Psyllid ID: psy2812

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccEEEEEEccccccHHHHHHHHHHccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccEEcccccccccEEEEEEEEEEccEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHEEccccccccEEEEEEEEcccccHHHHHHHHccccccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mayrglsrhinidslrdprnkfklqeligegtygevywakdvetgDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDlsvhpnipsfyglylrrggqpeedQLWFVMELCTGGSVTDLVQGMKkrgvslseDQIAYILYGTVQVD
Flexible Loop (DISEMBL)
mayrglsrhinidslrdprnkFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKrgvslsedqiayilygtvqvd
Low Complexity Region (SEG)
MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAikimenipenieeieeeYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD
Disordered region (IsUnstruct)
*******************NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTV***
Disordered Region (DISOPRED)
******************RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV*
Disordered Region (DISEMBL)
MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD
Disordered Region (DISPRO)
*AYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q8NEV4	1616	Myosin-IIIa OS=Homo sapie	yes	N/A	0.842	0.079	0.432	8e-25
Q8K3H5	1613	Myosin-IIIa OS=Mus muscul	yes	N/A	0.842	0.079	0.425	3e-24
P83510	1323	Traf2 and NCK-interacting	no	N/A	0.796	0.091	0.422	5e-22
Q9UKE5	1360	TRAF2 and NCK-interacting	no	N/A	0.796	0.088	0.422	6e-22
Q9JM52	1308	Misshapen-like kinase 1 O	no	N/A	0.802	0.093	0.411	7e-22
Q8N4C8	1332	Misshapen-like kinase 1 O	no	N/A	0.802	0.091	0.411	7e-22
O95819	1239	Mitogen-activated protein	no	N/A	0.796	0.097	0.414	1e-21
Q8WXR4	1341	Myosin-IIIb OS=Homo sapie	no	N/A	0.809	0.091	0.395	2e-21
Q23356	1096	Serine/threonine-protein	yes	N/A	0.855	0.118	0.428	3e-21
F1LP90	1336	Misshapen-like kinase 1 O	no	N/A	0.776	0.088	0.416	4e-21

>sp|Q8NEV4|MYO3A_HUMAN Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=2 SV=2

 Score =  112 bits (280), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 90/141 (63%), Gaps = 13/141 (9%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A+KI++ I     +I+E
Sbjct: 5   IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPI----HDIDE 60

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           E        IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC+GGSVTDL
Sbjct: 61  E--------IEAEYNILKALSDHPNVVRFYGIYFKKD-KVNGDKLWLVLELCSGGSVTDL 111

Query: 126 VQGMKKRGVSLSEDQIAYILY 146
           V+G  KRG  +SE  IAYIL+
Sbjct: 112 VKGFLKRGERMSEPLIAYILH 132

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8K3H5|MYO3A_MOUSE Myosin-IIIa OS=Mus musculus GN=Myo3a PE=2 SV=1

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 13/141 (9%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           + + I  D+  DP + +++ E IG+GTYG+V+   + ++G   A+KI++ I     +I+E
Sbjct: 5   IGKTIIFDNFPDPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPI----HDIDE 60

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           E        IE EY +L+ LS HPN+  FYG+Y ++  +   D+LW V+ELC GGSVTDL
Sbjct: 61  E--------IEAEYNILRTLSDHPNVVRFYGIYFKKD-KINGDKLWLVLELCNGGSVTDL 111

Query: 126 VQGMKKRGVSLSEDQIAYILY 146
           V+G  KRG  +SE  IAYIL+
Sbjct: 112 VKGFLKRGERMSEPVIAYILH 132

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P83510|TNIK_MOUSE Traf2 and NCK-interacting protein kinase OS=Mus musculus GN=Tnik PE=1 SV=2

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 14/135 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ +LRDP   F+L EL+G GTYG+VY  + V+TG   AIK+M+   +  EE       
Sbjct: 13  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------- 65

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
                I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDL++  
Sbjct: 66  -----IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 120

Query: 130 KKRGVSLSEDQIAYI 144
           K  G +L E+ IAYI
Sbjct: 121 K--GNTLKEEWIAYI 133

Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo sapiens GN=TNIK PE=1 SV=1

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 14/135 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ +LRDP   F+L EL+G GTYG+VY  + V+TG   AIK+M+   +  EE       
Sbjct: 13  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------- 65

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
                I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDL++  
Sbjct: 66  -----IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 120

Query: 130 KKRGVSLSEDQIAYI 144
           K  G +L E+ IAYI
Sbjct: 121 K--GNTLKEEWIAYI 133

Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading. Phosphorylates SMAD1 on Thr-322.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9JM52|MINK1_MOUSE Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=3

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 14/136 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ +LRDP   F+L E++G GTYG+VY  + V+TG   AIK+M            +   
Sbjct: 13  IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM------------DVTE 60

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
            ++  I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDLV+  
Sbjct: 61  DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNT 120

Query: 130 KKRGVSLSEDQIAYIL 145
           K  G +L ED IAYI 
Sbjct: 121 K--GNALKEDCIAYIC 134

Serine/threonine kinase which acts as a negative regulator of Ras-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8N4C8|MINK1_HUMAN Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=2

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 14/136 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ +LRDP   F+L E++G GTYG+VY  + V+TG   AIK+M            +   
Sbjct: 13  IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM------------DVTE 60

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
            ++  I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDLV+  
Sbjct: 61  DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNT 120

Query: 130 KKRGVSLSEDQIAYIL 145
           K  G +L ED IAYI 
Sbjct: 121 K--GNALKEDCIAYIC 134

Isoform 4 can activate the JNK pathway. Involved in the regulation of actin cytoskeleton reorganization, cell-matrix adhesion, cell-cell adhesion and cell migration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2

 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 14/135 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ SLRDP   F+L E++G GTYG+VY  + V+TG   AIK+M            +   
Sbjct: 13  IDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM------------DVTE 60

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
            ++  I+ E  +LK  S H NI ++YG ++++     +DQLW VME C  GS+TDLV+  
Sbjct: 61  DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT 120

Query: 130 KKRGVSLSEDQIAYI 144
           K  G +L ED IAYI
Sbjct: 121 K--GNTLKEDWIAYI 133

Serine/threonine kinase that may play a role in the response to environmental stress and cytokines such as TNF-alpha. Appears to act upstream of the JUN N-terminal pathway. Phosphorylates SMAD1 on Thr-322.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8WXR4|MYO3B_HUMAN Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=4

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 21/144 (14%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           + ++SL DP + +++ E IG+GTYG+VY   +   G   A+KI++ + +  EEIE EY +
Sbjct: 15  LGLESLPDPTDTWEIIETIGKGTYGKVYKVTNKRDGSLAAVKILDPVSDMDEEIEAEYNI 74

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR----GGQPEEDQLWFVMELCTGGSVTDL 125
           L+ L              HPN+  FYG++ +     GGQ     LW V+ELC GGSVT+L
Sbjct: 75  LQFLP------------NHPNVVKFYGMFYKADHCVGGQ-----LWLVLELCNGGSVTEL 117

Query: 126 VQGMKKRGVSLSEDQIAYILYGTV 149
           V+G+ + G  L E  I+YILYG +
Sbjct: 118 VKGLLRCGQRLDEAMISYILYGAL 141

Probable actin-based motor with a protein kinase activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q23356|MIG15_CAEEL Serine/threonine-protein kinase mig-15 OS=Caenorhabditis elegans GN=mig-15 PE=2 SV=3

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 17/147 (11%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           M+  GL   I+++SLRDP   F+L E++G GTYG+VY  + V+T    AIKIM     NI
Sbjct: 1   MSSSGLD-EIDLNSLRDPAGIFELIEVVGNGTYGQVYKGRHVKTAQLAAIKIM-----NI 54

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR--GGQPEEDQLWFVMELCT 118
            E EE+ + L       E  +LK  S H N+ ++YG ++++      + DQLW VME C 
Sbjct: 55  NEDEEDEIKL-------EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEFCG 107

Query: 119 GGSVTDLVQGMKKRGVSLSEDQIAYIL 145
            GS+TDLV+  K  G SL E+ IAYI 
Sbjct: 108 SGSITDLVKNTK--GGSLKEEWIAYIC 132

Involved in cell migration and signal transduction. Important in several developmental processes including epidermal development, Q neuroblast migrations and muscle arm targeting. Required with ina-1/pat-3 to stabilize the commissural axons growth cone along a precise direction and are required for the cell to respond appropriately when signaling in the growth cone must change.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|F1LP90|MINK1_RAT Misshapen-like kinase 1 OS=Rattus norvegicus GN=Mink1 PE=1 SV=2

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 14/132 (10%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
           +LRDP   F+L E++G GTYG+VY  + V+TG   AIK+M            +    ++ 
Sbjct: 17  ALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM------------DVTEDEEE 64

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
            I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDLV+  K  G
Sbjct: 65  EIKQEINMLKKYSHHRNIATYYGAFIKKSPPGNDDQLWLVMEFCGAGSVTDLVKNTK--G 122

Query: 134 VSLSEDQIAYIL 145
            +L ED IAYI 
Sbjct: 123 NALKEDCIAYIC 134

Serine/threonine kinase which acts as a negative regulator ofRas-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
345483293	1661	PREDICTED: LOW QUALITY PROTEIN: myosin-I	0.914	0.083	0.644	4e-51
332030214	1519	Myosin IIIA [Acromyrmex echinatior]	0.907	0.090	0.647	3e-47
383859995	1662	PREDICTED: myosin-IIIa [Megachile rotund	0.914	0.083	0.631	7e-47
158287548	1593	AGAP011099-PA [Anopheles gambiae str. PE	0.914	0.087	0.609	4e-45
350401119	1719	PREDICTED: myosin-IIIa-like [Bombus impa	0.914	0.080	0.618	1e-44
328781964	1727	PREDICTED: myosin-IIIa [Apis mellifera]	0.914	0.080	0.618	1e-44
380028233	1709	PREDICTED: myosin-IIIa [Apis florea]	0.914	0.081	0.618	2e-44
157124824	1764	myosin iii [Aedes aegypti] gi|108873858|	0.907	0.078	0.6	3e-44
157124822	1462	myosin iii [Aedes aegypti] gi|108873857|	0.914	0.095	0.596	4e-44
170043065	1484	myosin iii [Culex quinquefasciatus] gi|1	0.914	0.093	0.596	5e-43

>gi|345483293|ref|XP_003424787.1| PREDICTED: LOW QUALITY PROTEIN: myosin-IIIa [Nasonia vitripennis]

 Score =  206 bits (523), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 98/152 (64%), Positives = 123/152 (80%), Gaps = 13/152 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAYRGLS+H+N D++ DP ++F L+ELIGEGTYGEVY A+D +TG+HVAIKI+EN+ +NI
Sbjct: 8   MAYRGLSQHVNFDTIPDPEDRFALEELIGEGTYGEVYAARDKQTGEHVAIKILENVADNI 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP-EEDQLWFVMELCTG 119
           EEIEEE+LVL+DLS+            HPNIP+F+G+YL+R     EEDQLWFVMELCTG
Sbjct: 68  EEIEEEFLVLRDLSM------------HPNIPAFHGIYLKRAKPAQEEDQLWFVMELCTG 115

Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GSVTDLVQG+K+RG  L++DQIAYIL  TV+ 
Sbjct: 116 GSVTDLVQGLKRRGSRLTDDQIAYILRETVEA 147

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030214|gb|EGI69997.1| Myosin IIIA [Acromyrmex echinatior]

 Score =  192 bits (489), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 99/153 (64%), Positives = 118/153 (77%), Gaps = 15/153 (9%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H+N D + DP  +F+L+ELIGEGTYGEVY A D ET + VAIKI+EN+ +NI
Sbjct: 8   MAYHGLSQHVNFDVIPDPGERFRLEELIGEGTYGEVYAAYDKETDNKVAIKILENVADNI 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG--GQPEEDQLWFVMELCT 118
           EEIEE            EYLVL+DLS HPNIP F+GL+L+R   GQ EEDQLWFV+ELCT
Sbjct: 68  EEIEE------------EYLVLRDLSQHPNIPIFHGLFLKRAKPGQ-EEDQLWFVIELCT 114

Query: 119 GGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GGSVTDLVQG+KKRG  L++DQIAYIL  TV+ 
Sbjct: 115 GGSVTDLVQGLKKRGSRLTDDQIAYILKETVEA 147

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859995|ref|XP_003705477.1| PREDICTED: myosin-IIIa [Megachile rotundata]

 Score =  191 bits (486), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 96/152 (63%), Positives = 116/152 (76%), Gaps = 13/152 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H+N D + DP ++F L+ELIGEGTYGEVY A D ETG+ VAIKI+EN+ +NI
Sbjct: 8   MAYHGLSQHVNFDVIPDPEDRFVLEELIGEGTYGEVYSAHDNETGNKVAIKILENVADNI 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP-EEDQLWFVMELCTG 119
           EEIEE            EYLVL+DLS HPNIP F+GL+L+R     EEDQLWFVMELC G
Sbjct: 68  EEIEE------------EYLVLRDLSHHPNIPQFHGLFLKRAKPAQEEDQLWFVMELCAG 115

Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GSVTDLVQG+KK+G  L+++QIAYIL  TV+ 
Sbjct: 116 GSVTDLVQGLKKKGKRLTDEQIAYILRETVEA 147

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287548|ref|XP_309547.4| AGAP011099-PA [Anopheles gambiae str. PEST] gi|157019704|gb|EAA05267.5| AGAP011099-PA [Anopheles gambiae str. PEST]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/151 (60%), Positives = 111/151 (73%), Gaps = 12/151 (7%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H++   L +P  +F+L +LIGEGTYGEVY AKD  TG   A+KI+E+I +NI
Sbjct: 1   MAYNGLSQHVDFSRLPNPSERFELLDLIGEGTYGEVYSAKDKHTGRKYAVKILESIADNI 60

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           EEIEEEYLVL+            DLS HPNIP F GL+L+RG   E+DQLWFV+ELCTGG
Sbjct: 61  EEIEEEYLVLR------------DLSKHPNIPDFAGLFLKRGTTVEDDQLWFVLELCTGG 108

Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           SVTDLVQG++ RG  LS +QIAYIL  TVQ 
Sbjct: 109 SVTDLVQGLRSRGARLSNNQIAYILRETVQA 139

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401119|ref|XP_003486052.1| PREDICTED: myosin-IIIa-like [Bombus impatiens]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/152 (61%), Positives = 114/152 (75%), Gaps = 13/152 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H+N D + DP ++F L+ELIGEGTYGEVY A   E+G+ VAIKI+EN+ +NI
Sbjct: 8   MAYHGLSQHVNFDVIPDPGDRFVLEELIGEGTYGEVYSAYCNESGNKVAIKILENVADNI 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP-EEDQLWFVMELCTG 119
           EEIEE            EYLVL+DLS HPNIP F GL+L+R     EEDQLWFVMELCTG
Sbjct: 68  EEIEE------------EYLVLRDLSHHPNIPLFRGLFLKRAKPAQEEDQLWFVMELCTG 115

Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GSVTDLVQG+K++G  L++DQI YIL  TV+ 
Sbjct: 116 GSVTDLVQGLKRKGRRLTDDQIGYILAETVEA 147

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781964|ref|XP_393968.4| PREDICTED: myosin-IIIa [Apis mellifera]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/152 (61%), Positives = 112/152 (73%), Gaps = 13/152 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H+N D + DP ++F L+ELIGEGTYG VY A   ET   VAIKI+EN+ +N+
Sbjct: 8   MAYHGLSQHVNFDVIPDPGDRFILEELIGEGTYGAVYSAHCNETDKKVAIKILENVADNV 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG-QPEEDQLWFVMELCTG 119
           EEIEE            EYLVL+DLS HPNIP FYGL+L+R     EEDQLWFVMELCTG
Sbjct: 68  EEIEE------------EYLVLRDLSHHPNIPLFYGLFLKRAKPNQEEDQLWFVMELCTG 115

Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GSVTDL QG+KK+G  L++DQIAYIL  TV+ 
Sbjct: 116 GSVTDLAQGLKKKGKRLTDDQIAYILRETVEA 147

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028233|ref|XP_003697812.1| PREDICTED: myosin-IIIa [Apis florea]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/152 (61%), Positives = 112/152 (73%), Gaps = 13/152 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H+N D + DP ++F L+ELIGEGTYG VY A   ET   VAIKI+EN+ +N+
Sbjct: 8   MAYHGLSQHVNFDVIPDPGDRFILEELIGEGTYGAVYSAHCNETEKKVAIKILENVADNV 67

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG-QPEEDQLWFVMELCTG 119
           EEIEE            EYLVL+DLS HPNIP FYGL+L+R     EEDQLWFVMELCTG
Sbjct: 68  EEIEE------------EYLVLRDLSHHPNIPLFYGLFLKRAKPSQEEDQLWFVMELCTG 115

Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           GSVTDL QG+KK+G  L++DQIAYIL  TV+ 
Sbjct: 116 GSVTDLAQGLKKKGKRLTDDQIAYILRETVEA 147

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124824|ref|XP_001660541.1| myosin iii [Aedes aegypti] gi|108873858|gb|EAT38083.1| AAEL009991-PA [Aedes aegypti]

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 90/150 (60%), Positives = 110/150 (73%), Gaps = 12/150 (8%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H++   L +P  +F+L +LIGEGTYGEVY AKD  TG   A+KI+E+I +NI
Sbjct: 1   MAYNGLSQHVDFLRLSNPTERFELLDLIGEGTYGEVYSAKDKHTGRKYAVKILESIADNI 60

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           EEIEEEYLVL+            DLS HPNIP F GL+L+RG   E+DQLWFV+ELCTGG
Sbjct: 61  EEIEEEYLVLR------------DLSKHPNIPDFAGLFLKRGATVEDDQLWFVLELCTGG 108

Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
           SVTDLVQG++ RG  L+ +QIAYIL  TV 
Sbjct: 109 SVTDLVQGLRNRGSRLTNNQIAYILRETVH 138

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124822|ref|XP_001660540.1| myosin iii [Aedes aegypti] gi|108873857|gb|EAT38082.1| AAEL009991-PB [Aedes aegypti]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/151 (59%), Positives = 110/151 (72%), Gaps = 12/151 (7%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H++   L +P  +F+L +LIGEGTYGEVY AKD  TG   A+KI+E+I +NI
Sbjct: 1   MAYNGLSQHVDFLRLSNPTERFELLDLIGEGTYGEVYSAKDKHTGRKYAVKILESIADNI 60

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           EEIEEEYLVL+            DLS HPNIP F GL+L+RG   E+DQLWFV+ELCTGG
Sbjct: 61  EEIEEEYLVLR------------DLSKHPNIPDFAGLFLKRGATVEDDQLWFVLELCTGG 108

Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           SVTDLVQG++ RG  L+ +QIAYIL  TV  
Sbjct: 109 SVTDLVQGLRNRGSRLTNNQIAYILRETVHA 139

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043065|ref|XP_001849223.1| myosin iii [Culex quinquefasciatus] gi|167866482|gb|EDS29865.1| myosin iii [Culex quinquefasciatus]

 Score =  178 bits (452), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 90/151 (59%), Positives = 109/151 (72%), Gaps = 12/151 (7%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI 60
           MAY GLS+H++   L +P  +F+L +LIGEGTYGEVY AKD   G   A+KI+E+I +NI
Sbjct: 1   MAYNGLSQHVDFVRLPNPGERFELLDLIGEGTYGEVYSAKDKHNGRKFAVKILESIADNI 60

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           EEIEEEYLVL+            DLS HPNIP F GL+L+RG   E+DQLWFV+ELCTGG
Sbjct: 61  EEIEEEYLVLR------------DLSKHPNIPDFAGLFLKRGLTVEDDQLWFVLELCTGG 108

Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
           SVTDLVQG++ RG  LS +QIAYIL  TV  
Sbjct: 109 SVTDLVQGLRNRGSRLSNNQIAYILRETVHA 139

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
UNIPROTKB|B1ANA3	197	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.649	0.397	1e-20
UNIPROTKB|Q4G0X2	247	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.518	0.397	1e-20
UNIPROTKB|F5H0U9	664	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.192	0.397	1e-19
UNIPROTKB|Q8NEV4	1616	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.079	0.397	4e-19
MGI|MGI:2183924	1613	Myo3a "myosin IIIA" [Mus muscu	0.842	0.079	0.390	1.3e-18
RGD|1560083	1614	Myo3a "myosin IIIA" [Rattus no	0.842	0.079	0.390	1.3e-18
UNIPROTKB|E1C7H7	1624	MYO3A "Uncharacterized protein	0.815	0.076	0.416	1.7e-18
UNIPROTKB|F1RTW9	596	MYO3A "Uncharacterized protein	0.835	0.213	0.385	2.7e-18
UNIPROTKB|E2RQX5	1613	MYO3A "Uncharacterized protein	0.815	0.076	0.394	2.8e-18
UNIPROTKB|E1C190	1119	MYO3B "Uncharacterized protein	0.855	0.116	0.391	2.8e-18

UNIPROTKB|B1ANA3 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 56/141 (39%), Positives = 80/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC+GGSVTDL
Sbjct:    59 ------DEEIEAEYNILKALSDHPNVVRFYGIYFKKD-KVNGDKLWLVLELCSGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPLIAYILH 132

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q4G0X2 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 56/141 (39%), Positives = 80/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC+GGSVTDL
Sbjct:    59 ------DEEIEAEYNILKALSDHPNVVRFYGIYFKKD-KVNGDKLWLVLELCSGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPLIAYILH 132

