q ss_pred             CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEE--EEecccccCeEEEEecCCC---CCcEEEEEECCCeEEEEeCC
Q psy2762          24 LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLI--AELKGHSGPVWQVAWAHPQ---FGTLLASCSYDRKVIIWRGD   98 (318)
Q Consensus        24 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~--~~~~~h~~~V~~v~~~~~~---~~~~las~s~Dg~v~vWd~~   98 (318)
                      ++.++++++.||+|++|++.........   .....  .....+...++.++|....   .+.+|++++.||++++|++.
T Consensus        78 ~~~~~~s~~~dg~v~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~  154 (393)
T d1sq9a_          78 ELCLVATTSFSGDLLFYRITREDETKKV---IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH  154 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEEECTTTCCE---EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred             CCcEEEEEeCCCcEEEEEccCCCceeee---eccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEee
Confidence            3467889999999999997532110000   00001  1123466778888876421   25789999999999999974


Q ss_pred             CC------------cEE----EEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcc---eeeecccc
Q psy2762          99 NG------------NWF----KYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWE---SRKIAAHT  159 (318)
Q Consensus        99 ~~------------~~~----~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~---~~~~~~h~  159 (318)
                      ..            ...    .......+...+++++|+|+  + ++|+|+.|++|++||+........   ...+.+|.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d--g-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~  231 (393)
T d1sq9a_         155 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS  231 (393)
T ss_dssp             SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred             cCCcccceeeeeeccceecccceecccCCCCcEEEEEECCC--C-EEEEEeCCCcEEEEeeccccccccccccccccccc
Confidence            21            111    11112235567899999997  4 789999999999999754331111   12345799


Q ss_pred             cccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCe---EEEEEccCCeEEEEE-----------EcccCCCCeeE
Q psy2762         160 IGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNL---IKIWKQEGDKWIEET-----------KLENHSDWVRD  225 (318)
Q Consensus       160 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~---i~iwd~~~~~~~~~~-----------~~~~h~~~V~~  225 (318)
                      .+|++++|+|+                 +.+|++|+.|++   |+|||++++++....           .+.+|...|++
T Consensus       232 ~~V~~l~~spd-----------------g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~  294 (393)
T d1sq9a_         232 NSIRSVKFSPQ-----------------GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS  294 (393)
T ss_dssp             CCEEEEEECSS-----------------TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEE
T ss_pred             ceEEEcccccc-----------------cceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceee
Confidence            99999999997                 578999999974   999999877543322           23589999999


Q ss_pred             EEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCc---------------------EEEEEEcCCC----
Q psy2762         226 VAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDV---------------------VWNVSWSLTG----  280 (318)
Q Consensus       226 v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~---------------------v~~v~~spdg----  280 (318)
                      |+|+|+    +.+|+|+|.|++|+|||+++..  ....+.+|.+.                     ++.+.|.|.+    
T Consensus       295 l~fspd----~~~l~S~s~D~~v~vWd~~~g~--~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (393)
T d1sq9a_         295 LSFNDS----GETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG  368 (393)
T ss_dssp             EEECSS----SSEEEEEETTSEEEEEETTTTE--EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred             eccCCC----CCeeEEECCCCEEEEEECCCCC--EEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCceec
Confidence            999996    8899999999999999998754  23445555433                     5555555432    


Q ss_pred             ------CEEEEEeCCCeEEEEE
Q psy2762         281 ------DILTVSCGDNSVSLWK  296 (318)
Q Consensus       281 ------~~l~s~~~D~~v~iW~  296 (318)
                            +.|++++.|+.+|+|+
T Consensus       369 ~~~~~~~~~~~~~~d~~ir~~~  390 (393)
T d1sq9a_         369 MGADLNESLCCVCLDRSIRWFR  390 (393)
T ss_dssp             TTCTTSCEEEEEETTTEEEEEE
T ss_pred             cccCCCCEEEEEEcCCeEEEEe
Confidence                  3356666666666665

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=2.1e-27  Score=209.04  Aligned_cols=251  Identities=7%  Similarity=-0.004  Sum_probs=181.0

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeCCC--cEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSSDH--TVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~D~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      .+|...|++++|+|||++|++++.|.  .|++||++.           + .+..+..|.+.|.+++|++  ++++|++++
T Consensus        39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~-----------~-~~~~~~~~~~~v~~~~~sp--dg~~l~~~~  104 (360)
T d1k32a3          39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-----------G-KAEKFEENLGNVFAMGVDR--NGKFAVVAN  104 (360)
T ss_dssp             CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-----------C-CEEECCCCCCSEEEEEECT--TSSEEEEEE
T ss_pred             ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC-----------C-cEEEeeCCCceEEeeeecc--cccccceec
Confidence            47999999999999999999877664  799999863           2 3567789999999999974  599999999


Q ss_pred             CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee----------cCCeEEEEEeecCCCCcceeeecc
Q psy2762          88 YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS----------SDGTISFLTYMSDTNSWESRKIAA  157 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs----------~d~~i~i~~~~~~~~~~~~~~~~~  157 (318)
                      .|+.+++|+..+++...  .+..|...+.+++|+|+  +.+++.+.          .++.+.+|+....    +...+..
T Consensus       105 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~spd--g~~la~~~~~~~~~~~~~~~~~~~v~d~~~~----~~~~~~~  176 (360)
T d1k32a3         105 DRFEIMTVDLETGKPTV--IERSREAMITDFTISDN--SRFIAYGFPLKHGETDGYVMQAIHVYDMEGR----KIFAATT  176 (360)
T ss_dssp             TTSEEEEEETTTCCEEE--EEECSSSCCCCEEECTT--SCEEEEEEEECSSTTCSCCEEEEEEEETTTT----EEEECSC
T ss_pred             cccccccccccccceee--eeecccccccchhhccc--eeeeeeeccccccceeeccccceeeeccccC----ceeeecc
Confidence            99999999998876444  34568888999999999  66776443          3446788886332    2344455


Q ss_pred             cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE-----EEEEcccCCC-----------
Q psy2762         158 HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI-----EETKLENHSD-----------  221 (318)
Q Consensus       158 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~-----~~~~~~~h~~-----------  221 (318)
                      |...+..+.|+|+                 +++|++++.|+.+++|+.......     ....+..|..           
T Consensus       177 ~~~~~~~~~~spd-----------------g~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  239 (360)
T d1k32a3         177 ENSHDYAPAFDAD-----------------SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRS  239 (360)
T ss_dssp             SSSBEEEEEECTT-----------------SCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGG
T ss_pred             cccccccccccCC-----------------CCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCc
Confidence            6667788899997                 578999999999999975432110     0000111111           


Q ss_pred             -----------------------------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         222 -----------------------------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       222 -----------------------------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                                                         .+..+.+.+. +....++++++.|+.|++||+.+..      ...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~d~~~~~------~~~  312 (360)
T d1k32a3         240 MTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH-GEFAAYYQGAPEKGVLLKYDVKTRK------VTE  312 (360)
T ss_dssp             GSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCC-CSHHHHHHCCCCCEEEEEEETTTCC------EEE
T ss_pred             CcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEec-CCCeeEEEecCCCCEEEEEECCCCe------EEE
Confidence                                               1111222211 1123356777788999999987743      123


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECCCCceEEE
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      +.+.|.+++|||||++|++++.||+|++|+++.+..-+++
T Consensus       313 ~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~  352 (360)
T d1k32a3         313 VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV  352 (360)
T ss_dssp             EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEEC
T ss_pred             ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence            4456899999999999999999999999999887665544

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=5.2e-25  Score=188.65  Aligned_cols=225  Identities=15%  Similarity=0.169  Sum_probs=151.1

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      .+++++++||.++|++++|+ |     |+||+.||+|++||+.++       ..+|...|.++++++.   ..+++++.|
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s-~-----l~sgs~Dg~v~~Wd~~~~-------~~~h~~~V~~~~~~~~---~~~~s~s~D   66 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVN-P-----LISGSYDGRIMEWSSSSM-------HQDHSNLIVSLDNSKA---QEYSSISWD   66 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETT-T-----TEEEETTSCEEETTTTEE-------ECCCCSCEEEEECCST---TCCEEEETT
T ss_pred             cceeEEECCCCCceEEEEEC-c-----EEEEeCCCeEEEEECCCC-------CCCCCCCEEEEEecCC---CeEEEEeec
Confidence            46889999999999999995 2     899999999999997642       3579999999999975   347889999


Q ss_pred             CeEEEEEeecCCCCcceeeecccccccceeeeCCC--------CC-CCccccccCC--CCCCccceEEEecCC-CeEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPG--------IG-SLSELDLKGS--KLGGVAKRLVSGGCD-NLIKIW  203 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--------~~-~~~~~~~~~~--~~~~~~~~lasgs~d-~~i~iw  203 (318)
                      ++|++|+............+..+......+..+.+        .+ ....+.....  .....+..+++++.| +.|++|
T Consensus        67 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~  146 (287)
T d1pgua2          67 DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVF  146 (287)
T ss_dssp             TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEE
T ss_pred             cccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeee
Confidence            99999976432211111111111111111111111        00 0000000000  001112456666665 579999


Q ss_pred             EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCC----
Q psy2762         204 KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLT----  279 (318)
Q Consensus       204 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spd----  279 (318)
                      ++...+.. ......|...|++++|+|+    +.+|++++.|+.|++||..+... .......|.++|.+++|+|+    
T Consensus       147 ~~~~~~~~-~~~~~~~~~~v~~~~~s~~----~~~l~~g~~dg~i~i~d~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~  220 (287)
T d1pgua2         147 KLSDLEVS-FDLKTPLRAKPSYISISPS----ETYIAAGDVMGKILLYDLQSREV-KTSRWAFRTSKINAISWKPAEKGA  220 (287)
T ss_dssp             ETTEEEEE-EECSSCCSSCEEEEEECTT----SSEEEEEETTSCEEEEETTTTEE-EECCSCCCSSCEEEEEECCCC---
T ss_pred             ecccccee-eeeeeccCCceeEEEeccC----ccccccccccccccceeeccccc-ccccccccccccceeeeccccccc
Confidence            98654322 2223457888999999996    88999999999999999977531 11224568899999999875    


Q ss_pred             ------CCEEEEEeCCCeEEEEEECCCCc
Q psy2762         280 ------GDILTVSCGDNSVSLWKENTDGA  302 (318)
Q Consensus       280 ------g~~l~s~~~D~~v~iW~~~~~~~  302 (318)
                            +++|++|+.|++|+||+++.+++
T Consensus       221 ~~~~~~~~~l~sgs~D~~i~iw~~~~~~~  249 (287)
T d1pgua2         221 NEEEIEEDLVATGSLDTNIFIYSVKRPMK  249 (287)
T ss_dssp             ---CCSCCEEEEEETTSCEEEEESSCTTC
T ss_pred             ccccCCCCeeEeecCCCeEEEEECCCCCe
Confidence                  46899999999999999876543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=6.4e-25  Score=189.98  Aligned_cols=250  Identities=10%  Similarity=0.040  Sum_probs=168.8

Q ss_pred             CCCcceeeeeeecCC-CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCe-EEEEecCCCCCcEEEEEE
Q psy2762          10 TGHEDMIHDAEMDYL-GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPV-WQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~-g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V-~~v~~~~~~~~~~las~s   87 (318)
                      .+|...|++++|+|+ +.+|++|+.|++|++|++...           ........+...+ ....+.  .+...+++++
T Consensus        53 ~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~-----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  119 (342)
T d1yfqa_          53 LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS-----------PSFQALTNNEANLGICRICK--YGDDKLIAAS  119 (342)
T ss_dssp             EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS-----------SSEEECBSCCCCSCEEEEEE--ETTTEEEEEE
T ss_pred             cCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccc-----------cccccccccccccccccccc--cccccccccc
Confidence            379999999999986 568999999999999998632           2223333333333 333332  2478999999


Q ss_pred             CCCeEEEEeCCCCc--EEEEEEecCC--CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccc
Q psy2762          88 YDRKVIIWRGDNGN--WFKYYEYNNH--DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCN  163 (318)
Q Consensus        88 ~Dg~v~vWd~~~~~--~~~~~~~~~h--~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~  163 (318)
                      .|+++++||+....  .........+  ........+.+.  ...+++++.|+.|++|++..............+.....
T Consensus       120 ~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~  197 (342)
T d1yfqa_         120 WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN--SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIR  197 (342)
T ss_dssp             TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC--SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEE
T ss_pred             cccccceeeccccccceeeecccccccccceeeeeeeecc--CCceeeecCCCcEEEEecccCcccceeeeeccccccee
Confidence            99999999975432  1222222222  223445566665  56789999999999999855443222222223333344


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeE-------EE------EEEcccCCCCeeEEEEcc
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKW-------IE------ETKLENHSDWVRDVAWAP  230 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~-------~~------~~~~~~h~~~V~~v~~sp  230 (318)
                      ...+.|..                +..+++++.||.+.+|+......       ..      .....+|...|++|+|+|
T Consensus       198 ~~~~~~~~----------------~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp  261 (342)
T d1yfqa_         198 DVALLPKE----------------QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP  261 (342)
T ss_dssp             EEEECSGG----------------GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred             eeEeecCC----------------CCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecC
Confidence            44444431                45799999999999998654310       00      111246777899999999


Q ss_pred             CCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEE
Q psy2762         231 SWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKE  297 (318)
Q Consensus       231 ~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~  297 (318)
                      +    +.+|+|||.||+|+|||+.+..  ....+..+ ..+..++|+|+|+.|++++.|+++++|..
T Consensus       262 ~----~~~lasg~~Dg~v~vWD~~~~~--~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~  321 (342)
T d1yfqa_         262 R----HKFLYTAGSDGIISCWNLQTRK--KIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             T----TCCEEEEETTSCEEEEETTTTE--EEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred             C----ccEEEEECCCCEEEEEECCCCc--EEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence            6    7789999999999999998753  22223222 34556889999999999999999999874

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.9e-24  Score=184.28  Aligned_cols=191  Identities=18%  Similarity=0.309  Sum_probs=150.5

Q ss_pred             ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC
Q psy2762          21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG  100 (318)
Q Consensus        21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~  100 (318)
                      +.+...++++++.|++|++||..           ....+..+.+|...+..+.+    ++.+|++++.||+|++||+...
T Consensus       143 ~~~~~~~~~~~~~d~~i~~~d~~-----------~~~~~~~~~~~~~~~~~~~~----~~~~l~s~~~dg~i~~~d~~~~  207 (342)
T d2ovrb2         143 VQYDGRRVVSGAYDFMVKVWDPE-----------TETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVETG  207 (342)
T ss_dssp             EEECSSCEEEEETTSCEEEEEGG-----------GTEEEEEECCCSSCEEEEEE----CSSEEEEEETTSCEEEEETTTC
T ss_pred             eccccceeeeecCCCeEEEeecc-----------cceeeEEEcCcccccccccC----CCCEEEEEeCCCeEEEeecccc
Confidence            44566788899999999999986           34678889999998888876    3789999999999999999887


Q ss_pred             cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCcccccc
Q psy2762         101 NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK  180 (318)
Q Consensus       101 ~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~  180 (318)
                      +.  ...+.+|...+.+++++++    ++++++.|+.|++|+...............|...+..+.++|           
T Consensus       208 ~~--~~~~~~~~~~v~~~~~~~~----~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  270 (342)
T d2ovrb2         208 NC--IHTLTGHQSLTSGMELKDN----ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-----------  270 (342)
T ss_dssp             CE--EEEECCCCSCEEEEEEETT----EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-----------
T ss_pred             ee--eeEecccccceeEEecCCC----EEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC-----------
Confidence            64  4456789999999988864    799999999999999754332111111224556667777765           


Q ss_pred             CCCCCCccceEEEecCCCeEEEEEccCCeEEEEEE---cccCCCCeeEEEEccCCCCCccEEEEEeCCCe----EEEEEc
Q psy2762         181 GSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETK---LENHSDWVRDVAWAPSWGLSKCMIASCSQDRK----VIIWTS  253 (318)
Q Consensus       181 ~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~----i~vw~~  253 (318)
                              .++++|+.||+|+|||+++++++....   ..+|...|++|+|+|+    +.+|++|+.||+    |++||+
T Consensus       271 --------~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~----~~~la~g~~dGt~~~~l~~~Df  338 (342)
T d2ovrb2         271 --------NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT----KLVCAVGSRNGTEETKLLVLDF  338 (342)
T ss_dssp             --------SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSS----EEEEEEECSSSSSCCEEEEEEC
T ss_pred             --------CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCC----CCEEEEEeCCCCCeeEEEEEeC
Confidence                    479999999999999999887544332   2568889999999996    889999999986    999998


Q ss_pred             CC
Q psy2762         254 ND  255 (318)
Q Consensus       254 ~~  255 (318)
                      ..
T Consensus       339 ~~  340 (342)
T d2ovrb2         339 DV  340 (342)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.4e-23  Score=176.51  Aligned_cols=216  Identities=16%  Similarity=0.239  Sum_probs=149.2

Q ss_pred             EEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeE
Q psy2762          59 IAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTI  138 (318)
Q Consensus        59 ~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i  138 (318)
                      +.....|...|+|++|    ++++||||+.||+|+|||+.+++.  ...+.+|...|.+++|++    .+|++|+.|+.|
T Consensus         8 i~~~~~~~~~V~c~~~----d~~~l~sgs~Dg~i~vWd~~~~~~--~~~l~~H~~~V~~v~~~~----~~l~s~s~D~~i   77 (293)
T d1p22a2           8 IHCRSETSKGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLEC--KRILTGHTGSVLCLQYDE----RVIITGSSDSTV   77 (293)
T ss_dssp             EECCCSSCCCEEEEEC----CSSEEEEEESSSCEEEEESSSCCE--EEEECCCSSCEEEEECCS----SEEEEEETTSCE
T ss_pred             EeccCCCCCCEEEEEE----cCCEEEEEeCCCeEEEEECCCCcE--EEEEecCCCCEeeeeccc----ceeecccccccc
Confidence            5566788999999876    378999999999999999998874  446779999999998854    489999999999


Q ss_pred             EEEEeecCCCCcceeeecccccccceeeeC-------CCCCCCccccc------------cCCC-----CCCccceEEEe
Q psy2762         139 SFLTYMSDTNSWESRKIAAHTIGCNAVSWG-------PGIGSLSELDL------------KGSK-----LGGVAKRLVSG  194 (318)
Q Consensus       139 ~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~-------p~~~~~~~~~~------------~~~~-----~~~~~~~lasg  194 (318)
                      ++|+......   ......+..........       ...+.....+.            ....     .......++++
T Consensus        78 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  154 (293)
T d1p22a2          78 RVWDVNTGEM---LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA  154 (293)
T ss_dssp             EEEESSSCCE---EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEE
T ss_pred             cccccccccc---cccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccc
Confidence            9999754431   11111111000000000       00000000000            0000     00112468899


Q ss_pred             cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEE
Q psy2762         195 GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNV  274 (318)
Q Consensus       195 s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v  274 (318)
                      +.|+.|++||..++++  ...+.+|...|..+.+++      .+|++++.|++|++||+....  .......+...|.. 
T Consensus       155 s~d~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~-  223 (293)
T d1p22a2         155 SGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRC-  223 (293)
T ss_dssp             ETTSEEEEEETTTCCE--EEEEECCSSCEEEEEEET------TEEEEEETTSCEEEEETTTCC--EEEEECCCSSCEEE-
T ss_pred             cCCCceeeecCCCCcE--EEEEcccccccccccCCC------CeEEEecCCCEEEEEecccce--eeeeecccceeeee-
Confidence            9999999999988764  455678988899888865      479999999999999998754  23344556667754 


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         275 SWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       275 ~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                       +++++++|++++.||.|+|||+..
T Consensus       224 -~~~~~~~l~sg~~dg~i~iwd~~~  247 (293)
T d1p22a2         224 -IRFDNKRIVSGAYDGKIKVWDLVA  247 (293)
T ss_dssp             -EECCSSEEEEEETTSCEEEEEHHH
T ss_pred             -ccccceEEEEEcCCCEEEEEECCC
Confidence             667889999999999999999643

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=2.9e-22  Score=181.89  Aligned_cols=275  Identities=11%  Similarity=0.056  Sum_probs=171.4

Q ss_pred             ceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE---EEEecccccCeEEEEecCCCCCcEE-EEEECC
Q psy2762          14 DMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL---IAELKGHSGPVWQVAWAHPQFGTLL-ASCSYD   89 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~D   89 (318)
                      ..++.++|+|||++|++++.|++|++||++..         ....   +....+|.+.+.++.|++  ||++| +++..+
T Consensus        62 ~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~---------~~~~~~~i~~~~~~~~~~~s~~~sp--DG~~l~v~~~~~  130 (426)
T d1hzua2          62 YAVHISRMSASGRYLLVIGRDARIDMIDLWAK---------EPTKVAEIKIGIEARSVESSKFKGY--EDRYTIAGAYWP  130 (426)
T ss_dssp             SSEEEEEECTTSCEEEEEETTSEEEEEETTSS---------SCEEEEEEECCSEEEEEEECCSTTC--TTTEEEEEEEES
T ss_pred             CCeeEEEECCCCCEEEEEeCCCCEEEEEccCC---------ceeEEEEEeCCCCCcceEEeeeecC--CCCEEEEeecCC
Confidence            35899999999999999999999999999732         2222   233457888888888864  58876 555689


Q ss_pred             CeEEEEeCCCCcEEEEEEecCCCcCe-----------EEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccc
Q psy2762          90 RKVIIWRGDNGNWFKYYEYNNHDSSV-----------NSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAH  158 (318)
Q Consensus        90 g~v~vWd~~~~~~~~~~~~~~h~~~v-----------~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h  158 (318)
                      +++++||.........  +..|...+           ..++++++. ..++.+....+.+.+++..... . .......+
T Consensus       131 ~~v~i~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~d~-~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~  205 (426)
T d1hzua2         131 PQFAIMDGETLEPKQI--VSTRGMTVDTQTYHPEPRVAAIIASHEH-PEFIVNVKETGKVLLVNYKDID-N-LTVTSIGA  205 (426)
T ss_dssp             SEEEEEETTTCCEEEE--EECCEECSSSCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEECSSSS-S-CEEEEEEC
T ss_pred             CeEEEEcCCccceeEE--eeccCCCccceeecCCCceeEEEECCCC-CEEEEecCCCCeEEEEEecccc-c-eeeEEecc
Confidence            9999999988765443  33344333           344444442 1122222222333333321111 0 11122245


Q ss_pred             ccccceeeeCCCCCCCcc----------ccccC-----------CCC---------CCc-cceEEEecCCCeEEEEEccC
Q psy2762         159 TIGCNAVSWGPGIGSLSE----------LDLKG-----------SKL---------GGV-AKRLVSGGCDNLIKIWKQEG  207 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~~~~----------~~~~~-----------~~~---------~~~-~~~lasgs~d~~i~iwd~~~  207 (318)
                      ...+..+.|+|+......          .+...           ...         ... ....++.+.|+.+.+|+...
T Consensus       206 ~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~  285 (426)
T d1hzua2         206 APFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP  285 (426)
T ss_dssp             CSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCT
T ss_pred             CCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccc
Confidence            556677888887532211          00000           000         000 11345667789999998654