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F5H0U9 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 56/141 (39%), Positives = 80/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC+GGSVTDL
Sbjct:    59 ------DEEIEAEYNILKALSDHPNVVRFYGIYFKKD-KVNGDKLWLVLELCSGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPLIAYILH 132

GO:0003774 "motor activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q8NEV4 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 56/141 (39%), Positives = 80/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC+GGSVTDL
Sbjct:    59 ------DEEIEAEYNILKALSDHPNVVRFYGIYFKKD-KVNGDKLWLVLELCSGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPLIAYILH 132

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0050896 "response to stimulus" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IDA

GO:0000146 "microfilament motor activity" evidence=IDA;IMP

GO:0060002 "plus-end directed microfilament motor activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0043531 "ADP binding" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0030175 "filopodium" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0031941 "filamentous actin" evidence=IDA

MGI|MGI:2183924 Myo3a "myosin IIIA" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 55/141 (39%), Positives = 80/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + ++G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +L+ LS HPN+  FYG+Y ++  +   D+LW V+ELC GGSVTDL
Sbjct:    59 ------DEEIEAEYNILRTLSDHPNVVRFYGIYFKKD-KINGDKLWLVLELCNGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPVIAYILH 132

GO:0000146 "microfilament motor activity" evidence=ISO;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IDA

GO:0003774 "motor activity" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=ISO;IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0030175 "filopodium" evidence=ISO

GO:0030898 "actin-dependent ATPase activity" evidence=ISO

GO:0031941 "filamentous actin" evidence=ISO

GO:0032426 "stereocilium bundle tip" evidence=IDA

GO:0032433 "filopodium tip" evidence=IDA

GO:0043531 "ADP binding" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO;IDA

GO:0048839 "inner ear development" evidence=IMP

GO:0050896 "response to stimulus" evidence=IEA

GO:0051015 "actin filament binding" evidence=IDA

GO:0051491 "positive regulation of filopodium assembly" evidence=IGI

GO:0060002 "plus-end directed microfilament motor activity" evidence=ISO

RGD|1560083 Myo3a "myosin IIIA" [Rattus norvegicus (taxid:10116)]

 Score = 239 (89.2 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 55/141 (39%), Positives = 79/141 (56%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +L+ LS HPN+  FYG+Y ++  +   D+LW V+ELC GGSVTDL
Sbjct:    59 ------DEEIEAEYNILRTLSDHPNVVRFYGIYFKKD-KINGDKLWLVLELCNGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYILY 146
             V+G  KRG  +SE  IAYIL+
Sbjct:   112 VKGFLKRGERMSEPIIAYILH 132

GO:0000146 "microfilament motor activity" evidence=ISO

GO:0001917 "photoreceptor inner segment" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005516 "calmodulin binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0007605 "sensory perception of sound" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0016459 "myosin complex" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA;ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0030175 "filopodium" evidence=ISO

GO:0030898 "actin-dependent ATPase activity" evidence=IEA;ISO

GO:0031941 "filamentous actin" evidence=IEA;ISO

GO:0032426 "stereocilium bundle tip" evidence=IEA;ISO

GO:0032433 "filopodium tip" evidence=IEA;ISO

GO:0043531 "ADP binding" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0051015 "actin filament binding" evidence=IEA;ISO

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA;ISO

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA;ISO

UNIPROTKB|E1C7H7 MYO3A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 238 (88.8 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 57/137 (41%), Positives = 77/137 (56%)

Query:    10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLV 69
             I  DS  DP + +++ E IG+GTYG+V+   + + G   A                    
Sbjct:     9 IVFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPVHDI---------- 58

Query:    70 LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
               D  IE EY +LK LS HPN+  FYG+Y ++  +   DQLW V+ELC GGSVTDLV+G 
Sbjct:    59 --DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK-NGDQLWLVLELCNGGSVTDLVKGF 115

Query:   130 KKRGVSLSEDQIAYILY 146
              KRG  ++E  IAYIL+
Sbjct:   116 LKRGERMNELIIAYILH 132

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0031941 "filamentous actin" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA

UNIPROTKB|F1RTW9 MYO3A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
 Identities = 54/140 (38%), Positives = 78/140 (55%)

Query:     6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
             + + I  D+  DP + +++ E IG+GTYG+V+   + + G   A                
Sbjct:     5 IGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDI------ 58

Query:    66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                   D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC GGSVTDL
Sbjct:    59 ------DEEIEAEYNILKALSDHPNVVRFYGMYFKKD-KINGDKLWLVLELCNGGSVTDL 111

Query:   126 VQGMKKRGVSLSEDQIAYIL 145
             V+G  K+G  ++E  IAYIL
Sbjct:   112 VKGFLKKGKRMNELIIAYIL 131

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0031941 "filamentous actin" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|E2RQX5 MYO3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 236 (88.1 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 54/137 (39%), Positives = 77/137 (56%)

Query:    10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLV 69
             I  D+  DP + +++ E IG+GTYG+V+   + + G   A                    
Sbjct:     9 IIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDM---------- 58

Query:    70 LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
               D  IE EY +LK LS HPN+  FYG+Y ++  +   D+LW V+ELC GGSV DLV+G+
Sbjct:    59 --DEEIEAEYNILKTLSDHPNVVRFYGMYFKKD-KTNGDKLWLVLELCNGGSVADLVKGL 115

Query:   130 KKRGVSLSEDQIAYILY 146
              K+G  +SE  IAYIL+
Sbjct:   116 LKKGKRMSEPIIAYILH 132

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|E1C190 MYO3B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 234 (87.4 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 56/143 (39%), Positives = 78/143 (54%)

Query:     7 SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXX 66
             S  I ++SL DP + +++ E IG+GTYG+VY   + + G   A                 
Sbjct:    27 SSMIGLESLADPTDTWEIIETIGKGTYGKVYKVANKKDGSLAAVKILDPISDV------- 79

Query:    67 YLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
                  D  IE EY +L+ L  HPN+  FYG++ +   Q    QLW V+ELC GGSVT+LV
Sbjct:    80 -----DEEIEAEYNILQSLPNHPNVVRFYGMFYK-ADQYVGGQLWLVLELCNGGSVTELV 133

Query:   127 QGMKKRGVSLSEDQIAYILYGTV 149
             +G+ K G  L E  I+YILYG +
Sbjct:   134 KGLLKCGQRLDEAMISYILYGAL 156

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=IEA

GO:0001750 "photoreceptor outer segment" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-56
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	9e-33
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-31
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-30
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-30
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-28
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-27
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-27
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-22
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-20
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-20
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-18
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-17
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-17
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-16
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-15
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-15
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-15
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-15
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-15
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-14
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	5e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-14
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	7e-14
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-13
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-12
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-12
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-12
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-11
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-10
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-10
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-09
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	6e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	4e-08
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	7e-08
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-07
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	5e-07
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	6e-07
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	6e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-07
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	7e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	7e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-06
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-06
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-06
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	7e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-06
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-05
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	6e-05
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-05
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	8e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	3e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	5e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	7e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	0.001
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	0.001
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.002
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.002
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.002
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.002
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	0.003
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.003
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.003
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.003
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.003
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.004
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.004
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.004

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  176 bits (448), Expect = 5e-56
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 12/136 (8%)

Query: 15  LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           L DP   F+L E+IGEGTYG+VY A+  +TG  VAIKIM+ I +  EEI+EEY +L+  S
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS 60

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HPNI +FYG ++++     +DQLW VMELC GGSVTDLV+G++K+G 
Sbjct: 61  ------------NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGK 108

Query: 135 SLSEDQIAYILYGTVQ 150
            L E+ IAYIL  T++
Sbjct: 109 RLKEEWIAYILRETLR 124

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score =  117 bits (293), Expect = 9e-33
 Identities = 62/139 (44%), Positives = 86/139 (61%), Gaps = 13/139 (9%)

Query: 8   RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEY 67
           + I  DS  DP + +++ E IG+GTYG+V+   + + G   A+KI++ I     +I+EE 
Sbjct: 6   KTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI----HDIDEE- 60

Query: 68  LVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                  IE EY +LK LS HPN+  FYG+Y ++      DQLW V+ELC GGSVTDLV+
Sbjct: 61  -------IEAEYNILKALSDHPNVVKFYGMYYKKD-VKNGDQLWLVLELCNGGSVTDLVK 112

Query: 128 GMKKRGVSLSEDQIAYILY 146
           G  KRG  + E  IAYIL+
Sbjct: 113 GFLKRGERMEEPIIAYILH 131

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score =  111 bits (279), Expect = 7e-31
 Identities = 59/135 (43%), Positives = 83/135 (61%), Gaps = 14/135 (10%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV 69
           I++ +LRDP   F+L E++G GTYG+VY  + V+TG   AIK+M     ++ E EEE   
Sbjct: 6   IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM-----DVTEDEEE--- 57

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
                I+ E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDLV+  
Sbjct: 58  ----EIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVK-- 111

Query: 130 KKRGVSLSEDQIAYI 144
             +G +L ED IAYI
Sbjct: 112 NTKGNALKEDWIAYI 126

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score =  110 bits (277), Expect = 2e-30
 Identities = 57/143 (39%), Positives = 87/143 (60%), Gaps = 13/143 (9%)

Query: 7   SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEE 66
           S  + ++SL DP + +++ E IG+GTYG+VY   + + G   A+KI++ I     +++EE
Sbjct: 9   SSMLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI----SDVDEE 64

Query: 67  YLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
                   IE EY +L+ L  HPN+  FYG++ +   +    QLW V+ELC GGSVT+LV
Sbjct: 65  --------IEAEYNILQSLPNHPNVVKFYGMFYK-ADKLVGGQLWLVLELCNGGSVTELV 115

Query: 127 QGMKKRGVSLSEDQIAYILYGTV 149
           +G+   G  L E  I+YILYG +
Sbjct: 116 KGLLICGQRLDEAMISYILYGAL 138

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 7e-30
 Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 23/128 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP-ENIEEIEEEYLVLKDLSIE 76
           P+  ++L + IG GTYG+VY A+D+ TG+ VAIK+++  P ++ E I++E  +LK+    
Sbjct: 1   PQEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR-- 58

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPNI +++G YLRR      D+LW VME C GGS+ D+    +     L
Sbjct: 59  -----------HPNIVAYFGSYLRR------DKLWIVMEYCGGGSLQDI---YQVTRGPL 98

Query: 137 SEDQIAYI 144
           SE QIAY+
Sbjct: 99  SELQIAYV 106

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  105 bits (264), Expect = 1e-28
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 23/131 (17%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM-ENIPENIEEIEEEYLVLKDLSIEEEY 79
            F++ E IG+G +GEVY A+   TG  VAIK++     E  E+I  E  +LK        
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK----- 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                   HPNI  +YG YL      ++D+LW VME C+GGS+ DL   +K    +L+E 
Sbjct: 56  --------HPNIVKYYGSYL------KKDELWIVMEFCSGGSLKDL---LKSTNQTLTES 98

Query: 140 QIAYILYGTVQ 150
           QIAY+    ++
Sbjct: 99  QIAYVCKELLK 109

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score =  102 bits (254), Expect = 4e-27
 Identities = 56/130 (43%), Positives = 78/130 (60%), Gaps = 14/130 (10%)

Query: 15  LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           LRDP   F+L EL+G GTYG+VY  + V+TG   AIK+M+   +  EE            
Sbjct: 1   LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------------ 48

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
           I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDL++  K  G 
Sbjct: 49  IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GN 106

Query: 135 SLSEDQIAYI 144
           +L E+ IAYI
Sbjct: 107 TLKEEWIAYI 116

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  100 bits (252), Expect = 7e-27
 Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P   F + E +GEG+YG VY A   ETG  VAIK++  + E+++EI +E  +LK      
Sbjct: 1   PEEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP-VEEDLQEIIKEISILKQ----- 54

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                      P I  +YG Y +         LW VME C  GSV+D+   MK    +L+
Sbjct: 55  --------CDSPYIVKYYGSYFK------NTDLWIVMEYCGAGSVSDI---MKITNKTLT 97

Query: 138 EDQIAYILYGTVQ 150
           E++IA ILY T++
Sbjct: 98  EEEIAAILYQTLK 110

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 92.0 bits (228), Expect = 2e-23
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 28/140 (20%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP-ENIEEIEEEYLVLKD 72
           S R+P+  F+L + IG GTYG+VY A++V TG+  AIK+++  P E+   +++E +++KD
Sbjct: 3   SRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKD 62

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL--VQGMK 130
                          H NI +++G YLRR      D+LW  ME C GGS+ D+  V G  
Sbjct: 63  CK-------------HSNIVAYFGSYLRR------DKLWICMEFCGGGSLQDIYHVTG-- 101

Query: 131 KRGVSLSEDQIAYILYGTVQ 150
                LSE QIAY+   T+Q
Sbjct: 102 ----PLSESQIAYVSRETLQ 117

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 25/127 (19%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           +++ E +GEG++G+VY A+D +TG  VAIK++  + I ++ E I  E  +LK L      
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK----- 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                   HPNI   Y ++       +ED+L+ VME C GG + DL   +KKRG  LSED
Sbjct: 56  --------HPNIVRLYDVFE------DEDKLYLVMEYCEGGDLFDL---LKKRG-RLSED 97

Query: 140 QIAYILY 146
           +  + L 
Sbjct: 98  EARFYLR 104

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 87.7 bits (218), Expect = 9e-22
 Identities = 54/134 (40%), Positives = 67/134 (50%), Gaps = 22/134 (16%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DPR  +K  E IGEG  GEVY A D  TG  VAIK M    +N E I  E L++KD    
Sbjct: 16  DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKD---- 71

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPNI  +Y  YL        D+LW VME   GGS+TD++     R   +
Sbjct: 72  ---------CKHPNIVDYYDSYL------VGDELWVVMEYMDGGSLTDIITQNFVR---M 113

Query: 137 SEDQIAYILYGTVQ 150
           +E QIAY+    +Q
Sbjct: 114 NEPQIAYVCREVLQ 127

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 22/127 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F L E IG+G++GEVY A D  T   VAIK++ ++ E  +EIE+         I++E 
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVI-DLEEAEDEIED---------IQQEI 50

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
             L      P I  +YG +L+        +LW +ME C GGS  DL+    K G  L E 
Sbjct: 51  QFLSQCRS-PYITKYYGSFLKG------SKLWIIMEYCGGGSCLDLL----KPGK-LDET 98

Query: 140 QIAYILY 146
            IA+IL 
Sbjct: 99  YIAFILR 105

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 81.5 bits (202), Expect = 8e-20
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 24/125 (19%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           +GEG +G VY A+D +TG  VAIKI+  E+    +EE+  E  +LK L+           
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN----------- 49

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
             HPNI   YG++       +E+ L+ VME C GGS+ DL   +K+    LSED+I  IL
Sbjct: 50  --HPNIVKLYGVFE------DENHLYLVMEYCEGGSLKDL---LKENEGKLSEDEILRIL 98

Query: 146 YGTVQ 150
              ++
Sbjct: 99  LQILE 103

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 77.8 bits (191), Expect = 5e-18
 Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 28/138 (20%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS- 74
           R+P++ ++L + +G GTYG+VY A+++ TG+  A+KI++  P +            D S 
Sbjct: 5   RNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD------------DFSL 52

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL--VQGMKKR 132
           I++E  ++K+   H NI +++G YL R      ++LW  ME C GGS+ D+  V G    
Sbjct: 53  IQQEIFMVKECK-HCNIVAYFGSYLSR------EKLWICMEYCGGGSLQDIYHVTG---- 101

Query: 133 GVSLSEDQIAYILYGTVQ 150
              LSE QIAY+   T+Q
Sbjct: 102 --PLSELQIAYVCRETLQ 117

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 20/129 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           ++L   +G G++G VY AK   TG  VA+KI+          + +    KD +   E  +
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKIL-----KKRSEKSK----KDQTARREIRI 51

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           L+ LS HPNI      +  +      D L+ VME C GG + D +     RG  LSED+ 
Sbjct: 52  LRRLS-HPNIVRLIDAFEDK------DHLYLVMEYCEGGDLFDYL----SRGGPLSEDEA 100

Query: 142 AYILYGTVQ 150
             I    ++
Sbjct: 101 KKIALQILR 109

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 74.1 bits (183), Expect = 7e-17
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 28/134 (20%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME---NIPENIEEIEEEYLVLKDLSIEE 77
           ++   EL+G G++G VY A D +TG+ +A+K +E   +  E +E +E E  +L  L    
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ--- 57

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPNI  +YG         E++ L   +E  +GGS++ L   +KK G  L 
Sbjct: 58  ----------HPNIVRYYGSER----DEEKNTLNIFLEYVSGGSLSSL---LKKFG-KLP 99

Query: 138 EDQIAY----ILYG 147
           E  I      IL G
Sbjct: 100 EPVIRKYTRQILEG 113

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 72.8 bits (179), Expect = 3e-16
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 22/133 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLSIEE 77
           + ++L E+IG G    VY A  +   + VAIK   +E    +++E+ +E   ++ +S   
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKE---VQAMS--- 54

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPN+  +Y  ++        D+LW VM   +GGS+ D+++    RG  L 
Sbjct: 55  -------QCNHPNVVKYYTSFV------VGDELWLVMPYLSGGSLLDIMKSSYPRGG-LD 100

Query: 138 EDQIAYILYGTVQ 150
           E  IA +L   ++
Sbjct: 101 EAIIATVLKEVLK 113

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 73.0 bits (180), Expect = 3e-16
 Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 21/130 (16%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           +K+ + +G+GT+G VY A++ ETG+ VAIK M+    +     EE + L+      E   
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----EECMNLR------EVKS 50

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-GVSLSEDQ 140
           L+ L+ HPNI     ++       E D+L+FV E   G    +L Q MK R G   SE  
Sbjct: 51  LRKLNEHPNIVKLKEVFR------ENDELYFVFEYMEG----NLYQLMKDRKGKPFSESV 100

Query: 141 IAYILYGTVQ 150
           I  I+Y  +Q
Sbjct: 101 IRSIIYQILQ 110

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 70.4 bits (173), Expect = 2e-15
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 27/128 (21%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENI---PENIEEIEEEYLVLKDLSIEE 77
            ++L +LIG G +G VY   ++ETGD VAIK +       E ++ I +E  +LK+L    
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK--- 57

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPNI  + G           D L+ ++E    GS+  ++   KK G    
Sbjct: 58  ----------HPNIVKYIGSI------ETSDSLYIILEYAENGSLRQII---KKFG-PFP 97

Query: 138 EDQIA-YI 144
           E  +A Y+
Sbjct: 98  ESLVAVYV 105

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 70.3 bits (173), Expect = 2e-15
 Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 24/129 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMEN---IPENIEEIEEEYLVLKDLSIE 76
           + FK  ++IGEG++  V  AK+ ET    AIKI++    I E            K + IE
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKV---------KYVKIE 51

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E  VL  L+ HP I   Y  +     Q +E+ L+FV+E    G   +L+Q ++K G SL
Sbjct: 52  KE--VLTRLNGHPGIIKLYYTF-----Q-DEENLYFVLEYAPNG---ELLQYIRKYG-SL 99

Query: 137 SEDQIAYIL 145
            E    +  
Sbjct: 100 DEKCTRFYA 108

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 69.8 bits (172), Expect = 3e-15
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 24/129 (18%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENI----PENIEEIEEEYLVLKDLSIE 76
           K+++ + IG+G++G+VY  +    G    +K + ++     +  E+   E  +LK L+  
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEI-DLSNMSEKEREDALNEVKILKKLN-- 57

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPNI  +Y  +       E+ +L  VME   GG ++  ++  KK G   
Sbjct: 58  -----------HPNIIKYYESFE------EKGKLCIVMEYADGGDLSQKIKKQKKEGKPF 100

Query: 137 SEDQIAYIL 145
            E+QI    
Sbjct: 101 PEEQILDWF 109

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 69.1 bits (170), Expect = 5e-15
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 28/131 (21%)

Query: 22  FKLQELIGEGTYGEVY--WAKDVETGD--HVAIKIMENI--PENIEEIEEEYLVLKDLSI 75
            +L + +GEG +GEVY    K    G    VA+K ++     E  EE  EE  ++K LS 
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS- 59

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HPNI    G+        + + L+ V E   GG   DL+  ++K G  
Sbjct: 60  ------------HPNIVRLLGVCT------QGEPLYIVTEYMPGG---DLLDFLRKHGEK 98

Query: 136 LSEDQIAYILY 146
           L+   +  +  
Sbjct: 99  LTLKDLLQMAL 109

Length = 258

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 69.4 bits (170), Expect = 7e-15
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 23/128 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DPR+       IGEG+ G V  A D  TG  VA+K M     ++ + +   L+  ++ I 
Sbjct: 16  DPRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKM-----DLRKQQRRELLFNEVVIM 70

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        HPNI   Y  YL        D+LW VME   GG++TD+V   +     +
Sbjct: 71  RDY-------QHPNIVEMYSSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 112

Query: 137 SEDQIAYI 144
           +E+QIA +
Sbjct: 113 NEEQIATV 120

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 69.1 bits (169), Expect = 1e-14
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 27/138 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVLKD 72
           DP   F     IG G++G VY+A+DV T + VAIK M    +   E  ++I +E   L+ 
Sbjct: 12  DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQ 71

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              HPN   + G YLR      E   W VME C  GS +D+++  KK 
Sbjct: 72  L-------------RHPNTIEYKGCYLR------EHTAWLVMEYCL-GSASDILEVHKK- 110

Query: 133 GVSLSEDQIAYILYGTVQ 150
              L E +IA I +G +Q
Sbjct: 111 --PLQEVEIAAICHGALQ 126

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 20/125 (16%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           ++  E +GEGTYG VY A+D +TG+ VA+K +    E  E I    L         E  +
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EGIPSTAL--------REISL 51