Q ss_pred             Ce-----EEEEEEcccCCCCeeEEEEccCCCCCccEEE-------EEeCCCeEEEEEcCCCcceeeE-------EeeecC
Q psy2762         208 DK-----WIEETKLENHSDWVRDVAWAPSWGLSKCMIA-------SCSQDRKVIIWTSNDYVTWTPF-------IMNTFD  268 (318)
Q Consensus       208 ~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~-------s~s~D~~i~vw~~~~~~~~~~~-------~~~~~~  268 (318)
                      ..     +.....+++|...+..++|+|+    +.+|+       +++.|++|+|||+.+.......       .+..+.
T Consensus       286 ~~~~~~~~~~~~~l~g~~~~v~~v~~sPd----g~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~  361 (426)
T d1hzua2         286 KNHPQYAWKKVAELQGQGGGSLFIKTHPK----SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA  361 (426)
T ss_dssp             TTCTTTBTSEEEEEECSSSCCCCEECCTT----CSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC
T ss_pred             cccccccceEeEEEecCCCceeEEEcCCC----CceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCC
Confidence            31     1235668899999999999996    77888       5677999999998775421111       122345


Q ss_pred             CcEEEEEEcCCCCEEEEE-----eCCCeEEEEEECCCCceEEEee
Q psy2762         269 DVVWNVSWSLTGDILTVS-----CGDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       269 ~~v~~v~~spdg~~l~s~-----~~D~~v~iW~~~~~~~~~~~~~  308 (318)
                      ..|++++|||||++|+.+     +.|++|+|||..+...|+.+..
T Consensus       362 ~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~  406 (426)
T d1hzua2         362 KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD  406 (426)
T ss_dssp             CCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             ccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECC
Confidence            679999999999977433     3588999999888766665543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.91  E-value=2e-22  Score=176.75  Aligned_cols=191  Identities=8%  Similarity=-0.024  Sum_probs=150.4

Q ss_pred             eeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCC--eEE
Q psy2762          17 HDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDR--KVI   93 (318)
Q Consensus        17 ~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg--~v~   93 (318)
                      ..-.||| ||+++|+++ +|.|.|||++.           +..+. + +|.+.|.+++|++  +|++|++++.|.  .|+
T Consensus         6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~-----------~~~~~-~-~~~~~v~~~~~sp--Dg~~l~~~~~~~g~~v~   69 (360)
T d1k32a3           6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSG-----------TYVLK-V-PEPLRIRYVRRGG--DTKVAFIHGTREGDFLG   69 (360)
T ss_dssp             GEEEEEECGGGCEEEEE-TTEEEEECTTS-----------SBEEE-C-SCCSCEEEEEECS--SSEEEEEEEETTEEEEE
T ss_pred             hcccccCCCCCEEEEEE-CCeEEEEECCC-----------CcEEE-c-cCCCCEEEEEECC--CCCEEEEEEcCCCCEEE
Confidence            4467999 999999987 57999999863           33333 3 6999999999974  589998877664  799


Q ss_pred             EEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          94 IWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        94 vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +||..++..   ..+..|...|.+++|+|+  +.++++++.++.+.+|+.....   ....+..|...+..++|+|+   
T Consensus        70 v~d~~~~~~---~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~spd---  138 (360)
T d1k32a3          70 IYDYRTGKA---EKFEENLGNVFAMGVDRN--GKFAVVANDRFEIMTVDLETGK---PTVIERSREAMITDFTISDN---  138 (360)
T ss_dssp             EEETTTCCE---EECCCCCCSEEEEEECTT--SSEEEEEETTSEEEEEETTTCC---EEEEEECSSSCCCCEEECTT---
T ss_pred             EEECCCCcE---EEeeCCCceEEeeeeccc--ccccceeccccccccccccccc---eeeeeecccccccchhhccc---
Confidence            999988753   245679999999999999  7799999999999999874332   23344567788899999997   


Q ss_pred             CccccccCCCCCCccceEE----------EecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         174 LSELDLKGSKLGGVAKRLV----------SGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~la----------sgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                                    +++||          .+..++.+++||..+++.   ..+..|...+..+.|+|+    |.+|++++
T Consensus       139 --------------g~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~---~~~~~~~~~~~~~~~spd----g~~l~~~s  197 (360)
T d1k32a3         139 --------------SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI---FAATTENSHDYAPAFDAD----SKNLYYLS  197 (360)
T ss_dssp             --------------SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE---EECSCSSSBEEEEEECTT----SCEEEEEE
T ss_pred             --------------eeeeeeeccccccceeeccccceeeeccccCce---eeecccccccccccccCC----CCEEEEEe
Confidence                          34555          345666899999988753   334567778899999996    88999999


Q ss_pred             CCCeEEEEEcCC
Q psy2762         244 QDRKVIIWTSND  255 (318)
Q Consensus       244 ~D~~i~vw~~~~  255 (318)
                      .|+.+++|+...
T Consensus       198 ~~~~~~~~d~~~  209 (360)
T d1k32a3         198 YRSLDPSPDRVV  209 (360)
T ss_dssp             SCCCCCEECSSS
T ss_pred             CCCceEcccccc
Confidence            999999998543

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=1.2e-21  Score=178.42  Aligned_cols=269  Identities=12%  Similarity=0.036  Sum_probs=166.0

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceE---EEEecccccCeEEEEecCCCCCcEE-EEEECCC
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTL---IAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDR   90 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg   90 (318)
                      .++.++|||||++|++++.|++|++||+...         ....   +....+|.+.+.+..|++  ||++| ++++.++
T Consensus        63 ~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~---------~~~~~~~i~~~~~~~~~~~s~~~Sp--DG~~l~vs~~~~~  131 (432)
T d1qksa2          63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMK---------EPTTVAEIKIGSEARSIETSKMEGW--EDKYAIAGAYWPP  131 (432)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSS---------SCCEEEEEECCSEEEEEEECCSTTC--TTTEEEEEEEETT
T ss_pred             CeeEEEECCCCCEEEEEcCCCCEEEEEeeCC---------CceEEEEEecCCCCCCeEEecccCC--CCCEEEEEcCCCC
Confidence            5999999999999999999999999998632         1222   344457778888888864  58875 7888899


Q ss_pred             eEEEEeCCCCcEEEEEEec---------CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccc
Q psy2762          91 KVIIWRGDNGNWFKYYEYN---------NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIG  161 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~---------~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~  161 (318)
                      +|+|||..+++........         .+......|.++|+. ..++++...++.|.+|+...... ..... ..+...
T Consensus       132 ~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~~~~vs~~~~~~i~~~d~~~~~~-~~~~~-i~~g~~  208 (432)
T d1qksa2         132 QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR-PEFIVNVKETGKILLVDYTDLNN-LKTTE-ISAERF  208 (432)
T ss_dssp             EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS-SEEEEEETTTTEEEEEETTCSSE-EEEEE-EECCSS
T ss_pred             eEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCC-CEEEEEEccCCeEEEEEccCCCc-ceEEE-EcccCc
Confidence            9999999988765543321         134456778899984 34566777789999998643221 11111 134445


Q ss_pred             cceeeeCCCCCCCcc----------ccccCC---------C------------CCCccceEEEe-cCCCeEEEEEccCCe
Q psy2762         162 CNAVSWGPGIGSLSE----------LDLKGS---------K------------LGGVAKRLVSG-GCDNLIKIWKQEGDK  209 (318)
Q Consensus       162 v~~~~~~p~~~~~~~----------~~~~~~---------~------------~~~~~~~lasg-s~d~~i~iwd~~~~~  209 (318)
                      ...++|+|+...+..          ++.+..         .            ....+...++. ..|+.|.+|+.....
T Consensus       209 ~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~  288 (432)
T d1qksa2         209 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG  288 (432)
T ss_dssp             EEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred             cccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc
Confidence            678889998532211          111100         0            00101122222 346777777654321


Q ss_pred             EEEEEEcccCCCCeeEEEEccCCC-------------------------------CCccEEEEEeCCCeEEEEEcCCCcc
Q psy2762         210 WIEETKLENHSDWVRDVAWAPSWG-------------------------------LSKCMIASCSQDRKVIIWTSNDYVT  258 (318)
Q Consensus       210 ~~~~~~~~~h~~~V~~v~~sp~~~-------------------------------~~~~~l~s~s~D~~i~vw~~~~~~~  258 (318)
                            ...|...|....++|++.                               .++..|++++.|+++++|+..+.. 
T Consensus       289 ------~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~~-  361 (432)
T d1qksa2         289 ------HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA-  361 (432)
T ss_dssp             ------CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHH-
T ss_pred             ------ccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEeccccccc-
Confidence                  112222333333433200                               025556666667777777654321 


Q ss_pred             eeeEEeeecCCcEEEEEEcCCCCEEEEEe-----CCCeEEEEEECCCCceEEEee
Q psy2762         259 WTPFIMNTFDDVVWNVSWSLTGDILTVSC-----GDNSVSLWKENTDGAWQCITE  308 (318)
Q Consensus       259 ~~~~~~~~~~~~v~~v~~spdg~~l~s~~-----~D~~v~iW~~~~~~~~~~~~~  308 (318)
                          .+..+...|.+++|||||++|+.+.     .|+.|+|||..+...|+.++.
T Consensus       362 ----~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~  412 (432)
T d1qksa2         362 ----GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  412 (432)
T ss_dssp             ----TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             ----ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecC
Confidence                1224566789999999999886654     468999999888777776644

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.89  E-value=7.9e-20  Score=156.11  Aligned_cols=240  Identities=10%  Similarity=0.031  Sum_probs=164.6

Q ss_pred             ceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeE
Q psy2762          14 DMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKV   92 (318)
Q Consensus        14 ~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v   92 (318)
                      ..+..++|+|||++| ++++.+++|++||+.           ++..+.++..|.. +..+.|+++ ....++++..++.+
T Consensus        32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~-----------t~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~   98 (301)
T d1l0qa2          32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTA-----------TNNVIATVPAGSS-PQGVAVSPD-GKQVYVTNMASSTL   98 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEETT-----------TTEEEEEEECSSS-EEEEEECTT-SSEEEEEETTTTEE
T ss_pred             CCceEEEEeCCCCEEEEEECCCCEEEEEECC-----------CCceeeeeecccc-ccccccccc-ccccccccccccee
Confidence            356789999999987 577789999999996           3567788877764 578888743 23455666778899


Q ss_pred             EEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCC
Q psy2762          93 IIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIG  172 (318)
Q Consensus        93 ~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  172 (318)
                      .+|+..+++...  .+. +...+.++.|+|+. ..+++++..++.+.+|+.....    ......+...+..+.++|+. 
T Consensus        99 ~~~~~~~~~~~~--~~~-~~~~~~~~~~~~dg-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-  169 (301)
T d1l0qa2          99 SVIDTTSNTVAG--TVK-TGKSPLGLALSPDG-KKLYVTNNGDKTVSVINTVTKA----VINTVSVGRSPKGIAVTPDG-  169 (301)
T ss_dssp             EEEETTTTEEEE--EEE-CSSSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE----EEEEEECCSSEEEEEECTTS-
T ss_pred             eecccccceeee--ecc-ccccceEEEeecCC-Ceeeeeeccccceeeeeccccc----eeeecccCCCceEEEeeccc-
Confidence            999998875433  333 44567889999984 3456677778888888763322    12222333456678888863 


Q ss_pred             CCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe---CCCeE
Q psy2762         173 SLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS---QDRKV  248 (318)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s---~D~~i  248 (318)
                                      .+++++ ..++.+.+|+....+....  +. +...+..+.|+|+    +..++.++   .+++|
T Consensus       170 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~----g~~~~v~~~~~~~~~v  226 (301)
T d1l0qa2         170 ----------------TKVYVANFDSMSISVIDTVTNSVIDT--VK-VEAAPSGIAVNPE----GTKAYVTNVDKYFNTV  226 (301)
T ss_dssp             ----------------SEEEEEETTTTEEEEEETTTTEEEEE--EE-CSSEEEEEEECTT----SSEEEEEEECSSCCEE
T ss_pred             ----------------cceeeecccccccccccccceeeeec--cc-ccCCcceeecccc----ccccccccccceeeee
Confidence                            344444 4556777888776654322  22 2344678999996    55554443   34689


Q ss_pred             EEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEE-EEEeCCCeEEEEEECCCC
Q psy2762         249 IIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNSVSLWKENTDG  301 (318)
Q Consensus       249 ~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l-~s~~~D~~v~iW~~~~~~  301 (318)
                      ++||..+...  ...+ .+...+..++|+|||++| ++++.|++|++||..++.
T Consensus       227 ~v~D~~t~~~--~~~~-~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~  277 (301)
T d1l0qa2         227 SMIDTGTNKI--TARI-PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT  277 (301)
T ss_dssp             EEEETTTTEE--EEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             eeeecCCCeE--EEEE-cCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence            9999987532  2222 234568999999999987 566779999999988763

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=9.4e-21  Score=171.81  Aligned_cols=260  Identities=10%  Similarity=0.007  Sum_probs=161.6

Q ss_pred             eeecCC--CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEe
Q psy2762          19 AEMDYL--GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWR   96 (318)
Q Consensus        19 ~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd   96 (318)
                      +.++++  +.++++.+.||+|+|||+.           +++++.++..|. .+..++|++  ||++|++++.|++|++||
T Consensus        24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~-----------t~~~~~~l~~g~-~~~~vafSP--DGk~l~~~~~d~~v~vwd   89 (426)
T d1hzua2          24 QLNDLDLPNLFSVTLRDAGQIALVDGD-----------SKKIVKVIDTGY-AVHISRMSA--SGRYLLVIGRDARIDMID   89 (426)
T ss_dssp             CCSCCCGGGEEEEEETTTTEEEEEETT-----------TCSEEEEEECCS-SEEEEEECT--TSCEEEEEETTSEEEEEE
T ss_pred             ccccCCCCeEEEEEEcCCCEEEEEECC-----------CCcEEEEEeCCC-CeeEEEECC--CCCEEEEEeCCCCEEEEE
Confidence            345554  3467889999999999997           467889998875 589999974  699999999999999999


Q ss_pred             CCCCcEEEEEEec---CCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCC
Q psy2762          97 GDNGNWFKYYEYN---NHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGS  173 (318)
Q Consensus        97 ~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  173 (318)
                      +.+++.....++.   +|...+.+++|+||+ ..+++++..++.+++||.....   ....+..|...+....+.++...
T Consensus        90 ~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG-~~l~v~~~~~~~v~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  165 (426)
T d1hzua2          90 LWAKEPTKVAEIKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLE---PKQIVSTRGMTVDTQTYHPEPRV  165 (426)
T ss_dssp             TTSSSCEEEEEEECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCC---EEEEEECCEECSSSCCEESCCCE
T ss_pred             ccCCceeEEEEEeCCCCCcceEEeeeecCCC-CEEEEeecCCCeEEEEcCCccc---eeEEeeccCCCccceeecCCCce
Confidence            9887654444433   355567778888984 2345666789999999864332   23334455555555555443210


Q ss_pred             CccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE-eCCCeEEEEE
Q psy2762         174 LSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC-SQDRKVIIWT  252 (318)
Q Consensus       174 ~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~-s~D~~i~vw~  252 (318)
                      ...   ....  +....+.+....+.+.+++....... ......+...+..+.|+|+    +.++.++ ..+..+.+++
T Consensus       166 ~~i---~~s~--d~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----g~~~~~a~~~~~~~~~~~  235 (426)
T d1hzua2         166 AAI---IASH--EHPEFIVNVKETGKVLLVNYKDIDNL-TVTSIGAAPFLADGGWDSS----HRYFMTAANNSNKVAVID  235 (426)
T ss_dssp             EEE---EECS--SSSEEEEEETTTTEEEEEECSSSSSC-EEEEEECCSSEEEEEECTT----SCEEEEEETTCSEEEEEE
T ss_pred             eEE---EECC--CCCEEEEecCCCCeEEEEEeccccce-eeEEeccCCccEeeeECCC----CcEEEeeeecccceeeee
Confidence            000   0000  00112223333344444443332211 1222356677888999996    4444443 3455566665


Q ss_pred             cCCCcc----------------------------------------------------eeeEEeeecCCcEEEEEEcCCC
Q psy2762         253 SNDYVT----------------------------------------------------WTPFIMNTFDDVVWNVSWSLTG  280 (318)
Q Consensus       253 ~~~~~~----------------------------------------------------~~~~~~~~~~~~v~~v~~spdg  280 (318)
                      ......                                                    .....+.+|...|++++|+|||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg  315 (426)
T d1hzua2         236 SKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS  315 (426)
T ss_dssp             TTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTC
T ss_pred             cccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCC
Confidence            443210                                                    0122345666779999999999


Q ss_pred             CEEE-------EEeCCCeEEEEEECCCCceEEE
Q psy2762         281 DILT-------VSCGDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       281 ~~l~-------s~~~D~~v~iW~~~~~~~~~~~  306 (318)
                      ++|+       +++.|++|+|||+.++....++
T Consensus       316 ~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~  348 (426)
T d1hzua2         316 SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV  348 (426)
T ss_dssp             SEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred             ceEEEeecCCCCcccCCEEEEEECCCCCcCeEE
Confidence            9999       4566899999998776544333

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.86  E-value=1.7e-19  Score=156.12  Aligned_cols=253  Identities=11%  Similarity=0.034  Sum_probs=162.2

Q ss_pred             CEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc--cccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCCCCcE
Q psy2762          26 LYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG--HSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGDNGNW  102 (318)
Q Consensus        26 ~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~~~~~  102 (318)
                      .||++++.|++|+|||+.           +++++.++..  +...+.+++|++  ||++| ++++.|+.|.+||+.+++.
T Consensus         2 ~~~vt~~~d~~v~v~D~~-----------s~~~~~~i~~~~~~~~~~~i~~sp--Dg~~l~v~~~~~~~v~v~D~~t~~~   68 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTE-----------KMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGET   68 (337)
T ss_dssp             EEEEEEETTTEEEEEETT-----------TTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCE
T ss_pred             eEEEEEcCCCEEEEEECC-----------CCeEEEEEECCCCCCCccEEEECC--CCCEEEEEECCCCeEEEEECCCCcE
Confidence            589999999999999997           3567777764  445678999974  58876 5667899999999998875


Q ss_pred             EEEEEecC---CCcCeEEEEeeCCCCCcEEEEeec------------CCeEEEEEeecCCCCcceeeecccccccceeee
Q psy2762         103 FKYYEYNN---HDSSVNSIAWAPKEFGLILACGSS------------DGTISFLTYMSDTNSWESRKIAAHTIGCNAVSW  167 (318)
Q Consensus       103 ~~~~~~~~---h~~~v~~v~~~p~~~~~~lasgs~------------d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (318)
                      +.......   +...+..++|+|+  +..++++..            +..+.+||....    .......+...+..++|
T Consensus        69 ~~~~~~~~~~~~~~~~~~v~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~~~  142 (337)
T d1pbyb_          69 LGRIDLSTPEERVKSLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETL----SRRKAFEAPRQITMLAW  142 (337)
T ss_dssp             EEEEECCBTTEEEECTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTT----EEEEEEECCSSCCCEEE
T ss_pred             EEEEecCCCcccccceeeEEEcCC--CcEEEEeecCCcceeeeccccccceeeccccCC----eEEEeccccCCceEEEE
Confidence            54433221   1234568899998  555655553            345555654221    11222223445667788


Q ss_pred             CCCCCCCcc-------ccccC----------------------CCC---CCcc--------------ceEEEecCCCeEE
Q psy2762         168 GPGIGSLSE-------LDLKG----------------------SKL---GGVA--------------KRLVSGGCDNLIK  201 (318)
Q Consensus       168 ~p~~~~~~~-------~~~~~----------------------~~~---~~~~--------------~~lasgs~d~~i~  201 (318)
                      +|+...+..       ++...                      ...   ....              ..+..++.++.+.
T Consensus       143 s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (337)
T d1pbyb_         143 ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLL  222 (337)
T ss_dssp             CTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEE
T ss_pred             cCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEE
Confidence            886432211       00000                      000   0000              0011233445688


Q ss_pred             EEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCC
Q psy2762         202 IWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGD  281 (318)
Q Consensus       202 iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~  281 (318)
                      +|+...+... ...+..+...+..+.++|+    +.+++.+  |+.|++||+.+...  .. ...+...+.+++|+|||+
T Consensus       223 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~i~v~d~~~~~~--~~-~~~~~~~~~~~~~s~dG~  292 (337)
T d1pbyb_         223 TMDLETGEMA-MREVRIMDVFYFSTAVNPA----KTRAFGA--YNVLESFDLEKNAS--IK-RVPLPHSYYSVNVSTDGS  292 (337)
T ss_dssp             EEETTTCCEE-EEEEEECSSCEEEEEECTT----SSEEEEE--ESEEEEEETTTTEE--EE-EEECSSCCCEEEECTTSC
T ss_pred             EEEcCCCcEE-EEEecCCCcceEEEEeccc----ceEEEEc--cccEEEEECCCCcE--EE-EEcCCCCEEEEEECCCCC
Confidence            8887776542 3344567777888899986    5566544  68999999987542  22 223556788999999999


Q ss_pred             EEEEEeCCCeEEEEEECCCCceEEEe
Q psy2762         282 ILTVSCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       282 ~l~s~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      +|++++.|++|++||..+......+.
T Consensus       293 ~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         293 TVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             EEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            99999999999999988765544443

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.86  E-value=1.6e-19  Score=156.99  Aligned_cols=255  Identities=8%  Similarity=-0.021  Sum_probs=161.1

Q ss_pred             eeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCcEE-EEEECCCeEEEEe
Q psy2762          19 AEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWR   96 (318)
Q Consensus        19 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd   96 (318)
                      ++|+++++||++++.|++|.|||++           +++++.+++ .|...+.++.|++  ||++| ++++.++.|.+||
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~-----------t~~~~~t~~~~~~~~p~~l~~sp--DG~~l~v~~~~~~~v~~~d   68 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVA-----------SDTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGID   68 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETT-----------TTEEEEEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECC-----------CCCEEEEEEcCCCCCcceEEECC--CCCEEEEEECCCCcEEEEe
Confidence            6799999999999999999999997           467888887 4566788999974  57776 5666899999999


Q ss_pred             CCCCcEEEEEEecCC----CcCeEEEEeeCCCCCcEEEEee------------cCCeEEEEEeecCCCCcceeeeccc--
Q psy2762          97 GDNGNWFKYYEYNNH----DSSVNSIAWAPKEFGLILACGS------------SDGTISFLTYMSDTNSWESRKIAAH--  158 (318)
Q Consensus        97 ~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~~lasgs------------~d~~i~i~~~~~~~~~~~~~~~~~h--  158 (318)
                      +.+++..........    ...+..++|+|+  +.++.+++            .+..+.+|+......   ...+..+  
T Consensus        69 ~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~D--G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~  143 (346)
T d1jmxb_          69 LDTCKNTFHANLSSVPGEVGRSMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE---AKPVRTFPM  143 (346)
T ss_dssp             TTTTEEEEEEESCCSTTEEEECSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG---BCCSEEEEC
T ss_pred             CccCeeeeeecccccccccCCceEEEEEecC--CCEEEEEecCCcceeeeeccCcceEEEEeccccee---eeEEEeeec
Confidence            998865444332211    124568899998  55555443            356677776543221   0111111  