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           LK+L  HPNI     +         E +L+ V E C      DL + + KR   LS + I
Sbjct: 52  LKELK-HPNIVKLLDVIH------TERKLYLVFEYCD----MDLKKYLDKRPGPLSPNLI 100

Query: 142 AYILY 146
             I+Y
Sbjct: 101 KSIMY 105

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 66.9 bits (163), Expect = 5e-14
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 18/121 (14%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           L +   I S+ DP+ K+   E IG+G  G VY A DV TG  VAIK M     N+++  +
Sbjct: 5   LEKLRTIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQM-----NLQQQPK 59

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           + L++       E LV+++   HPNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 60  KELIIN------EILVMRENK-HPNIVNYLDSYL------VGDELWVVMEYLAGGSLTDV 106

Query: 126 V 126
           V
Sbjct: 107 V 107

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 7e-14
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 21/134 (15%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           +P + +++   +G+G +G+VY A+  ETG   A KI++     IE  EE    L+D  +E
Sbjct: 2   NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQ-----IESEEE----LEDFMVE 52

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            + L       HPNI   Y  Y        E++LW ++E C GG++  +   M +    L
Sbjct: 53  IDILSECK---HPNIVGLYEAYFY------ENKLWILIEFCDGGALDSI---MLELERGL 100

Query: 137 SEDQIAYILYGTVQ 150
           +E QI Y+    ++
Sbjct: 101 TEPQIRYVCRQMLE 114

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 66.1 bits (161), Expect = 7e-14
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 18/121 (14%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++++ + IGEG++G++Y AK     +H  IK          EI+   + +K+    ++ +
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIK----------EIDLTKMPVKEKEASKKEV 50

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L     HPNI +F+  +       E  +L+ VME C GG +   +   ++RGV  SEDQ
Sbjct: 51  ILLAKMKHPNIVTFFASF------QENGRLFIVMEYCDGGDLMKRIN--RQRGVLFSEDQ 102

Query: 141 I 141
           I
Sbjct: 103 I 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 65.1 bits (159), Expect = 2e-13
 Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 22/104 (21%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIM---ENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
           IG GT+G+VY A +++TG+ +A+K +   +N P+ I+EI +E  VL+ L           
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK---------- 57

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG 128
              HPN+  +YG+ + R      ++++  ME C+GG++ +L++ 
Sbjct: 58  ---HPNLVKYYGVEVHR------EKVYIFMEYCSGGTLEELLEH 92

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 65.1 bits (157), Expect = 4e-13
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            +++   +GEG++GEVY A+D +    VA+K++    E+  +  E            E  
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVE--------RFLREIQ 49

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L  L+  PNI   Y  +       +E  L+ VME   GGS+ DL++    R   LSE +
Sbjct: 50  ILASLNHPPNIVKLYDFF------QDEGSLYLVMEYVDGGSLEDLLK-KIGRKGPLSESE 102

Query: 141 IAYILY 146
             +IL 
Sbjct: 103 ALFILA 108

Length = 384

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 20/123 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           IGEGTYG VY A+D  TG+ VAIK    I    E        L+++ +      LK+L+ 
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIK---KIKLRFESEGIPKTALREIKL------LKELN- 56

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG 147
           HPNI     ++        +  L+ V E       TDL + +K R   L E  I   LY 
Sbjct: 57  HPNIIKLLDVF------RHKGDLYLVFEFMD----TDLYKLIKDRQRGLPESLIKSYLYQ 106

Query: 148 TVQ 150
            +Q
Sbjct: 107 LLQ 109

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 62.0 bits (150), Expect = 3e-12
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 23/145 (15%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           L +  +I S+ DP+ K+   E IG+G  G VY A D+ TG  VAIK M     N+++  +
Sbjct: 5   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQM-----NLQQQPK 59

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           + L++       E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 60  KELIIN------EILVMRE-NKNPNIVNYLDSYL------VGDELWVVMEYLAGGSLTDV 106

Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQ 150
           V         + E QIA +    +Q
Sbjct: 107 VT-----ETCMDEGQIAAVCRECLQ 126

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 61.7 bits (149), Expect = 4e-12
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 23/145 (15%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           L +  +I S+ DP+ K+   E IG+G  G VY A DV TG  VAI+ M     N+++  +
Sbjct: 6   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-----NLQQQPK 60

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           + L++       E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 61  KELIIN------EILVMRE-NKNPNIVNYLDSYL------VGDELWVVMEYLAGGSLTDV 107

Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQ 150
           V         + E QIA +    +Q
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQ 127

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 60.4 bits (146), Expect = 1e-11
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 27/138 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVLKD 72
           DP   F     IG G++G VY+A+DV   + VAIK M    +   E  ++I +E   L+ 
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              HPN   + G YLR      E   W VME C  GS +DL++  KK 
Sbjct: 72  LR-------------HPNTIQYRGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK- 110

Query: 133 GVSLSEDQIAYILYGTVQ 150
              L E +IA + +G +Q
Sbjct: 111 --PLQEVEIAAVTHGALQ 126

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 23/126 (18%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPEN-IEEIEEEYLVLKDLSIEEEY 79
           ++  ELIG G YG VY  K V TG  VA+KI+  + P++ + +I+ E  +L  L      
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLR----- 57

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                 S  PNI  +YG YL      +  +LW +ME   GGSV  L+     +   ++E 
Sbjct: 58  -----QSQPPNITKYYGSYL------KGPRLWIIMEYAEGGSVRTLM-----KAGPIAEK 101

Query: 140 QIAYIL 145
            I+ I+
Sbjct: 102 YISVII 107

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 60.1 bits (145), Expect = 2e-11
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 27/138 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVLKD 72
           DP   F     IG G++G VY+A+DV T + VAIK M    +   E  ++I +E   L+ 
Sbjct: 22  DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR 81

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           +              HPN   + G YLR      E   W VME C  GS +DL++  KK 
Sbjct: 82  IK-------------HPNSIEYKGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK- 120

Query: 133 GVSLSEDQIAYILYGTVQ 150
              L E +IA I +G +Q
Sbjct: 121 --PLQEVEIAAITHGALQ 136

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 58.6 bits (141), Expect = 6e-11
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 23/139 (16%)

Query: 12  IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLK 71
           I S+ DP+ K+   E IG+G  G V+ A DV TG  VAIK +     N+++  ++ L++ 
Sbjct: 11  IVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQI-----NLQKQPKKELIIN 65

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
                 E LV+K+L  +PNI +F   +L        D+L+ VME   GGS+TD+V     
Sbjct: 66  ------EILVMKELK-NPNIVNFLDSFL------VGDELFVVMEYLAGGSLTDVVT---- 108

Query: 132 RGVSLSEDQIAYILYGTVQ 150
               + E QIA +    +Q
Sbjct: 109 -ETCMDEAQIAAVCRECLQ 126

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 57.8 bits (140), Expect = 8e-11
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 29/128 (22%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN------IEEIEEEYLVLKDLS 74
           +++  EL+G G++G VY   +++ GD  A+K +    +       ++++E+E  +L  L 
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HPNI  + G       + EED L+  +EL  GGS+  L   +KK G 
Sbjct: 61  -------------HPNIVQYLGT------EREEDNLYIFLELVPGGSLAKL---LKKYG- 97

Query: 135 SLSEDQIA 142
           S  E  I 
Sbjct: 98  SFPEPVIR 105

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 57.8 bits (139), Expect = 1e-10
 Identities = 45/131 (34%), Positives = 62/131 (47%), Gaps = 26/131 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLS 74
           DP   F   E IG+G++GEV+   D  T   VAIKI  +E   + IE+I++E  VL    
Sbjct: 1   DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                         P +  +YG YL+      + +LW +ME   GGS  DL++       
Sbjct: 61  -------------SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG----- 96

Query: 135 SLSEDQIAYIL 145
            L E QIA IL
Sbjct: 97  PLDETQIATIL 107

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 48/131 (36%), Positives = 62/131 (47%), Gaps = 26/131 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLS 74
           DP   F   E IG+G++GEVY   D  T + VAIKI  +E   + IE+I++E  VL    
Sbjct: 1   DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                         P I  +YG YL+        +LW +ME   GGS  DL+    K G 
Sbjct: 61  -------------SPYITRYYGSYLK------GTKLWIIMEYLGGGSALDLL----KPG- 96

Query: 135 SLSEDQIAYIL 145
            L E  IA IL
Sbjct: 97  PLEETYIATIL 107

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 55.8 bits (134), Expect = 5e-10
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 26/131 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLS 74
           DP   F   E IG+G++GEV+   D  T   VAIKI  +E   + IE+I++E  VL    
Sbjct: 1   DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                         P +  +YG YL+        +LW +ME   GGS  DL+     R  
Sbjct: 61  -------------SPYVTKYYGSYLK------GTKLWIIMEYLGGGSALDLL-----RAG 96

Query: 135 SLSEDQIAYIL 145
              E QIA +L
Sbjct: 97  PFDEFQIATML 107

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 55.8 bits (134), Expect = 5e-10
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 27/138 (19%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVLKD 72
           DP   F     IG G++G VY+A +  T + VA+K M    +   E  ++I +E   L+ 
Sbjct: 18  DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ 77

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              HPN   + G YL+      E   W VME C  GS +DL++  KK 
Sbjct: 78  LK-------------HPNTIEYKGCYLK------EHTAWLVMEYCL-GSASDLLEVHKK- 116

Query: 133 GVSLSEDQIAYILYGTVQ 150
              L E +IA I +G +Q
Sbjct: 117 --PLQEVEIAAITHGALQ 132

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 55.6 bits (135), Expect = 6e-10
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 25/122 (20%)

Query: 23  KLQELIGEGTYGEVYWAK----DVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIE 76
            L + +GEG +GEVY              VA+K +  +   + IEE   E  +++ L   
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD-- 59

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPNI    G+        EE+ L  VME   GG + D ++  + + +SL
Sbjct: 60  -----------HPNIVKLLGVCT------EEEPLMIVMEYMPGGDLLDYLRKNRPKELSL 102

Query: 137 SE 138
           S+
Sbjct: 103 SD 104

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 16/98 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           NK+++  ++GEG YG V   ++  TG+ VAIK  +   ++ E++++        +   E 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKK--------TALREV 51

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELC 117
            VL+ L  H NI +    + R+G      +L+ V E  
Sbjct: 52  KVLRQLR-HENIVNLKEAFRRKG------RLYLVFEYV 82

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 53.7 bits (130), Expect = 3e-09
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 28/130 (21%)

Query: 23  KLQELIGEGTYGEVYWAKDVETGDH----VAIKIM--ENIPENIEEIEEEYLVLKDLSIE 76
            L + +GEG +GEVY  K    G      VA+K +  +   + IEE   E  +++ L   
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD-- 59

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPN+    G+        EE+ L+ VME   GG   DL+  ++K    L
Sbjct: 60  -----------HPNVVKLLGVCT------EEEPLYIVMEYMEGG---DLLSYLRKNRPKL 99

Query: 137 SEDQIAYILY 146
           S   +     
Sbjct: 100 SLSDLLSFAL 109

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 53.4 bits (129), Expect = 3e-09
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 14/125 (11%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            +++ E IG+G++G V   +    G  +  K ++    N+ E E++ LV        E  
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDY--GNMTEKEKQQLV-------SEVN 51

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L++L  HPNI  +Y   + R  Q     L+ VME C GG +  L+Q  KK    + E+ 
Sbjct: 52  ILRELK-HPNIVRYYDRIIDRSNQ----TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEF 106

Query: 141 IAYIL 145
           I  IL
Sbjct: 107 IWRIL 111

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 52.7 bits (126), Expect = 6e-09
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P N ++L +L+G+G +G VY   D +TG  +A+K ++  PE+ E  +E        ++E 
Sbjct: 1   PTN-WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVN------ALEC 53

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
           E  +LK+L +H  I  +YG  LR    P E  L   ME   GGS+ D
Sbjct: 54  EIQLLKNL-LHERIVQYYG-CLR---DPMERTLSIFMEHMPGGSIKD 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           ELIG+GTYG VY A +V TG+ +A+K +E +P  I    +        ++  E   LKDL
Sbjct: 7   ELIGKGTYGRVYLALNVTTGEMMAVKQVE-LPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
             H NI  + G       +  E+ L   +E   GGS+
Sbjct: 66  D-HLNIVQYLGF------ETTEEYLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             ++  +L+G+G +G VY   DV+TG  +A+K +   P++ E  +E        ++E E 
Sbjct: 2   TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVN------ALECEI 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
            +LK+L  H  I  +YG         +++ L   ME   GGSV D
Sbjct: 56  QLLKNLQ-HERIVQYYGC------LRDDETLSIFMEYMPGGSVKD 93

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 20/123 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           +G G  G V       TG  +A+K    I   I E  ++ + L++L I  +         
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKT---IRLEINEAIQKQI-LRELDILHK-------CN 57

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG 147
            P I  FYG +   G       +   ME   GGS+  +++ ++ R   + E  +  I   
Sbjct: 58  SPYIVGFYGAFYNNG------DISICMEYMDGGSLDKILKEVQGR---IPERILGKIAVA 108

Query: 148 TVQ 150
            ++
Sbjct: 109 VLK 111

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 32/134 (23%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE-------EIEEEYLVLKDL 73
           +++L + IG G YG V  A D  TG  VAIK + N+ +++        EI+    +L+ L
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIK----LLRHL 56

Query: 74  SIEEEYLV-LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
               E ++ L D+   P+   F  +Y+             V EL      TDL + + K 
Sbjct: 57  --RHENIIGLLDILRPPSPEDFNDVYI-------------VTELME----TDLHK-VIKS 96

Query: 133 GVSLSEDQIAYILY 146
              L++D I Y LY
Sbjct: 97  PQPLTDDHIQYFLY 110

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 23/134 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DPR+  +    IGEG+ G V  A++  +G  VA+K+M+     + + +   L+  ++ I 
Sbjct: 18  DPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMD-----LRKQQRRELLFNEVVIM 72

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        ++LW +ME   GG++TD+V   +     L
Sbjct: 73  RDYQ-------HQNVVEMYKSYL------VGEELWVLMEFLQGGALTDIVSQTR-----L 114

Query: 137 SEDQIAYILYGTVQ 150
           +E+QIA +    +Q
Sbjct: 115 NEEQIATVCESVLQ 128

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 20/120 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           IGEGT+ EV  A+  +TG + AIK M+   +++E++         L    E   L+ LS 
Sbjct: 7   IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN-------LR---EIQALRRLSP 56

Query: 88  HPNIPSFYG-LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
           HPNI      L+ R+ G     +L  V EL    ++ +L   +K R   L E ++   +Y
Sbjct: 57  HPNILRLIEVLFDRKTG-----RLALVFEL-MDMNLYEL---IKGRKRPLPEKRVKSYMY 107

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 49.6 bits (118), Expect = 8e-08
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 21/128 (16%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DP   +++   +G+G +G+VY AK+ ETG   A K++E   ++ EE+E       D  +E
Sbjct: 9   DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELE-------DYMVE 59

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E L   +   HP I    G +   G      +LW ++E C GG+V D +     RG  L
Sbjct: 60  IEILATCN---HPYIVKLLGAFYWDG------KLWIMIEFCPGGAV-DAIMLELDRG--L 107

Query: 137 SEDQIAYI 144
           +E QI  I
Sbjct: 108 TEPQIQVI 115

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 49.3 bits (117), Expect = 9e-08
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 23/128 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DPR        IGEG+ G V  A +  TG  VA+K M+     + + +   L+  ++ I 
Sbjct: 19  DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMD-----LRKQQRRELLFNEVVIM 73

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        D+LW VME   GG++TD+V   +     +
Sbjct: 74  RDYH-------HENVVDMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 115

Query: 137 SEDQIAYI 144
           +E+QIA +
Sbjct: 116 NEEQIATV 123

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 26/118 (22%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIK---IMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
           IGEG++G+    K  E G    IK   I +  P+  EE  +E  VL ++           
Sbjct: 8   IGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK---------- 57

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM-KKRGVSLSEDQI 141
              HPNI  +   +   G       L+ VM+ C GG   DL + +  +RGV   EDQI
Sbjct: 58  ---HPNIVQYQESFEENG------NLYIVMDYCEGG---DLYKKINAQRGVLFPEDQI 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 13/121 (10%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++ LQ+ +G+G++G VY  KD +      +K+++ IP  + E+     V  +     E  
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIP--VGELNPNETVQANQ----EAQ 54

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L  L  HP I  F+  +L      E D    + E C G  +   ++ +K  G +LSE+Q
Sbjct: 55  LLSKLD-HPAIVKFHASFL------ERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQ 107

Query: 141 I 141
           +
Sbjct: 108 V 108

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 20/99 (20%)

Query: 26  ELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL 82
           + +GEG +GEVY             VA+K ++      E  +            +E  V+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKD----------FLKEARVM 50

Query: 83  KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
           K L  HPN+    G+        EE+ L+ V+E   GG 
Sbjct: 51  KKLG-HPNVVRLLGVCT------EEEPLYLVLEYMEGGD 82

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 21/119 (17%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           +G+G+ G VY  +   TG   A+K    I  + +E E    +L++L        L+    
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKK---IHVDGDE-EFRKQLLRELKT------LRS-CE 57

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
            P +   YG + + G      ++  V+E   GGS+ DL++ + K    + E  +AYI  
Sbjct: 58  SPYVVKCYGAFYKEG------EISIVLEYMDGGSLADLLKKVGK----IPEPVLAYIAR 106

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 32/144 (22%)

Query: 11  NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENI---------PENIE 61
           +I      +        +GEGTYG+V  A D  TG  VAIK ++ I          + + 
Sbjct: 5   SISERYIQKGAH-----LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVG 59

Query: 62  EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                +  L++L I      + ++  H NI     +Y+      E D +  VM++     
Sbjct: 60  MCGIHFTTLRELKI------MNEIK-HENIMGLVDVYV------EGDFINLVMDIMAS-- 104

Query: 122 VTDLVQGMKKRGVSLSEDQIAYIL 145
             DL + + ++ + L+E Q+  IL
Sbjct: 105 --DLKKVVDRK-IRLTESQVKCIL 125

Length = 335

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 2/36 (5%)

Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMEN 55
          ++    IGEGTYG+VY A++ +TG+ VA+K   MEN
Sbjct: 1  YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN 36

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (111), Expect = 6e-07
 Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P N ++L +L+G G +GEVY   D +TG  +A+K +   P++ E  +E        ++E 
Sbjct: 1   PVN-WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVN------ALEC 53

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
           E  +LK+L  H  I  +YG  LR    PEE +L   +E   GGS+ D
Sbjct: 54  EIQLLKNLR-HDRIVQYYGC-LR---DPEEKKLSIFVEYMPGGSIKD 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 18/42 (42%), Positives = 31/42 (73%)

Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE 62
          ++K+QE+IG+G+YG V  A D  TG+ VAIK + ++ E++ +
Sbjct: 1  RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSD 42

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.7 bits (112), Expect = 6e-07
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 19/114 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           +G+G++G+V   +  +TG   A+K+++      ++I +   V        E  +L  ++ 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKK-----KKIIKRKEV---EHTLTERNILSRIN- 51

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           HP I       L    Q  E++L+ V+E   GG   +L   + K G   SE++ 
Sbjct: 52  HPFIVK-----LHYAFQ-TEEKLYLVLEYAPGG---ELFSHLSKEG-RFSEERA 95

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 47.0 bits (111), Expect = 7e-07
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           +L+G+G +G VY   DV+TG  +A K ++  PE+ E  +E        ++E E  +LK+L
Sbjct: 8   KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVS------ALECEIQLLKNL 61

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
             H  I  +YG    R     E  L   ME   GGSV D ++       S++      IL
Sbjct: 62  Q-HERIVQYYGCLRDRA----EKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQIL 116

Query: 146 YG 147
            G
Sbjct: 117 EG 118

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 46.9 bits (111), Expect = 7e-07
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 23/134 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DPR        IGEG+ G V  A    +G  VA+K M+     + + +   L+  ++ I 
Sbjct: 17  DPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMD-----LRKQQRRELLFNEVVIM 71

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        D+LW VME   GG++TD+V   +     +
Sbjct: 72  RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 113

Query: 137 SEDQIAYILYGTVQ 150
           +E+QIA +    ++
Sbjct: 114 NEEQIAAVCLAVLK 127

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 27  LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS 86
           LIG G++G VY   +  +G+ +A+K +E +P      ++    + D ++  E  +LK+L 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVE-LPSVSASSKDRKRSMLD-ALAREIALLKELQ 64

Query: 87  VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
            H NI  + G  L      + D L   +E   GGSV  L+
Sbjct: 65  -HENIVQYLGSSL------DADHLNIFLEYVPGGSVAALL 97

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 18/121 (14%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           K++   ++G G +G V+  +       V IK +      +E++ ++    + L+ + E  
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQI-----PVEQMTKD----ERLAAQNECQ 51

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           VLK LS HPNI  +Y  +L      E+  L  VME   GG++ + +Q  K+    L ED 
Sbjct: 52  VLKLLS-HPNIIEYYENFL------EDKALMIVMEYAPGGTLAEYIQ--KRCNSLLDEDT 102

Query: 141 I 141
           I
Sbjct: 103 I 103

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 34/128 (26%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM------ENIPEN-IEEIEEEYLVLKDL 73
           ++K+   IGEG +G V+ AKD ETG+ VA+K +        IP   + EI      L+  
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREI----KALQ-- 54

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
           + +  Y+V K L V P+   F                  VME       +DL + ++   
Sbjct: 55  ACQHPYVV-KLLDVFPHGSGFV----------------LVMEYMP----SDLSEVLRDEE 93

Query: 134 VSLSEDQI 141
             L E Q+
Sbjct: 94  RPLPEAQV 101

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 17/120 (14%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           FK  +L+G+G  G V+  +   TG   A+K+++      +E+ +   V K +  E+E L 
Sbjct: 3   FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDK-----KEMIKRNKV-KRVLTEQEILA 56

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
             D   HP +P+ Y  +        E  L  VM+ C GG +  L+Q  ++ G  LSE+  
Sbjct: 57  TLD---HPFLPTLYASF------QTETYLCLVMDYCPGGELFRLLQ--RQPGKCLSEEVA 105

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMEN 55
          D  +K++    IG+GT+GEV+ A+  +T   VA+K  +MEN
Sbjct: 9  DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMEN 49

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 21/134 (15%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           +P   +++   +G+G +G+VY A++ ETG   A K+++       + EEE   L+D  +E
Sbjct: 2   NPEEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDT------KSEEE---LEDYMVE 52

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            + L   D   HPNI      +        E+ LW ++E C GG+V  ++  +++    L
Sbjct: 53  IDILASCD---HPNIVKLLDAFYY------ENNLWILIEFCAGGAVDAVMLELER---PL 100

Query: 137 SEDQIAYILYGTVQ 150
           +E QI  +   T++
Sbjct: 101 TEPQIRVVCKQTLE 114

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           +++  + +GEGTY  VY A+D ETG  VAIK ++          +E     + +   E  
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGE------RKEAKDGINFTALREIK 54

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L++L  HPNI     ++        +  +  V E       TDL + +K + + L+   
Sbjct: 55  LLQELK-HPNIIGLLDVF------GHKSNINLVFEFME----TDLEKVIKDKSIVLTPAD 103

Query: 141 I-AYIL 145
           I +Y+L
Sbjct: 104 IKSYML 109

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 44.0 bits (104), Expect = 7e-06
 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 17/102 (16%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS-IEEEYL 80
           F++ E +G G++G V  AK   TG++ AIK ++         + E L +K +  + +E  
Sbjct: 20  FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLK---------KREILKMKQVQHVAQEKS 70

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
           +L +LS HP I +    +       +E++++F++E   GG +
Sbjct: 71  ILMELS-HPFIVNMMCSFQ------DENRVYFLLEFVVGGEL 105

Length = 329

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 20/102 (19%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           ++    IGEG YG VY A+D+ TG  VA+K +  +P + E I         LS   E  +
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKV-RVPLSEEGIP--------LSTLREIAL 51

Query: 82  LKDL--SVHPNIPS----FYGLYLRRGGQPEEDQLWFVMELC 117
           LK L    HPNI       +G    R     E +L  V E  
Sbjct: 52  LKQLESFEHPNIVRLLDVCHGPRTDR-----ELKLTLVFEHV 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 43.6 bits (103), Expect = 9e-06
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 24/77 (31%)

Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKI------MENIPEN-IEEIEEEYLVLKDLS 74
          F+  E IGEGTYG VY A++  TG+ VA+K        E +P   I EI     +LK+L+
Sbjct: 2  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKELN 57

Query: 75 IEEEYLVLKDLSVHPNI 91
                       HPNI
Sbjct: 58 -------------HPNI 61

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 21/122 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI---MENIPENIEEIEEEYLVLKDLSIE 76
            K      +GEG  G V   +   TG   A+K      N P+  ++I  E  + K     
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCK-- 57

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                       P I  +YG +L          +   ME C GGS+  + + +KKRG  +
Sbjct: 58  -----------SPYIVKYYGAFL----DESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRI 102

Query: 137 SE 138
            E
Sbjct: 103 GE 104

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 16/125 (12%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETG-DHVAIK-IMENIPENIEEIEEEYLVLKDLSIEE-- 77
           + + E +G G +G VY  +    G + +A+K I  + P   ++  E     +D SI +  
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRE-----RDKSIGDIV 56

Query: 78  -EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E  ++K+   HPNI  +Y  +L      E D+L+ VM+L  G  + +    +K++    
Sbjct: 57  SEVTIIKEQLRHPNIVRYYKTFL------ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRF 110

Query: 137 SEDQI 141
           +E++I
Sbjct: 111 TEERI 115

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 13/102 (12%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           E++G+G YG VY       G  +A+K +E    N+   E+EY  L     +EE  +LK L
Sbjct: 6   EVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKL-----QEEVDLLKSL 59

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
             H NI  + G  L      +++ +   ME   GGS++ ++ 
Sbjct: 60  K-HVNIVQYLGTCL------DDNTISIFMEFVPGGSISSILN 94

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 20/129 (15%)

Query: 24  LQELIGEGTYGE--VYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           L  LIG+       V+ AK   T   VA+K +     N++   +E L L    +++E + 
Sbjct: 2   LLTLIGKCFEDLMIVHLAKHKPTNTLVAVKKI-----NLDSCSKEDLKL----LQQEIIT 52

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
            + L  HPNI  +   ++       + +L+ V  L   GS  DL++     G  L E  I
Sbjct: 53  SRQLQ-HPNILPYVTSFI------VDSELYVVSPLMAYGSCEDLLKTHFPEG--LPELAI 103

Query: 142 AYILYGTVQ 150
           A+IL   + 
Sbjct: 104 AFILKDVLN 112

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 20/121 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI--EEEYLVLKDL 85
           IG G YG V  AK+ ET + VAIK + N  +N  + +     +K L     E  + +KD+
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
              P+  +F  +Y+             V EL      TDL Q + +   +LS+D   Y L
Sbjct: 73  MPPPHREAFNDVYI-------------VYELMD----TDLHQ-IIRSSQTLSDDHCQYFL 114

Query: 146 Y 146
           Y
Sbjct: 115 Y 115

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 18/120 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           F++   IG+G++G V+           A+K ++    N  E EE           +E  V
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAI---------DEARV 52

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           L  L     I  +Y  +L +G      +L  VME    G +  L++   +RG  L EDQ+
Sbjct: 53  LAKLD-SSYIIRYYESFLDKG------KLNIVMEYAENGDLHKLLK--MQRGRPLPEDQV 103

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 15/99 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
            +  + +G GT+G V+  +D  +  + A+K+M  IPE I   +E++       +  E  V
Sbjct: 3   LERIKTVGTGTFGRVHLVRDRISEHYYALKVM-AIPEVIRLKQEQH-------VHNEKRV 54

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           LK++S HP I   +        + ++  L+ +ME   GG
Sbjct: 55  LKEVS-HPFIIRLF------WTEHDQRFLYMLMEYVPGG 86

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 24/77 (31%)

Query: 26 ELIGEGTYGEVYWAKDVETGDHVAIKIM------ENIPEN-IEEIEEEYLVLKDLSIEEE 78
          E IGEGTYG VY A+D  TG+ VA+K +      E +P   I EI     +LK+L+    
Sbjct: 5  EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREIS----LLKELN---- 56

Query: 79 YLVLKDLSVHPNIPSFY 95
                   HPNI    
Sbjct: 57 ---------HPNIVRLL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 25/107 (23%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMEN--IPENIEEIEEEYLVLKDL 73
           R    L   IGEG +G+VY    +   +    VA+K  +N   P   E+  +E  +++  
Sbjct: 5   REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF 64

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                         HP+I    G+         E+ +W VMEL   G
Sbjct: 65  D-------------HPHIVKLIGVI-------TENPVWIVMELAPLG 91

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 24/95 (25%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           IGEGTYG VY A+D  +G+ VA+K   M+N  + I            +S   E  +L +L
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIP-----------ISSLREITLLLNL 63

Query: 86  SVHPNIPSFYGLYLRR---GGQPEEDQLWFVMELC 117
             HPNI     + L+    G     D ++ VME C
Sbjct: 64  R-HPNI-----VELKEVVVGKH--LDSIFLVMEYC 90

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 18/32 (56%), Positives = 25/32 (78%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK 51
          +KF +   IGEGTYG+VY A+D +TG+ VA+K
Sbjct: 7  DKFDIIGQIGEGTYGQVYKARDKDTGELVALK 38

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 15/122 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             FK+++ IG+G +  VY A  +  G  VA+K ++ I E ++    +  +       +E 
Sbjct: 2   GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQ-IFEMMDAKARQDCL-------KEI 53

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK L  HPN+  +   ++      E ++L  V+EL   G ++ +++  KK+   + E 
Sbjct: 54  DLLKQLD-HPNVIKYLASFI------ENNELNIVLELADAGDLSRMIKHFKKQKRLIPER 106

Query: 140 QI 141
            I
Sbjct: 107 TI 108

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 20/123 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           IGEG+YG V+  ++ ETG  VAIK          E E++  V+K +++ E  + LK L  
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIK-------KFVESEDD-PVIKKIALREIRM-LKQLK- 58

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG 147
           HPN+ +   ++ R+       +L  V E C    + +L +  +     + E  I  I++ 
Sbjct: 59  HPNLVNLIEVFRRK------RKLHLVFEYCDHTVLNELEKNPRG----VPEHLIKKIIWQ 108

Query: 148 TVQ 150
           T+Q
Sbjct: 109 TLQ 111

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 18/125 (14%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           ++    IGEG YG V  A    TG  VAIK        I   E +    + L    E  +
Sbjct: 7   YQNLSYIGEGAYGMVCSATHKPTGVKVAIK-------KISPFEHQTFCQRTL---REIKI 56

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           L+    H NI     + +R       + ++ V EL      TDL + +K +   LS D I
Sbjct: 57  LRRFK-HENIIGILDI-IRPPSFESFNDVYIVQELME----TDLYKLIKTQ--HLSNDHI 108

Query: 142 AYILY 146
            Y LY
Sbjct: 109 QYFLY 113

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 28/103 (27%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM------ENIPENIEEIEEEYLVLKDLS 74
           K++  E IGEGTYG V+ AK+ ET + VA+K +      E +P +          L+++ 
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS---------ALREIC 51

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELC 117
           +      LK+L  H NI   Y +         + +L  V E C
Sbjct: 52  L------LKELK-HKNIVRLYDVLH------SDKKLTLVFEYC 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK 51
          + ++  E IGEGTYG+VY A+D  TG  VA+K
Sbjct: 1  DAYEKLEKIGEGTYGKVYKARDKNTGKLVALK 32

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM 53
            F++   +G+G YG+V+ AK  +TG+ VA+K M
Sbjct: 1  KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRM 34

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 17/126 (13%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++K  E IG G YG V  A D  +G  VAIK    IP   +        L++L I   + 
Sbjct: 6   RYKPIENIGSGAYGVVCSAIDTRSGKKVAIK---KIPHAFDVPTLAKRTLRELKILRHFK 62

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
                  H NI +     + R    +   ++ VM+L      +DL   +      L+E+ 
Sbjct: 63  -------HDNIIAI--RDILRPPGADFKDVYVVMDLME----SDLHHIIHSDQ-PLTEEH 108

Query: 141 IAYILY 146
           I Y LY
Sbjct: 109 IRYFLY 114

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 28/127 (22%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           +G+G +GE    +  E    V  K          E+      L  LS +E    L ++ +
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWK----------EVN-----LTRLSEKERRDALNEIVI 52

Query: 88  -----HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIA 142
                HPNI ++Y  ++      +++ L   ME   GG++ D +  ++++G    E+ + 
Sbjct: 53  LSLLQHPNIIAYYNHFM------DDNTLLIEMEYANGGTLYDKI--VRQKGQLFEEEMVL 104

Query: 143 YILYGTV 149
           + L+  V
Sbjct: 105 WYLFQIV 111

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 15/99 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           F+  + +G G++G V   +   +G + A+KI+ +  + ++  + E+       +  E  +
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKIL-SKAKIVKLKQVEH-------VLNEKRI 54

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           L+ +  HP + + YG +       ++  L+ VME   GG
Sbjct: 55  LQSIR-HPFLVNLYGSF------QDDSNLYLVMEYVPGG 86

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 15/111 (13%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           F++++ IG G + EVY A  +  G  VA+K ++    ++ + +     +K++ +      
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIF--DLMDAKARADCIKEIDL------ 55

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           LK L+ HPN+  +Y  ++      E+++L  V+EL   G ++ +++  KK+
Sbjct: 56  LKQLN-HPNVIKYYASFI------EDNELNIVLELADAGDLSRMIKHFKKQ 99

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 16/38 (42%), Positives = 28/38 (73%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPE 58
           +FK+  L+GEGT+G+V  A D +  ++ A+KI+ N+P+
Sbjct: 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK 167

Length = 467

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 14/83 (16%)

Query: 26  ELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL 82
            +IG+G +G VY    +++     H A+K +  I  ++EE+E+    LK      E +++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQ---FLK------EGIIM 50

Query: 83  KDLSVHPNIPSFYGLYLRRGGQP 105
           KD S HPN+ S  G+ L   G P
Sbjct: 51  KDFS-HPNVLSLLGICLPSEGSP 72

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 28 IGEGTYGEVYWAKDVETGDHVAIK 51
          I EGTYG VY A+D +TG+ VA+K
Sbjct: 13 IEEGTYGVVYRARDKKTGEIVALK 36

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 21/115 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH-----VAIKIMENIPENIEEIEEEYLVLKD 72
           PR++  L + +GEG +G+V  A+ V   +      VA+K+++   ++  E +     L D
Sbjct: 10  PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLK---DDATEKD-----LSD 61

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
           L  E E  ++K +  H NI +  G+  + G       L+ V+E    G++ D ++
Sbjct: 62  LVSEME--MMKMIGKHKNIINLLGVCTQEG------PLYVVVEYAAHGNLRDFLR 108

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 22/109 (20%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLSIEEEYLVLK 83
           E IG+G +G+VY    ++    VA+K       P+   +  +E  +LK            
Sbjct: 1   EKIGKGNFGDVYKGV-LKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD--------- 50

Query: 84  DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
               HPNI    G+ +++  QP    ++ VMEL  GGS+   ++  K R
Sbjct: 51  ----HPNIVKLIGVCVQK--QP----IYIVMELVPGGSLLTFLRKKKNR 89

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 18/121 (14%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           FK+ + +G+G+YG VY  K +      A+K ++    + +E E+        ++ E  ++
Sbjct: 2   FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKERED--------AVNEIRIL 53

Query: 82  LKDLSV-HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
               SV HPNI S+   +L      + ++L  VME    G ++  +   KK+   + E +
Sbjct: 54  ---ASVNHPNIISYKEAFL------DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQE 104

Query: 141 I 141
           I
Sbjct: 105 I 105

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 23  KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYL--VLKDLSIEEEYL 80
            L EL G+G YG VY      TG  +A+K      E   E++E     ++ +L I  +  
Sbjct: 5   VLDEL-GKGNYGSVYKVLHRPTGVTMAMK------EIRLELDESKFNQIIMELDILHK-- 55

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
                +V P I  FYG +   G       ++  ME    GS+  L  G       + ED 
Sbjct: 56  -----AVSPYIVDFYGAFFIEGA------VYMCMEYMDAGSLDKLYAGGVATEG-IPEDV 103

Query: 141 IAYILYGTVQ 150
           +  I Y  V+
Sbjct: 104 LRRITYAVVK 113

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 38.0 bits (88), Expect = 8e-04
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 21/122 (17%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++ +  ++GEG++G     + V +    A+K +  +P++   +E+           +E +
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIR-LPKSSSAVEDS---------RKEAV 50

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK-KRGVSLSED 139
           +L  +  HPNI +F      +     +  L+ VME C GG   DL+Q +K +RG    ED
Sbjct: 51  LLAKMK-HPNIVAF------KESFEADGHLYIVMEYCDGG---DLMQKIKLQRGKLFPED 100

Query: 140 QI 141
            I
Sbjct: 101 TI 102

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)

Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMEN 55
          +++   +GEGT+GEVY A+ ++TG  VA+K  +M N
Sbjct: 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHN 45

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 21/118 (17%)

Query: 27  LIGEGTYGEVYWAKDVETGDHVAIK-IMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           ++G+GTYG VY A+D+ T   +AIK I E     ++ + EE  +   L            
Sbjct: 15  VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK----------- 63

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY 143
             H NI  + G         E       ME   GGS++ L++  K   +  +E  I +
Sbjct: 64  --HRNIVQYLGSDS------ENGFFKIFMEQVPGGSLSALLRS-KWGPLKDNEQTIIF 112

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           ++++    +G G YG+V  A D +TG  VAIK +    ++    +  Y          E 
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTY---------REL 65

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK +  H N+     ++       +   ++ V  L       DL   +K +   LS+D
Sbjct: 66  RLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHLMG----ADLNNIVKCQ--KLSDD 118

Query: 140 QIAYILY 146
            I +++Y
Sbjct: 119 HIQFLVY 125

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           + +G G +   Y A+DV+TG  +A+K +  +     E EE        ++ +E  ++  L
Sbjct: 6   QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVV-----EALRKEIRLMARL 60

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
           + HP+I          G   E+      +E   GGSV+ L   + K G       I Y  
Sbjct: 61  N-HPHIIRML------GATCEDSHFNLFVEWMAGGSVSHL---LSKYGAFKEAVIINYTE 110

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 18/126 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F ++ L+G G +GEV   ++  TGD  A+K+M+      +E    +        EEE 
Sbjct: 1   KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFF--------EEER 52

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +L  +S  P IP      L+   Q ++D L+ VME   GG   DL+  + +      ED
Sbjct: 53  DILS-ISNSPWIPQ-----LQYAFQ-DKDNLYLVMEYQPGG---DLLSLLNRYEDQFDED 102

Query: 140 QIAYIL 145
              + L
Sbjct: 103 MAQFYL 108

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 11/73 (15%)

Query: 21 KFKLQELIGEGTYGEVY--WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
          K++++  IG GTYG VY    K+ + G   AIK  +   E    I          S   E
Sbjct: 1  KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGIS--------QSACRE 52

Query: 79 YLVLKDLSVHPNI 91
            +L++L  H N+
Sbjct: 53 IALLRELK-HENV 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKD--LSIEEEYLVLKDL 85
           I +G +G VY AK   TGD+ AIK+          +++  ++ K+   +++ E  ++   
Sbjct: 4   ISKGAFGSVYLAKKRSTGDYFAIKV----------LKKSDMIAKNQVTNVKAERAIMMIQ 53

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
              P +   Y  +        +D L+ VME   GG    L++ +
Sbjct: 54  GESPYVAKLYYSF------QSKDYLYLVMEYLNGGDCASLIKTL 91

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 16/90 (17%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           E IGEGTYG VY  ++ +TG  VA+K +        E EEE   +   +I E  L LK+L
Sbjct: 6   EKIGEGTYGVVYKGRNKKTGQIVAMKKIR------LESEEEG--VPSTAIREISL-LKEL 56

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVME 115
             HPNI     + +      +E +L+ + E
Sbjct: 57  Q-HPNIVCLQDVLM------QESRLYLIFE 79

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 25/126 (19%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIM---ENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
           I +G YG V+ AK   TGD  AIK++   + I +N          +  +  E + L    
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKN---------QVDQVLTERDILS--- 48

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI 144
            +  P +   Y  Y  +G    +  L+ VME   GG   DL   ++  G SL ED     
Sbjct: 49  QAQSPYVVKLY--YSFQG----KKNLYLVMEYLPGG---DLASLLENVG-SLDEDVARIY 98

Query: 145 LYGTVQ 150
           +   V 
Sbjct: 99  IAEIVL 104

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 26/124 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R   +L   +G G +GEV+   W         VA+K ++    + ++   E  ++K L 
Sbjct: 4   DRTSIQLLRKLGAGQFGEVWEGLWNNTTP----VAVKTLKPGTMDPKDFLAEAQIMKKLR 59

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HP +   Y +         E+ ++ V EL   GS+ + +QG   R +
Sbjct: 60  -------------HPKLIQLYAVCTL------EEPIYIVTELMKYGSLLEYLQGGAGRAL 100

Query: 135 SLSE 138
            L +
Sbjct: 101 KLPQ 104

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 25/108 (23%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           PR +F L+  +G G +GEV+   W   V     VAIKI+++         ++ L  +D  
Sbjct: 4   PREEFTLERKLGSGYFGEVWEGLWKNRVR----VAIKILKS---------DDLLKQQDFQ 50

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
            E +   LK L  H ++ S + +     G+P    ++ + EL   GS+
Sbjct: 51  KEVQ--ALKRLR-HKHLISLFAVC--SVGEP----VYIITELMEKGSL 89

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 19/115 (16%)

Query: 28  IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV 87
           +G+G+YGEV   +    G    IK + N+  N    E +       + E+E  +L  L  
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKL-NL-RNASRRERK-------AAEQEAQLLSQLK- 57

Query: 88  HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK-KRGVSLSEDQI 141
           HPNI ++     R   + E+  L+ VM  C GG   DL   +K ++G  L E+Q+
Sbjct: 58  HPNIVAY-----RESWEGEDGLLYIVMGFCEGG---DLYHKLKEQKGKLLPENQV 104

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 8   RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEY 67
           + I+ D  R P   +KL  +IG G++G VY A  ++T + VAIK    + ++ +    E 
Sbjct: 54  KMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIK---KVLQDPQYKNREL 110

Query: 68  LVLKDLS 74
           L++K+L+
Sbjct: 111 LIMKNLN 117

Length = 440

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 20/128 (15%)

Query: 23  KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL 82
            ++EL G G YG V   + V TG  +A+K    I   +   E++ L L DL I       
Sbjct: 5   VIEEL-GRGAYGVVDKMRHVPTGTIMAVK---RIRATVNSQEQKRL-LMDLDISMR---- 55