Q ss_pred             ccccceeeeCCCCCC------Ccc-----------ccccC-------CC-----------------------CCCccceE
Q psy2762         159 TIGCNAVSWGPGIGS------LSE-----------LDLKG-------SK-----------------------LGGVAKRL  191 (318)
Q Consensus       159 ~~~v~~~~~~p~~~~------~~~-----------~~~~~-------~~-----------------------~~~~~~~l  191 (318)
                      ...+..+.++++...      ...           +....       .+                       .......+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (346)
T d1jmxb_         144 PRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP  223 (346)
T ss_dssp             CSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred             cCceEEEEecCCCEEEEeCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeE
Confidence            111122222221100      000           00000       00                       00001123


Q ss_pred             EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      +++..+..+.+|+..++... ...+..|...+..+.++|+    +.+++... ++.|++||......  ... ..+...+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~v~v~d~~~~~~--~~~-~~~~~~~  294 (346)
T d1jmxb_         224 ATADLLYGYLSVDLKTGKTH-TQEFADLTELYFTGLRSPK----DPNQIYGV-LNRLAKYDLKQRKL--IKA-ANLDHTY  294 (346)
T ss_dssp             CCCEEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECSS----CTTEEEEE-ESEEEEEETTTTEE--EEE-EECSSCC
T ss_pred             eeccCCceEEEEECCCCceE-EEEeecccceeEEEEEeCC----CCEEEEec-CCeEEEEECCCCcE--EEE-EcCCCCE
Confidence            45556667888998876543 3345567788899999986    45566555 45799999877531  122 2344578


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEECCC
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWKENTD  300 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~  300 (318)
                      .+++|||||++|++++.|++|++||..+.
T Consensus       295 ~~va~s~DG~~l~v~~~d~~v~v~D~~t~  323 (346)
T d1jmxb_         295 YCVAFDKKGDKLYLGGTFNDLAVFNPDTL  323 (346)
T ss_dssp             CEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEECccC
Confidence            99999999999999999999999998775

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=5.5e-18  Score=146.72  Aligned_cols=271  Identities=12%  Similarity=0.151  Sum_probs=171.9

Q ss_pred             CCcceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceE-EEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          11 GHEDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTL-IAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      .|.+.|..++|+|||++|+. +..|++|++|+++..         .... ......+...+..++|++  +|++|++++.
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~---------~~~~~~~~~~~~~~~p~~l~~sp--Dg~~l~v~~~  102 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD---------DGALTFAAESALPGSLTHISTDH--QGQFVFVGSY  102 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT---------TCCEEEEEEEECSSCCSEEEECT--TSSEEEEEET
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCC---------CCcEEEeeecccCCCceEEEEcC--CCCEEeeccc
Confidence            57789999999999999855 556899999998632         1111 112223445577899974  5899999886


Q ss_pred             -CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceee--ec-ccccccc
Q psy2762          89 -DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRK--IA-AHTIGCN  163 (318)
Q Consensus        89 -Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~--~~-~h~~~v~  163 (318)
                       ++.|.+|+..............+...+.++.++|+  +.++++++ .+..|.+|+............  .. .......
T Consensus       103 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~  180 (333)
T d1ri6a_         103 NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR  180 (333)
T ss_dssp             TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred             CCCceeeeccccccceecccccCCCccceEEEeeec--ceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCcc
Confidence             67899998876654444445566777889999998  44444444 556788888644332111100  01 1222335


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--eEEEEEEc------ccCCCCeeEEEEccCCCCC
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--KWIEETKL------ENHSDWVRDVAWAPSWGLS  235 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~~~~~~~~------~~h~~~V~~v~~sp~~~~~  235 (318)
                      .++|+++.                ...+.+....+...+|+....  ........      .........+.++|+   .
T Consensus       181 ~i~~~~~~----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---~  241 (333)
T d1ri6a_         181 HMVFHPNE----------------QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD---G  241 (333)
T ss_dssp             EEEECTTS----------------SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT---S
T ss_pred             EEEEeccc----------------eeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecc---c
Confidence            67777753                123455666677888875432  11111111      123345677889997   2


Q ss_pred             ccEEEEEeCCCeEEEEEcCCCccee-eEEeeecCCcEEEEEEcCCCCEEEEEeC-CCeEEEEEECC-CCceEEEeeeccc
Q psy2762         236 KCMIASCSQDRKVIIWTSNDYVTWT-PFIMNTFDDVVWNVSWSLTGDILTVSCG-DNSVSLWKENT-DGAWQCITEMGKT  312 (318)
Q Consensus       236 ~~~l~s~s~D~~i~vw~~~~~~~~~-~~~~~~~~~~v~~v~~spdg~~l~s~~~-D~~v~iW~~~~-~~~~~~~~~~~~~  312 (318)
                      ...++.+..++.+.+|++....... ..........+.+++|+|||++|++++. +++|++|+++. .|+.+.+.++..-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~g  321 (333)
T d1ri6a_         242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG  321 (333)
T ss_dssp             SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred             CceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEEEEeccCC
Confidence            3456666778899999887643221 1112233456778999999999887764 68999998875 5677777666543


Q ss_pred             c
Q psy2762         313 S  313 (318)
Q Consensus       313 ~  313 (318)
                      .
T Consensus       322 ~  322 (333)
T d1ri6a_         322 Q  322 (333)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.80  E-value=2.1e-16  Score=139.29  Aligned_cols=281  Identities=13%  Similarity=0.015  Sum_probs=157.5

Q ss_pred             CCCcceeeeeeecCCCCEEEEe-----eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEE
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATC-----SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLA   84 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~-----s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~la   84 (318)
                      .+|.+++..++++|||++++..     +.++.|.+||.+           +++++.++..+..+  .+.|++  ||++|+
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~-----------tg~~~~~~~~~~~~--~~a~Sp--DG~~l~   81 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAG-----------SGSILGHVNGGFLP--NPVAAH--SGSEFA   81 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECC-----------CCCEEEEEeCCCCc--cEEEcC--CCCEEE
Confidence            4788999999999999998764     234568888875           46778888766654  688974  599998


Q ss_pred             EEEC----------CCeEEEEeCCCCcEEEEEEecCCCcC-------eEEEEeeCCCCCcEEEEeecCCeEEEEEeecCC
Q psy2762          85 SCSY----------DRKVIIWRGDNGNWFKYYEYNNHDSS-------VNSIAWAPKEFGLILACGSSDGTISFLTYMSDT  147 (318)
Q Consensus        85 s~s~----------Dg~v~vWd~~~~~~~~~~~~~~h~~~-------v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~  147 (318)
                      +++.          ++.|.+||..+++.....  ..+...       ...+.|+|+....++.....++.+.+|+.....
T Consensus        82 va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~  159 (373)
T d2madh_          82 LASTSFSRIAKGKRTDYVEVFDPVTFLPIADI--ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS  159 (373)
T ss_pred             EEeecCCcccccccceEEEEEECCCCcEEEEE--ecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe
Confidence            8754          678999999877643322  222221       133556665332233333334455555432211


Q ss_pred             CCcc---eeeec-ccccccceeeeCCCC---------CCCccc-----cccC-C------CCCCccceEEEecCCCeEEE
Q psy2762         148 NSWE---SRKIA-AHTIGCNAVSWGPGI---------GSLSEL-----DLKG-S------KLGGVAKRLVSGGCDNLIKI  202 (318)
Q Consensus       148 ~~~~---~~~~~-~h~~~v~~~~~~p~~---------~~~~~~-----~~~~-~------~~~~~~~~lasgs~d~~i~i  202 (318)
                      ....   ..... ........++.+++.         ......     .... .      .... ...++..+.++.+++
T Consensus       160 ~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~  238 (373)
T d2madh_         160 DDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK-SGRIVWPVYSGKILQ  238 (373)
T ss_pred             EEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECC-CceEEEecCCceEEE
Confidence            0000   00000 000000011111110         000000     0000 0      0001 134566778899999


Q ss_pred             EEccCCeEEEEEEcccCCCCee----------EEEEccCCC------CCccEEEEEeCCCeEEEEEcCCCcceeeEEeee
Q psy2762         203 WKQEGDKWIEETKLENHSDWVR----------DVAWAPSWG------LSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       203 wd~~~~~~~~~~~~~~h~~~V~----------~v~~sp~~~------~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      |+..............+...+.          .+.++|+..      ..+..+++...++.+.+||..+...  .. ...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~--~~-~~~  315 (373)
T d2madh_         239 ADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SS-QIS  315 (373)
T ss_pred             EEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcE--EE-Eec
Confidence            9987765433333333333332          344444321      1234456677788899999877542  12 223


Q ss_pred             cCCcEEEEEEcCCCCE--EEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         267 FDDVVWNVSWSLTGDI--LTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~--l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      +...+..++|+|||+.  +++++.|++|++||+.++.....+...++
T Consensus       316 ~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~  362 (373)
T d2madh_         316 LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS  362 (373)
T ss_pred             CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCC
Confidence            5667899999999984  46788999999999988866555554443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.79  E-value=1.2e-17  Score=151.57  Aligned_cols=240  Identities=12%  Similarity=-0.001  Sum_probs=159.4

Q ss_pred             ecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCC
Q psy2762          21 MDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNG  100 (318)
Q Consensus        21 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~  100 (318)
                      .+++..++++.+.||+|.|||..           +++++.++..|. .+..++|++  ||++|++++.|++|++||+.++
T Consensus        28 ~~~~~~~~v~~~d~g~v~v~D~~-----------t~~v~~~~~~g~-~~~~v~fSp--DG~~l~~~s~dg~v~~~d~~t~   93 (432)
T d1qksa2          28 WDLENLFSVTLRDAGQIALIDGS-----------TYEIKTVLDTGY-AVHISRLSA--SGRYLFVIGRDGKVNMIDLWMK   93 (432)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETT-----------TCCEEEEEECSS-CEEEEEECT--TSCEEEEEETTSEEEEEETTSS
T ss_pred             CCCCcEEEEEEcCCCEEEEEECC-----------CCcEEEEEeCCC-CeeEEEECC--CCCEEEEEcCCCCEEEEEeeCC
Confidence            34454556899999999999986           467888988774 699999984  6999999999999999998876


Q ss_pred             cEEEEEEe---cCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccc-----------ceee
Q psy2762         101 NWFKYYEY---NNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC-----------NAVS  166 (318)
Q Consensus       101 ~~~~~~~~---~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v-----------~~~~  166 (318)
                      +......+   .+|.+.+.+.+|+||+ ..++++++.++.|++||.....   ....+..|...+           ..+.
T Consensus        94 ~~~~~~~i~~~~~~~~~~~s~~~SpDG-~~l~vs~~~~~~v~i~d~~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~  169 (432)
T d1qksa2          94 EPTTVAEIKIGSEARSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLE---PKKIQSTRGMTYDEQEYHPEPRVAAIL  169 (432)
T ss_dssp             SCCEEEEEECCSEEEEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCC---EEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred             CceEEEEEecCCCCCCeEEecccCCCC-CEEEEEcCCCCeEEEEeCcccc---ceeeeccCCccccceeccCCCceeEEE
Confidence            53333222   2355566677788883 2356888999999999975433   122223333333           2344


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-C
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-D  245 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D  245 (318)
                      ++|+.                ...+++.+.++.|.+||..+.+......+ .+...+.++.|+|+    |+++++++. +
T Consensus       170 ~s~dg----------------~~~~vs~~~~~~i~~~d~~~~~~~~~~~i-~~g~~~~~~~~spd----g~~~~va~~~~  228 (432)
T d1qksa2         170 ASHYR----------------PEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGS----HRYFITAANAR  228 (432)
T ss_dssp             ECSSS----------------SEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTT----SCEEEEEEGGG
T ss_pred             ECCCC----------------CEEEEEEccCCeEEEEEccCCCcceEEEE-cccCccccceECCC----CCEEEEecccc
Confidence            45432                24567888899999999877654333333 34566889999997    666655554 5


Q ss_pred             CeEEEEEcCCCcceee-----------------------------------EEe-------eecCCcEEEEEEcCCCCEE
Q psy2762         246 RKVIIWTSNDYVTWTP-----------------------------------FIM-------NTFDDVVWNVSWSLTGDIL  283 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~-----------------------------------~~~-------~~~~~~v~~v~~spdg~~l  283 (318)
                      ..+.+++.........                                   ...       ..+...|....++|++..+
T Consensus       229 ~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~  308 (432)
T d1qksa2         229 NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL  308 (432)
T ss_dssp             TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC
T ss_pred             ceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeE
Confidence            6788888765321000                                   000       0011246667777777777


Q ss_pred             EEEeCCCeEEEEEECC
Q psy2762         284 TVSCGDNSVSLWKENT  299 (318)
Q Consensus       284 ~s~~~D~~v~iW~~~~  299 (318)
                      ++++.|++.++|...+
T Consensus       309 ~~~s~p~~~~lw~~~~  324 (432)
T d1qksa2         309 FIKTHPNSQYLYVDAT  324 (432)
T ss_dssp             CEECCTTCSEEEEECT
T ss_pred             EEEecCCccceeeccc
Confidence            7777777777776543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.78  E-value=9e-16  Score=130.39  Aligned_cols=227  Identities=13%  Similarity=0.079  Sum_probs=157.2

Q ss_pred             EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEE-EEEECCCeEEEEeCCCCcEEEEEE
Q psy2762          29 ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLL-ASCSYDRKVIIWRGDNGNWFKYYE  107 (318)
Q Consensus        29 ~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~l-as~s~Dg~v~vWd~~~~~~~~~~~  107 (318)
                      ++++.|++|.|||++           +++++.++... +.+..++|++  +|++| ++++.+++|++||+.+++...  .
T Consensus         6 V~~~~~~~v~v~D~~-----------t~~~~~~i~~g-~~p~~va~sp--dG~~l~v~~~~~~~i~v~d~~t~~~~~--~   69 (301)
T d1l0qa2           6 IANSESDNISVIDVT-----------SNKVTATIPVG-SNPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA--T   69 (301)
T ss_dssp             EEETTTTEEEEEETT-----------TTEEEEEEECS-SSEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE--E
T ss_pred             EEECCCCEEEEEECC-----------CCeEEEEEECC-CCceEEEEeC--CCCEEEEEECCCCEEEEEECCCCceee--e
Confidence            467889999999986           45778887654 4578899974  58876 577789999999999876444  3


Q ss_pred             ecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCc
Q psy2762         108 YNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGV  187 (318)
Q Consensus       108 ~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~  187 (318)
                      +..+ ..+..++|+++. ..+++++..++.+.+|+.....    ......+......+.|+|+.                
T Consensus        70 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dg----------------  127 (301)
T d1l0qa2          70 VPAG-SSPQGVAVSPDG-KQVYVTNMASSTLSVIDTTSNT----VAGTVKTGKSPLGLALSPDG----------------  127 (301)
T ss_dssp             EECS-SSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTE----EEEEEECSSSEEEEEECTTS----------------
T ss_pred             eecc-cccccccccccc-ccccccccccceeeecccccce----eeeeccccccceEEEeecCC----------------
Confidence            4444 356889999984 4566777778899998863322    22222334455778888873                


Q ss_pred             cceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-CCeEEEEEcCCCcceeeEEeee
Q psy2762         188 AKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       188 ~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      ...++++..++.+++|+..+.......  . +...+..+.++|+    +..+++++. ++.+.+|+.....   ......
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  197 (301)
T d1l0qa2         128 KKLYVTNNGDKTVSVINTVTKAVINTV--S-VGRSPKGIAVTPD----GTKVYVANFDSMSISVIDTVTNS---VIDTVK  197 (301)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEE--E-CCSSEEEEEECTT----SSEEEEEETTTTEEEEEETTTTE---EEEEEE
T ss_pred             Ceeeeeeccccceeeeeccccceeeec--c-cCCCceEEEeecc----ccceeeeccccccccccccccee---eeeccc
Confidence            235677888999999999887654332  2 3344789999996    555555555 4667777765532   222233


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeC---CCeEEEEEECCCCce
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCG---DNSVSLWKENTDGAW  303 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~---D~~v~iW~~~~~~~~  303 (318)
                      ....+..++|+|+|+.++.++.   +++|++||..++...
T Consensus       198 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~  237 (301)
T d1l0qa2         198 VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (301)
T ss_dssp             CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             ccCCcceeeccccccccccccccceeeeeeeeecCCCeEE
Confidence            4456788999999998876643   468999997765433

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.73  E-value=2.2e-16  Score=137.95  Aligned_cols=272  Identities=12%  Similarity=0.008  Sum_probs=161.4

Q ss_pred             eeeeeeecCCCCEEEEe-----eCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE--
Q psy2762          15 MIHDAEMDYLGLYLATC-----SSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS--   87 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~-----s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s--   87 (318)
                      ++.-.+.+|||++++..     ..+.+|.|||..           +++++.++..+..+  .++|++  ||++|+.++  
T Consensus         3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~-----------tg~~~~~~~~g~~~--~~a~Sp--Dg~~l~v~~~~   67 (355)
T d2bbkh_           3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGE-----------AGRVIGMIDGGFLP--NPVVAD--DGSFIAHASTV   67 (355)
T ss_dssp             CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETT-----------TTEEEEEEEECSSC--EEEECT--TSSCEEEEEEE
T ss_pred             CcEeEeeCCCCCEEEEEecccCCCcCeEEEEECC-----------CCcEEEEEECCCCC--ceEEcC--CCCEEEEEeCC
Confidence            34444568999998764     356689999986           46778887665444  689974  588787654  


Q ss_pred             --------CCCeEEEEeCCCCcEEEEEEecC-C----CcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceee
Q psy2762          88 --------YDRKVIIWRGDNGNWFKYYEYNN-H----DSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRK  154 (318)
Q Consensus        88 --------~Dg~v~vWd~~~~~~~~~~~~~~-h----~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~  154 (318)
                              .|+.|++||..+++......... +    ......++|+|+....+++..+.+..+.+|+.....   ....
T Consensus        68 ~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~---~~~~  144 (355)
T d2bbkh_          68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA---FKRM  144 (355)
T ss_dssp             EEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE---EEEE
T ss_pred             CccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCc---EeeE
Confidence                    47899999999887555433221 1    123456899998432233333456778888764332   1111


Q ss_pred             eccc-------ccccceeeeCCCCCCCc----------ccccc-----------CCCCCCccceEEEecCCCeEEEEEcc
Q psy2762         155 IAAH-------TIGCNAVSWGPGIGSLS----------ELDLK-----------GSKLGGVAKRLVSGGCDNLIKIWKQE  206 (318)
Q Consensus       155 ~~~h-------~~~v~~~~~~p~~~~~~----------~~~~~-----------~~~~~~~~~~lasgs~d~~i~iwd~~  206 (318)
                      +..+       ..+...+.++++.....          .....           .......+..++.++.++.+++|++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  224 (355)
T d2bbkh_         145 LDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS  224 (355)
T ss_dssp             EECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECT
T ss_pred             EecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecC
Confidence            1111       11222344555422110          00000           00111223468888999999999988


Q ss_pred             CCeEEEEEEcccCC----------CCeeEEEEccCCCCCccEEEEEeCC----------CeEEEEEcCCCcceeeEEeee
Q psy2762         207 GDKWIEETKLENHS----------DWVRDVAWAPSWGLSKCMIASCSQD----------RKVIIWTSNDYVTWTPFIMNT  266 (318)
Q Consensus       207 ~~~~~~~~~~~~h~----------~~V~~v~~sp~~~~~~~~l~s~s~D----------~~i~vw~~~~~~~~~~~~~~~  266 (318)
                      .+..........+.          .....+.++|+    +..++..+.+          ..|.+||..+...  ...+ .
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d----~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~--~~~~-~  297 (355)
T d2bbkh_         225 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRA----LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKF-E  297 (355)
T ss_dssp             TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETT----TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEE-E
T ss_pred             CCcEEEEeccCCcccceEeeeeeccceEEEEEeCC----CCeEEEEeccCCceeecCCCCeEEEEeCCCCcE--EEEe-c
Confidence            76432222122221          12345778886    4555444433          4699999887542  2222 2


Q ss_pred             cCCcEEEEEEcCCCC--EEEEEeCCCeEEEEEECCCCceEEEeeecc
Q psy2762         267 FDDVVWNVSWSLTGD--ILTVSCGDNSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       267 ~~~~v~~v~~spdg~--~l~s~~~D~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      +...+.+++|+|||+  ++++++.|++|++||..++...+.+...++
T Consensus       298 ~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~  344 (355)
T d2bbkh_         298 MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH  344 (355)
T ss_dssp             EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS
T ss_pred             CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCC
Confidence            334578999999998  356667899999999988766666655443

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.70  E-value=4.9e-15  Score=127.52  Aligned_cols=213  Identities=13%  Similarity=0.111  Sum_probs=131.8

Q ss_pred             CcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccc-----cCeEEEEecCCCCCcEEEE
Q psy2762          12 HEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHS-----GPVWQVAWAHPQFGTLLAS   85 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~-----~~V~~v~~~~~~~~~~las   85 (318)
                      +...+.+++|+|||++| ++++.|+.|.+||+.           +++++..+..+.     ..+..++|++  +++++++
T Consensus        32 ~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~-----------t~~~~~~~~~~~~~~~~~~~~~v~~s~--dg~~l~~   98 (337)
T d1pbyb_          32 AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV-----------TGETLGRIDLSTPEERVKSLFGAALSP--DGKTLAI   98 (337)
T ss_dssp             CTTCCCCEEECTTSSEEEEEETTTTEEEEEETT-----------TCCEEEEEECCBTTEEEECTTCEEECT--TSSEEEE
T ss_pred             CCCCccEEEECCCCCEEEEEECCCCeEEEEECC-----------CCcEEEEEecCCCcccccceeeEEEcC--CCcEEEE
Confidence            44568899999999987 567789999999997           356666666553     3345788864  5888877


Q ss_pred             EE------------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          86 CS------------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        86 ~s------------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                      +.            .+..+.+||..+......  +. +...+.+++|+|+  +.++++++.+  +.+||......   ..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~-~~~~~~~~~~s~d--g~~l~~~~~~--~~~~d~~~~~~---~~  168 (337)
T d1pbyb_          99 YESPVRLELTHFEVQPTRVALYDAETLSRRKA--FE-APRQITMLAWARD--GSKLYGLGRD--LHVMDPEAGTL---VE  168 (337)
T ss_dssp             EEEEEEECSSCEEECCCEEEEEETTTTEEEEE--EE-CCSSCCCEEECTT--SSCEEEESSS--EEEEETTTTEE---EE
T ss_pred             eecCCcceeeeccccccceeeccccCCeEEEe--cc-ccCCceEEEEcCC--CCEEEEEcCC--cceeeeecCcE---EE
Confidence            76            467888999887764333  33 3456788999998  6667776654  56677533210   11


Q ss_pred             eecccccccceeeeCCC------------------------CCCC---------ccccccCC-----------------C
Q psy2762         154 KIAAHTIGCNAVSWGPG------------------------IGSL---------SELDLKGS-----------------K  183 (318)
Q Consensus       154 ~~~~h~~~v~~~~~~p~------------------------~~~~---------~~~~~~~~-----------------~  183 (318)
                      .+..+.. .....+.|+                        ....         ...+....                 .
T Consensus       169 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (337)
T d1pbyb_         169 DKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA  247 (337)
T ss_dssp             EECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred             EeecCCc-cccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEE
Confidence            1111000 000000000                        0000         00000000                 0


Q ss_pred             CCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         184 LGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       184 ~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                      ......+++.  .++.|++||+.+++.....   .+...+.+++|+|+    |.+|++++.|++|+|||.++..
T Consensus       248 ~~~~~~~~~~--~~~~i~v~d~~~~~~~~~~---~~~~~~~~~~~s~d----G~~l~v~~~~~~i~v~D~~t~~  312 (337)
T d1pbyb_         248 VNPAKTRAFG--AYNVLESFDLEKNASIKRV---PLPHSYYSVNVSTD----GSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             ECTTSSEEEE--EESEEEEEETTTTEEEEEE---ECSSCCCEEEECTT----SCEEEEESBSSEEEEEETTTCC
T ss_pred             ecccceEEEE--ccccEEEEECCCCcEEEEE---cCCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCCCc
Confidence            0111233443  3589999999988754433   24556899999996    8899999999999999998743

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.2e-13  Score=117.18  Aligned_cols=246  Identities=13%  Similarity=0.119  Sum_probs=154.1

Q ss_pred             EEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE-CCCeEEEEeCCCCcEEEE
Q psy2762          27 YLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS-YDRKVIIWRGDNGNWFKY  105 (318)
Q Consensus        27 ~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s-~Dg~v~vWd~~~~~~~~~  105 (318)
                      .+++++.|++|+||+++..        ..-+++.+ ..|.+.|..++|++  ||++|+.++ .|+.|++|++........
T Consensus         6 v~v~~~~~~~I~v~~~~~~--------~~l~~~~~-~~~~~~v~~la~sp--DG~~L~v~~~~d~~i~~~~i~~~~~~~~   74 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHE--------GALTLTQV-VDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALT   74 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTT--------SCEEEEEE-EECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEEECCCCCcEEEEEEcCC--------CCeEEEEE-EcCCCCEeEEEEeC--CCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence            4578889999999999732        11133333 35889999999974  588885554 589999999875532221


Q ss_pred             -EEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCC
Q psy2762         106 -YEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSK  183 (318)
Q Consensus       106 -~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~  183 (318)
                       .....+...+..++|+|+  ++++++++ .++.|.+|+...... ........+...+..+.++|+.            
T Consensus        75 ~~~~~~~~~~p~~l~~spD--g~~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~v~~s~d~------------  139 (333)
T d1ri6a_          75 FAAESALPGSLTHISTDHQ--GQFVFVGSYNAGNVSVTRLEDGLP-VGVVDVVEGLDGCHSANISPDN------------  139 (333)
T ss_dssp             EEEEEECSSCCSEEEECTT--SSEEEEEETTTTEEEEEEEETTEE-EEEEEEECCCTTBCCCEECTTS------------
T ss_pred             EeeecccCCCceEEEEcCC--CCEEeecccCCCceeeeccccccc-eecccccCCCccceEEEeeecc------------
Confidence             111234456778999999  56666665 477888887644321 1122223455667788888873            


Q ss_pred             CCCccceEE-EecCCCeEEEEEccCCeEEEE----EEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcc
Q psy2762         184 LGGVAKRLV-SGGCDNLIKIWKQEGDKWIEE----TKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVT  258 (318)
Q Consensus       184 ~~~~~~~la-sgs~d~~i~iwd~~~~~~~~~----~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~  258 (318)
                           ++++ ....+..|++|+.........    ..........+.+.|+++   ....+.+....+...+|+......
T Consensus       140 -----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~  211 (333)
T d1ri6a_         140 -----RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN---EQYAYCVNELNSSVDVWELKDPHG  211 (333)
T ss_dssp             -----SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT---SSEEEEEETTTTEEEEEESSCTTS
T ss_pred             -----eeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEecc---ceeEEeeccccCceEEEeeccccc
Confidence                 3444 444566799998765421111    112234455789999996   233444555677788887654331


Q ss_pred             ee--eEEee------ecCCcEEEEEEcCCCCEEEEEe-CCCeEEEEEECCCCceEEE
Q psy2762         259 WT--PFIMN------TFDDVVWNVSWSLTGDILTVSC-GDNSVSLWKENTDGAWQCI  306 (318)
Q Consensus       259 ~~--~~~~~------~~~~~v~~v~~spdg~~l~s~~-~D~~v~iW~~~~~~~~~~~  306 (318)
                      ..  .....      ........++++||++++..+. .++++++|+.+..+.....
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (333)
T d1ri6a_         212 NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK  268 (333)
T ss_dssp             CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred             ceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEE
Confidence            10  01111      1224577889999999776654 5789999999887654433

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.51  E-value=4.2e-13  Score=118.12  Aligned_cols=241  Identities=11%  Similarity=-0.034  Sum_probs=135.3

Q ss_pred             eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccC-------eEEEEecCCCCC
Q psy2762          18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGP-------VWQVAWAHPQFG   80 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~-------V~~v~~~~~~~~   80 (318)
                      .++|+|||++|+..+          .|++|++||..           +++++..+..|...       ...++|++  ||
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~-----------t~~~~~~i~~p~~~~~~~g~~p~~~a~Sp--DG  135 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-----------TFLPIADIELPDAPRFSVGPRVHIIGNCA--SS  135 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-----------TCCEEEEEEETTSCSCCBSCCTTSEEECT--TS
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECC-----------CCcEeeeecCCccceecccCCccceEECC--CC
Confidence            588999999888754          47889999986           34566666544322       23578874  58


Q ss_pred             cEEEEEE-CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce---eeec
Q psy2762          81 TLLASCS-YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES---RKIA  156 (318)
Q Consensus        81 ~~las~s-~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~---~~~~  156 (318)
                      ++|+.+. .++.+.+||+.+.+......  .+....    +.|.. ...++..+.||.+.+++..........   ....
T Consensus       136 k~l~va~~~~~~v~~~d~~~~~~~~~~~--~~~~~~----~~~~~-~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~  208 (368)
T d1mdah_         136 ACLLFFLFGSSAAAGLSVPGASDDQLTK--SASCFH----IHPGA-AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG  208 (368)
T ss_dssp             SCEEEEECSSSCEEEEEETTTEEEEEEE--CSSCCC----CEEEE-TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred             CEEEEEeCCCCeEEEEECCCCcEeEEee--ccCcce----EccCC-CceEEEEcCCCCEEEEEecCCceeeeeeeccccc
Confidence            8888776 46999999999887544433  222221    22222 345666778888877775433211100   0011


Q ss_pred             ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCC----------CCeeEE
Q psy2762         157 AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHS----------DWVRDV  226 (318)
Q Consensus       157 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~----------~~V~~v  226 (318)
                      .+........+.++                 +..+.  ..++.+++++...+..........+.          .....+
T Consensus       209 ~~~~~~~~~~~~~~-----------------g~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  269 (368)
T d1mdah_         209 AQNCSSQAAQANYP-----------------GMLVW--AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV  269 (368)
T ss_dssp             TSCBCSCCEEETTT-----------------TEEEE--CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred             ccccceeecccccC-----------------cEEEE--ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeE
Confidence            12222333444443                 22222  23344555555443222111111111          112346


Q ss_pred             EEccCCCCCccEEEEEeCC--------CeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCE--EEEEeCCCeEEEEE
Q psy2762         227 AWAPSWGLSKCMIASCSQD--------RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDI--LTVSCGDNSVSLWK  296 (318)
Q Consensus       227 ~~sp~~~~~~~~l~s~s~D--------~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~--l~s~~~D~~v~iW~  296 (318)
                      .++|+   .+..++....+        ..|++||..+...  ...+ .+...+.+++|+|||+.  ++++..|++|++||
T Consensus       270 a~~~~---~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~--~~~~-~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D  343 (368)
T d1mdah_         270 AKLKN---TDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD  343 (368)
T ss_dssp             EEETT---TTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECC-EEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             EEcCC---CCEEEEEecCCCceeecCCceEEEEECCCCcE--eEEe-cCCCceeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence            77776   23333332222        3588999877541  1112 23356889999999973  46667899999999


Q ss_pred             ECCCCce
Q psy2762         297 ENTDGAW  303 (318)
Q Consensus       297 ~~~~~~~  303 (318)
                      ..++...
T Consensus       344 ~~tgk~~  350 (368)
T d1mdah_         344 AASDQDQ  350 (368)
T ss_dssp             SSSCEEE
T ss_pred             CCCCCEE
Confidence            8776433

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.50  E-value=9.4e-13  Score=113.32  Aligned_cols=218  Identities=11%  Similarity=-0.013  Sum_probs=121.7

Q ss_pred             CCCcceeeeeeecCCCCEE-EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc------cccCeEEEEecCCCCCcE
Q psy2762          10 TGHEDMIHDAEMDYLGLYL-ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG------HSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l-~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~------h~~~V~~v~~~~~~~~~~   82 (318)
                      -.|...+.+++|+|||++| ++++.++.|++||+.           +++.+.++..      +...+..++|++  +|++
T Consensus        36 ~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~-----------t~~~~~~~~~~~~~~~~~~~~~~v~~s~--DG~~  102 (346)
T d1jmxb_          36 MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-----------TCKNTFHANLSSVPGEVGRSMYSFAISP--DGKE  102 (346)
T ss_dssp             CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT-----------TTEEEEEEESCCSTTEEEECSSCEEECT--TSSE
T ss_pred             cCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCc-----------cCeeeeeecccccccccCCceEEEEEec--CCCE
Confidence            4566778899999999987 566789999999997           3455554432      223456788874  5888


Q ss_pred             EEEEE------------CCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc
Q psy2762          83 LASCS------------YDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW  150 (318)
Q Consensus        83 las~s------------~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~  150 (318)
                      |+.++            .+..+.+|+..++..............+..+.++++  +.+++++   ..+.+|+......  
T Consensus       103 l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~--  175 (346)
T d1jmxb_         103 VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD--GSLYVAG---PDIYKMDVKTGKY--  175 (346)
T ss_dssp             EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT--SCEEEES---SSEEEECTTTCCE--
T ss_pred             EEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC--CEEEEeC---CcceEEEccCCCE--
Confidence            87765            467788888765432111111112234455566665  4444442   3455665422210  


Q ss_pred             ceeeecccccccceeeeCC--------------------------CCC---------CCccccccC-----------C--
Q psy2762         151 ESRKIAAHTIGCNAVSWGP--------------------------GIG---------SLSELDLKG-----------S--  182 (318)
Q Consensus       151 ~~~~~~~h~~~v~~~~~~p--------------------------~~~---------~~~~~~~~~-----------~--  182 (318)
                       ...+..+.. ...+.++|                          ...         .....+...           .  
T Consensus       176 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (346)
T d1jmxb_         176 -TVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTEL  253 (346)
T ss_dssp             -EEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred             -EEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccce
Confidence             011100000 00000000                          000         000000000           0  


Q ss_pred             ----CCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc
Q psy2762         183 ----KLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       183 ----~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~  257 (318)
                          .....+.+++.... +.|++||..+++......   +...+.+++|+|+    |++|++++.|+.|+|||..+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~---~~~~~~~va~s~D----G~~l~v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         254 YFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN---LDHTYYCVAFDKK----GDKLYLGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             EEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE---CSSCCCEEEECSS----SSCEEEESBSSEEEEEETTTTE
T ss_pred             eEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc---CCCCEEEEEEcCC----CCEEEEEeCCCcEEEEECccCC
Confidence                00011234555443 579999998887544332   3345899999996    8889999999999999998743

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.40  E-value=8.6e-12  Score=108.10  Aligned_cols=53  Identities=6%  Similarity=0.122  Sum_probs=39.5

Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc--EEEEEeCCCeEEEEEcCCCc
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC--MIASCSQDRKVIIWTSNDYV  257 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~--~l~s~s~D~~i~vw~~~~~~  257 (318)
                      +.|++||..+++......   +...+.++.|+|+    |+  ++++++.|++|+|||.++..
T Consensus       280 ~~v~v~d~~t~~~~~~~~---~~~~~~~~a~spD----G~~~l~v~~~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         280 RFVVVLDAKTGERLAKFE---MGHEIDSINVSQD----EKPLLYALSTGDKTLYIHDAESGE  334 (355)
T ss_dssp             EEEEEEETTTCCEEEEEE---EEEEECEEEECCS----SSCEEEEEETTTTEEEEEETTTCC
T ss_pred             CeEEEEeCCCCcEEEEec---CCCCEEEEEEcCC----CCeEEEEEECCCCEEEEEECCCCC
Confidence            479999998876543332   2244889999997    44  56778889999999998754

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.39  E-value=3.5e-10  Score=98.57  Aligned_cols=240  Identities=10%  Similarity=-0.091  Sum_probs=133.6

Q ss_pred             eeeecCCCCEEEEee----------CCCcEEEEEcCCCcCCCC-----C-------CC------CcceE--EE-------
Q psy2762          18 DAEMDYLGLYLATCS----------SDHTVKVFNLDRNLKKDD-----S-------HS------QKGTL--IA-------   60 (318)
Q Consensus        18 ~~~~~~~g~~l~s~s----------~D~~v~vwd~~~~~~~~~-----~-------~~------~~~~~--~~-------   60 (318)
                      .++|+|||++|+.++          .++.|.|||.........     .       ..      ..++.  +.       
T Consensus        70 ~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  149 (373)
T d2madh_          70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCc
Confidence            689999999999875          467899999874321100     0       00      00000  00       


Q ss_pred             ---------EecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEec----CCCcCeEEEEeeCCCCCc
Q psy2762          61 ---------ELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYN----NHDSSVNSIAWAPKEFGL  127 (318)
Q Consensus        61 ---------~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~----~h~~~v~~v~~~p~~~~~  127 (318)
                               ....|.....++.++++ ....+++.+.|+++.+|+.............    +.......+.+.++  + 
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~s~~-g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-  225 (373)
T d2madh_         150 VGLVVQGGSSDDQLLSSPTCYHIHPG-APSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS--G-  225 (373)
T ss_pred             eEEeeccCCeEEEEeccceeEEEecC-CCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCC--c-
Confidence                     01123334456666542 2346678899999999998776543322211    11122334445554  3 


Q ss_pred             EEEEeecCCeEEEEEeecCCCCcceeeeccccccc----------ceeeeCCCCCCCccccccCCCCCCccceEEEecCC
Q psy2762         128 ILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGC----------NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCD  197 (318)
Q Consensus       128 ~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v----------~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d  197 (318)
                      .++..+.++.+.+|+...... ........+....          ..++++|+......       ....+..+++...+
T Consensus       226 ~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~~~~~~~~~~~  297 (373)
T d2madh_         226 RIVWPVYSGKILQADISAAGA-TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL-------LTSEQSAWKLHAAA  297 (373)
T ss_pred             eEEEecCCceEEEEEcCCCeE-EEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEE-------ecCCCceEEeecCC
Confidence            345566788888887643321 0111111222222          23344443211100       00113457788888


Q ss_pred             CeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc--EEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEE
Q psy2762         198 NLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC--MIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVS  275 (318)
Q Consensus       198 ~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~--~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~  275 (318)
                      +.|.+||..+++...  .+ .+...+..+.|+|+    |+  ++++++.|++|+|||..+...  ...+..+......++
T Consensus       298 ~~v~~~d~~t~~~~~--~~-~~~~~~~~~a~spD----G~~~l~vt~~~d~~v~v~D~~tg~~--~~~~~~~g~~P~~l~  368 (373)
T d2madh_         298 KEVTSVTGLVGQTSS--QI-SLGHDVDAISVAQD----GGPDLYALSAGTEVLHIYDAGAGDQ--DQSTVELGSGPQVLS  368 (373)
T ss_pred             CeEEEEECCCCcEEE--Ee-cCCCCeeEEEECCC----CCEEEEEEeCCCCeEEEEECCCCCE--EEEECCCCCCCcEEE
Confidence            999999998876433  22 35566899999997    55  457899999999999987642  334444444445555


Q ss_pred             EcC
Q psy2762         276 WSL  278 (318)
Q Consensus       276 ~sp  278 (318)
                      +.+
T Consensus       369 ~~~  371 (373)
T d2madh_         369 VMN  371 (373)
T ss_pred             Eec
Confidence            543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.39  E-value=2.1e-11  Score=110.64  Aligned_cols=116  Identities=15%  Similarity=0.251  Sum_probs=82.8

Q ss_pred             CCCcceeeeeeecCCCCEEEEeeC---------CCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCC
Q psy2762          10 TGHEDMIHDAEMDYLGLYLATCSS---------DHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFG   80 (318)
Q Consensus        10 ~gH~~~v~~~~~~~~g~~l~s~s~---------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~   80 (318)
                      .+|...|.++.|||||++|+.++.         ++.+.|||+..           + .+..+..|.+.+..+.|++  ||
T Consensus        58 ~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~-----------~-~~~~l~~~~~~~~~~~~SP--DG  123 (470)
T d2bgra1          58 DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-----------R-QLITEERIPNNTQWVTWSP--VG  123 (470)
T ss_dssp             TTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-----------T-EECCSSCCCTTEEEEEECS--ST
T ss_pred             hhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCC-----------C-cccccccCCcccccccccc--Cc
Confidence            456788999999999999998753         56788999873           2 3566888999999999985  59


Q ss_pred             cEEEEEECCCeEEEEeCCCCcEEEEEEec-------C---------CCcCeEEEEeeCCCCCcEEEEeecCCe-EEEEE
Q psy2762          81 TLLASCSYDRKVIIWRGDNGNWFKYYEYN-------N---------HDSSVNSIAWAPKEFGLILACGSSDGT-ISFLT  142 (318)
Q Consensus        81 ~~las~s~Dg~v~vWd~~~~~~~~~~~~~-------~---------h~~~v~~v~~~p~~~~~~lasgs~d~~-i~i~~  142 (318)
                      +++|.. .++.+.+|+..++...+.....       +         ..+....+.|+||  +..+|....|.. +..+.
T Consensus       124 ~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPD--Gk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         124 HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPN--GTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTT--SSEEEEEEEECTTCCEEE
T ss_pred             ceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCC--CCccceeEecCCcCceEE
Confidence            999985 5789999998876533321100       0         1223456789999  667877766543 44443

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.13  E-value=2.2e-08  Score=85.09  Aligned_cols=231  Identities=12%  Similarity=-0.019  Sum_probs=139.7

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      .+..++++|||+++++...+++|..|+.+            ++ ...+....+.+.+++|.+  +|+++++...++.+.+
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~------------g~-~~~~~~~~~~~~gla~~~--dG~l~v~~~~~~~~~~   93 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD------------GN-QQIHATVEGKVSGLAFTS--NGDLVATGWNADSIPV   93 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT------------CC-EEEEEECSSEEEEEEECT--TSCEEEEEECTTSCEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC------------CC-EEEEEcCCCCcceEEEcC--CCCeEEEecCCceEEE
Confidence            57889999999999999999988777754            22 233445567789999964  5898888888888887


Q ss_pred             EeCCCC--cEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccc---------cccc
Q psy2762          95 WRGDNG--NWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHT---------IGCN  163 (318)
Q Consensus        95 Wd~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~---------~~v~  163 (318)
                      |+....  ........ ......+.+++.++  +.++++-+.++.|..++..  .............         ...+
T Consensus        94 ~~~~~~~~~~~~~~~~-~~~~~~n~i~~~~~--g~~~v~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~n  168 (302)
T d2p4oa1          94 VSLVKSDGTVETLLTL-PDAIFLNGITPLSD--TQYLTADSYRGAIWLIDVV--QPSGSIWLEHPMLARSNSESVFPAAN  168 (302)
T ss_dssp             EEEECTTSCEEEEEEC-TTCSCEEEEEESSS--SEEEEEETTTTEEEEEETT--TTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred             EEecccccceeecccc-CCccccceeEEccC--CCEEeeccccccceeeecc--CCcceeEecCCccceeeccCcccccc
Confidence            775432  22222222 23456889999988  6777777777766555432  2111111111100         0111


Q ss_pred             eeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         164 AVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      .+.+..                  ...+++.+..+.|+.++.....................++|.++    |.++++..
T Consensus       169 gi~~~~------------------~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~d----G~l~va~~  226 (302)
T d2p4oa1         169 GLKRFG------------------NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVE----GNLYGATH  226 (302)
T ss_dssp             EEEEET------------------TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTT----CCEEEECB
T ss_pred             cccccC------------------CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCC----CCEEEEEc
Confidence            222221                  24566777888888887654321111111112233567999996    77888888


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEE---cCCCCEEEEEeC
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW---SLTGDILTVSCG  288 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~---spdg~~l~s~~~  288 (318)
                      .++.|..++...... ........-....+|+|   +||++.|..++.
T Consensus       227 ~~~~V~~i~p~G~~~-~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~  273 (302)
T d2p4oa1         227 IYNSVVRIAPDRSTT-IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  273 (302)
T ss_dssp             TTCCEEEECTTCCEE-EEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             CCCcEEEECCCCCEE-EEEecCCCCCCceEEEEcCCCCCCCEEEEECC
Confidence            889999997765321 01111112245789999   788888866543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.07  E-value=3.3e-09  Score=94.43  Aligned_cols=235  Identities=11%  Similarity=0.037  Sum_probs=134.3

Q ss_pred             CcceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccccCeEEEEecCCCCCc--EEEEEE
Q psy2762          12 HEDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHSGPVWQVAWAHPQFGT--LLASCS   87 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~~~~~~~--~las~s   87 (318)
                      |...+....++|||++|+. ...+++|.++|+..           ++....++ .+......++|++  +|+  +++..+
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t-----------~k~~~ii~iP~g~gphgi~~sp--dg~t~YV~~~~  136 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDI-----------MKTDKITHIPNVQAIHGLRLQK--VPKTNYVFCNA  136 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTT-----------TEEEEEEECTTCCCEEEEEECC--SSBCCEEEEEE
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCC-----------CcEeeEEecCCCCCccceEEec--cCCEEEEEecc
Confidence            4456666778899999855 45788999999973           34444443 3456788899974  355  555554


Q ss_pred             CCC-----------------eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCC-eEEEEEeecCCCC
Q psy2762          88 YDR-----------------KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDG-TISFLTYMSDTNS  149 (318)
Q Consensus        88 ~Dg-----------------~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~-~i~i~~~~~~~~~  149 (318)
                      .+.                 .+..+|..+.........   ......++|+|+  +.++.+.+.+. .+..++.......
T Consensus       137 ~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v---~~~p~~v~~spd--Gk~a~vt~~nse~~~~id~~t~~~~  211 (441)
T d1qnia2         137 EFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV---DGNLDNTDADYT--GKYATSTCYNSERAVDLAGTMRNDR  211 (441)
T ss_dssp             CSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE---SSCCCCEEECSS--SSEEEEEESCTTCCSSHHHHTCSSB
T ss_pred             CCcccccCcccccccccccceEEeecCccceeeEEEec---CCCccceEECCC--CCEEEEEecCCCceEEEeccCcceE
Confidence            432                 234566666543322222   234678899999  55555555432 2211111000000