Query: 83  KDLSVH-PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
              SV  P   +FYG   R G       +W  ME+    S+    + +  +G+++ ED +
Sbjct: 56  ---SVDCPYTVTFYGALFREG------DVWICMEV-MDTSLDKFYKKVYDKGLTIPEDIL 105

Query: 142 AYILYGTV 149
             I    V
Sbjct: 106 GKIAVSIV 113

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYL 68
          NKF++  ++GEG YG V   +  ET + VAIK  ++  EN EE++E  L
Sbjct: 1  NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTL 48

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 23/117 (19%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKI-MENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
           EL+G+G +GEV+    ++    VA+K   E++P+ ++        +K LS   E  +LK 
Sbjct: 1   ELLGKGNFGEVF-KGTLKDKTPVAVKTCKEDLPQELK--------IKFLS---EARILKQ 48

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
              HPNI    G+  +R  QP    ++ VMEL  GG   D +  ++K+   L   Q+
Sbjct: 49  YD-HPNIVKLIGVCTQR--QP----IYIVMELVPGG---DFLSFLRKKKDELKTKQL 95

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG0595|consensus	429		99.93
KOG0591|consensus	375		99.88
KOG0615|consensus	475		99.88
KOG0598|consensus	357		99.87
KOG0605|consensus	550		99.87
KOG0611|consensus	668		99.85
KOG0575|consensus	592		99.85
KOG0616|consensus	355		99.84
KOG0583|consensus	370		99.83
KOG0610|consensus	459		99.82
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.8
KOG0694|consensus	694		99.8
KOG0600|consensus	560		99.8
KOG1989|consensus	738		99.8
KOG0592|consensus	604		99.79
KOG0597|consensus	808		99.79
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.79
KOG0661|consensus	538		99.79
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.79
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.78
KOG0589|consensus	426		99.78
KOG0032|consensus	382		99.78
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.78
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.78
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.78
KOG0197|consensus	468		99.77
KOG0588|consensus	786		99.77
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.77
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
KOG0586|consensus	596		99.76
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.76
KOG0194|consensus	474		99.76
KOG0593|consensus	396		99.76
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.76
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.75
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.75
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.75
KOG0580|consensus	281		99.75
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.75
KOG0582|consensus	516		99.75
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.74
KOG4717|consensus	864		99.74
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.74
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.74
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.74
KOG0581|consensus	364		99.74
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.74
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.74
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.73
KOG0659|consensus	318		99.73
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.73
KOG0612|consensus	1317		99.73
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.73
KOG0192|consensus	362		99.73
KOG1187|consensus	361		99.73
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.73
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.73
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.72
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.72
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.72
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.72
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.72
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.72
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.72
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.72
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.71
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.71
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.71
PTZ00267	478	NIMA-related protein kinase; Provisional	99.71
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.71
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.71
PTZ00283	496	serine/threonine protein kinase; Provisional	99.71
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.71
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.71
KOG1026|consensus	774		99.71
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.7
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.7
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.7
KOG0663|consensus	419		99.7
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.7
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.7
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.7
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.7
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.7
KOG0587|consensus	953		99.7
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.7
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.69
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.69
KOG0198|consensus	313		99.69
KOG4236|consensus	888		99.69
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.69
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.69
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.69
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.69
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.69
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.69
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.69
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.69
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.69
KOG1095|consensus	1025		99.69
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.69
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.69
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.69
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.68
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.68
KOG2345|consensus	302		99.68
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.68
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.68
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.68
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.68
KOG1094|consensus	807		99.68
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.68
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.68
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.68
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.68
KOG0690|consensus	516		99.68
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.68
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.68
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.68
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.68
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.68
KOG0667|consensus	586		99.68
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.68
KOG0986|consensus	591		99.67
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.67
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.67
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.67
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.67
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.67
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.67
KOG4250|consensus	732		99.67
KOG0585|consensus	576		99.67
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.67
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.67
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.66
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.66
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.66
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.66
PTZ00036	440	glycogen synthase kinase; Provisional	99.66
KOG0608|consensus	1034		99.66
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.66
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.66
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.66
KOG0033|consensus	355		99.66
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.66
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.66
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.66
PHA03212	391	serine/threonine kinase US3; Provisional	99.66
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.66
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.66
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.66
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.66
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.66
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.66
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.65
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.65
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.65
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.65
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.65
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.65
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.65
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.65
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.65
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.65
KOG0578|consensus	550		99.65
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.65
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.65
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.65
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.65
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.64
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.64
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.64
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.64
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.64
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.64
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.64
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.64
KOG4278|consensus	1157		99.64
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.64
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.64
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.64
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.64
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.64
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.64
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.64
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.64
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.64
KOG1151|consensus	775		99.64
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.64
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.63
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.63
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.63
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.63
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.63
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.63
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.63
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.63
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.62
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.62
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.62
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.62
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.62
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.62
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.62
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.62
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.62
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.62
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.62
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.62
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.62
KOG0660|consensus	359		99.62
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.62
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.62
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.61
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.61
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.61
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.61
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.61
KOG0574|consensus	502		99.61
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.61
KOG0196|consensus	996		99.61
KOG0696|consensus	683		99.61
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.61
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.61
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.61
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.61
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.61
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.61
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.61
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.6
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.6
KOG0594|consensus	323		99.6
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.6
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.6
PHA03209	357	serine/threonine kinase US3; Provisional	99.6
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.6
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.6
KOG0662|consensus	292		99.6
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.6
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.6
PLN00009	294	cyclin-dependent kinase A; Provisional	99.6
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.6
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.6
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.6
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.6
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.6
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.6
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.59
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.59
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.59
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.59
KOG1152|consensus	772		99.59
KOG0695|consensus	593		99.59
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.59
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.59
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.59
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.58
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.58
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.58
KOG0658|consensus	364		99.58
KOG0193|consensus	678		99.58
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.58
PHA02988	283	hypothetical protein; Provisional	99.58
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.58
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.58
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.58
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.58
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.58
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.58
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.58
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.58
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.58
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.57
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.57
KOG0201|consensus	467		99.57
KOG0607|consensus	463		99.57
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.57
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.57
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.57
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.57
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.57
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.57
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.57
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.57
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.57
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.56
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.56
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.56
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.56
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.56
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.56
PHA03211	461	serine/threonine kinase US3; Provisional	99.56
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.56
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.56
PTZ00284	467	protein kinase; Provisional	99.56
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.56
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.56
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.55
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.55
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.55
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.55
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.55
KOG4257|consensus	974		99.55
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.55
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.55
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.55
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.55
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.55
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.55
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.55
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.54
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.54
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.54
PHA03207	392	serine/threonine kinase US3; Provisional	99.54
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.54
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.53
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.53
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.53
KOG0604|consensus	400		99.53
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.53
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.53
KOG0577|consensus	948		99.52
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.52
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.52
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.51
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.51
KOG0599|consensus	411		99.51
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.51
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.51
KOG0199|consensus	1039		99.51
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.51
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.5
KOG1290|consensus	590		99.5
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.5
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.5
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.5
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.5
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.5
KOG0579|consensus	1187		99.49
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.49
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.49
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.49
KOG0666|consensus	438		99.49
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.49
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.49
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.48
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.48
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.48
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.47
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.47
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.47
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.47
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.47
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.46
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.46
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.46
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.45
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.45
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.44
KOG2052|consensus	513		99.43
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.43
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.42
KOG0584|consensus	632		99.41
KOG4279|consensus	1226		99.39
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.38
KOG1025|consensus	1177		99.38
KOG0576|consensus	829		99.36
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.36
KOG4721|consensus	904		99.35
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.35
KOG4645|consensus	1509		99.34
KOG0596|consensus	677		99.31
KOG1163|consensus	341		99.31
KOG1345|consensus	378		99.31
PRK09188	365	serine/threonine protein kinase; Provisional	99.3
PHA03210	501	serine/threonine kinase US3; Provisional	99.3
KOG0200|consensus	609		99.3
KOG0671|consensus	415		99.29
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.26
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.25
KOG0668|consensus	338		99.24
KOG1165|consensus	449		99.23
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.22
PHA02882	294	putative serine/threonine kinase; Provisional	99.22
KOG3653|consensus	534		99.21
KOG0614|consensus	732		99.21
KOG1006|consensus	361		99.2
KOG1164|consensus	322		99.2
PRK10345	210	hypothetical protein; Provisional	99.2
KOG1035|consensus	1351		99.15
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.14
KOG0984|consensus	282		99.1
KOG0669|consensus	376		99.09
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.03
PRK14879	211	serine/threonine protein kinase; Provisional	99.03
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.03
KOG0983|consensus	391		99.02
KOG0670|consensus	752		99.02
KOG1167|consensus	418		99.01
smart00090	237	RIO RIO-like kinase.	98.98
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.87
KOG0603|consensus	612		98.85
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.83
KOG0664|consensus	449		98.69
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.65
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.62
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.52
KOG1166|consensus	974		98.49
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.48
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.38
KOG1027|consensus	903		98.37
PRK12274	218	serine/threonine protein kinase; Provisional	98.32
KOG0665|consensus	369		98.18
KOG1024|consensus	563		98.11
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.02
KOG0195|consensus	448		97.96
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.92
KOG0603|consensus	612		97.74
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.72
KOG0601|consensus	524		97.49
KOG3741|consensus	655		97.4
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.38
KOG1243|consensus	690		97.26
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.16
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.04
KOG0601|consensus	524		97.01
KOG1266|consensus	458		96.98
KOG0590|consensus	601		96.79
KOG0590|consensus	601		96.75
PLN02876	822	acyl-CoA dehydrogenase	96.54
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.46
KOG1240|consensus	1431		96.21
PRK10593	297	hypothetical protein; Provisional	95.75
KOG1235|consensus	538		95.7
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	95.27
PF01636	239	APH: Phosphotransferase enzyme family This family	95.0
COG0478	304	RIO-like serine/threonine protein kinase fused to	94.96
KOG1023|consensus	484		94.81
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.79
KOG3087|consensus	229		94.21
KOG2270|consensus	520		94.02
PRK09550	401	mtnK methylthioribose kinase; Reviewed	93.96
KOG1033|consensus	516		93.52
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.45
PLN00181	793	protein SPA1-RELATED; Provisional	93.29
KOG4158|consensus	598		93.14
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	92.07
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	92.04
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.79
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	91.06
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	90.84
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	90.61
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	88.69
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	87.03
KOG0576|consensus	829		82.79
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	82.34
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	82.31
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	82.14
KOG1035|consensus	1351		81.39

>KOG0595|consensus

Probab=99.93  E-value=3.2e-25  Score=154.60  Aligned_cols=115  Identities=27%  Similarity=0.475  Sum_probs=99.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|.+.+.||.|+|+.||+|.++.++..+|||+|.+.....+....         +..|+.+++.++ |||||++++
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~---------L~~Ei~iLkel~-H~nIV~l~d   76 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVEL---------LLSEIKILKELK-HPNIVRLLD   76 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHH---------HHHHHHHHHhcC-CcceeeEEE
Confidence            3456899999999999999999999999999999999865432222211         558999999999 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.      ++++++|+|||||.||||.++++..+    .+++..++.++.|++.|
T Consensus        77 ~~------~~~~~i~lVMEyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~a  121 (429)
T KOG0595|consen   77 CI------EDDDFIYLVMEYCNGGDLSDYIRRRG----RLPEATARHFMQQLASA  121 (429)
T ss_pred             EE------ecCCeEEEEEEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHH
Confidence            99      78999999999999999999996432    59999999999999877

>KOG0591|consensus

Probab=99.88  E-value=2.8e-24  Score=144.28  Aligned_cols=123  Identities=24%  Similarity=0.444  Sum_probs=104.9

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...+..+|++.+.||.|+||.||++++..++..+|.|.++-.....+..+.         ...|+.++++++ ||||+++
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~---------~v~Ei~lLkQL~-HpNIVqY   83 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQD---------CVKEISLLKQLN-HPNIVQY   83 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHH---------HHHHHHHHHhcC-CchHHHH
Confidence            345667899999999999999999999999999999998854444443333         457999999999 9999999


Q ss_pred             ee-eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          95 YG-LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        95 ~~-~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++ .|.     +...-++++||+|++|||..+++..++.+..++|..+|.++.|+|.|.
T Consensus        84 y~~~f~-----~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL  137 (375)
T KOG0591|consen   84 YAHSFI-----EDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRAL  137 (375)
T ss_pred             HHHhhh-----ccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHH
Confidence            98 552     444459999999999999999999998888999999999999999884

>KOG0615|consensus

Probab=99.88  E-value=5.7e-22  Score=138.79  Aligned_cols=118  Identities=27%  Similarity=0.399  Sum_probs=98.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh--HHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE--IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~--~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.|.+.+.||+|+||.|.++..+.+++.||+|++.+.......  .....      ...+|+.+|++++ ||+||+++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~------~v~~EieILkkL~-HP~IV~~~  242 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTR------DVQNEIEILKKLS-HPNIVRIK  242 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchh------hhHHHHHHHHhcC-CCCEEEEe
Confidence            566789999999999999999999999999999999854332211  11111      1458999999999 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++|      +.+++.||||||++||+|++.+-.    +..+.++.-+.++.|++.|.
T Consensus       243 d~f------~~~ds~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~av  289 (475)
T KOG0615|consen  243 DFF------EVPDSSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAV  289 (475)
T ss_pred             eee------ecCCceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHH
Confidence            999      888999999999999999999943    33689999999999999873

>KOG0598|consensus

Probab=99.87  E-value=7.9e-22  Score=136.17  Aligned_cols=118  Identities=23%  Similarity=0.386  Sum_probs=100.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||+|+.++.+.+++.||+|++++.......   +...     ...|..++..++ ||+||+++
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~---e~~~-----~~~Er~IL~~v~-hPFiv~l~   91 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKK---EVRH-----TKAERNILSKIK-HPFIVKLI   91 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhh---hHHH-----HHHHHHHHHhCC-CCcEeeeE
Confidence            35578999999999999999999999999999999999865433221   1111     557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ..|      ++.+.+|+|+||+.||+|+..|++   . ..|++..++.|+++|+.|+
T Consensus        92 ysF------Qt~~kLylVld~~~GGeLf~hL~~---e-g~F~E~~arfYlaEi~lAL  138 (357)
T KOG0598|consen   92 YSF------QTEEKLYLVLDYLNGGELFYHLQR---E-GRFSEDRARFYLAEIVLAL  138 (357)
T ss_pred             Eec------ccCCeEEEEEeccCCccHHHHHHh---c-CCcchhHHHHHHHHHHHHH
Confidence            999      899999999999999999999963   2 2599999999999999873

>KOG0605|consensus

Probab=99.87  E-value=6.1e-22  Score=142.28  Aligned_cols=117  Identities=26%  Similarity=0.479  Sum_probs=99.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||.||+|+.+.+|..+|+|+++++..........        +..|..+|.... +|+||+++
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~h--------V~aERdiL~~~d-s~~vVKLy  207 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEH--------VRAERDILAEVD-SPWVVKLY  207 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHH--------HHHHHHHhhhcC-CCcEEEEE
Confidence            456679999999999999999999999999999999998765443322222        557999999977 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..|      ++..++||||||++|||+..+|..   .+ .|+++.+++|+++.+.|
T Consensus       208 YsF------QD~~~LYLiMEylPGGD~mTLL~~---~~-~L~e~~arfYiaE~vlA  253 (550)
T KOG0605|consen  208 YSF------QDKEYLYLIMEYLPGGDMMTLLMR---KD-TLTEDWARFYIAETVLA  253 (550)
T ss_pred             EEe------cCCCeeEEEEEecCCccHHHHHHh---cC-cCchHHHHHHHHHHHHH
Confidence            999      899999999999999999999943   22 69999999999998766

>KOG0611|consensus

Probab=99.85  E-value=3e-22  Score=140.79  Aligned_cols=116  Identities=28%  Similarity=0.474  Sum_probs=101.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      +...+|++.+.||+|.||+|.++.....|+.||+|.|+++....+.....        +.+|+.+|..++ ||||++++.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvh--------IRREIeIMSsLN-HPhII~IyE  120 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVH--------IRREIEIMSSLN-HPHIIQIYE  120 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHH--------HHHHHHHHhhcC-CCceeehhh
Confidence            34567999999999999999999998999999999998776555444332        458999999999 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|      +..+.+.+||||..+|+|.||+...    ..|++..+++||+||.+|
T Consensus       121 VF------ENkdKIvivMEYaS~GeLYDYiSer----~~LsErEaRhfFRQIvSA  165 (668)
T KOG0611|consen  121 VF------ENKDKIVIVMEYASGGELYDYISER----GSLSEREARHFFRQIVSA  165 (668)
T ss_pred             hh------cCCceEEEEEEecCCccHHHHHHHh----ccccHHHHHHHHHHHHHH
Confidence            99      8899999999999999999999532    259999999999999987

>KOG0575|consensus

Probab=99.85  E-value=1.7e-20  Score=136.61  Aligned_cols=113  Identities=28%  Similarity=0.579  Sum_probs=96.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ..|...+.||+|+|+.+|.+.+..+|..||+|++.+...........        +.+|+.+.+.+. |||||+++.+| 
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reK--------v~~EIeIHr~L~-HpnIV~f~~~F-   87 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREK--------VLNEIEIHRSLK-HPNIVQFYHFF-   87 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHH--------HHHHHHHHHhcC-CCcEEeeeeEe-
Confidence            56999999999999999999999999999999998643222111111        457999999999 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ++.+++||++|+|+.|+|..++++    +..++|+++++|+.||+.+
T Consensus        88 -----EDs~nVYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~G  130 (592)
T KOG0575|consen   88 -----EDSNNVYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEG  130 (592)
T ss_pred             -----ecCCceEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHH
Confidence                 999999999999999999999852    2369999999999999864

>KOG0616|consensus

Probab=99.84  E-value=8.4e-21  Score=128.23  Aligned_cols=117  Identities=22%  Similarity=0.388  Sum_probs=98.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|+.++.||.|+||.|.+++.+.++..+|+|++.+...-.   .+...     +..+|..+++.+. ||+++++++
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVk---lKQve-----H~~nEk~vL~~v~-~PFlv~l~~  111 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVK---LKQVE-----HTHNEKRVLKAVS-HPFLVKLYG  111 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHH---HHHHH-----HHhhHHHHHhhcc-CceeEEEEE
Confidence            44568999999999999999999999999999999987532111   11111     2568999999999 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      .+      .+.+.+||||||.+||.|+++++..+    .|+++.+++|++||+.|.
T Consensus       112 t~------~d~~~lymvmeyv~GGElFS~Lrk~~----rF~e~~arFYAAeivlAl  157 (355)
T KOG0616|consen  112 TF------KDNSNLYMVMEYVPGGELFSYLRKSG----RFSEPHARFYAAEIVLAL  157 (355)
T ss_pred             ee------ccCCeEEEEEeccCCccHHHHHHhcC----CCCchhHHHHHHHHHHHH
Confidence            99      88999999999999999999996432    599999999999999873

>KOG0583|consensus

Probab=99.83  E-value=1.1e-19  Score=129.97  Aligned_cols=120  Identities=28%  Similarity=0.457  Sum_probs=98.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .....|.+.+.||+|+||+|+.+.+..++..+|+|++.+....... .....     .+.+|+.+++.+..||||+++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~~~~~-----~i~rEi~~~~~~~~HpnI~~l~e   87 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-QKLDE-----LIKREISILRRLRSHPNIIRLLE   87 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc-cccch-----hhHHHHHHHHHhccCCCEeEEEE
Confidence            4567899999999999999999999999999999977654221111 01111     14479999999988999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++      .+...+|+|||||.||+|++++..    ...+.|..++.+|.|+++|.
T Consensus        88 v~------~t~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav  133 (370)
T KOG0583|consen   88 VF------ATPTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAV  133 (370)
T ss_pred             EE------ecCCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHH
Confidence            99      788889999999999999999953    23699999999999999873

>KOG0610|consensus

Probab=99.82  E-value=1.2e-20  Score=132.22  Aligned_cols=117  Identities=25%  Similarity=0.376  Sum_probs=98.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||.|.-|.||++..+.++..+|+|++.+......+-.   .     .+..|..||+.++ ||.++.||..|
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl---~-----Ra~tE~eIL~~lD-HPFlPTLYa~f  146 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKL---K-----RAQTEREILSLLD-HPFLPTLYASF  146 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHH---H-----HHHHHHHHHHhcC-CCccchhhhee
Confidence            4568889999999999999999999999999999986433221111   1     1558999999999 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                            +++.+.|++||||+||+|+.++++  +.+..|++..+++|+++++-|+
T Consensus       147 ------et~~~~cl~meyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~AL  192 (459)
T KOG0610|consen  147 ------ETDKYSCLVMEYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLAL  192 (459)
T ss_pred             ------eccceeEEEEecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHH
Confidence                  999999999999999999999974  4455799999999999998763

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=9.9e-19  Score=125.23  Aligned_cols=113  Identities=22%  Similarity=0.427  Sum_probs=93.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|++............        .+.+|+.++..++ ||||+++++.+ 
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~E~~il~~l~-h~~iv~~~~~~-   70 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVA--------HVRAERDILAEAD-NPWVVKLYYSF-   70 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhCC-CCCCcceEEEE-
Confidence            4799999999999999999999999999999999753211111111        1457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+++|++|||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~E~~~~g~L~~~l~~---~-~~l~~~~~~~~~~qi~~a  113 (364)
T cd05599          71 -----QDENYLYLIMEYLPGGDMMTLLMK---K-DTFTEEETRFYIAETILA  113 (364)
T ss_pred             -----EcCCeEEEEECCCCCcHHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                 788899999999999999999842   2 259999999999999876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0694|consensus