Q ss_pred             -------------------------------------cceeeecccccccceeeeCCCCCCCccccccCCCCCCccce-E
Q psy2762         150 -------------------------------------WESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKR-L  191 (318)
Q Consensus       150 -------------------------------------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-l  191 (318)
                                                           .....+.... ....+..+|+                 +++ +
T Consensus       212 d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgk-sPhGv~vSPD-----------------Gkyl~  273 (441)
T d1qnia2         212 DWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPK-NPHGLNTSPD-----------------GKYFI  273 (441)
T ss_dssp             CEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBS-SCCCEEECTT-----------------SCEEE
T ss_pred             EEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCC-CccCceECCC-----------------CCEEE
Confidence                                                 0000010000 0122333333                 444 5


Q ss_pred             EEecCCCeEEEEEccCCeEEEEEEcccCCC-------------CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCc-
Q psy2762         192 VSGGCDNLIKIWKQEGDKWIEETKLENHSD-------------WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYV-  257 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~~~~~~~~~~h~~-------------~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~-  257 (318)
                      +++..+++|.|||+++-+    ..++++-.             ......|.++    |..+.|.+.|..|..|+++... 
T Consensus       274 ~~~~~~~tvsv~d~~k~~----~~~~~~~~~~~~~~~~~~~glgplh~~fd~~----g~~yts~~~ds~v~kw~~~~~~~  345 (441)
T d1qnia2         274 ANGKLSPTVSVIAIDKLD----DLFEDKIELRDTIVAEPELGLGPLHTTFDGR----GNAYTTLFIDSQVCKWNIADAIK  345 (441)
T ss_dssp             EECTTSSBEEEEEGGGHH----HHTTTSSCGGGGEEECCBCCSCEEEEEECSS----SEEEEEETTTTEEEEEEHHHHHH
T ss_pred             EeCCcCCcEEEEEeehhh----hHhhccCCcceEEEeecccccCcccceecCC----ceEEEcccccceEEEeccchhhh
Confidence            788999999999976421    00111111             1233478775    7788999999999999974211 


Q ss_pred             ------cee-eEEe-----eecCCcEEEEEEcCCCCEEEEE---eCCC
Q psy2762         258 ------TWT-PFIM-----NTFDDVVWNVSWSLTGDILTVS---CGDN  290 (318)
Q Consensus       258 ------~~~-~~~~-----~~~~~~v~~v~~spdg~~l~s~---~~D~  290 (318)
                            .+. ...+     .+|...+.+.+|+|||++|+|+   +.|+
T Consensus       346 ~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr  393 (441)
T d1qnia2         346 HYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDR  393 (441)
T ss_dssp             HHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGG
T ss_pred             hhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCcccccc
Confidence                  011 1112     4677778888999999999999   4554

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.02  E-value=2.6e-07  Score=80.56  Aligned_cols=265  Identities=9%  Similarity=0.007  Sum_probs=139.7

Q ss_pred             CCcceeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEe-cccccCeEEEEecCCCCCc--EEEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAEL-KGHSGPVWQVAWAHPQFGT--LLASCS   87 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~~~~~~~--~las~s   87 (318)
                      .+...+.-++|+|++++|.+... +.+..|.++..          +...... ....+....+.+++  +++  +++++.
T Consensus        37 ~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~----------~~~~~~~~~~~~~~p~~v~~~~--~~~~~~v~~a~  103 (365)
T d1jofa_          37 PQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSP----------TEIVHEASHPIGGHPRANDADT--NTRAIFLLAAK  103 (365)
T ss_dssp             CTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEET----------TEEEEEEEEECCSSGGGGCTTS--CCEEEEEEECS
T ss_pred             cCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCC----------CCeEEEeeecCCCCcEEEEECC--CCCEEEEEEec
Confidence            34556677999999999988764 57888887621          1221111 11112233344432  344  233332


Q ss_pred             C-CCeEEEEeCCC-------------CcE---EEEEEecCCCcCeEEEEeeCCCCCcEEEEe-ecCCeEEEEEeecCCCC
Q psy2762          88 Y-DRKVIIWRGDN-------------GNW---FKYYEYNNHDSSVNSIAWAPKEFGLILACG-SSDGTISFLTYMSDTNS  149 (318)
Q Consensus        88 ~-Dg~v~vWd~~~-------------~~~---~~~~~~~~h~~~v~~v~~~p~~~~~~lasg-s~d~~i~i~~~~~~~~~  149 (318)
                      + .+.|..+.+..             ...   ..... ......+.++.|+|+  ++++.+. .....|.+++.......
T Consensus       104 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~h~h~v~~sPd--G~~l~v~d~g~d~v~~~~~~~~g~~  180 (365)
T d1jofa_         104 QPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE-YQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEV  180 (365)
T ss_dssp             STTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE-CCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCE
T ss_pred             CCCCEEEEeEccCCCCcceeEeeeecceecCcccCcc-cCCCCcceEEEECCC--CCEEEEeeCCCCEEEEEEccCCCce
Confidence            2 23443332211             110   11111 112334779999999  5544444 33457777765322211


Q ss_pred             cceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEE---EEEEc--------
Q psy2762         150 WESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWI---EETKL--------  216 (318)
Q Consensus       150 ~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~---~~~~~--------  216 (318)
                      .......  ....+...++|+|+.                ....++.-.+++|.+|+.+.+...   .....        
T Consensus       181 ~~~~~~~~~~~g~gPr~i~f~pdg----------------~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~  244 (365)
T d1jofa_         181 ELVGSVDAPDPGDHPRWVAMHPTG----------------NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP  244 (365)
T ss_dssp             EEEEEEECSSTTCCEEEEEECTTS----------------SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred             eeccceeecCCCCceEEEEECCCC----------------ceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccccc
Confidence            1111111  223455678899873                123466677889999998654311   11111        


Q ss_pred             ------ccCCCCeeEEEEccCCCCCccEEEEEeC-C-----CeEEEEEcCCCccee-eEEee---ecCCcEEEEEEcC-C
Q psy2762         217 ------ENHSDWVRDVAWAPSWGLSKCMIASCSQ-D-----RKVIIWTSNDYVTWT-PFIMN---TFDDVVWNVSWSL-T  279 (318)
Q Consensus       217 ------~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D-----~~i~vw~~~~~~~~~-~~~~~---~~~~~v~~v~~sp-d  279 (318)
                            ..+......+.++|+    |++|+++.. +     ..|..|++....... ...+.   ........++++| +
T Consensus       245 ~~~~~~~~~~~~~~~i~~spd----G~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~  320 (365)
T d1jofa_         245 DRDPETGKGLYRADVCALTFS----GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS  320 (365)
T ss_dssp             CBCTTTSSBSEEEEEEEECTT----SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred             ccccccccccCCccceEECCC----CCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCC
Confidence                  012223567899996    777766532 2     237777765532211 11111   1224567899998 8


Q ss_pred             CCEEEEEe-CCCeEEEEEECCCCceEEEeeeccc
Q psy2762         280 GDILTVSC-GDNSVSLWKENTDGAWQCITEMGKT  312 (318)
Q Consensus       280 g~~l~s~~-~D~~v~iW~~~~~~~~~~~~~~~~~  312 (318)
                      |++|+.+. .+++|.+|+++.++ ...+.++...
T Consensus       321 G~~l~va~~~s~~v~v~~~~~~~-l~~~~~~~vp  353 (365)
T d1jofa_         321 DEWMAITDDQEGWLEIYRWKDEF-LHRVARVRIP  353 (365)
T ss_dssp             TTEEEEECSSSCEEEEEEEETTE-EEEEEEEECC
T ss_pred             CCEEEEEeCCCCeEEEEEEeCCc-CcEEEEEECC
Confidence            99887775 57899999987653 4455555443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.01  E-value=7.2e-07  Score=74.56  Aligned_cols=236  Identities=11%  Similarity=0.167  Sum_probs=141.0

Q ss_pred             eeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecc------cccCeEEEEecCCCCCcEEEE-EEC
Q psy2762          16 IHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKG------HSGPVWQVAWAHPQFGTLLAS-CSY   88 (318)
Q Consensus        16 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~------h~~~V~~v~~~~~~~~~~las-~s~   88 (318)
                      -+.++++++|+++++-...+.|++||.+            ++.+..+..      ....-..+.+.. ..+..++. .+.
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~------------G~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~   91 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE------------GRFKFQFGECGKRDSQLLYPNRVAVVR-NSGDIIVTERSP   91 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT------------SCEEEEECCBSSSTTCBSSEEEEEEET-TTTEEEEEECGG
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC------------CCEEEEecccCCCcccccccccccccc-cccccceeccCC
Confidence            5789999999999987788999999875            344444421      111223444432 23444443 344


Q ss_pred             CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeee--cccccccceee
Q psy2762          89 DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKI--AAHTIGCNAVS  166 (318)
Q Consensus        89 Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~--~~h~~~v~~~~  166 (318)
                      .+.|.+++.. +.....+. .........+++.++  +.++++....+.+.+++.  .. . .+..+  ..+......++
T Consensus        92 ~~~i~~~~~~-g~~~~~~~-~~~~~~p~~~avd~~--G~i~v~~~~~~~~~~~~~--~g-~-~~~~~g~~~~~~~~~~i~  163 (279)
T d1q7fa_          92 THQIQIYNQY-GQFVRKFG-ATILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQ--NG-N-VLHKFGCSKHLEFPNGVV  163 (279)
T ss_dssp             GCEEEEECTT-SCEEEEEC-TTTCSCEEEEEECTT--SCEEEEETTTTEEEEECT--TS-C-EEEEEECTTTCSSEEEEE
T ss_pred             cccccccccc-ccceeecC-CCcccccceeccccC--CcEEEEeeccceeeEecc--CC-c-eeecccccccccccceee
Confidence            5677777754 33322221 123445678888887  566666555566655542  11 1 11111  12333344555


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC-C
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ-D  245 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D  245 (318)
                      +.++                 +..+++....+.|++||..... .....-.+.......|++.|+    |.++++-+. +
T Consensus       164 ~d~~-----------------g~i~v~d~~~~~V~~~d~~G~~-~~~~g~~g~~~~P~giavD~~----G~i~Vad~~~~  221 (279)
T d1q7fa_         164 VNDK-----------------QEIFISDNRAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSN----GEILIADNHNN  221 (279)
T ss_dssp             ECSS-----------------SEEEEEEGGGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTT----CCEEEEECSSS
T ss_pred             eccc-----------------eeEEeeeccccceeeeecCCce-eeeecccccccCCcccccccC----CeEEEEECCCC
Confidence            5553                 4567788888999999986543 222222455566789999996    666666443 5


Q ss_pred             CeEEEEEcCCCcceeeEEeee--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         246 RKVIIWTSNDYVTWTPFIMNT--FDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       246 ~~i~vw~~~~~~~~~~~~~~~--~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      +.|.+++.....   ...+..  .....+.|++.|||++++ +..++.|++|+..
T Consensus       222 ~~v~~f~~~G~~---~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~  272 (279)
T d1q7fa_         222 FNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYV  272 (279)
T ss_dssp             CEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECS
T ss_pred             cEEEEECCCCCE---EEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEee
Confidence            579999865432   111211  123578999999997654 6689999999844

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.95  E-value=6.5e-08  Score=84.09  Aligned_cols=247  Identities=9%  Similarity=-0.068  Sum_probs=139.5

Q ss_pred             CCcceeeeeeecCCCCEE---EEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEE
Q psy2762          11 GHEDMIHDAEMDYLGLYL---ATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCS   87 (318)
Q Consensus        11 gH~~~v~~~~~~~~g~~l---~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s   87 (318)
                      ++.+....++..++++..   ++...+++.+||-++.         ..++++.++.++..+  .++|++  ||+.|+.++
T Consensus        17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~---------~~~~~~~~~~~~~~~--~~a~sp--Dg~~i~~~~   83 (368)
T d1mdah_          17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCA---------GCGVTLGHSLGAFLS--LAVAGH--SGSDFALAS   83 (368)
T ss_dssp             CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEET---------TTTEEEEEEEECTTC--EEEECT--TSSCEEEEE
T ss_pred             ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeC---------CCCcEEEEEeCCCCC--cceECC--CCCEEEEEc
Confidence            566777778888898852   3355667766664431         246777777776655  478874  588888754


Q ss_pred             ----------CCCeEEEEeCCCCcEEEEEEecCC-----CcCeEEEEeeCCCCCcEEEEee-cCCeEEEEEeecCCCCcc
Q psy2762          88 ----------YDRKVIIWRGDNGNWFKYYEYNNH-----DSSVNSIAWAPKEFGLILACGS-SDGTISFLTYMSDTNSWE  151 (318)
Q Consensus        88 ----------~Dg~v~vWd~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~~~~~~~~~~  151 (318)
                                .|++|++||..+.+......+..+     ......++|+||  +++++.++ .++.|.+||....+   .
T Consensus        84 ~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpD--Gk~l~va~~~~~~v~~~d~~~~~---~  158 (368)
T d1mdah_          84 TSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS--SACLLFFLFGSSAAAGLSVPGAS---D  158 (368)
T ss_dssp             EEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTT--SSCEEEEECSSSCEEEEEETTTE---E
T ss_pred             ccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCC--CCEEEEEeCCCCeEEEEECCCCc---E
Confidence                      478899999998875554433221     112346899999  55555554 57899999974432   1


Q ss_pred             eeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEE----EEEcccCCCCeeEEE
Q psy2762         152 SRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIE----ETKLENHSDWVRDVA  227 (318)
Q Consensus       152 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~----~~~~~~h~~~V~~v~  227 (318)
                      ...+..+....    ..|..                ...++..+.||++.+++........    ...+..+...+..+.
T Consensus       159 ~~~~~~~~~~~----~~~~~----------------~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (368)
T d1mdah_         159 DQLTKSASCFH----IHPGA----------------AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ  218 (368)
T ss_dssp             EEEEECSSCCC----CEEEE----------------TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE
T ss_pred             eEEeeccCcce----EccCC----------------CceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecc
Confidence            12222211110    11110                1356778888988888765432111    112234445556677


Q ss_pred             EccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeec----------CCcEEEEEEcCCCCEEEEEeCC--------
Q psy2762         228 WAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTF----------DDVVWNVSWSLTGDILTVSCGD--------  289 (318)
Q Consensus       228 ~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~----------~~~v~~v~~spdg~~l~s~~~D--------  289 (318)
                      +.++    +..+.+.  .+.+.+++...............          ......++++|++..+.....+        
T Consensus       219 ~~~~----g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~  292 (368)
T d1mdah_         219 ANYP----GMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA  292 (368)
T ss_dssp             ETTT----TEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred             cccC----cEEEEec--CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecC
Confidence            7775    5555444  34455555443221000000000          0112357889998887665322        


Q ss_pred             -CeEEEEEECCCC
Q psy2762         290 -NSVSLWKENTDG  301 (318)
Q Consensus       290 -~~v~iW~~~~~~  301 (318)
                       ..+++||..++.
T Consensus       293 ~~~v~v~D~~t~~  305 (368)
T d1mdah_         293 AENTSSVTASVGQ  305 (368)
T ss_dssp             EEEEEEEESSSCC
T ss_pred             CceEEEEECCCCc
Confidence             358888876654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.95  E-value=1.7e-07  Score=83.26  Aligned_cols=207  Identities=9%  Similarity=-0.039  Sum_probs=119.4

Q ss_pred             CCcEEEEE-ECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCe-----------------EEE
Q psy2762          79 FGTLLASC-SYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGT-----------------ISF  140 (318)
Q Consensus        79 ~~~~las~-s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~-----------------i~i  140 (318)
                      ||++|+.. ..+.+|.++|+.+.+...+..++ +...+..++|+|++...++++.+.+..                 +..
T Consensus        82 DGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP-~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~  160 (441)
T d1qnia2          82 DGKYLFINDKANTRVARIRLDIMKTDKITHIP-NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTA  160 (441)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECT-TCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCCcEeeEEecC-CCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEe
Confidence            58877555 56789999999988765555443 456788999999865456666554431                 111


Q ss_pred             EEeecCCCCcceeeecccccccceeeeCCCCCCCcccccc----------CCC---------------CCCccceEEEec
Q psy2762         141 LTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLK----------GSK---------------LGGVAKRLVSGG  195 (318)
Q Consensus       141 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~----------~~~---------------~~~~~~~lasgs  195 (318)
                      +|.....   ...++.. ......+.++|+..........          ...               ....++++.. +
T Consensus       161 iD~~t~~---v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v-~  235 (441)
T d1qnia2         161 IDAETMD---VAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTI-G  235 (441)
T ss_dssp             EETTTCS---EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCC-T
T ss_pred             ecCccce---eeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEe-C
Confidence            2221111   1111111 1235667788875432211110          000               0011233333 4


Q ss_pred             CCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCcc-EEEEEeCCCeEEEEEcCCCcc---------eeeEEee
Q psy2762         196 CDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKC-MIASCSQDRKVIIWTSNDYVT---------WTPFIMN  265 (318)
Q Consensus       196 ~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~-~l~s~s~D~~i~vw~~~~~~~---------~~~~~~~  265 (318)
                      .++.+.|++....+.  ...+...+. ...+.++|+    |+ .++++..|.+|.|||+++...         ....-..
T Consensus       236 ~~~v~vvd~~~~~~v--~~~IPvgks-PhGv~vSPD----Gkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~  308 (441)
T d1qnia2         236 DSKVPVVDGRGESEF--TRYIPVPKN-PHGLNTSPD----GKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEP  308 (441)
T ss_dssp             TCCCCEEECSSSCSS--EEEECCBSS-CCCEEECTT----SCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECC
T ss_pred             CCCcEEEEcccCCce--EEEEeCCCC-ccCceECCC----CCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeec
Confidence            456777776555432  233444444 478999997    55 557788899999999765220         0000000


Q ss_pred             ecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEEC
Q psy2762         266 TFDDVVWNVSWSLTGDILTVSCGDNSVSLWKEN  298 (318)
Q Consensus       266 ~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~  298 (318)
                      ...-.....+|+++|+.+.|..-|.+|..|++.
T Consensus       309 ~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         309 ELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             BCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred             ccccCcccceecCCceEEEcccccceEEEeccc
Confidence            011135678999999999988899999999963

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.92  E-value=8.9e-07  Score=74.84  Aligned_cols=217  Identities=11%  Similarity=0.041  Sum_probs=136.4

Q ss_pred             ceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          56 GTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        56 ~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      .+++.++... ..+..+++.+  +|+++++...+++|..|+.... ....   ......+.+++|.|+  +.++++...+
T Consensus        18 ~~v~~~~p~~-~~~e~iAv~p--dG~l~vt~~~~~~I~~i~p~g~-~~~~---~~~~~~~~gla~~~d--G~l~v~~~~~   88 (302)
T d2p4oa1          18 AKIITSFPVN-TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN-QQIH---ATVEGKVSGLAFTSN--GDLVATGWNA   88 (302)
T ss_dssp             EEEEEEECTT-CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC-EEEE---EECSSEEEEEEECTT--SCEEEEEECT
T ss_pred             ccEEEECCCC-CCcCCEEECC--CCCEEEEeCCCCEEEEEeCCCC-EEEE---EcCCCCcceEEEcCC--CCeEEEecCC
Confidence            3556666532 2688899864  5999999999999999986643 2222   234567899999998  6688888778


Q ss_pred             CeEEEEEeecCCCCcceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEE  213 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~  213 (318)
                      +.+..++.......  ...+.  ......+.+.+.++                 +.++++-+.++.+..++...+.....
T Consensus        89 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~n~i~~~~~-----------------g~~~v~~~~~~~i~~~~~~~~~~~~~  149 (302)
T d2p4oa1          89 DSIPVVSLVKSDGT--VETLLTLPDAIFLNGITPLSD-----------------TQYLTADSYRGAIWLIDVVQPSGSIW  149 (302)
T ss_dssp             TSCEEEEEECTTSC--EEEEEECTTCSCEEEEEESSS-----------------SEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ceEEEEEecccccc--eeeccccCCccccceeEEccC-----------------CCEEeeccccccceeeeccCCcceeE
Confidence            88877776443321  12221  22233566677665                 46778888888888888776542211


Q ss_pred             EE--------cccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEE
Q psy2762         214 TK--------LENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTV  285 (318)
Q Consensus       214 ~~--------~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s  285 (318)
                      ..        ..........+.++.     +.++++.+..+.|..++.....................++|++||+++++
T Consensus       150 ~~~~~~~~~~~~~~~~~~ngi~~~~-----~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va  224 (302)
T d2p4oa1         150 LEHPMLARSNSESVFPAANGLKRFG-----NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGA  224 (302)
T ss_dssp             EECGGGSCSSTTCCSCSEEEEEEET-----TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEE
T ss_pred             ecCCccceeeccCcccccccccccC-----CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEE
Confidence            11        011223356677764     45677777888888888765432111111112234557999999998887


Q ss_pred             EeCCCeEEEEEECCCCceEEEe
Q psy2762         286 SCGDNSVSLWKENTDGAWQCIT  307 (318)
Q Consensus       286 ~~~D~~v~iW~~~~~~~~~~~~  307 (318)
                      ...++.|..+  +.+|+...+.
T Consensus       225 ~~~~~~V~~i--~p~G~~~~~~  244 (302)
T d2p4oa1         225 THIYNSVVRI--APDRSTTIIA  244 (302)
T ss_dssp             CBTTCCEEEE--CTTCCEEEEE
T ss_pred             EcCCCcEEEE--CCCCCEEEEE
Confidence            7788876665  5556554443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.86  E-value=6e-09  Score=93.99  Aligned_cols=152  Identities=14%  Similarity=0.149  Sum_probs=103.2

Q ss_pred             EEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcce--eeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEe
Q psy2762         117 SIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWES--RKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG  194 (318)
Q Consensus       117 ~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg  194 (318)
                      .+.|.++  +.++.  ..|+.|.+|+...+.....+  ..+..|...+.++.|||+                 +++||.+
T Consensus        21 ~~~W~~d--~~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpD-----------------g~~i~~~   79 (470)
T d2bgra1          21 SLRWISD--HEYLY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD-----------------GQFILLE   79 (470)
T ss_dssp             CCEECSS--SEEEE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTT-----------------SSEEEEE
T ss_pred             CCEeCCC--CEEEE--EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCC-----------------CCEEEEE
Confidence            4778887  55554  45778999987655421100  122345677899999998                 4677776


Q ss_pred             cC---------CCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE---
Q psy2762         195 GC---------DNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF---  262 (318)
Q Consensus       195 s~---------d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---  262 (318)
                      +.         ++.+.|||+.+++.   ..+..|...+..+.|||+    |..||.. .|+.+.+|+..+.......   
T Consensus        80 ~~~~~~~r~s~~~~~~l~d~~~~~~---~~l~~~~~~~~~~~~SPD----G~~ia~~-~~~~l~~~~~~~g~~~~~t~~~  151 (470)
T d2bgra1          80 YNYVKQWRHSYTASYDIYDLNKRQL---ITEERIPNNTQWVTWSPV----GHKLAYV-WNNDIYVKIEPNLPSYRITWTG  151 (470)
T ss_dssp             EEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCTTEEEEEECSS----TTCEEEE-ETTEEEEESSTTSCCEECCSCC
T ss_pred             ECCcceeeeccCceEEEEECCCCcc---cccccCCccccccccccC----cceeeEe-ecccceEEECCCCceeeeeecc
Confidence            43         56788999998853   456788899999999996    7888886 5778999988765422110   


Q ss_pred             ----Eeee---------cCCcEEEEEEcCCCCEEEEEeCCCe-EEEEEE
Q psy2762         263 ----IMNT---------FDDVVWNVSWSLTGDILTVSCGDNS-VSLWKE  297 (318)
Q Consensus       263 ----~~~~---------~~~~v~~v~~spdg~~l~s~~~D~~-v~iW~~  297 (318)
                          ...+         ..+....+.|||||++||....|.+ |+.|..
T Consensus       152 ~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~  200 (470)
T d2bgra1         152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY  200 (470)
T ss_dssp             BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred             CCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence                0000         1123455789999999999887654 665554

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.81  E-value=5.2e-06  Score=68.06  Aligned_cols=205  Identities=12%  Similarity=0.130  Sum_probs=108.7

Q ss_pred             EecccccCeEEEEecCCCCCcEEEEEECCC---eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCC
Q psy2762          61 ELKGHSGPVWQVAWAHPQFGTLLASCSYDR---KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDG  136 (318)
Q Consensus        61 ~~~~h~~~V~~v~~~~~~~~~~las~s~Dg---~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~  136 (318)
                      .+..+...+.+-+|+|  ||+.||-.....   .+.+.+...+....   +..+........|+|++  ..++... .++
T Consensus        33 ~l~~~~~~~~sP~wSP--DGk~IAf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~spdg--~~i~~~~~~~~  105 (269)
T d2hqsa1          33 VVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAVRQ---VASFPRHNGAPAFSPDG--SKLAFALSKTG  105 (269)
T ss_dssp             EEEEESSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCEEE---EECCSSCEEEEEECTTS--SEEEEEECTTS
T ss_pred             EEecCCCceeeeEECC--CCCEEEEEEeeccCcceeeeecccCceeE---EeeeecccccceecCCC--CeeeEeeecCC
Confidence            3444577788999985  599998766543   35555655554322   33467788899999994  4444433 333


Q ss_pred             eEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEE--EccCCeEEEEE
Q psy2762         137 TISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIW--KQEGDKWIEET  214 (318)
Q Consensus       137 ~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iw--d~~~~~~~~~~  214 (318)
                      ...++.......  ................++++.                ...+++...++...||  +...+..   .
T Consensus       106 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~g~~~i~~~~~~~~~~---~  164 (269)
T d2hqsa1         106 SLNLYVMDLASG--QIRQVTDGRSNNTEPTWFPDS----------------QNLAFTSDQAGRPQVYKVNINGGAP---Q  164 (269)
T ss_dssp             SCEEEEEETTTC--CEEECCCCSSCEEEEEECTTS----------------SEEEEEECTTSSCEEEEEETTSSCC---E
T ss_pred             ccceeecccccc--cceeeeecccccccccccccc----------------ccceecccccCCceEeeeecccccc---e
Confidence            333332222211  111111112222223344431                2345555566655555  4444322   2


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeC-CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEEEEEeC---CC
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQ-DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDILTVSCG---DN  290 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~-D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l~s~~~---D~  290 (318)
                      .+..+........|+|+    +..++..+. .+...+|........ . .............|||||+.|+-.+.   ..
T Consensus       165 ~~~~~~~~~~~~~~spd----g~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~  238 (269)
T d2hqsa1         165 RITWEGSQNQDADVSSD----GKFMVMVSSNGGQQHIAKQDLATGG-V-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGS  238 (269)
T ss_dssp             ECCCSSSEEEEEEECTT----SSEEEEEEECSSCEEEEEEETTTCC-E-EECCCSSSCEEEEECTTSSEEEEEEEETTEE
T ss_pred             eeecccccccccccccc----cceeEEEeecCCceeeeEeeccccc-c-eEeecCccccceEECCCCCEEEEEEcCCCCc
Confidence            23445555677899996    566665554 444445443322211 1 22233455678899999999875543   33


Q ss_pred             eEEEEEECC
Q psy2762         291 SVSLWKENT  299 (318)
Q Consensus       291 ~v~iW~~~~  299 (318)
                      .+.+++++.
T Consensus       239 ~l~~~~~dg  247 (269)
T d2hqsa1         239 VLNLVSTDG  247 (269)
T ss_dssp             EEEEEETTS
T ss_pred             EEEEEECCC
Confidence            566666543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=2.5e-06  Score=70.09  Aligned_cols=219  Identities=11%  Similarity=0.056  Sum_probs=121.5

Q ss_pred             CcceeeeeeecCCCCEEEEeeCC-Cc--EEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC
Q psy2762          12 HEDMIHDAEMDYLGLYLATCSSD-HT--VKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY   88 (318)
Q Consensus        12 H~~~v~~~~~~~~g~~l~s~s~D-~~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~   88 (318)
                      +...+...+|||||++||-.... +.  +.+.+...            .....+..+.+......|++  +|+.++..+.
T Consensus        37 ~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~sp--dg~~i~~~~~  102 (269)
T d2hqsa1          37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN------------GAVRQVASFPRHNGAPAFSP--DGSKLAFALS  102 (269)
T ss_dssp             ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT------------CCEEEEECCSSCEEEEEECT--TSSEEEEEEC
T ss_pred             CCCceeeeEECCCCCEEEEEEeeccCcceeeeeccc------------CceeEEeeeecccccceecC--CCCeeeEeee
Confidence            35566789999999999865433 33  44444331            12344556778888899974  4777776554


Q ss_pred             C-CeEEEE--eCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeeccccccccee
Q psy2762          89 D-RKVIIW--RGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAV  165 (318)
Q Consensus        89 D-g~v~vW--d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~  165 (318)
                      . +...++  ......  .. .............++++. ..++.+...++...+|.......  ....+..+.......
T Consensus       103 ~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~i~~~~~~~~--~~~~~~~~~~~~~~~  176 (269)
T d2hqsa1         103 KTGSLNLYVMDLASGQ--IR-QVTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGG--APQRITWEGSQNQDA  176 (269)
T ss_dssp             TTSSCEEEEEETTTCC--EE-ECCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS--CCEECCCSSSEEEEE
T ss_pred             cCCccceeeccccccc--ce-eeeecccccccccccccc-ccceecccccCCceEeeeecccc--cceeeeccccccccc
Confidence            3 322222  222222  11 122234444555666664 34555556666666665433322  122233334445566


Q ss_pred             eeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEE--EccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEE
Q psy2762         166 SWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIW--KQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASC  242 (318)
Q Consensus       166 ~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iw--d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~  242 (318)
                      .|+|+.                 ..++.. ...+...+|  +...+..    ....+........|||+    |+.|+-.
T Consensus       177 ~~spdg-----------------~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~p~~SPD----G~~i~f~  231 (269)
T d2hqsa1         177 DVSSDG-----------------KFMVMVSSNGGQQHIAKQDLATGGV----QVLSSTFLDETPSLAPN----GTMVIYS  231 (269)
T ss_dssp             EECTTS-----------------SEEEEEEECSSCEEEEEEETTTCCE----EECCCSSSCEEEEECTT----SSEEEEE
T ss_pred             cccccc-----------------ceeEEEeecCCceeeeEeecccccc----eEeecCccccceEECCC----CCEEEEE
Confidence            788873                 444444 444445555  4444332    12234455678899996    7777654


Q ss_pred             eC---CCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcC
Q psy2762         243 SQ---DRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSL  278 (318)
Q Consensus       243 s~---D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~sp  278 (318)
                      +.   ...|.++++.+..   ...+......+...+|||
T Consensus       232 s~~~~~~~l~~~~~dg~~---~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         232 SSQGMGSVLNLVSTDGRF---KARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EEETTEEEEEEEETTSCC---EEECCCSSSEEEEEEECC
T ss_pred             EcCCCCcEEEEEECCCCC---EEEEeCCCCcEEeEEeCC
Confidence            43   3467888887643   334555566788889998

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.72  E-value=7.2e-06  Score=67.48  Aligned_cols=238  Identities=11%  Similarity=0.057  Sum_probs=134.8

Q ss_pred             cceeeeeeecCCCCEEEE-eeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCe
Q psy2762          13 EDMIHDAEMDYLGLYLAT-CSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRK   91 (318)
Q Consensus        13 ~~~v~~~~~~~~g~~l~s-~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~   91 (318)
                      .-.-+.++++++|++.++ .+..+.+..++...          .........+. .....+++++  ++.++++....+.
T Consensus        13 ~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~----------~~~~~~~~~~~-~~p~gvav~~--~g~i~v~d~~~~~   79 (260)
T d1rwia_          13 RLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGS----------TGTTVLPFNGL-YQPQGLAVDG--AGTVYVTDFNNRV   79 (260)
T ss_dssp             CCCEEEEEECTTCCEEEEECSSSCEEEEEC--------------CEEECCCCSC-CSCCCEEECT--TCCEEEEETTTEE
T ss_pred             cCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCC----------ceEEEeccCCc-cCceEEEEcC--CCCEEEeeeeece
Confidence            344578999999996665 45557777776542          12222222222 2345677753  4777777666666


Q ss_pred             EEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCC
Q psy2762          92 VIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGI  171 (318)
Q Consensus        92 v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  171 (318)
                      +++++..+..  ...... ......++++.++  +.++++-..+..+..++.  .......... .-......+++.|+ 
T Consensus        80 i~~~~~~~~~--~~~~~~-~~~~p~~iavd~~--g~i~v~d~~~~~~~~~~~--~~~~~~~~~~-~~~~~p~~i~~~~~-  150 (260)
T d1rwia_          80 VTLAAGSNNQ--TVLPFD-GLNYPEGLAVDTQ--GAVYVADRGNNRVVKLAA--GSKTQTVLPF-TGLNDPDGVAVDNS-  150 (260)
T ss_dssp             EEECTTCSCC--EECCCC-SCCSEEEEEECTT--CCEEEEEGGGTEEEEECT--TCSSCEECCC-CSCCSCCEEEECTT-
T ss_pred             eeeeeeccce--eeeeee-eeeeccccccccc--ceeEeecccccccccccc--ccceeeeeee-cccCCcceeeecCC-
Confidence            6666544433  222222 2345788999987  556666555555544432  2111001111 11122345666664 


Q ss_pred             CCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEE
Q psy2762         172 GSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIW  251 (318)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw  251 (318)
                                      +..+++...++.|..++.+..... .. ..........|++.++    +.++++....+.|..+
T Consensus       151 ----------------g~~~v~~~~~~~i~~~d~~~~~~~-~~-~~~~~~~p~gi~~d~~----g~l~vsd~~~~~i~~~  208 (260)
T d1rwia_         151 ----------------GNVYVTDTDNNRVVKLEAESNNQV-VL-PFTDITAPWGIAVDEA----GTVYVTEHNTNQVVKL  208 (260)
T ss_dssp             ----------------CCEEEEEGGGTEEEEECTTTCCEE-EC-CCSSCCSEEEEEECTT----CCEEEEETTTTEEEEE
T ss_pred             ----------------CCEeeeccccccccccccccceee-ee-eccccCCCccceeeee----eeeeeeecCCCEEEEE
Confidence                            356677777788999987765321 11 1233445688999985    6778877778888888


Q ss_pred             EcCCCcceeeEEe-eecCCcEEEEEEcCCCCEEEEEeCCCeEEEEEECC
Q psy2762         252 TSNDYVTWTPFIM-NTFDDVVWNVSWSLTGDILTVSCGDNSVSLWKENT  299 (318)
Q Consensus       252 ~~~~~~~~~~~~~-~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW~~~~  299 (318)
                      +......   ... ...-.....++++++|+++++-..++.  |+.+++
T Consensus       209 ~~~~~~~---~~~~~~~~~~P~~i~~d~~g~l~vad~~~~r--I~~i~~  252 (260)
T d1rwia_         209 LAGSTTS---TVLPFTGLNTPLAVAVDSDRTVYVADRGNDR--VVKLTS  252 (260)
T ss_dssp             CTTCSCC---EECCCCSCCCEEEEEECTTCCEEEEEGGGTE--EEEECC
T ss_pred             eCCCCeE---EEEccCCCCCeEEEEEeCCCCEEEEECCCCE--EEEEeC
Confidence            7655431   111 111235679999999998776555664  444444

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.68  E-value=6.3e-05  Score=63.54  Aligned_cols=260  Identities=9%  Similarity=0.041  Sum_probs=142.7

Q ss_pred             ceeecCCCcceeeeeeecCCCCEEEEeeC-------CCcEEEEEcCCCcCCCCCCCCcceEEEEec----ccccCeEEEE
Q psy2762           5 LNLVDTGHEDMIHDAEMDYLGLYLATCSS-------DHTVKVFNLDRNLKKDDSHSQKGTLIAELK----GHSGPVWQVA   73 (318)
Q Consensus         5 ~~~~~~gH~~~v~~~~~~~~g~~l~s~s~-------D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~v~   73 (318)
                      +.++..+.. ....++|.++|+++++...       +++|..||.+.           +.......    ...+.-..+.
T Consensus        10 ~~~v~~~~~-g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~-----------~~~~~~~~~~~~~~~g~P~Gl~   77 (314)
T d1pjxa_          10 FTKVTEDIP-GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-----------GKKTVICKPEVNGYGGIPAGCQ   77 (314)
T ss_dssp             CEEEECCCT-TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-----------CCEEEEECCEETTEECCEEEEE
T ss_pred             eEEeecCCC-CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCC-----------CcEEEEECCccccCCCcceeEE
Confidence            334444433 3577899999998776432       45677777652           22211111    1223346788


Q ss_pred             ecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEec--CCC-cCeEEEEeeCCCCCcEEEEeecC-------------Ce
Q psy2762          74 WAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYN--NHD-SSVNSIAWAPKEFGLILACGSSD-------------GT  137 (318)
Q Consensus        74 ~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~--~h~-~~v~~v~~~p~~~~~~lasgs~d-------------~~  137 (318)
                      |.+  ++++|+.+.....|...+..... .......  +.. ...+.+++.|+  +.+.++-...             ..
T Consensus        78 ~~~--dg~~l~vad~~~~i~~~~~~g~~-~~~~~~~~~g~~~~~pndl~~d~~--G~lyvtd~~~~~~~~~~~~~~~~~~  152 (314)
T d1pjxa_          78 CDR--DANQLFVADMRLGLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKF  152 (314)
T ss_dssp             ECS--SSSEEEEEETTTEEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred             EeC--CCCEEEEEECCCeEEEEeCCCcE-EEEEeccccccccCCCcEEEECCC--CCEEEecCccCcccccccceeccCC
Confidence            863  57888888777778888876543 1211111  111 13578899887  5555553211             01


Q ss_pred             EEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC-eEEE---E
Q psy2762         138 ISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD-KWIE---E  213 (318)
Q Consensus       138 i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~-~~~~---~  213 (318)
                      =++|.+..+-   ....+.......+.++|+|+...            .....+++-+..+.|..|++... ....   .
T Consensus       153 G~v~~~~~dg---~~~~~~~~~~~pNGi~~~~d~d~------------~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~  217 (314)
T d1pjxa_         153 GSIYCFTTDG---QMIQVDTAFQFPNGIAVRHMNDG------------RPYQLIVAETPTKKLWSYDIKGPAKIENKKVW  217 (314)
T ss_dssp             EEEEEECTTS---CEEEEEEEESSEEEEEEEECTTS------------CEEEEEEEETTTTEEEEEEEEETTEEEEEEEE
T ss_pred             ceEEEEeecC---ceeEeeCCcceeeeeEECCCCCc------------ceeEEEEEeecccceEEeeccCccccceeeEE
Confidence            1334332211   11122222222346677664210            00124556677888988886533 2211   1


Q ss_pred             EEcccC-CCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEcCCCCEE-EEEeCCCe
Q psy2762         214 TKLENH-SDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWSLTGDIL-TVSCGDNS  291 (318)
Q Consensus       214 ~~~~~h-~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~spdg~~l-~s~~~D~~  291 (318)
                      ..+.+. ......+++..+    |.+.++....+.|.+|+.+....  ...+......+.+++|.||++.| ++.+..+.
T Consensus       218 ~~~~~~~~~~pdGiavD~~----GnlyVa~~~~g~I~~~dp~~g~~--~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~  291 (314)
T d1pjxa_         218 GHIPGTHEGGADGMDFDED----NNLLVANWGSSHIEVFGPDGGQP--KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA  291 (314)
T ss_dssp             EECCCCSSCEEEEEEEBTT----CCEEEEEETTTEEEEECTTCBSC--SEEEECSSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred             EEccccccccceeeEEecC----CcEEEEEcCCCEEEEEeCCCCEE--EEEEECCCCCEEEEEEeCCCCEEEEEECCCCc
Confidence            222222 223457888875    77777777788999998775432  12222334568899999999754 55566777


Q ss_pred             EEEEEECCCCc
Q psy2762         292 VSLWKENTDGA  302 (318)
Q Consensus       292 v~iW~~~~~~~  302 (318)
                      |.-.++...|+
T Consensus       292 i~~~~~~~~G~  302 (314)
T d1pjxa_         292 VWKFEWQRNGK  302 (314)
T ss_dssp             EEEEECSSCBC
T ss_pred             EEEEECCCCCh
Confidence            77666666664

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.59  E-value=7.3e-05  Score=64.50  Aligned_cols=221  Identities=9%  Similarity=0.015  Sum_probs=119.0

Q ss_pred             cccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCc-EEEEEEecCCCcCeEEEEeeCCCCCcEEEEee-cCCeEEEEE
Q psy2762          65 HSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGN-WFKYYEYNNHDSSVNSIAWAPKEFGLILACGS-SDGTISFLT  142 (318)
Q Consensus        65 h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs-~d~~i~i~~  142 (318)
                      ....+..++|++  ++++|.++.. +.+..|.+.... ........ .......++++|+....++++.. ..++|..+.
T Consensus        38 ~~~~~s~la~s~--d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~  113 (365)
T d1jofa_          38 QDEPISWMTFDH--ERKNIYGAAM-KKWSSFAVKSPTEIVHEASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANP  113 (365)
T ss_dssp             TTCCCSEEEECT--TSSEEEEEEB-TEEEEEEEEETTEEEEEEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred             CCCCCCEEEEcC--CCCEEEEEeC-CcEEEEEEeCCCCeEEEeeec-CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeE
Confidence            344455688864  5888887765 567777665432 22221111 22345567888874322444432 234555444


Q ss_pred             eecCCCCcceeee--------------cccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccC
Q psy2762         143 YMSDTNSWESRKI--------------AAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEG  207 (318)
Q Consensus       143 ~~~~~~~~~~~~~--------------~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~  207 (318)
                      +...........+              ......+..+.|+|+                 +++++++ .....|.+|+...
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPd-----------------G~~l~v~d~g~d~v~~~~~~~  176 (365)
T d1jofa_         114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT-----------------ETYLYSADLTANKLWTHRKLA  176 (365)
T ss_dssp             ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT-----------------SSEEEEEETTTTEEEEEEECT
T ss_pred             ccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCC-----------------CCEEEEeeCCCCEEEEEEccC
Confidence            3221110000000              001112457888887                 3554444 4455788887543


Q ss_pred             -CeEEEEE--EcccCCCCeeEEEEccCCCCCccEE-EEEeCCCeEEEEEcCCCcceeeEEee-----------------e
Q psy2762         208 -DKWIEET--KLENHSDWVRDVAWAPSWGLSKCMI-ASCSQDRKVIIWTSNDYVTWTPFIMN-----------------T  266 (318)
Q Consensus       208 -~~~~~~~--~~~~h~~~V~~v~~sp~~~~~~~~l-~s~s~D~~i~vw~~~~~~~~~~~~~~-----------------~  266 (318)
                       +......  .........+.+.|+|+    +.++ ++.-.+++|.+|+.............                 .
T Consensus       177 ~g~~~~~~~~~~~~~g~gPr~i~f~pd----g~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (365)
T d1jofa_         177 SGEVELVGSVDAPDPGDHPRWVAMHPT----GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK  252 (365)
T ss_dssp             TSCEEEEEEEECSSTTCCEEEEEECTT----SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred             CCceeeccceeecCCCCceEEEEECCC----CceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccccccccccccc
Confidence             2222222  22233456789999997    5555 55556899999998654311111100                 0


Q ss_pred             cCCcEEEEEEcCCCCEEEEEeC-CC-----eEEEEEECCCCceEEEeeec
Q psy2762         267 FDDVVWNVSWSLTGDILTVSCG-DN-----SVSLWKENTDGAWQCITEMG  310 (318)
Q Consensus       267 ~~~~v~~v~~spdg~~l~s~~~-D~-----~v~iW~~~~~~~~~~~~~~~  310 (318)
                      .......+.++|||++|+++.+ +.     .+.+|+++..+.......+.
T Consensus       253 ~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~  302 (365)
T d1jofa_         253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS  302 (365)
T ss_dssp             BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE
T ss_pred             ccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEee
Confidence            1123567899999999988753 22     38888888777665444433

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.53  E-value=0.00018  Score=60.71  Aligned_cols=235  Identities=9%  Similarity=0.036  Sum_probs=132.5

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECC----C
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYD----R   90 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~D----g   90 (318)
                      .+..++|+++|++.++-...+.|..|+.+.           ......+.........+++.+  +|+++++...+    +
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g-----------~~~~~~~~~~~~~p~gla~~~--dG~l~va~~~~~~~~~  107 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPET-----------KEIKRPFVSHKANPAAIKIHK--DGRLFVCYLGDFKSTG  107 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTT-----------CCEEEEEECSSSSEEEEEECT--TSCEEEEECTTSSSCC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCC-----------CeEEEEEeCCCCCeeEEEECC--CCCEEEEecCCCccce
Confidence            457899999999888877888888887652           223333444556678899853  58877665432    2


Q ss_pred             eEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeecccccccceee
Q psy2762          91 KVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGCNAVS  166 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~  166 (318)
                      .+...+...........-..-....+.+++.|+  +.+.++....    ..-.++.+..+..  ....+...-...+.++
T Consensus       108 ~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~--G~l~vtd~~~~~~~~~g~v~~~~~dg~--~~~~~~~~~~~pnGia  183 (319)
T d2dg1a1         108 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK--GGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPIIQNISVANGIA  183 (319)
T ss_dssp             EEEEECTTSCSCEEEECSSSSCCCEEEEEECTT--SCEEEEECCCBTTBCCEEEEEECTTSC--CEEEEEEEESSEEEEE
T ss_pred             eEEEEcCCCceeeeeccCCCcccCCcceeEEec--cceeecccccccccCcceeEEEecccc--eeEEEeeccceeeeee
Confidence            344444444332222111112335788999988  5555543221    1112333322221  1222222222346788


Q ss_pred             eCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC--e--EEE---EEEcccCCCCeeEEEEccCCCCCccEE
Q psy2762         167 WGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD--K--WIE---ETKLENHSDWVRDVAWAPSWGLSKCMI  239 (318)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~--~--~~~---~~~~~~h~~~V~~v~~sp~~~~~~~~l  239 (318)
                      |+|+.                ...+++-+..+.|+.|+++..  .  ...   .....+. .....+++.++    |.+.
T Consensus       184 ~s~dg----------------~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~-~~PdGl~vD~~----G~l~  242 (319)
T d2dg1a1         184 LSTDE----------------KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSD----DNLY  242 (319)
T ss_dssp             ECTTS----------------SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTT----CCEE
T ss_pred             ecccc----------------ceEEEecccCCceEEEEEcCCCceeccccceeeeccCCc-cceeeeeEcCC----CCEE
Confidence            99863                124466677889999987532  1  100   1111112 22456888885    7788