Probab=99.80  E-value=3.1e-19  Score=131.65  Aligned_cols=118  Identities=22%  Similarity=0.334  Sum_probs=96.4

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|.++++||+|+||+|+++..+.+++.+|||.+++...-..+...        +...|..++..+.+||+++++
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve--------~~~~EkrI~~la~~HPFL~~L  434 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVE--------SLMCEKRIFELANRHPFLVNL  434 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHH--------HHHHHHHHHHHhccCCeEeec
Confidence            345667999999999999999999999999999999999876433222111        145788888888789999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+|      ++.+++|+||||+.|||+..+.    +. ..|++..+++|++.|+.|
T Consensus       435 ~~~f------QT~~~l~fvmey~~Ggdm~~~~----~~-~~F~e~rarfyaAev~l~  480 (694)
T KOG0694|consen  435 FSCF------QTKEHLFFVMEYVAGGDLMHHI----HT-DVFSEPRARFYAAEVVLG  480 (694)
T ss_pred             cccc------ccCCeEEEEEEecCCCcEEEEE----ec-ccccHHHHHHHHHHHHHH
Confidence            9999      9999999999999999944433    21 259999999999999876

>KOG0600|consensus

Probab=99.80  E-value=1.2e-19  Score=129.97  Aligned_cols=116  Identities=30%  Similarity=0.411  Sum_probs=94.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..+.|+.++.||+|.||.||++++..+|..||+|.++......+....         ..+|+.+|++++ ||||++|.++
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t---------~~REI~ILr~l~-HpNIikL~ei  184 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPIT---------AIREIKILRRLD-HPNIIKLEEI  184 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHH---------HHHHHHHHHhcC-CCcccceeeE
Confidence            345688899999999999999999999999999999866544333222         347999999999 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...    ...+.+|||+|||+ .||.-++   ...+..|++++++.||.|+++.
T Consensus       185 vt~----~~~~siYlVFeYMd-hDL~GLl---~~p~vkft~~qIKc~mkQLl~G  230 (560)
T KOG0600|consen  185 VTS----KLSGSIYLVFEYMD-HDLSGLL---SSPGVKFTEPQIKCYMKQLLEG  230 (560)
T ss_pred             EEe----cCCceEEEEEeccc-chhhhhh---cCCCcccChHHHHHHHHHHHHH
Confidence            853    23578999999995 5777777   3444569999999999999864

>KOG1989|consensus

Probab=99.80  E-value=1.2e-18  Score=131.09  Aligned_cols=124  Identities=27%  Similarity=0.432  Sum_probs=98.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .+-..++++.+.|.+|||+.||++++...+..+|+|.+-..   .+...+.        ..+|+.+|+.|.+|+|||.++
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~--------v~~EI~~MK~L~gh~nIV~yi  101 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNA--------VKREIDIMKLLSGHKNIVSYI  101 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHH--------HHHHHHHHHHhcCCCceeeEe
Confidence            44566789999999999999999999888789999987543   2333333        347999999999999999999


Q ss_pred             ee-eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GL-YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~-~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +. .....+....-.+.|+||||+||.|-|++......  .|++++++.||.|+|+|.
T Consensus       102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AV  157 (738)
T KOG1989|consen  102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAV  157 (738)
T ss_pred             ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHH
Confidence            94 33322212245689999999999999999754444  399999999999999883

>KOG0592|consensus

Probab=99.79  E-value=1.2e-19  Score=130.90  Aligned_cols=117  Identities=28%  Similarity=0.459  Sum_probs=98.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+|+.|++++++.+++.||+|++.+...-.+.-...        +..|..+|..+.+||.|++|+..
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkY--------V~~Ek~~l~~L~~hPgivkLy~T  142 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKY--------VTREKEALTQLSGHPGIVKLYFT  142 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccch--------hhHHHHHHHHhhCCCCeEEEEEE
Confidence            4568999999999999999999999999999999987533222221111        34688889999779999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      |      +++..+|+|+||+++|+|.++|+..+    .|++..+++|++||+.|+
T Consensus       143 F------QD~~sLYFvLe~A~nGdll~~i~K~G----sfde~caR~YAAeIldAl  187 (604)
T KOG0592|consen  143 F------QDEESLYFVLEYAPNGDLLDLIKKYG----SFDETCARFYAAEILDAL  187 (604)
T ss_pred             e------ecccceEEEEEecCCCcHHHHHHHhC----cchHHHHHHHHHHHHHHH
Confidence            9      88999999999999999999996543    599999999999999873

>KOG0597|consensus

Probab=99.79  E-value=1.4e-19  Score=131.62  Aligned_cols=111  Identities=30%  Similarity=0.555  Sum_probs=97.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.....++..+         +.+|+.+++.++ ||||+.+++.| 
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~---------l~~ev~i~r~lk-Hpniv~m~esf-   70 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKN---------LRQEVRILRSLK-HPNIVEMLESF-   70 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHH---------HHHHHHHHHhcC-CcchhhHHHhh-
Confidence            5788999999999999999999999999999999877655554443         568999999999 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ++..++|+|+|||.| +|+.++..    +..++|+.++.++.|+.+|
T Consensus        71 -----Et~~~~~vVte~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsa  112 (808)
T KOG0597|consen   71 -----ETSAHLWVVTEYAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSA  112 (808)
T ss_pred             -----cccceEEEEehhhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHH
Confidence                 999999999999965 99999842    3369999999999999877

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=2.2e-18  Score=124.04  Aligned_cols=113  Identities=23%  Similarity=0.378  Sum_probs=93.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..+++.+|+|.+.+..........        .+.+|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~E~~il~~l~-hp~iv~~~~~~-   70 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLA--------HVKAERDVLAESD-SPWVVSLYYSF-   70 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHH--------HHHHHHHHHHhCC-CCCcceEEEEE-
Confidence            4799999999999999999999999999999998643211111111        1457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+++|++|||++||+|.+++..    ...+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~a  113 (377)
T cd05629          71 -----QDAQYLYLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLA  113 (377)
T ss_pred             -----EcCCeeEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence                 778899999999999999999853    2358999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0661|consensus

Probab=99.79  E-value=2.4e-20  Score=132.72  Aligned_cols=116  Identities=32%  Similarity=0.444  Sum_probs=95.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|.+++.||.|+||.||+++...++..||+|.+++....-++..          -++|+..+++++.||||+++.
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~----------nLREvksL~kln~hpniikL~   75 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECM----------NLREVKSLRKLNPHPNIIKLK   75 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHH----------HHHHHHHHHhcCCCCcchhhH
Confidence            3456789999999999999999999999999999999876443322222          358999999999999999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +++.     +.+..+|+|||||+ .+|.++++   .++..|++..++.|+.||++
T Consensus        76 Evi~-----d~~~~L~fVfE~Md-~NLYqLmK---~R~r~fse~~irnim~Qilq  121 (538)
T KOG0661|consen   76 EVIR-----DNDRILYFVFEFMD-CNLYQLMK---DRNRLFSESDIRNIMYQILQ  121 (538)
T ss_pred             HHhh-----ccCceEeeeHHhhh-hhHHHHHh---hcCCcCCHHHHHHHHHHHHH
Confidence            9995     33448999999994 57888885   44557999999999999985

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.79  E-value=3.4e-18  Score=123.28  Aligned_cols=112  Identities=21%  Similarity=0.318  Sum_probs=92.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|++++.||+|+||.||++.+..++..+|+|++............        .+..|+.++..+. ||||+++++.+  
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~--------~~~~E~~il~~l~-h~~iv~l~~~~--   70 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVA--------HVKAERDILAEAD-NEWVVKLYYSF--   70 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHH--------HHHHHHHHHHhcC-CCCeeeeEEEE--
Confidence            689999999999999999999999999999999753221111111        1557999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+++|++|||++||+|.+++...    ..+++..++.++.|++.|
T Consensus        71 ----~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~a  113 (381)
T cd05626          71 ----QDKDNLYFVMDYIPGGDMMSLLIRM----EVFPEVLARFYIAELTLA  113 (381)
T ss_pred             ----ecCCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                6788999999999999999998532    258999999999999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.78  E-value=3.3e-18  Score=122.60  Aligned_cols=113  Identities=23%  Similarity=0.395  Sum_probs=93.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..+++.+|+|++.+..........        .+..|+.++..+. ||+|+++++.+ 
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~E~~il~~~~-~~~iv~~~~~~-   70 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVG--------HIRAERDILVEAD-SLWVVKMFYSF-   70 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHH--------HHHHHHHHHHhCC-CCCcceEEEEE-
Confidence            4799999999999999999999889999999998753211111111        1457889999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           +....+|++|||++||+|.+++..   . ..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~E~~~gg~L~~~l~~---~-~~l~~~~~~~~~~qi~~a  113 (363)
T cd05628          71 -----QDKLNLYLIMEFLPGGDMMTLLMK---K-DTLTEEETQFYIAETVLA  113 (363)
T ss_pred             -----ecCCeEEEEEcCCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence                 778899999999999999999853   2 359999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0589|consensus

Probab=99.78  E-value=5.3e-19  Score=126.31  Aligned_cols=115  Identities=23%  Similarity=0.414  Sum_probs=97.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+++.+|+|+||.++++.++.++..+++|.|............         ..+|+.+++++. ||||+.+.++|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~---------A~~E~~lis~~~-hP~iv~y~ds~   72 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRS---------AIQEMDLLSKLL-HPNIVEYKDSF   72 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHH---------HHHHHHHHHhcc-CCCeeeeccch
Confidence            46899999999999999999999999999999999866544333322         447999999998 99999999999


Q ss_pred             eecCCCCCCce-EEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQ-LWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++. ++|+|+||+||++.+.+...+  +..+++..+..++.|++.|
T Consensus        73 ------~~~~~~l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~a  118 (426)
T KOG0589|consen   73 ------EEDGQLLCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLA  118 (426)
T ss_pred             ------hcCCceEEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHH
Confidence                  45555 999999999999999996543  4579999999999999887

>KOG0032|consensus

Probab=99.78  E-value=2.6e-18  Score=123.07  Aligned_cols=117  Identities=31%  Similarity=0.533  Sum_probs=100.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ......|++.+.||.|.||.||+|..+.+|+.+|+|.+.+...........        +.+|+.+|+.+.+|||+++++
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~--------v~~Ev~il~~l~~hpniv~l~  102 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDRED--------VRREVAILQQLSGHPNIVQLK  102 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHH--------HHHHHHHHHhccCCCCEEEEE
Confidence            345668999999999999999999999999999999998654433221111        558999999998899999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.|      ++...+++|||+|+||+|++.+...     .+++..+..++.|++.|
T Consensus       103 ~~~------e~~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~a  147 (382)
T KOG0032|consen  103 DAF------EDPDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEA  147 (382)
T ss_pred             EEE------EcCCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHH
Confidence            999      8899999999999999999999543     29999999999999886

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.78  E-value=4.2e-18  Score=122.55  Aligned_cols=113  Identities=21%  Similarity=0.344  Sum_probs=92.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..+++.+|+|++..........   .     ..+.+|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~---~-----~~~~~E~~il~~l~-h~~iv~~~~~~-   70 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQ---A-----AHVKAERDILAEAD-NEWVVKLYYSF-   70 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhh---H-----HHHHHHHHHHHhCC-CCCcceEEEEE-
Confidence            47999999999999999999999999999999986421111111   0     11457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||+++|+|.+++..   . ..+++..++.++.||+.|
T Consensus        71 -----~~~~~~~lv~E~~~~g~L~~~i~~---~-~~~~~~~~~~~~~qi~~a  113 (376)
T cd05598          71 -----QDKDNLYFVMDYIPGGDMMSLLIR---L-GIFEEDLARFYIAELTCA  113 (376)
T ss_pred             -----EcCCEEEEEEeCCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence                 778899999999999999999853   2 258999999999999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.78  E-value=1.6e-17  Score=129.46  Aligned_cols=126  Identities=23%  Similarity=0.354  Sum_probs=101.2

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      .......++|.+++.||+|+||.||++.+..++..+|+|.+............         +..|+.++..+. ||||+
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~---------~~~EI~IL~~L~-HPNIV   75 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQ---------LVIEVNVMRELK-HKNIV   75 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHH---------HHHHHHHHHHcC-CCCcC
Confidence            33445567999999999999999999999988999999998754332222111         557999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++++.|..    .....+||||||+++|+|.+++.........+++..++.++.||+.|+
T Consensus        76 rl~d~f~d----e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~AL  131 (1021)
T PTZ00266         76 RYIDRFLN----KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHAL  131 (1021)
T ss_pred             eEEEEEEe----cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            99998853    345679999999999999999975444444699999999999999873

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.78  E-value=5.8e-18  Score=122.09  Aligned_cols=112  Identities=21%  Similarity=0.346  Sum_probs=92.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|.+++.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.+++.+. ||||+++++.+  
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~--------~~~~E~~il~~~~-h~~iv~~~~~~--   70 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVA--------HVKAERDILAEAD-NEWVVRLYYSF--   70 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHH--------HHHHHHHHHHhCC-CCcCCeEEEEE--
Confidence            589999999999999999999999999999998743211111111        1557999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.+|+||||+++|+|.+++..   . ..+++..++.++.||+.|
T Consensus        71 ----~~~~~~~lv~E~~~gg~L~~~l~~---~-~~~~e~~~~~~~~qi~~a  113 (382)
T cd05625          71 ----QDKDNLYFVMDYIPGGDMMSLLIR---M-GIFPEDLARFYIAELTCA  113 (382)
T ss_pred             ----EeCCEEEEEEeCCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence                678899999999999999999853   2 258999999999999876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0197|consensus

Probab=99.77  E-value=7.2e-19  Score=126.33  Aligned_cols=118  Identities=25%  Similarity=0.389  Sum_probs=96.9

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+.+..+++.+++++.||+|.||.||+|.... ...+|+|.+.......+.            +.+|+.+|+++. |++|
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~------------f~~Ea~iMk~L~-H~~l  263 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEA------------FLREAQIMKKLR-HEKL  263 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhH------------HHHHHHHHHhCc-ccCe
Confidence            45566777778889999999999999999743 347899988754333222            457999999999 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |++++++      ..++.+||||||++.|+|.++++.  ..+..+...+.+.++.|||+.
T Consensus       264 V~l~gV~------~~~~piyIVtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeG  315 (468)
T KOG0197|consen  264 VKLYGVC------TKQEPIYIVTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEG  315 (468)
T ss_pred             EEEEEEE------ecCCceEEEEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHH
Confidence            9999999      677789999999999999999975  234469999999999999974

>KOG0588|consensus

Probab=99.77  E-value=1.2e-18  Score=128.41  Aligned_cols=116  Identities=28%  Similarity=0.459  Sum_probs=97.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..-.-|++.+.||.|+-|.|-++.+..+|+..|||+|.+.....+....        .+.+|+.+|+-+. ||||+++++
T Consensus         9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~--------~IerEIviMkLi~-HpnVl~Lyd   79 (786)
T KOG0588|consen    9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPA--------GIEREIVIMKLIE-HPNVLRLYD   79 (786)
T ss_pred             ccccceeccccccCCCCceehhhhcccccceeEEEeecccccccccccc--------chhhhhHHHHHhc-CCCeeeeee
Confidence            3445699999999999999999999999999999999864322221111        1568999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      +...++|++.||++||.|++++..    ++.+++..+.+++.||+.+
T Consensus        80 Vw------e~~~~lylvlEyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~g  124 (786)
T KOG0588|consen   80 VW------ENKQHLYLVLEYVPGGELFDYLVR----KGPLPEREAAHFFRQILDG  124 (786)
T ss_pred             ee------ccCceEEEEEEecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHH
Confidence            99      889999999999999999999943    2369999999999999865

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.1e-17  Score=118.60  Aligned_cols=113  Identities=24%  Similarity=0.377  Sum_probs=93.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|++.........   ...     .+..|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~---~~~-----~~~~e~~~l~~~~-h~~iv~~~~~~-   70 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLN---EVR-----HVLTERDILTTTK-SEWLVKLLYAF-   70 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh---HHH-----HHHHHHHHHHhCC-CCCCccEEEEE-
Confidence            4799999999999999999999889999999998753211111   111     1557999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..|++|||++||+|.+++..    ...+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~  113 (333)
T cd05600          71 -----QDDEYLYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEA  113 (333)
T ss_pred             -----EcCCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence                 778899999999999999999842    2258999999999999876

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=6.1e-18  Score=117.84  Aligned_cols=113  Identities=22%  Similarity=0.299  Sum_probs=92.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+...........   .     .+.+|+.+++.+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~---~-----~~~~E~~~l~~l~-hp~iv~~~~~~-   70 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQE---Q-----HVHNEKRVLKEVS-HPFIIRLFWTE-   70 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHH---H-----HHHHHHHHHHhCC-CCcHhhhHhhh-
Confidence            478999999999999999999988999999999874321111111   1     1557999999998 99999999988 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||+++|+|.++++.   . ..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~qi~~~  113 (291)
T cd05612          71 -----HDQRFLYMLMEYVPGGELFSYLRN---S-GRFSNSTGLFYASEIVCA  113 (291)
T ss_pred             -----ccCCeEEEEEeCCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                 678899999999999999999853   2 258999999999999876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=1.1e-17  Score=118.47  Aligned_cols=115  Identities=23%  Similarity=0.380  Sum_probs=94.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..+++.+|+|++...........   .     .+.+|+.++..+. ||||+++++.
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~-----~~~~E~~~l~~l~-hp~iv~~~~~   86 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQV---Q-----HVAQEKSILMELS-HPFIVNMMCS   86 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhH---H-----HHHHHHHHHHhCC-CCCCCcEEEE
Confidence            45789999999999999999999988999999999874221111111   1     1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        87 ~------~~~~~~~lv~e~~~~~~L~~~l~~---~-~~~~~~~~~~~~~qi~~a  130 (329)
T PTZ00263         87 F------QDENRVYFLLEFVVGGELFTHLRK---A-GRFPNDVAKFYHAELVLA  130 (329)
T ss_pred             E------EcCCEEEEEEcCCCCChHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            9      678899999999999999998853   2 258999999999999876

>KOG0586|consensus

Probab=99.76  E-value=7.4e-18  Score=123.07  Aligned_cols=114  Identities=26%  Similarity=0.452  Sum_probs=98.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ....|.+.+.||+|.|+.|.++.+..++..||+|.+.++.........         +-+|+.+|+.++ ||||++++.+
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k---------~~rev~imk~l~-HPnIvkl~~v  123 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQK---------LGREVDIMKSLN-HPNIVKLFSV  123 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHH---------HHHHHHHHHhcC-Ccceeeeeee
Confidence            345799999999999999999999999999999999876655444333         447999999999 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .      +++..+|+||||+.+|++++++..+.    .+.+..++.+|.|+.+|
T Consensus       124 ~------~t~~~lylV~eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsa  167 (596)
T KOG0586|consen  124 I------ETEATLYLVMEYASGGELFDYLVKHG----RMKEKEARAKFRQIVSA  167 (596)
T ss_pred             e------eecceeEEEEEeccCchhHHHHHhcc----cchhhhhhhhhHHHHHH
Confidence            9      88999999999999999999996433    37779999999999877

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.8e-17  Score=117.44  Aligned_cols=114  Identities=27%  Similarity=0.388  Sum_probs=92.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+.+.......   +..     .+..|..++..+. |+||+.+++.+ 
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~-----~~~~e~~~l~~~~-~~~i~~~~~~~-   70 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRA---ETA-----CFREERDVLVNGD-RRWITNLHYAF-   70 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh---hHH-----HHHHHHHHHHhCC-CCCCCceEEEE-
Confidence            4799999999999999999999889999999998742111111   111     1457888888887 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           +..+++|+||||++||+|.+++...   ...+++..++.++.||+.|
T Consensus        71 -----~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~  114 (331)
T cd05597          71 -----QDENNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLA  114 (331)
T ss_pred             -----ecCCeEEEEEecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence                 7888999999999999999998532   2358999999999999876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0194|consensus

Probab=99.76  E-value=1.5e-17  Score=120.74  Aligned_cols=126  Identities=32%  Similarity=0.471  Sum_probs=96.8

Q ss_pred             cccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCC---e-EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHH
Q psy2812           7 SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGD---H-VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL   82 (152)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~-~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   82 (152)
                      ...+....|....++..+.+.||+|.||.||+|..+..+.   . ||+|.........+....+        +.+|+.+|
T Consensus       144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e--------~m~EArvM  215 (474)
T KOG0194|consen  144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKE--------FMKEARVM  215 (474)
T ss_pred             cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHH--------HHHHHHHH
Confidence            3444556677777888888999999999999999765432   2 7888776422112222222        67899999


Q ss_pred             hccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          83 KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        83 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +.++ ||||++++++.      .....++++||+|.||+|.++++..+   ..++..+...++.+++.
T Consensus       216 r~l~-H~NVVr~yGVa------~~~~Pl~ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~  273 (474)
T KOG0194|consen  216 RQLN-HPNVVRFYGVA------VLEEPLMLVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAAR  273 (474)
T ss_pred             HhCC-CCCEEEEEEEE------cCCCccEEEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHh
Confidence            9998 99999999998      67888999999999999999996432   25899998888888763