Q ss_pred             EEEeCCCeEEEEEcCCCcceeeEEee----ecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         240 ASCSQDRKVIIWTSNDYVTWTPFIMN----TFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       240 ~s~s~D~~i~vw~~~~~~~~~~~~~~----~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      ++....+.|.+++......... .++    ++...+.+++|.|++..|..+..
T Consensus       243 Va~~~~g~V~~~~p~G~~l~~i-~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         243 VAMYGQGRVLVFNKRGYPIGQI-LIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEEETTTEEEEECTTSCEEEEE-ECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             EEEcCCCEEEEECCCCcEEEEE-eCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            8888899999999765321111 111    12235779999998877766653

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.02  E-value=0.0016  Score=54.51  Aligned_cols=198  Identities=13%  Similarity=0.119  Sum_probs=109.3

Q ss_pred             eeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEec-ccc----cCeEEEEecCCCCCcEEEEEEC---
Q psy2762          17 HDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELK-GHS----GPVWQVAWAHPQFGTLLASCSY---   88 (318)
Q Consensus        17 ~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~h~----~~V~~v~~~~~~~~~~las~s~---   88 (318)
                      ..++|+++|++|+.+...+.|...+.+..            ....+. ...    ...+.+.+.+  +|.+.++-..   
T Consensus        74 ~Gl~~~~dg~~l~vad~~~~i~~~~~~g~------------~~~~~~~~~~g~~~~~pndl~~d~--~G~lyvtd~~~~~  139 (314)
T d1pjxa_          74 AGCQCDRDANQLFVADMRLGLLVVQTDGT------------FEEIAKKDSEGRRMQGCNDCAFDY--EGNLWITAPAGEV  139 (314)
T ss_dssp             EEEEECSSSSEEEEEETTTEEEEEETTSC------------EEECCSBCTTSCBCBCCCEEEECT--TSCEEEEECBCBC
T ss_pred             eeEEEeCCCCEEEEEECCCeEEEEeCCCc------------EEEEEeccccccccCCCcEEEECC--CCCEEEecCccCc
Confidence            46889999998887777777888887521            111111 111    1245677753  4777666322   


Q ss_pred             ------------CCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCC---cEEEEeecCCeEEEEEeecCCCCccee
Q psy2762          89 ------------DRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFG---LILACGSSDGTISFLTYMSDTNSWESR  153 (318)
Q Consensus        89 ------------Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~---~~lasgs~d~~i~i~~~~~~~~~~~~~  153 (318)
                                  +|.|..++.. ++.....   ..-...+.++|+|+..+   .++++-+..+.|..+++..+.. ....
T Consensus       140 ~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~---~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~-~~~~  214 (314)
T d1pjxa_         140 APADYTRSMQEKFGSIYCFTTD-GQMIQVD---TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK-IENK  214 (314)
T ss_dssp             TTSCCCBTTSSSCEEEEEECTT-SCEEEEE---EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE-EEEE
T ss_pred             ccccccceeccCCceEEEEeec-CceeEee---CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccc-ccee
Confidence                        1233333332 2222211   11233578999987432   3566666777787777643321 1111


Q ss_pred             eecc-----cccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEE
Q psy2762         154 KIAA-----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAW  228 (318)
Q Consensus       154 ~~~~-----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~  228 (318)
                      ++..     +....-.+++.++                 ++..++....+.|++||.++++...  .+........+++|
T Consensus       215 ~~~~~~~~~~~~~pdGiavD~~-----------------GnlyVa~~~~g~I~~~dp~~g~~~~--~i~~p~~~~t~~af  275 (314)
T d1pjxa_         215 KVWGHIPGTHEGGADGMDFDED-----------------NNLLVANWGSSHIEVFGPDGGQPKM--RIRCPFEKPSNLHF  275 (314)
T ss_dssp             EEEEECCCCSSCEEEEEEEBTT-----------------CCEEEEEETTTEEEEECTTCBSCSE--EEECSSSCEEEEEE
T ss_pred             eEEEEccccccccceeeEEecC-----------------CcEEEEEcCCCEEEEEeCCCCEEEE--EEECCCCCEEEEEE
Confidence            1110     0001112333332                 4556666667889999988765332  23344466889999


Q ss_pred             ccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         229 APSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       229 sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      .|+   ..+++++.+..+.|...+...
T Consensus       276 g~d---~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         276 KPQ---TKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CTT---SSEEEEEETTTTEEEEEECSS
T ss_pred             eCC---CCEEEEEECCCCcEEEEECCC
Confidence            996   235778888888887777644

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.87  E-value=0.00082  Score=54.59  Aligned_cols=195  Identities=9%  Similarity=-0.000  Sum_probs=111.9

Q ss_pred             eeeeeeecCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVII   94 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~v   94 (318)
                      ..+.++++++|+++++....+.+++++-.           ....+.... ......++++.+  +++++++-.....+..
T Consensus        58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~-----------~~~~~~~~~-~~~~p~~iavd~--~g~i~v~d~~~~~~~~  123 (260)
T d1rwia_          58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGS-----------NNQTVLPFD-GLNYPEGLAVDT--QGAVYVADRGNNRVVK  123 (260)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTC-----------SCCEECCCC-SCCSEEEEEECT--TCCEEEEEGGGTEEEE
T ss_pred             CceEEEEcCCCCEEEeeeeeceeeeeeec-----------cceeeeeee-eeeecccccccc--cceeEeeccccccccc
Confidence            45678899999988887777766665432           112222222 234567888753  4777776666666777


Q ss_pred             EeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCC
Q psy2762          95 WRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSL  174 (318)
Q Consensus        95 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~  174 (318)
                      ++...... ......+ -.....+++.|+  +.++++...++.|..++.....   ..............+++.++    
T Consensus       124 ~~~~~~~~-~~~~~~~-~~~p~~i~~~~~--g~~~v~~~~~~~i~~~d~~~~~---~~~~~~~~~~~p~gi~~d~~----  192 (260)
T d1rwia_         124 LAAGSKTQ-TVLPFTG-LNDPDGVAVDNS--GNVYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEA----  192 (260)
T ss_dssp             ECTTCSSC-EECCCCS-CCSCCEEEECTT--CCEEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTT----
T ss_pred             ccccccee-eeeeecc-cCCcceeeecCC--CCEeeeccccccccccccccce---eeeeeccccCCCccceeeee----
Confidence            76554321 1111111 234578899987  5677777777777776542111   11111122223355666664    


Q ss_pred             ccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEc
Q psy2762         175 SELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTS  253 (318)
Q Consensus       175 ~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~  253 (318)
                                   ++.+++....+.|..++...... ... ....-.....|+++++    +.++++-..++.|+..+.
T Consensus       193 -------------g~l~vsd~~~~~i~~~~~~~~~~-~~~-~~~~~~~P~~i~~d~~----g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         193 -------------GTVYVTEHNTNQVVKLLAGSTTS-TVL-PFTGLNTPLAVAVDSD----RTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             -------------CCEEEEETTTTEEEEECTTCSCC-EEC-CCCSCCCEEEEEECTT----CCEEEEEGGGTEEEEECC
T ss_pred             -------------eeeeeeecCCCEEEEEeCCCCeE-EEE-ccCCCCCeEEEEEeCC----CCEEEEECCCCEEEEEeC
Confidence                         45677777778888887654421 111 1222244678999885    667776666676666544

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.62  E-value=0.013  Score=48.76  Aligned_cols=200  Identities=9%  Similarity=0.066  Sum_probs=111.7

Q ss_pred             ccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC--CeEEEEEe
Q psy2762          66 SGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD--GTISFLTY  143 (318)
Q Consensus        66 ~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d--~~i~i~~~  143 (318)
                      .-....++|.+  +|+++++-...+.|.-|+..++.....  +.........+++.|+  +.++++...+  ....++.+
T Consensus        39 ~~~lEG~~~D~--~G~Ly~~D~~~g~I~ri~p~g~~~~~~--~~~~~~~p~gla~~~d--G~l~va~~~~~~~~~~i~~~  112 (319)
T d2dg1a1          39 GLQLEGLNFDR--QGQLFLLDVFEGNIFKINPETKEIKRP--FVSHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAA  112 (319)
T ss_dssp             CCCEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEE--EECSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEE
T ss_pred             CcCcEeCEECC--CCCEEEEECCCCEEEEEECCCCeEEEE--EeCCCCCeeEEEECCC--CCEEEEecCCCccceeEEEE
Confidence            33456789963  588777777889999898876643222  2234456789999998  6666665432  23334433


Q ss_pred             ecCCCCcceeeeccc---ccccceeeeCCCCCCCccccccCCCCCCccceEEEecC------CCeEEEEEccCCeEEEEE
Q psy2762         144 MSDTNSWESRKIAAH---TIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGC------DNLIKIWKQEGDKWIEET  214 (318)
Q Consensus       144 ~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~------d~~i~iwd~~~~~~~~~~  214 (318)
                      ......  ......+   ....+.+.+.|+                 +...++-..      .+.+..++.+.+......
T Consensus       113 ~~~~~~--~~~~~~~~~~~~~~nd~~~d~~-----------------G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~  173 (319)
T d2dg1a1         113 TENGDN--LQDIIEDLSTAYCIDDMVFDSK-----------------GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII  173 (319)
T ss_dssp             CTTSCS--CEEEECSSSSCCCEEEEEECTT-----------------SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE
T ss_pred             cCCCce--eeeeccCCCcccCCcceeEEec-----------------cceeecccccccccCcceeEEEecccceeEEEe
Confidence            222211  1111111   123455666665                 233333211      123444444443322111


Q ss_pred             EcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce-ee---EEeeec--CCcEEEEEEcCCCCEEEEEeC
Q psy2762         215 KLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW-TP---FIMNTF--DDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       215 ~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~-~~---~~~~~~--~~~v~~v~~spdg~~l~s~~~  288 (318)
                         ..-...+.|+|+|+   ...+.++-+..+.|..|++...... ..   ......  ....-.+++.++|++.++...
T Consensus       174 ---~~~~~pnGia~s~d---g~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~  247 (319)
T d2dg1a1         174 ---QNISVANGIALSTD---EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG  247 (319)
T ss_dssp             ---EEESSEEEEEECTT---SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET
T ss_pred             ---eccceeeeeeeccc---cceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcC
Confidence               11223578999997   2345566677889999987653211 11   011111  123567999999998888888


Q ss_pred             CCeEEEEE
Q psy2762         289 DNSVSLWK  296 (318)
Q Consensus       289 D~~v~iW~  296 (318)
                      .+.|++++
T Consensus       248 ~g~V~~~~  255 (319)
T d2dg1a1         248 QGRVLVFN  255 (319)
T ss_dssp             TTEEEEEC
T ss_pred             CCEEEEEC
Confidence            89998887

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.45  E-value=0.017  Score=46.03  Aligned_cols=96  Identities=11%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             eeecCC--CCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEEC-C---C--
Q psy2762          19 AEMDYL--GLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSY-D---R--   90 (318)
Q Consensus        19 ~~~~~~--g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~-D---g--   90 (318)
                      +.++|+  |++++-.+ ++.|-+.|++.           ++ ...|..+.+.+....|++  ||+.||-... +   .  
T Consensus         4 ~~~sPdi~G~~v~f~~-~~dl~~~d~~~-----------g~-~~~Lt~~~~~~~~p~~SP--DG~~iaf~~~~~~~~~~~   68 (281)
T d1k32a2           4 LLLNPDIHGDRIIFVC-CDDLWEHDLKS-----------GS-TRKIVSNLGVINNARFFP--DGRKIAIRVMRGSSLNTA   68 (281)
T ss_dssp             CCEEEEEETTEEEEEE-TTEEEEEETTT-----------CC-EEEEECSSSEEEEEEECT--TSSEEEEEEEESTTCCEE
T ss_pred             cccCCCCCCCEEEEEe-CCcEEEEECCC-----------CC-EEEEecCCCcccCEEECC--CCCEEEEEEeeCCCCCce
Confidence            346899  99988765 45666667752           22 345666778889999984  5898886543 2   2  


Q ss_pred             eEEEEeCCCCcEEEEEEe----cCCCcCeEEEEeeCCCCCcEEEE
Q psy2762          91 KVIIWRGDNGNWFKYYEY----NNHDSSVNSIAWAPKEFGLILAC  131 (318)
Q Consensus        91 ~v~vWd~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~~las  131 (318)
                      .|.+.+..++...++...    .........++|+|+  +..++.
T Consensus        69 ~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spd--g~~l~~  111 (281)
T d1k32a2          69 DLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPD--GNLIIS  111 (281)
T ss_dssp             EEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTT--CCEEEE
T ss_pred             EEEEEEecCCceEEeeecCCCccCccccccccccCCC--CCEEEE
Confidence            255556666643332111    011234567889998  455554

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.42  E-value=0.021  Score=46.34  Aligned_cols=167  Identities=15%  Similarity=0.143  Sum_probs=100.5

Q ss_pred             eEEEEec-ccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC
Q psy2762          57 TLIAELK-GHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD  135 (318)
Q Consensus        57 ~~~~~~~-~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d  135 (318)
                      .....+. ........++..  .++.++++....+.+.+++... +....+....+......+++.++  +.++++....
T Consensus       103 ~~~~~~~~~~~~~p~~~avd--~~G~i~v~~~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~~i~~d~~--g~i~v~d~~~  177 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVD--NKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDK--QEIFISDNRA  177 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEEC--TTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSS--SEEEEEEGGG
T ss_pred             cceeecCCCcccccceeccc--cCCcEEEEeeccceeeEeccCC-ceeecccccccccccceeeeccc--eeEEeeeccc
Confidence            3444442 334556677765  2477777777777788887654 33343333445667788888887  6677787888


Q ss_pred             CeEEEEEeecCCCCcceeeec--ccccccceeeeCCCCCCCccccccCCCCCCccceEEEe-cCCCeEEEEEccCCeEEE
Q psy2762         136 GTISFLTYMSDTNSWESRKIA--AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG-GCDNLIKIWKQEGDKWIE  212 (318)
Q Consensus       136 ~~i~i~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg-s~d~~i~iwd~~~~~~~~  212 (318)
                      +.|.+++.. +.   .+..+.  +.......+++.|+                 ++.+++- ..++.|++|+.+ +++..
T Consensus       178 ~~V~~~d~~-G~---~~~~~g~~g~~~~P~giavD~~-----------------G~i~Vad~~~~~~v~~f~~~-G~~~~  235 (279)
T d1q7fa_         178 HCVKVFNYE-GQ---YLRQIGGEGITNYPIGVGINSN-----------------GEILIADNHNNFNLTIFTQD-GQLIS  235 (279)
T ss_dssp             TEEEEEETT-CC---EEEEESCTTTSCSEEEEEECTT-----------------CCEEEEECSSSCEEEEECTT-SCEEE
T ss_pred             cceeeeecC-Cc---eeeeecccccccCCcccccccC-----------------CeEEEEECCCCcEEEEECCC-CCEEE
Confidence            888888741 11   112221  22223345666664                 3445443 345579999865 44433


Q ss_pred             EEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCC
Q psy2762         213 ETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSND  255 (318)
Q Consensus       213 ~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~  255 (318)
                      .............|++.|+    |.+ +.++.+..|++|....
T Consensus       236 ~~~~~~~~~~p~~vav~~d----G~l-~V~~~n~~v~~fr~~~  273 (279)
T d1q7fa_         236 ALESKVKHAQCFDVALMDD----GSV-VLASKDYRLYIYRYVQ  273 (279)
T ss_dssp             EEEESSCCSCEEEEEEETT----TEE-EEEETTTEEEEEECSC
T ss_pred             EEeCCCCCCCEeEEEEeCC----CcE-EEEeCCCeEEEEEeee
Confidence            3322333345788999996    655 4456899999997654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.0037  Score=55.29  Aligned_cols=148  Identities=14%  Similarity=0.161  Sum_probs=79.9

Q ss_pred             EecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecC-CCcCeEEEEeeCCCCCcEEEEee---------cCCeEEEEE
Q psy2762          73 AWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNN-HDSSVNSIAWAPKEFGLILACGS---------SDGTISFLT  142 (318)
Q Consensus        73 ~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~lasgs---------~d~~i~i~~  142 (318)
                      .|.+  ++.++. -..||.|.+||+.++.......... ....+....|+||  +..++...         ..+.+.++|
T Consensus        23 ~W~~--~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD--~~~vl~~~~~~~~~r~s~~~~~~i~d   97 (465)
T d1xfda1          23 KWIS--DTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSK   97 (465)
T ss_dssp             CBSS--SSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred             EEeC--CCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCC--CCeEEEEEcccceeEeeccccEEEEE
Confidence            5653  345443 3567889999998765333222111 2235677889999  44444432         245667777


Q ss_pred             eecCCCCcceeeec---ccccccceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEcccC
Q psy2762         143 YMSDTNSWESRKIA---AHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLENH  219 (318)
Q Consensus       143 ~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h  219 (318)
                      +..+.    ...+.   .....+....|||+                 ++.||-.. ++.|.+.+..++...+.. ..+-
T Consensus        98 ~~~~~----~~~l~~~~~~~~~l~~~~wSPD-----------------G~~iafv~-~~nl~~~~~~~~~~~~lt-~~g~  154 (465)
T d1xfda1          98 IPHGD----PQSLDPPEVSNAKLQYAGWGPK-----------------GQQLIFIF-ENNIYYCAHVGKQAIRVV-STGK  154 (465)
T ss_dssp             SSSCC----CEECCCTTCCSCCCSBCCBCSS-----------------TTCEEEEE-TTEEEEESSSSSCCEEEE-CCCB
T ss_pred             ccCCc----eeeccCccCCccccceeeeccC-----------------CceEEEEe-cceEEEEecCCCceEEEe-cccC
Confidence            64433    12222   22334556789997                 34555443 456777766554332222 1221


Q ss_pred             CCCe-----------------eEEEEccCCCCCccEEEEEeC-CCeEEEEE
Q psy2762         220 SDWV-----------------RDVAWAPSWGLSKCMIASCSQ-DRKVIIWT  252 (318)
Q Consensus       220 ~~~V-----------------~~v~~sp~~~~~~~~l~s~s~-D~~i~vw~  252 (318)
                      ...|                 ..+-|||+    |++||.... +..+..+.
T Consensus       155 ~~~i~nG~~d~vyeee~~~~~~a~~WSPD----gk~iaf~~~D~s~V~~~~  201 (465)
T d1xfda1         155 EGVIYNGLSDWLYEEEILKTHIAHWWSPD----GTRLAYAAINDSRVPIME  201 (465)
T ss_dssp             TTTEEEEECCHHHHHTTSSSSEEEEECTT----SSEEEEEEEECTTSCEEE
T ss_pred             cceeeccccchhhhhhhccccceEEECCC----CCeEEEEEecccccceee
Confidence            1111                 46779996    777877654 34344443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00097  Score=59.23  Aligned_cols=152  Identities=13%  Similarity=0.135  Sum_probs=86.5

Q ss_pred             EEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecc---cccccceeeeCCCCCCCccccccCCCCCCccceEEEe
Q psy2762         118 IAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAA---HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSG  194 (318)
Q Consensus       118 v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasg  194 (318)
                      +.|.+++  .++ .-..+|.|.+++...+...   ..+..   ....+....|||+.                 ++++..
T Consensus        22 ~~W~~~~--~~~-~~~~~g~i~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~SpD~-----------------~~vl~~   78 (465)
T d1xfda1          22 AKWISDT--EFI-YREQKGTVRLWNVETNTST---VLIEGKKIESLRAIRYEISPDR-----------------EYALFS   78 (465)
T ss_dssp             CCBSSSS--CBC-CCCSSSCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEECTTS-----------------SEEEEE
T ss_pred             CEEeCCC--cEE-EEeCCCcEEEEECCCCCEE---EEEcCccccccccceeEECCCC-----------------CeEEEE
Confidence            3577763  333 2355677888876544321   11111   22345667789873                 444433


Q ss_pred             ---------cCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeE---
Q psy2762         195 ---------GCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPF---  262 (318)
Q Consensus       195 ---------s~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~---  262 (318)
                               +..+.+.|+|+.+++..++.........+....|||+    |..||-+. ++.|.+.+.......+..   
T Consensus        79 ~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPD----G~~iafv~-~~nl~~~~~~~~~~~~lt~~g  153 (465)
T d1xfda1          79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPK----GQQLIFIF-ENNIYYCAHVGKQAIRVVSTG  153 (465)
T ss_dssp             ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSS----TTCEEEEE-TTEEEEESSSSSCCEEEECCC
T ss_pred             EcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccC----CceEEEEe-cceEEEEecCCCceEEEeccc
Confidence                     3456788999988765444333334445666889997    77777664 677887776553321110   


Q ss_pred             ----EeeecCC---------cEEEEEEcCCCCEEEEEeC-CCeEEEEEE
Q psy2762         263 ----IMNTFDD---------VVWNVSWSLTGDILTVSCG-DNSVSLWKE  297 (318)
Q Consensus       263 ----~~~~~~~---------~v~~v~~spdg~~l~s~~~-D~~v~iW~~  297 (318)
                          ...+..+         .-..+-|||||++||.... +..|..+.+
T Consensus       154 ~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~  202 (465)
T d1xfda1         154 KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL  202 (465)
T ss_dssp             BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred             CcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeec
Confidence                1111111         1146779999999998753 445666654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.12  E-value=0.028  Score=47.43  Aligned_cols=115  Identities=12%  Similarity=0.053  Sum_probs=65.3

Q ss_pred             eeeeeeecCCCCEEEEeeCCC-----------cEEEEEcCCCcCCCCCCCCcceEEEE-ecccccCeEEEEecCCCCCcE
Q psy2762          15 MIHDAEMDYLGLYLATCSSDH-----------TVKVFNLDRNLKKDDSHSQKGTLIAE-LKGHSGPVWQVAWAHPQFGTL   82 (318)
Q Consensus        15 ~v~~~~~~~~g~~l~s~s~D~-----------~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~v~~~~~~~~~~   82 (318)
                      .+.......+|+.++.|+.+.           .+.+||....         ....... ...|...-....+..  ++.+
T Consensus        21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~---------~w~~~~~~~~~~~~~~~~~~~~~--~g~i   89 (387)
T d1k3ia3          21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTG---------IVSDRTVTVTKHDMFCPGISMDG--NGQI   89 (387)
T ss_dssp             CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTC---------CBCCCEEEECSCCCSSCEEEECT--TSCE
T ss_pred             ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCC---------cEeecCCCCCCcccceeEEEEec--CCcE
Confidence            334455667889888888532           2678988632         1211111 122322222334443  5888


Q ss_pred             EEEEECC-CeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecC------CeEEEEEe
Q psy2762          83 LASCSYD-RKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSD------GTISFLTY  143 (318)
Q Consensus        83 las~s~D-g~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d------~~i~i~~~  143 (318)
                      ++.|+.+ ..+.+||..+..+...-.+... ....+++..++  +.+++.|+.+      ..+.+||+
T Consensus        90 ~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-r~~~~~~~~~d--G~v~v~GG~~~~~~~~~~v~~yd~  154 (387)
T d1k3ia3          90 VVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSD--GRVFTIGGSWSGGVFEKNGEVYSP  154 (387)
T ss_dssp             EEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTT--SCEEEECCCCCSSSCCCCEEEEET
T ss_pred             EEeecCCCcceeEecCccCccccccccccc-ccccceeeecC--CceeeeccccccccccceeeeecC
Confidence            8888766 6899999988776543333221 12234555666  6777777653      24666665

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.01  E-value=0.062  Score=43.88  Aligned_cols=224  Identities=11%  Similarity=-0.039  Sum_probs=126.5

Q ss_pred             eeeeecC-CCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEE
Q psy2762          17 HDAEMDY-LGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIW   95 (318)
Q Consensus        17 ~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vW   95 (318)
                      ....|++ ++++..+=-..+.|.-||.+.           ++ ...+. ....+.++++..  ++.++++ +.+ -+.++
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~-----------g~-~~~~~-~~~~~~~i~~~~--dg~l~va-~~~-gl~~~   83 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLAS-----------GR-KTVHA-LPFMGSALAKIS--DSKQLIA-SDD-GLFLR   83 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTT-----------TE-EEEEE-CSSCEEEEEEEE--TTEEEEE-ETT-EEEEE
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCC-----------Ce-EEEEE-CCCCcEEEEEec--CCCEEEE-EeC-ccEEe
Confidence            4456765 455555544567888888752           22 22222 245677888753  4665554 554 57788


Q ss_pred             eCCCCcEEEEEEecC--CCcCeEEEEeeCCCCCcEEEEeecC----CeEEEEEeecCCCCcceeeecccccccceeeeCC
Q psy2762          96 RGDNGNWFKYYEYNN--HDSSVNSIAWAPKEFGLILACGSSD----GTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGP  169 (318)
Q Consensus        96 d~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~~lasgs~d----~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p  169 (318)
                      |..+++.........  ....++.+.+.|+  +.+.++....    +.-.+|.+..+    ....+.......+.++|+|
T Consensus        84 d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~--G~iw~~~~~~~~~~~~g~l~~~~~g----~~~~~~~~~~~~Ng~~~s~  157 (295)
T d2ghsa1          84 DTATGVLTLHAELESDLPGNRSNDGRMHPS--GALWIGTMGRKAETGAGSIYHVAKG----KVTKLFADISIPNSICFSP  157 (295)
T ss_dssp             ETTTCCEEEEECSSTTCTTEEEEEEEECTT--SCEEEEEEETTCCTTCEEEEEEETT----EEEEEEEEESSEEEEEECT
T ss_pred             ecccceeeEEeeeecCCCcccceeeEECCC--CCEEEEeccccccccceeEeeecCC----cEEEEeeccCCcceeeecC
Confidence            988876544433222  1235788888887  5444443221    12234444322    1222222222346778888


Q ss_pred             CCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCC------eEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEe
Q psy2762         170 GIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGD------KWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCS  243 (318)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~------~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s  243 (318)
                      +.                ...+++-+..+.|..++++..      +......+.+-......+++..+    |.+.++.-
T Consensus       158 d~----------------~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~----GnlWva~~  217 (295)
T d2ghsa1         158 DG----------------TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE----GHIWNARW  217 (295)
T ss_dssp             TS----------------CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT----SCEEEEEE
T ss_pred             CC----------------ceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCC----CCEEeeee
Confidence            63                234667777888998886432      11112233344455678888775    66776666


Q ss_pred             CCCeEEEEEcCCCcceeeEEeeecCCcEEEEEEc-CCCCEEEEE
Q psy2762         244 QDRKVIIWTSNDYVTWTPFIMNTFDDVVWNVSWS-LTGDILTVS  286 (318)
Q Consensus       244 ~D~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~s-pdg~~l~s~  286 (318)
                      ..+.|..|+.....   .....-....+.+++|- ||.+.|..+
T Consensus       218 ~~g~V~~~dp~G~~---~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         218 GEGAVDRYDTDGNH---IARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             TTTEEEEECTTCCE---EEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             CCCceEEecCCCcE---eeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            67889999876532   22222223468999996 677666544

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.77  E-value=0.78  Score=36.88  Aligned_cols=190  Identities=11%  Similarity=0.031  Sum_probs=106.8

Q ss_pred             EEEecCCCCCcEEEEEECCCeEEEEeCCCCcEEEEEEecCCCcCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCc
Q psy2762          71 QVAWAHPQFGTLLASCSYDRKVIIWRGDNGNWFKYYEYNNHDSSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSW  150 (318)
Q Consensus        71 ~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~  150 (318)
                      +..|.+ .++.++.+=-..+.|.-||+.++.. ..+.+   ...+.++++.++  +.++++ +.++ |.++|...+.   
T Consensus        22 gp~wd~-~~~~l~wvDi~~~~I~r~d~~~g~~-~~~~~---~~~~~~i~~~~d--g~l~va-~~~g-l~~~d~~tg~---   89 (295)
T d2ghsa1          22 GPTFDP-ASGTAWWFNILERELHELHLASGRK-TVHAL---PFMGSALAKISD--SKQLIA-SDDG-LFLRDTATGV---   89 (295)
T ss_dssp             EEEEET-TTTEEEEEEGGGTEEEEEETTTTEE-EEEEC---SSCEEEEEEEET--TEEEEE-ETTE-EEEEETTTCC---
T ss_pred             CCeEEC-CCCEEEEEECCCCEEEEEECCCCeE-EEEEC---CCCcEEEEEecC--CCEEEE-EeCc-cEEeecccce---
Confidence            345653 3456555544568899999887743 33333   456788998887  555554 4454 5666653322   


Q ss_pred             ceeeecc-----cccccceeeeCCCCCCCccccccCCCCCCccceEEE-ec---CCCeEEEEEccCCeEEEEEEcccCCC
Q psy2762         151 ESRKIAA-----HTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRLVS-GG---CDNLIKIWKQEGDKWIEETKLENHSD  221 (318)
Q Consensus       151 ~~~~~~~-----h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~las-gs---~d~~i~iwd~~~~~~~~~~~~~~h~~  221 (318)
                       ...+..     ....++.+...|+                 +...++ ..   ..+.-.+|+...++.....  .+ -.
T Consensus        90 -~~~l~~~~~~~~~~~~nd~~vd~~-----------------G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~--~~-~~  148 (295)
T d2ghsa1          90 -LTLHAELESDLPGNRSNDGRMHPS-----------------GALWIGTMGRKAETGAGSIYHVAKGKVTKLF--AD-IS  148 (295)
T ss_dssp             -EEEEECSSTTCTTEEEEEEEECTT-----------------SCEEEEEEETTCCTTCEEEEEEETTEEEEEE--EE-ES
T ss_pred             -eeEEeeeecCCCcccceeeEECCC-----------------CCEEEEeccccccccceeEeeecCCcEEEEe--ec-cC
Confidence             122211     1113455555554                 222222 21   1224456666666432221  12 22


Q ss_pred             CeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcce---eeEE---eeecCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy2762         222 WVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTW---TPFI---MNTFDDVVWNVSWSLTGDILTVSCGDNSVSLW  295 (318)
Q Consensus       222 ~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~---~~~~---~~~~~~~v~~v~~spdg~~l~s~~~D~~v~iW  295 (318)
                      .-+.+.|+|+   ...++++-+..+.|..++.......   ....   ..........+++..+|++.++.-..+.|..+
T Consensus       149 ~~Ng~~~s~d---~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~  225 (295)
T d2ghsa1         149 IPNSICFSPD---GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY  225 (295)
T ss_dssp             SEEEEEECTT---SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred             CcceeeecCC---CceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEe
Confidence            3578999997   3446677777888988887542211   1111   12234557889999999887766567778777


Q ss_pred             E
Q psy2762         296 K  296 (318)
Q Consensus       296 ~  296 (318)
                      +
T Consensus       226 d  226 (295)
T d2ghsa1         226 D  226 (295)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=94.75  E-value=0.11  Score=43.35  Aligned_cols=107  Identities=11%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             eEEEEEccCCeEEEEEEc-ccCCCCeeEEEEccCCCCCccEEEEEeCC-CeEEEEEcCCCcceeeEEeeecCCcEEEEEE
Q psy2762         199 LIKIWKQEGDKWIEETKL-ENHSDWVRDVAWAPSWGLSKCMIASCSQD-RKVIIWTSNDYVTWTPFIMNTFDDVVWNVSW  276 (318)
Q Consensus       199 ~i~iwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~~~l~s~s~D-~~i~vw~~~~~~~~~~~~~~~~~~~v~~v~~  276 (318)
                      .+.+||..++++.+...+ ..|........+.++    +.+++.|+.+ ..+.+||..+.. |...-.......-.+++.
T Consensus        53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~----g~i~v~Gg~~~~~~~~yd~~~~~-w~~~~~~~~~r~~~~~~~  127 (387)
T d1k3ia3          53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN----GQIVVTGGNDAKKTSLYDSSSDS-WIPGPDMQVARGYQSSAT  127 (387)
T ss_dssp             EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT----SCEEEECSSSTTCEEEEEGGGTE-EEECCCCSSCCSSCEEEE
T ss_pred             EEEEEECCCCcEeecCCCCCCcccceeEEEEecC----CcEEEeecCCCcceeEecCccCc-ccccccccccccccceee
Confidence            367899988876443322 233333445677775    7888888765 689999987643 432111111223346788


Q ss_pred             cCCCCEEEEEeCC------CeEEEEEECCCCceEEEeeecc
Q psy2762         277 SLTGDILTVSCGD------NSVSLWKENTDGAWQCITEMGK  311 (318)
Q Consensus       277 spdg~~l~s~~~D------~~v~iW~~~~~~~~~~~~~~~~  311 (318)
                      .+||+.++.++.+      ..+.+||... ..|..+.++..
T Consensus       128 ~~dG~v~v~GG~~~~~~~~~~v~~yd~~~-~~W~~~~~~~~  167 (387)
T d1k3ia3         128 MSDGRVFTIGGSWSGGVFEKNGEVYSPSS-KTWTSLPNAKV  167 (387)
T ss_dssp             CTTSCEEEECCCCCSSSCCCCEEEEETTT-TEEEEETTSCS
T ss_pred             ecCCceeeeccccccccccceeeeecCCC-CceeecCCCcc
Confidence            8899999988753      3688998554 68988766543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.36  E-value=0.16  Score=39.94  Aligned_cols=91  Identities=5%  Similarity=-0.049  Sum_probs=53.2

Q ss_pred             ceEEEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeC----CC--eEEEEEcCCCcceeeE
Q psy2762         189 KRLVSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQ----DR--KVIIWTSNDYVTWTPF  262 (318)
Q Consensus       189 ~~lasgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~----D~--~i~vw~~~~~~~~~~~  262 (318)
                      +.+|-.+ ++-|.+.|+.+++..+   +..+...+....|||+    |+.||-.+.    +.  .|.+.+..+....+..
T Consensus        13 ~~v~f~~-~~dl~~~d~~~g~~~~---Lt~~~~~~~~p~~SPD----G~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt   84 (281)
T d1k32a2          13 DRIIFVC-CDDLWEHDLKSGSTRK---IVSNLGVINNARFFPD----GRKIAIRVMRGSSLNTADLYFYNGENGEIKRIT   84 (281)
T ss_dssp             TEEEEEE-TTEEEEEETTTCCEEE---EECSSSEEEEEEECTT----SSEEEEEEEESTTCCEEEEEEEETTTTEEEECC
T ss_pred             CEEEEEe-CCcEEEEECCCCCEEE---EecCCCcccCEEECCC----CCEEEEEEeeCCCCCceEEEEEEecCCceEEee
Confidence            3444333 3457777888876533   4456667889999996    777775432    22  2555555543311110


Q ss_pred             ----EeeecCCcEEEEEEcCCCCEEEEEe
Q psy2762         263 ----IMNTFDDVVWNVSWSLTGDILTVSC  287 (318)
Q Consensus       263 ----~~~~~~~~v~~v~~spdg~~l~s~~  287 (318)
                          ............+|+|||+.|+...
T Consensus        85 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          85 YFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             CCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             ecCCCccCccccccccccCCCCCEEEEEE
Confidence                0011112456789999999998753

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.55  E-value=3.6  Score=35.07  Aligned_cols=110  Identities=14%  Similarity=0.149  Sum_probs=63.4

Q ss_pred             cceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccCCeEEEEEEccc-----C-CCCeeEEEEccCCCCC
Q psy2762         162 CNAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEGDKWIEETKLEN-----H-SDWVRDVAWAPSWGLS  235 (318)
Q Consensus       162 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~~~~~~~~~~~~-----h-~~~V~~v~~sp~~~~~  235 (318)
                      ...++|.|+                 +..|++--..|.|++++..+++......+..     + ..-...|+|+|++..+
T Consensus        29 P~~la~~pd-----------------g~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n   91 (450)
T d1crua_          29 PHALLWGPD-----------------NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNN   91 (450)
T ss_dssp             EEEEEECTT-----------------SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTS
T ss_pred             ceEEEEeCC-----------------CeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccC
Confidence            457888886                 4566666557999999877765444444321     1 2346789999987766


Q ss_pred             ccEEEEEeC------C----Ce--EEEEEcCCCcce--eeE-Eee----ecCCcEEEEEEcCCCCEEEEEeC
Q psy2762         236 KCMIASCSQ------D----RK--VIIWTSNDYVTW--TPF-IMN----TFDDVVWNVSWSLTGDILTVSCG  288 (318)
Q Consensus       236 ~~~l~s~s~------D----~~--i~vw~~~~~~~~--~~~-~~~----~~~~~v~~v~~spdg~~l~s~~~  288 (318)
                      +...++-..      +    ..  ++.+........  ... .+.    .....-..+.|.|||.+.++.++
T Consensus        92 ~~iYvsyt~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_          92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CEEEEEEecCCCCCcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence            665554321      1    11  333333322110  011 111    11234679999999998887764

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=86.00  E-value=7.9  Score=31.72  Aligned_cols=204  Identities=12%  Similarity=0.081  Sum_probs=106.2

Q ss_pred             cCCCCEEEEeeCCCcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecC----CCCCcEEEEEE--CCC--eEE
Q psy2762          22 DYLGLYLATCSSDHTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAH----PQFGTLLASCS--YDR--KVI   93 (318)
Q Consensus        22 ~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~----~~~~~~las~s--~Dg--~v~   93 (318)
                      +|...+++.....+-|.+||++            |+.+..+.  .+.++.|....    .....-|+.++  .++  +|.
T Consensus        37 ~p~~SlI~gTdK~~Gl~vYdL~------------G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~  102 (353)
T d1h6la_          37 NPQNSKLITTNKKSGLAVYSLE------------GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE  102 (353)
T ss_dssp             CGGGCEEEEEETTSCCEEEETT------------CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEE
T ss_pred             CcCccEEEEEcCcCCEEEEcCC------------CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEE
Confidence            3456778777777779999996            45565554  34555544320    01122344444  222  577


Q ss_pred             EEeCCCC-cEEEEEEecCC-----CcCeEEEEe--eCCCCCcEEEEeecCCeEEEEEeecCCC-Ccceeeec--cccccc
Q psy2762          94 IWRGDNG-NWFKYYEYNNH-----DSSVNSIAW--APKEFGLILACGSSDGTISFLTYMSDTN-SWESRKIA--AHTIGC  162 (318)
Q Consensus        94 vWd~~~~-~~~~~~~~~~h-----~~~v~~v~~--~p~~~~~~lasgs~d~~i~i~~~~~~~~-~~~~~~~~--~h~~~v  162 (318)
                      +|.+... ...........     ...++.+++  +|.....++.....+|.+..|.+....+ ......+.  .-...+
T Consensus       103 ~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~  182 (353)
T d1h6la_         103 IYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQT  182 (353)
T ss_dssp             EEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCE
T ss_pred             EEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCcc
Confidence            8876432 11111111101     123666666  5553234566667788888887644332 11112221  112234


Q ss_pred             ceeeeCCCCCCCccccccCCCCCCccceEEEecCCCeEEEEEccC--Ce-EEEEEEcc--cCCCCeeEEEEccCCCCCcc
Q psy2762         163 NAVSWGPGIGSLSELDLKGSKLGGVAKRLVSGGCDNLIKIWKQEG--DK-WIEETKLE--NHSDWVRDVAWAPSWGLSKC  237 (318)
Q Consensus       163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~lasgs~d~~i~iwd~~~--~~-~~~~~~~~--~h~~~V~~v~~sp~~~~~~~  237 (318)
                      ..|.+.+.                 ...|..+-++..|..++.+.  .. ........  .....+..|+.-......|.
T Consensus       183 EGCVvDde-----------------~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~Gy  245 (353)
T d1h6la_         183 EGMAADDE-----------------YGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGY  245 (353)
T ss_dssp             EEEEEETT-----------------TTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEE
T ss_pred             ceEEEeCC-----------------CCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeE
Confidence            45555543                 24677777876555554431  11 11111121  23566777775543222467


Q ss_pred             EEEEEeCCCeEEEEEcCCC
Q psy2762         238 MIASCSQDRKVIIWTSNDY  256 (318)
Q Consensus       238 ~l~s~s~D~~i~vw~~~~~  256 (318)
                      +|+|.-.|.+..||+....
T Consensus       246 livSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         246 LLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             EEEEEGGGTEEEEEESSTT
T ss_pred             EEEEcCCCCeEEEEecCCC
Confidence            7777777899999998764

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=84.68  E-value=10  Score=31.95  Aligned_cols=29  Identities=10%  Similarity=-0.005  Sum_probs=24.4

Q ss_pred             cEEEEEEcCCCCEEEEEe-CCCeEEEEEEC
Q psy2762         270 VVWNVSWSLTGDILTVSC-GDNSVSLWKEN  298 (318)
Q Consensus       270 ~v~~v~~spdg~~l~s~~-~D~~v~iW~~~  298 (318)
                      ..+.|..+|||++++.++ .+.+|.+.|.+
T Consensus       276 sPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         276 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             SCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             CCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence            356899999999988776 48899999964

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.63  E-value=7.8  Score=29.73  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=24.6

Q ss_pred             CCCEEEEEeCCC-----eEEEEEECCCCceEEEeeecccc
Q psy2762         279 TGDILTVSCGDN-----SVSLWKENTDGAWQCITEMGKTS  313 (318)
Q Consensus       279 dg~~l~s~~~D~-----~v~iW~~~~~~~~~~~~~~~~~~  313 (318)
                      ++++++.|+.++     .+.+||... +.|.++..|-.-+
T Consensus       242 ~~~l~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~R  280 (288)
T d1zgka1         242 QGRIYVLGGYDGHTFLDSVECYDPDT-DTWSEVTRMTSGR  280 (288)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSSCC
T ss_pred             CCEEEEEecCCCCeecceEEEEECCC-CEEEECCCCCCCc
Confidence            788888777654     477888766 5899998875443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.04  E-value=9.5  Score=29.54  Aligned_cols=231  Identities=13%  Similarity=-0.039  Sum_probs=112.1

Q ss_pred             CcEEEEEcCCCcCCCCCCCCcceEEEEecccccCeEEEEecCCCCCcEEEEEECCCeEEEEeCCCCcE--EEEEEecCCC
Q psy2762          35 HTVKVFNLDRNLKKDDSHSQKGTLIAELKGHSGPVWQVAWAHPQFGTLLASCSYDRKVIIWRGDNGNW--FKYYEYNNHD  112 (318)
Q Consensus        35 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~~~las~s~Dg~v~vWd~~~~~~--~~~~~~~~h~  112 (318)
                      ..|+-.+++.+         ...   .+-.....+.++.|.. ..+.++.+=..++.|.--++.....  .....+....
T Consensus        10 ~~I~~~~l~~~---------~~~---~~~~~~~~~~~id~d~-~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~   76 (266)
T d1ijqa1          10 HEVRKMTLDRS---------EYT---SLIPNLRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI   76 (266)
T ss_dssp             SSEEEEETTSC---------CCE---EEECSCSSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred             CeEEEEECCCC---------cce---eeeCCCCceEEEEEEe-CCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCC
Confidence            35888888632         111   1222445667888853 2334444434456666555543210  0111122222


Q ss_pred             cCeEEEEeeCCCCCcEEEEeecCCeEEEEEeecCCCCcceeeecccccccceeeeCCCCCCCccccccCCCCCCccceE-
Q psy2762         113 SSVNSIAWAPKEFGLILACGSSDGTISFLTYMSDTNSWESRKIAAHTIGCNAVSWGPGIGSLSELDLKGSKLGGVAKRL-  191 (318)
Q Consensus       113 ~~v~~v~~~p~~~~~~lasgs~d~~i~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~l-  191 (318)
                      ..+..+++.+.. +.+..+-...+.|.+.++. +..  ....+.........++..|..                +..+ 
T Consensus        77 ~~p~glAvD~~~-~~lY~~d~~~~~I~v~~~~-g~~--~~~~~~~~~~~P~~l~vd~~~----------------g~ly~  136 (266)
T d1ijqa1          77 QAPDGLAVDWIH-SNIYWTDSVLGTVSVADTK-GVK--RKTLFRENGSKPRAIVVDPVH----------------GFMYW  136 (266)
T ss_dssp             SCCCEEEEETTT-TEEEEEETTTTEEEEEETT-SSS--EEEEEECTTCCEEEEEEETTT----------------TEEEE
T ss_pred             CCcceEEEeecc-ceEEEEecCCCEEEeEecC-Cce--EEEEEcCCCCCcceEEEEccc----------------CeEEE
Confidence            345677777654 4455555666778777652 211  111122222234556666642                2222 


Q ss_pred             EEecCCCeEEEEEccCCeEEEEEEcccCCCCeeEEEEccCCCCCccEEEEEeCCCeEEEEEcCCCcceeeEEeeecCCcE
Q psy2762         192 VSGGCDNLIKIWKQEGDKWIEETKLENHSDWVRDVAWAPSWGLSKCMIASCSQDRKVIIWTSNDYVTWTPFIMNTFDDVV  271 (318)
Q Consensus       192 asgs~d~~i~iwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~~~l~s~s~D~~i~vw~~~~~~~~~~~~~~~~~~~v  271 (318)
                      .-.+..+.|...+++........  ...-...+.+++.+.   .+.+..+-+..+.|...++.+................
T Consensus       137 ~~~~~~~~I~r~~~dGs~~~~l~--~~~~~~p~gl~iD~~---~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p  211 (266)
T d1ijqa1         137 TDWGTPAKIKKGGLNGVDIYSLV--TENIQWPNGITLDLL---SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP  211 (266)
T ss_dssp             EECSSSCEEEEEETTSCCEEEEE--CSSCSCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSE
T ss_pred             eccCCCcceeEeccCCCceeccc--ccccceeeEEEeecc---ccEEEEecCCcCEEEEEECCCCCEEEEEeCCCccccc
Confidence            22344455666666654432222  223345688999885   3445555466788888888664322221111122335


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEECCCCceE
Q psy2762         272 WNVSWSLTGDILTVSCGDNSVSLWKENTDGAWQ  304 (318)
Q Consensus       272 ~~v~~spdg~~l~s~~~D~~v~iW~~~~~~~~~  304 (318)
                      .++++. .+....+-..++.|.-.+...+....
T Consensus       212 ~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~  243 (266)
T d1ijqa1         212 FSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN  243 (266)
T ss_dssp             EEEEEE-TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred             EEEEEE-CCEEEEEECCCCeEEEEECCCCcceE
Confidence            577776 34444444456666555544444333