>KOG0593|consensus

Probab=99.76  E-value=2e-18  Score=117.43  Aligned_cols=113  Identities=23%  Similarity=0.408  Sum_probs=92.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      +.|+.+..+|+|+||.||+|+++.+|+.||+|.+.-+..  ....+.+       ..+|+.+++++. |+|+|.++++| 
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed--d~~VkKI-------AlREIrmLKqLk-H~NLVnLiEVF-   70 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED--DPVVKKI-------ALREIRMLKQLK-HENLVNLIEVF-   70 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc--cHHHHHH-------HHHHHHHHHhcc-cchHHHHHHHH-
Confidence            568888999999999999999999999999998864322  2233333       458999999999 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                           .....+++|+|||+. ++.+.+.++.   ..++...++.|+.|+++|.
T Consensus        71 -----rrkrklhLVFE~~dh-TvL~eLe~~p---~G~~~~~vk~~l~Q~l~ai  114 (396)
T KOG0593|consen   71 -----RRKRKLHLVFEYCDH-TVLHELERYP---NGVPSELVKKYLYQLLKAI  114 (396)
T ss_pred             -----HhcceeEEEeeecch-HHHHHHHhcc---CCCCHHHHHHHHHHHHHHh
Confidence                 788999999999964 5555564433   2499999999999999873

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.76  E-value=1.8e-17  Score=118.62  Aligned_cols=113  Identities=24%  Similarity=0.412  Sum_probs=92.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..++..+|+|.+............        .+..|+.++..+. ||+++++++.+ 
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-~~~iv~~~~~~-   70 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVA--------HIRAERDILVEAD-GAWVVKMFYSF-   70 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHH--------HHHHHHHHHHhCC-CCCEeeEEEEE-
Confidence            4789999999999999999999999999999998742211111111        1457889999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||++||+|.+++..   . ..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~E~~~gg~L~~~l~~---~-~~l~~~~~~~~~~qi~~~  113 (360)
T cd05627          71 -----QDKRNLYLIMEFLPGGDMMTLLMK---K-DTLSEEATQFYIAETVLA  113 (360)
T ss_pred             -----EcCCEEEEEEeCCCCccHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence                 788899999999999999999842   2 258999999999999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.75  E-value=2.8e-17  Score=116.54  Aligned_cols=114  Identities=25%  Similarity=0.350  Sum_probs=92.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+.+.......   +..     .+..|..++..+. |++|+++++.+ 
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~-----~~~~e~~~l~~~~-~~~i~~l~~~~-   70 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRA---ETA-----CFREERNVLVNGD-CQWITTLHYAF-   70 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhH---HHH-----HHHHHHHHHHhCC-CCCEeeEEEEE-
Confidence            4799999999999999999999889999999998642111111   111     1456888888888 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           +..+..|++|||++||+|.+++...   +..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~  114 (331)
T cd05624          71 -----QDENYLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLA  114 (331)
T ss_pred             -----EcCCEEEEEEeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence                 7888999999999999999999532   2358999999999999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.75  E-value=3.1e-17  Score=116.08  Aligned_cols=114  Identities=29%  Similarity=0.447  Sum_probs=93.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||++.+..+++.+|+|.+............        .+..|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~i~~~~~-~~~i~~~~~~~-   70 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVS--------FFEEERDILSISN-SPWIPQLQYAF-   70 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhCC-CCCCcceeeEE-
Confidence            4799999999999999999999999999999998753221111111        1457888888888 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||+++|+|.++++..   ...+++..++.++.|+++|
T Consensus        71 -----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~a  114 (330)
T cd05601          71 -----QDKDNLYLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLA  114 (330)
T ss_pred             -----ecCCeEEEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence                 6778899999999999999998542   2359999999999999876

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.75  E-value=2.3e-17  Score=118.60  Aligned_cols=118  Identities=18%  Similarity=0.320  Sum_probs=95.7

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++.+.||+|+||.||++.+..+++.+|+|.+.+..........        .+..|+.+++.++ ||||++
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~i~~~~~-hp~iv~  107 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSA--------FFWEERDIMAFAN-SPWVVQ  107 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHH--------HHHHHHHHHHhCC-CCCEee
Confidence            3445667899999999999999999999999999999998742211111110        1457888999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ..++.+|+||||+++|+|.++++.   .  .+++..++.++.||+.|
T Consensus       108 ~~~~~------~~~~~~~lv~Ey~~gg~L~~~l~~---~--~~~~~~~~~~~~qil~a  154 (370)
T cd05621         108 LFCAF------QDDKYLYMVMEYMPGGDLVNLMSN---Y--DVPEKWAKFYTAEVVLA  154 (370)
T ss_pred             EEEEE------EcCCEEEEEEcCCCCCcHHHHHHh---c--CCCHHHHHHHHHHHHHH
Confidence            99999      788899999999999999998842   2  48999999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0580|consensus

Probab=99.75  E-value=8.3e-19  Score=115.50  Aligned_cols=117  Identities=21%  Similarity=0.396  Sum_probs=97.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|.||.||+++.+.++-.+|+|++-++.......        .-++.+|+.+-..++ ||||.+++++
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v--------~~qlrREiEIqs~L~-hpnilrlY~~   90 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQV--------EHQLRREIEIQSHLR-HPNILRLYGY   90 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcc--------hhhhhheeEeecccC-CccHHhhhhh
Confidence            4568999999999999999999999999999999987543211111        122668999999999 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |      .+...+|+++||..+|+++..++.-  ....+++..+..|+.|++.|
T Consensus        91 f------hd~~riyLilEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~A  136 (281)
T KOG0580|consen   91 F------HDSKRIYLILEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANA  136 (281)
T ss_pred             e------eccceeEEEEEecCCchHHHHHHhc--ccccccccchhHHHHHHHHH
Confidence            9      6888999999999999999999632  22359999999999999987

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.75  E-value=3.5e-17  Score=117.67  Aligned_cols=117  Identities=20%  Similarity=0.305  Sum_probs=94.9

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|++.+.||+|+||.||++.+..++..+|+|.+.+..........        .+..|+.+++.++ ||||+++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~il~~~~-h~~iv~~  108 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSA--------FFWEERDIMAHAN-SEWIVQL  108 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHH--------HHHHHHHHHHhCC-CCCcceE
Confidence            345567899999999999999999999999999999998742211111100        1447889999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+.+|++|||++||+|.+++..   .  .+++..+..++.|++.|
T Consensus       109 ~~~~------~~~~~~~lv~Ey~~gg~L~~~l~~---~--~l~~~~~~~~~~qi~~a  154 (370)
T cd05596         109 HYAF------QDDKYLYMVMEYMPGGDLVNLMSN---Y--DIPEKWARFYTAEVVLA  154 (370)
T ss_pred             EEEE------ecCCEEEEEEcCCCCCcHHHHHHh---c--CCCHHHHHHHHHHHHHH
Confidence            9999      788899999999999999998842   2  48999999999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0582|consensus

Probab=99.75  E-value=3.9e-17  Score=115.85  Aligned_cols=121  Identities=30%  Similarity=0.459  Sum_probs=103.0

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..+....++|++.+.||.|.-+.||+++....+..||||++........     ...     +.+|+..|..++ ||||+
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-----ld~-----l~kE~~~msl~~-HPNIv   87 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-----LDA-----LRKEVQTMSLID-HPNIV   87 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-----HHH-----HHHHHHHhhhcC-CCCcc
Confidence            4556778899999999999999999999999999999999975433222     111     458999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      .++..|      ..+..+|+||.||.+|++.++++..-..+  ++|..+..+++++++|+
T Consensus        88 ~~~~sF------vv~~~LWvVmpfMa~GS~ldIik~~~~~G--l~E~~Ia~iLre~LkaL  139 (516)
T KOG0582|consen   88 TYHCSF------VVDSELWVVMPFMAGGSLLDIIKTYYPDG--LEEASIATILREVLKAL  139 (516)
T ss_pred             eEEEEE------EecceeEEeehhhcCCcHHHHHHHHcccc--ccHHHHHHHHHHHHHHH
Confidence            999999      67889999999999999999997655554  99999999999999873

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=6.1e-17  Score=112.47  Aligned_cols=114  Identities=21%  Similarity=0.271  Sum_probs=92.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.+++.++ |||++++++.+  
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~--------~~~~E~~~l~~l~-h~~iv~~~~~~--   69 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA--------MALNEKQILEKVN-SRFVVSLAYAY--   69 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHH--------HHHHHHHHHHhcC-CCCEeeeeeee--
Confidence            488999999999999999999888999999998753221111110        1457999999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ..++.++++|||+++|+|.+++...  ....+++..+..++.|++.|
T Consensus        70 ----~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~  114 (285)
T cd05605          70 ----ETKDALCLVLTLMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCG  114 (285)
T ss_pred             ----cCCCeEEEEEeccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHH
Confidence                6778999999999999999888532  22358999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG4717|consensus

Probab=99.74  E-value=2.8e-18  Score=124.12  Aligned_cols=116  Identities=24%  Similarity=0.408  Sum_probs=97.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ...-|.+.+.||+|.|..|.++++.-+|.+||+|+|.++....-.-..         +..|+..|+-+. |||||++|++
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~h---------lfqEVRCMKLVQ-HpNiVRLYEV   85 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGH---------LFQEVRCMKLVQ-HPNIVRLYEV   85 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhH---------HHHHHHHHHHhc-CcCeeeeeeh
Confidence            345689999999999999999999899999999999876654321111         557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      .      .+...+|+|+|+-++|+|+|||-.  . ...++|..++.||+||+.|+
T Consensus        86 i------DTQTKlyLiLELGD~GDl~DyImK--H-e~Gl~E~La~kYF~QI~~AI  131 (864)
T KOG4717|consen   86 I------DTQTKLYLILELGDGGDLFDYIMK--H-EEGLNEDLAKKYFAQIVHAI  131 (864)
T ss_pred             h------cccceEEEEEEecCCchHHHHHHh--h-hccccHHHHHHHHHHHHHHH
Confidence            9      788899999999999999999943  2 23599999999999998873

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.74  E-value=5.6e-17  Score=111.56  Aligned_cols=114  Identities=19%  Similarity=0.279  Sum_probs=90.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ..++|++.+.||+|+||.||++...   ..+..+|+|.++.... .....         .+.+|+.++..+. |||++++
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~---------~~~~e~~~l~~l~-h~~iv~~   71 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRR---------GFLAEALTLGQFD-HSNIVRL   71 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHH---------HHHHHHHHHhcCC-CCCcCeE
Confidence            4568999999999999999999764   3456789998874322 11111         1557999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+..+++|||+++|+|.+++..   ....+++..++.++.|++.|
T Consensus        72 ~~~~------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~a  119 (266)
T cd05064          72 EGVI------TRGNTMMIVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASG  119 (266)
T ss_pred             EEEE------ecCCCcEEEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            9998      677889999999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.74  E-value=7.1e-17  Score=112.15  Aligned_cols=114  Identities=20%  Similarity=0.256  Sum_probs=92.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|+..+.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.++..+. |++++.+++.+  
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~--------~~~~E~~il~~l~-~~~iv~~~~~~--   69 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA--------MALNEKRILEKVN-SRFVVSLAYAY--   69 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHH--------HHHHHHHHHHhcC-CCcEEEEEEEE--
Confidence            378899999999999999999899999999998753221111111        1457999999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.++++|||+++|+|.+++....  ...+++..+..++.|++.|
T Consensus        70 ----~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~  114 (285)
T cd05631          70 ----ETKDALCLVLTIMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCG  114 (285)
T ss_pred             ----ccCCeEEEEEEecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHH
Confidence                67889999999999999988875322  2358999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.74  E-value=2e-17  Score=117.36  Aligned_cols=99  Identities=21%  Similarity=0.458  Sum_probs=76.1

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +..+.++|++.+.||+|+||.||++.+.     .++..+|+|.+..... ......         +.+|+.++..+..||
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~~h~   71 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKA---------LMSELKILIHIGNHL   71 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHH---------HHHHHHHHHHhccCc
Confidence            4567789999999999999999999752     3456799998864321 111111         557999999994499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      ||+++++.+.     ...+.++++|||+++|+|.++++.
T Consensus        72 niv~~~~~~~-----~~~~~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          72 NVVNLLGACT-----KPNGPLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             ceeeEEeEec-----CCCCceEEEEecCCCCcHHHHHHh
Confidence            9999999873     334568999999999999999964

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0581|consensus

Probab=99.74  E-value=1.9e-17  Score=114.77  Aligned_cols=111  Identities=23%  Similarity=0.402  Sum_probs=92.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++.+.+..||+|..|.|+++.++.+++.+|+|.|.....  ....+.        +.+|+.++...+ ||+||++|++| 
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~--~~~~~Q--------i~rEl~il~~~~-spyIV~~ygaF-  146 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNID--PALQKQ--------ILRELEILRSCQ-SPYIVGFYGAF-  146 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCC--HHHHHH--------HHHHHHHHhhCC-CCCeeeEeEEE-
Confidence            467888999999999999999999999999999954322  222222        558999999997 99999999999 


Q ss_pred             ecCCCCCCc-eEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEED-QLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++ .++++||||++|+|.+++...    +.++|..+..++.+|++.
T Consensus       147 -----~~~~~~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~G  190 (364)
T KOG0581|consen  147 -----YSNGEEISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRG  190 (364)
T ss_pred             -----EeCCceEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHH
Confidence                 4555 599999999999999999543    359999999999998864

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=3.2e-17  Score=116.80  Aligned_cols=113  Identities=25%  Similarity=0.461  Sum_probs=93.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||++.+..+++.+|+|++............        .+..|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~e~~~l~~~~-~~~i~~~~~~~-   70 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIA--------HVRAERDILADAD-SPWIVKLYYSF-   70 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHH--------HHHHHHHHHHhcC-CCCccchhhhe-
Confidence            4799999999999999999999889999999998743211111111        1457899999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+++|+||||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~a  113 (350)
T cd05573          71 -----QDEEHLYLVMEYMPGGDLMNLLIRK----DVFPEETARFYIAELVLA  113 (350)
T ss_pred             -----ecCCeEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                 7788999999999999999998532    359999999999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.74  E-value=5.1e-17  Score=115.63  Aligned_cols=117  Identities=21%  Similarity=0.357  Sum_probs=93.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCC-CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETG-DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ....++|++.+.||+|+||.||++.+...+ ..+|+|.+............        .+.+|+.++..++ ||||+++
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~--------~~~~E~~~l~~l~-hp~Iv~~   96 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVD--------HVFSERKILNYIN-HPFCVNL   96 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHH--------HHHHHHHHHHhCC-CCCCcce
Confidence            345568999999999999999999876554 67999988643211111111        1457999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+.+|++|||+++|+|.++++.    +..+++..+..++.|++.|
T Consensus        97 ~~~~------~~~~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~a  143 (340)
T PTZ00426         97 YGSF------KDESYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLI  143 (340)
T ss_pred             EEEE------EeCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            9999      678899999999999999999853    2258999999999999876

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.74  E-value=5.7e-17  Score=116.61  Aligned_cols=118  Identities=19%  Similarity=0.326  Sum_probs=95.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++.+.||+|+||.||++.+..+++.+|+|++.+..........        .+.+|+.+++.++ ||||++
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~--------~~~~e~~i~~~~~-hp~iv~  107 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSA--------FFWEERDIMAFAN-SPWVVQ  107 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHH--------HHHHHHHHHHhCC-CCCCCe
Confidence            3455668999999999999999999999999999999998642211111110        1447888899888 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ...+.+|++|||++||+|.++++.   .  .+++..+..++.|++.|
T Consensus       108 ~~~~~------~~~~~~~lv~Ey~~gg~L~~~~~~---~--~~~~~~~~~~~~qi~~a  154 (371)
T cd05622         108 LFYAF------QDDRYLYMVMEYMPGGDLVNLMSN---Y--DVPEKWARFYTAEVVLA  154 (371)
T ss_pred             EEEEE------EcCCEEEEEEcCCCCCcHHHHHHh---c--CCCHHHHHHHHHHHHHH
Confidence            99999      678899999999999999998842   2  38999999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.73  E-value=6.7e-17  Score=117.23  Aligned_cols=99  Identities=20%  Similarity=0.405  Sum_probs=79.1

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|.+.+.||+|+||.||+|.+...     +..+|+|.+...... ....         .+.+|+.+++.+..|
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~---------~~~~Ei~~l~~l~~H  100 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS-SEKQ---------ALMSELKIMTHLGPH  100 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh-HHHH---------HHHHHHHHHHhcCCC
Confidence            4567788999999999999999999986432     346999988643221 1111         156899999999669


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      |||+++++++      ...+.+|++||||++|+|.+++..
T Consensus       101 pnIv~l~~~~------~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         101 LNIVNLLGAC------TKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             CCeeeEEEEE------ccCCceEEEEEecCCCcHHHHHHH
Confidence            9999999999      678889999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0659|consensus

Probab=99.73  E-value=1.7e-17  Score=110.94  Aligned_cols=111  Identities=30%  Similarity=0.469  Sum_probs=93.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|...+.+|+|.||.||++++..+|+.||+|.|+...........         ..+|+.+++.++ |+||+.+.++| 
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~t---------alREIK~Lqel~-h~nIi~LiD~F-   70 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRT---------ALREIKLLQELK-HPNIIELIDVF-   70 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHH---------HHHHHHHHHHcc-Ccchhhhhhhc-
Confidence            4688889999999999999999999999999999865433322222         568999999999 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                           ...+.+.+|+||++ .||...++   .....++..+++.|+.++++
T Consensus        71 -----~~~~~l~lVfEfm~-tdLe~vIk---d~~i~l~pa~iK~y~~m~Lk  112 (318)
T KOG0659|consen   71 -----PHKSNLSLVFEFMP-TDLEVVIK---DKNIILSPADIKSYMLMTLK  112 (318)
T ss_pred             -----cCCCceEEEEEecc-ccHHHHhc---ccccccCHHHHHHHHHHHHH
Confidence                 78899999999995 58888884   45557999999999998864

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.73  E-value=1.4e-16  Score=112.96  Aligned_cols=113  Identities=21%  Similarity=0.335  Sum_probs=93.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+.....  .....        .+.+|+.+++.++ ||||++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~--------~~~~E~~~l~~l~-h~~iv~~~~~   71 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRN--------QIIRELQVLHECN-SPYIVGFYGA   71 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC--HHHHH--------HHHHHHHHHHHCC-CCCCCeEEEE
Confidence            45789999999999999999999988999999998874321  11111        1557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++.++++|||+++|+|.+++..   . ..+++..+..++.|++.|
T Consensus        72 ~------~~~~~~~lv~e~~~~~~L~~~l~~---~-~~~~~~~~~~~~~~i~~~  115 (331)
T cd06649          72 F------YSDGEISICMEHMDGGSLDQVLKE---A-KRIPEEILGKVSIAVLRG  115 (331)
T ss_pred             E------EECCEEEEEeecCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            8      677889999999999999999853   1 248999999999998875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0612|consensus

Probab=99.73  E-value=3.2e-19  Score=137.54  Aligned_cols=119  Identities=24%  Similarity=0.313  Sum_probs=97.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .++-..++|.+++.||+|+||.|.+++.+.+++.||+|++.+-.+- +...       ...|-.|..+|.-.+ .++|++
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMl-Kr~~-------tA~F~EERDimv~~n-s~Wiv~  139 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEML-KRAE-------TACFREERDIMVFGN-SEWIVQ  139 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHh-hchh-------HHHHHHHhHHHHcCC-cHHHHH
Confidence            3456678999999999999999999999999999999988751111 0000       011557888888887 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..|      +++.++|+||||++||||..++..   .. .+|++.+++|++.+..|
T Consensus       140 LhyAF------QD~~~LYlVMdY~pGGDlltLlSk---~~-~~pE~~ArFY~aEiVlA  187 (1317)
T KOG0612|consen  140 LHYAF------QDERYLYLVMDYMPGGDLLTLLSK---FD-RLPEDWARFYTAEIVLA  187 (1317)
T ss_pred             HHHHh------cCccceEEEEecccCchHHHHHhh---cC-CChHHHHHHHHHHHHHH
Confidence            99999      899999999999999999999953   33 59999999999998766

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.73  E-value=2.2e-16  Score=109.45  Aligned_cols=129  Identities=47%  Similarity=0.815  Sum_probs=100.5

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +.++......++|++.+.||+|+||.||++.+..+++.+++|.+.........            +..|+.++..+.+||
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~------------~~~e~~~l~~l~~h~   75 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEE------------IEAEYNILKALSDHP   75 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHH------------HHHHHHHHHHHhcCC
Confidence            55677788899999999999999999999999888999999987542211111            336778888884499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |++++++.+..... ...+.++++|||+++++|.+++......+..+++..++.++.|+++|
T Consensus        76 ~i~~~~~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  136 (286)
T cd06638          76 NVVKFYGMYYKKDV-KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMG  136 (286)
T ss_pred             Ceeeeeeeeeeccc-CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHH
Confidence            99999998743221 24567999999999999999886543334468999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0192|consensus

Probab=99.73  E-value=5.2e-17  Score=115.64  Aligned_cols=117  Identities=28%  Similarity=0.408  Sum_probs=91.8

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCe-EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDH-VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~-~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .....++..+.+.+|+|+||.||++.++  |+. +|+|.+.......+. ..        .+.+|+.++.+++ ||||++
T Consensus        36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~--------~f~~E~~il~~l~-HpNIV~  103 (362)
T KOG0192|consen   36 EEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RK--------AFRREASLLSRLR-HPNIVQ  103 (362)
T ss_pred             eecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HH--------HHHHHHHHHHhCC-CCCeee
Confidence            3444555667777999999999999874  444 899998754333332 11        1668999999999 999999


Q ss_pred             eeeeeeecCCCCCCc-eEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEED-QLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ..+. .+++||||+++|+|.+++...  .+..++...+..++.||+++
T Consensus       104 f~G~~------~~~~~~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArG  154 (362)
T KOG0192|consen  104 FYGAC------TSPPGSLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARG  154 (362)
T ss_pred             EEEEE------cCCCCceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHH
Confidence            99999      4444 799999999999999999643  33469999999999999875

>KOG1187|consensus

Probab=99.73  E-value=2.3e-17  Score=117.79  Aligned_cols=123  Identities=31%  Similarity=0.435  Sum_probs=97.2

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..+++.++....++|.-...||+|+||.||+|.. .+++.+|||.+.......   ..+        +.+|+.++.+++ 
T Consensus        63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~---~~e--------F~~Ei~~ls~l~-  129 (361)
T KOG1187|consen   63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG---ERE--------FLNEVEILSRLR-  129 (361)
T ss_pred             ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc---hhH--------HHHHHHHHhcCC-
Confidence            3455666667778899889999999999999986 445889999776433220   111        557999999999 


Q ss_pred             CCCcceeeeeeeecCCCCCCc-eEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEED-QLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++|++++      ...+ +.+||+||+++|+|.+.+......  .++|.....|+.++++|
T Consensus       130 H~Nlv~LlGyC------~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~g  186 (361)
T KOG1187|consen  130 HPNLVKLLGYC------LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARG  186 (361)
T ss_pred             CcCcccEEEEE------ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHH
Confidence            99999999999      4455 699999999999999999532111  68999999999999886

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.73  E-value=9.9e-17  Score=113.80  Aligned_cols=113  Identities=21%  Similarity=0.343  Sum_probs=93.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+...... . ...        .+.+|+.+++.++ ||||++++++
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~-~~~--------~~~~E~~~l~~l~-h~~iv~~~~~   71 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP-A-IRN--------QIIRELQVLHECN-SPYIVGFYGA   71 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCH-H-HHH--------HHHHHHHHHHHCC-CCcccceeEE
Confidence            457899999999999999999999888999999988753211 1 111        1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...++++++|||+++|+|.+++..   . ..+++..+..++.|+++|
T Consensus        72 ~------~~~~~~~lv~e~~~~~~L~~~l~~---~-~~~~~~~~~~~~~~l~~~  115 (333)
T cd06650          72 F------YSDGEISICMEHMDGGSLDQVLKK---A-GRIPEQILGKVSIAVIKG  115 (333)
T ss_pred             E------EECCEEEEEEecCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            9      667899999999999999999853   2 258999999999998875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.73  E-value=1.2e-16  Score=113.31  Aligned_cols=114  Identities=25%  Similarity=0.350  Sum_probs=91.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++....++..+|+|.+.+.........   .     .+..|+.++..+. |++|+.+++.+ 
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~-----~~~~e~~~l~~~~-~~~i~~~~~~~-   70 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET---A-----CFREERDVLVNGD-NQWITTLHYAF-   70 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHH---H-----HHHHHHHHHhhCC-CCCEeeEEEEE-
Confidence            479999999999999999999988899999999864211111111   0     1456888888887 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|+||||+++|+|.++++..   +..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~a  114 (332)
T cd05623          71 -----QDENNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIA  114 (332)
T ss_pred             -----ecCCEEEEEEeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence                 7788999999999999999999532   2358999999999999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.72  E-value=9.7e-17  Score=111.22  Aligned_cols=109  Identities=18%  Similarity=0.222  Sum_probs=87.9

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||++.+..+++.+|+|.+............        .+..|+.+++.++ |||++++.+.+      ...
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~--------~~~~E~~il~~l~-~~~i~~~~~~~------~~~   65 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYE--------GAMVEKRILAKVH-SRFIVSLAYAF------QTK   65 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHH--------HHHHHHHHHHhCC-CCcEeeeeEEE------cCC
Confidence            69999999999999989999999998753222111111        1457899999998 99999999998      678


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+|++|||+++|+|.+++......+..+++..++.++.|+++|
T Consensus        66 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~  109 (280)
T cd05608          66 TDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG  109 (280)
T ss_pred             CeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence            88999999999999988885444444569999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.72  E-value=2.3e-16  Score=108.31  Aligned_cols=117  Identities=23%  Similarity=0.390  Sum_probs=95.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++....+++.+|+|.+.............        +.+|+.+++.+. |||++++++.+ 
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~-   71 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQD--------CVKEIDLLKQLN-HPNVIKYLDSF-   71 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHH--------HHHHHHHHHhCC-CcceeeeeeeE-
Confidence            57999999999999999999998899999999886432222211111        457999999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..++++||+++|+|.+++......+..+++..++.++.|+++|
T Consensus        72 -----~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  118 (267)
T cd08228          72 -----IEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSA  118 (267)
T ss_pred             -----EECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHH
Confidence                 56788999999999999999987655444468999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.72  E-value=1.2e-16  Score=112.92  Aligned_cols=113  Identities=23%  Similarity=0.295  Sum_probs=89.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++++.||+|+||.||++.+..+++.+|+|++.+..........        .+..|..++..+..|++++.+++++  
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~--------~~~~e~~~l~~~~~~~~i~~~~~~~--   70 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVE--------CTMVEKRVLALPGKPPFLTQLHSCF--   70 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhcCCCCceeeeEEEE--
Confidence            588999999999999999999888999999998753211111111        1446888888887456788999988  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.+|++|||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        71 ----~~~~~~~lv~E~~~~g~L~~~~~~---~-~~~~~~~~~~~~~qi~~a  113 (324)
T cd05587          71 ----QTMDRLYFVMEYVNGGDLMYHIQQ---V-GKFKEPHAVFYAAEIAIG  113 (324)
T ss_pred             ----EcCCEEEEEEcCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                677889999999999999988843   2 258999999999999876

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.72  E-value=2.3e-16  Score=109.78  Aligned_cols=113  Identities=21%  Similarity=0.277  Sum_probs=91.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.++....... ..         .+.+|+.+++.+. ||||+++++.
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~---------~~~~E~~~l~~l~-h~niv~~~~~   71 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA-PC---------TAIREVSLLKNLK-HANIVTLHDI   71 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc-ch---------hHHHHHHHHHhCC-CCCEeeEEEE
Confidence            35689999999999999999999988999999999864321111 10         1447999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||++ |+|.+++..   .+..+++..++.++.||++|
T Consensus        72 ~------~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~a  115 (288)
T cd07871          72 I------HTERCLTLVFEYLD-SDLKQYLDN---CGNLMSMHNVKIFMFQLLRG  115 (288)
T ss_pred             E------cCCCeEEEEEeCCC-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            8      67788999999996 588888843   23358999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.72  E-value=2.5e-16  Score=110.29  Aligned_cols=113  Identities=22%  Similarity=0.335  Sum_probs=91.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+..........          .+.+|+.+++.+. ||||++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~----------~~~~E~~~l~~l~-h~niv~~~~~   71 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPF----------TAIREASLLKGLK-HANIVLLHDI   71 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccch----------hHHHHHHHHhhCC-CCCcCeEEEE
Confidence            3478999999999999999999998899999999987432211111          1347899999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..+...+++|||+ +++|.+++..   ....+++..++.++.|++.|
T Consensus        72 ~------~~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~a  115 (303)
T cd07869          72 I------HTKETLTLVFEYV-HTDLCQYMDK---HPGGLHPENVKLFLFQLLRG  115 (303)
T ss_pred             E------ecCCeEEEEEECC-CcCHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            9      6788999999999 5688888743   22358999999999999886

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.72  E-value=1.3e-16  Score=112.69  Aligned_cols=113  Identities=24%  Similarity=0.303  Sum_probs=89.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|...+.||+|+||.||++.+..+++.+|+|++.+..........        .+..|..++..+..|++++++++++  
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~e~~~l~~~~~~~~i~~~~~~~--   70 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVE--------CTMVEKRVLALQDKPPFLTQLHSCF--   70 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhccCCCchhheeeEE--
Confidence            477889999999999999999899999999998753211111111        1346777888777578899999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.+|+||||++||+|.+++..   . ..+++..++.++.|++.|
T Consensus        71 ----~~~~~~~lv~Ey~~~g~L~~~i~~---~-~~l~~~~~~~i~~qi~~a  113 (323)
T cd05615          71 ----QTVDRLYFVMEYVNGGDLMYHIQQ---V-GKFKEPQAVFYAAEISVG  113 (323)
T ss_pred             ----ecCCEEEEEEcCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                678889999999999999988843   1 259999999999999876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.72  E-value=1.4e-16  Score=112.91  Aligned_cols=108  Identities=23%  Similarity=0.346  Sum_probs=87.0

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|.+++...........        +..|..++..+..||||+++++++      .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~--------~~~e~~il~~~~~hp~Iv~~~~~~------~   66 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDW--------VQTEKHVFETASNHPFLVGLHSCF------Q   66 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHH--------HHHHHHHHHhccCCCCCCceEEEE------E
Confidence            36899999999999999999999999997533222111111        446888888885599999999999      7


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        67 ~~~~~~lv~e~~~~g~L~~~~~~---~-~~l~~~~~~~~~~qi~~~  108 (329)
T cd05588          67 TESRLFFVIEFVSGGDLMFHMQR---Q-RKLPEEHARFYSAEISLA  108 (329)
T ss_pred             cCCEEEEEEeCCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888742   2 259999999999999876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.72  E-value=6.8e-17  Score=116.37  Aligned_cols=99  Identities=24%  Similarity=0.386  Sum_probs=77.7

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEE-----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKD-----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|++.+.||+|+||.||++..     ..++..+|+|.++....... ..         .+.+|+.++..+..|
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~-~~---------~~~~Ei~il~~l~~H   98 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTE-RE---------ALMSELKVLSYLGNH   98 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHH-HH---------HHHHHHHHHHHhcCC
Confidence            3455677899999999999999999974     23456799998864322111 11         155799999999449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      |||+++++.+      ...+..+++|||+++|+|.++++.
T Consensus        99 pnIv~l~~~~------~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104          99 INIVNLLGAC------TVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             cceeeeeeee------ccCCcceeeehhccCCcHHHHHHh
Confidence            9999999999      678889999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.72  E-value=1.8e-16  Score=109.97  Aligned_cols=112  Identities=26%  Similarity=0.394  Sum_probs=89.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.++.++..+|+|.+............         +.+|+.++..+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~~-   69 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKET---------TLRELKMLRTLK-QENIVELKEAF-   69 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhh---------HHHHHHHHHhCC-CccccchhhhE-
Confidence            3699999999999999999999889999999998754322111111         447999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||++++.+..+.+    ....+++..++.++.|++.|
T Consensus        70 -----~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~  112 (287)
T cd07848          70 -----RRRGKLYLVFEYVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKA  112 (287)
T ss_pred             -----ecCCEEEEEEecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHH
Confidence                 77889999999998776544432    22359999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.71  E-value=1.2e-16  Score=112.91  Aligned_cols=107  Identities=26%  Similarity=0.371  Sum_probs=86.8

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|++..........   ..     .+.+|+.+++.+. ||||+++++.+      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~---~~-----~~~~e~~~l~~l~-hp~i~~~~~~~------~   65 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDE---VA-----HTLTESRVLQNTR-HPFLTALKYSF------Q   65 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHH---HH-----HHHHHHHHHHhCC-CCCCCCEEEEE------E
Confidence            36899999999999998999999999987532111111   11     1457899999998 99999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.+++..    +..+++..++.++.||+.|
T Consensus        66 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~  107 (323)
T cd05571          66 THDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSA  107 (323)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988842    2358999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.71  E-value=2.7e-16  Score=111.06  Aligned_cols=113  Identities=23%  Similarity=0.300  Sum_probs=89.4

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+.+...........        ...|..++..+..|++++.+++++  
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~l~~~~~~~~i~~~~~~~--   70 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVEC--------TMVEKRVLALSGKPPFLTQLHSCF--   70 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHH--------HHHHHHHHHhccCCCeEeeEEEEE--
Confidence            5889999999999999999998889999999987532111111111        335667777665589999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.+|+||||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        71 ----~~~~~~~lv~E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~a  113 (323)
T cd05616          71 ----QTMDRLYFVMEYVNGGDLMYQIQQV----GRFKEPHAVFYAAEIAIG  113 (323)
T ss_pred             ----ecCCEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                6788999999999999999888432    258999999999999876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.71  E-value=2.1e-16  Score=111.71  Aligned_cols=110  Identities=24%  Similarity=0.361  Sum_probs=86.0

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH---HhccCCCCCcceeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV---LKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~~~~~~i~~l~~~~   98 (152)
                      |++++.||+|+||.||++.+..+++.+|+|.+++..........   .     +.+|..+   +..+. ||||+++++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~---~-----l~~e~~~~~~~~~l~-hp~i~~~~~~~   71 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVE---S-----LMCEKRIFETANSER-HPFLVNLFACF   71 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH---H-----HHHHHHHHHhccccC-CCChhceeeEE
Confidence            67899999999999999999889999999999753211111111   1     3345444   34566 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.+|+||||+++|+|..+++   .  ..+++..++.++.|++.|
T Consensus        72 ------~~~~~~~lv~E~~~~~~L~~~~~---~--~~l~~~~~~~~~~qi~~a  113 (324)
T cd05589          72 ------QTEDHVCFVMEYAAGGDLMMHIH---T--DVFSEPRAVFYAACVVLG  113 (324)
T ss_pred             ------EcCCEEEEEEcCCCCCcHHHHhh---c--CCCCHHHHHHHHHHHHHH
Confidence                  67889999999999999988773   2  259999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.71  E-value=3e-16  Score=116.28  Aligned_cols=115  Identities=17%  Similarity=0.287  Sum_probs=92.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCC-CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVET-GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ...|.+.+.||+|+||.||++....+ +..+++|.+....  ......         +..|+.+++.++ ||||+++++.
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~---------~~~E~~~l~~l~-Hpniv~~~~~  133 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAY---------ARSELHCLAACD-HFGIVKHFDD  133 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHH---------HHHHHHHHHhCC-CCCEeEEEEE
Confidence            33499999999999999999998776 6778888764321  111111         447999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|+||||++||+|.++++........+++..+..++.|++.|
T Consensus       134 ~------~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  181 (478)
T PTZ00267        134 F------KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLA  181 (478)
T ss_pred             E------EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence            9      67889999999999999999986544444469999999999999876

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.71  E-value=1.3e-16  Score=112.78  Aligned_cols=107  Identities=24%  Similarity=0.361  Sum_probs=86.4

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|.+...........   .     .+.+|+.+++.+. ||||+++++.+      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~---~-----~~~~E~~~l~~l~-hp~i~~~~~~~------~   65 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEV---A-----HTVTESRVLQNTR-HPFLTALKYAF------Q   65 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHH---H-----HHHHHHHHHHhCC-CCCCcceeeEE------e
Confidence            368999999999999988999999999874321111111   1     1457899999998 99999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+||||+++|+|..++..    +..+++..++.++.|++.|
T Consensus        66 ~~~~~~lv~E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~a  107 (323)
T cd05595          66 THDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSA  107 (323)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888742    2258999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.71  E-value=3e-16  Score=109.85  Aligned_cols=117  Identities=23%  Similarity=0.357  Sum_probs=89.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC----------------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE----------------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV   81 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~   81 (152)
                      +.++|.+.+.||+|+||.||+|.+..                ++..+|+|.+.....  .....        .+.+|+.+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~--------~~~~E~~~   72 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN--KNARN--------DFLKEVKI   72 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC--HHHHH--------HHHHHHHH
Confidence            45789999999999999999997532                234689998865322  11111        15579999


Q ss_pred             HhccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh---------------CCCCCCHHHHHHHHH
Q psy2812          82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---------------RGVSLSEDQIAYILY  146 (152)
Q Consensus        82 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~l~~~~~~~~~~  146 (152)
                      +..+. ||||+++++.+      ...+..+++|||+++|+|.+++.....               ....+++..++.++.
T Consensus        73 l~~l~-h~niv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (304)
T cd05096          73 LSRLK-DPNIIRLLGVC------VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVAL  145 (304)
T ss_pred             HhhcC-CCCeeEEEEEE------ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHH
Confidence            99998 99999999999      567789999999999999999854221               112467888999999


Q ss_pred             hhhcc
Q psy2812         147 GTVQV  151 (152)
Q Consensus       147 qi~~a  151 (152)
                      ||+.|
T Consensus       146 ~i~~a  150 (304)
T cd05096         146 QIASG  150 (304)
T ss_pred             HHHHH
Confidence            99876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=5.5e-16  Score=115.26  Aligned_cols=129  Identities=14%  Similarity=0.251  Sum_probs=98.8

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      .......++|.+.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.++..+. |++++
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~---------~~~Ei~~l~~~~-h~~iv   94 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNR---------AQAEVCCLLNCD-FFSIV   94 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHH---------HHHHHHHHhcCC-CCcEE
Confidence            34456678999999999999999999999889999999999754333222211         457888898888 99999


Q ss_pred             eeeeeeeecCC--CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGG--QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++..+.....  ......++++|||+++|+|.+++.........+++..+..++.|++.|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~a  155 (496)
T PTZ00283         95 KCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA  155 (496)
T ss_pred             EeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence            99887743211  011224789999999999999996544444569999999999999876

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.71  E-value=6.9e-16  Score=105.50  Aligned_cols=117  Identities=27%  Similarity=0.469  Sum_probs=94.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||.|+||.||++.+..++..+++|.+............         +..|+.+++.+. |||++++++.+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~~~   70 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQ---------LVSEVNILRELK-HPNIVRYYDRIID   70 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHH---------HHHHHHHHHhcC-CCccceeeeeeec
Confidence            588999999999999999999889999999988754333222211         457889999998 9999999987742


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          .....++++|||+++++|.+++......+..+++..++.++.|++.|
T Consensus        71 ----~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~  117 (265)
T cd08217          71 ----RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA  117 (265)
T ss_pred             ----CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence                34567899999999999999997655545579999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.71  E-value=4e-16  Score=109.50  Aligned_cols=111  Identities=23%  Similarity=0.324  Sum_probs=91.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..++..+++|.+.....  .....        .+.+|+.++..+. ||||+++++.+ 
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~--------~~~~E~~~l~~l~-h~~iv~~~~~~-   68 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK--PAIRN--------QIIRELKVLHECN-SPYIVGFYGAF-   68 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC--HHHHH--------HHHHHHHHHHhCC-CCCCCeEEEEE-
Confidence            368999999999999999999988888999998764321  11111        1457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++.++++|||+++++|.++++..    ..+++..+..++.|+++|
T Consensus        69 -----~~~~~~~lv~ey~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~  111 (308)
T cd06615          69 -----YSDGEISICMEHMDGGSLDQVLKKA----GRIPENILGKISIAVLRG  111 (308)
T ss_pred             -----eeCCEEEEEeeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                 6788999999999999999998532    258999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG1026|consensus

Probab=99.71  E-value=2.4e-17  Score=124.11  Aligned_cols=121  Identities=27%  Similarity=0.460  Sum_probs=95.5

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      .....++.+....+.||+|.||+||+++.-.     ....||||.++.....  +..++        |.+|+.++..++ 
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~d--------F~REaeLla~l~-  547 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQD--------FRREAELLAELQ-  547 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHH--------HHHHHHHHHhcc-
Confidence            4456778889999999999999999997532     3356899988743221  12222        668999999999 


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC----------CCCCCHHHHHHHHHhhhc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR----------GVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----------~~~l~~~~~~~~~~qi~~  150 (152)
                      |||||++++++      ...+.+|||+|||..|||.++|+.....          ..+|+..+.+.++.||+.
T Consensus       548 H~nIVrLlGVC------~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAa  614 (774)
T KOG1026|consen  548 HPNIVRLLGVC------REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAA  614 (774)
T ss_pred             CCCeEEEEEEE------ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999      6788899999999999999999753321          123889999999999974

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.70  E-value=3.8e-16  Score=110.67  Aligned_cols=114  Identities=21%  Similarity=0.397  Sum_probs=89.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +|++.+.||+|+||.||++...   .++..+|+|.+.+..........  .     .+..|+.++..+..||+|+++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~--~-----~~~~e~~~l~~l~~~~~i~~~~~~   73 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTV--E-----HTRTERNVLEHVRQSPFLVTLHYA   73 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHH--H-----HHHHHHHHHHhccCCCCcccEEEE
Confidence            5889999999999999998864   46788999998743211111111  1     145788899998669999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.++++|||+++|+|.+++..   . ..+++..++.++.||+.|
T Consensus        74 ~------~~~~~~~lv~e~~~~g~L~~~l~~---~-~~~~~~~~~~~~~qi~~~  117 (332)
T cd05614          74 F------QTEAKLHLILDYVSGGEMFTHLYQ---R-DNFSEDEVRFYSGEIILA  117 (332)
T ss_pred             E------ecCCEEEEEEeCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            8      778889999999999999998842   2 258999999999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.70  E-value=5.8e-16  Score=109.77  Aligned_cols=115  Identities=29%  Similarity=0.523  Sum_probs=89.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.++ ||||+++++++..
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpniv~~~~~~~~   70 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATR---------ILREIKLLRLLR-HPDIVEIKHIMLP   70 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHH---------HHHHHHHHHhCC-CCCEeeecceEec
Confidence            589999999999999999999889999999988643222111111         457999999998 9999999988753


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ... .....+|++|||+ +++|.+++..    +..+++..++.++.|+++|
T Consensus        71 ~~~-~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~a  115 (338)
T cd07859          71 PSR-REFKDIYVVFELM-ESDLHQVIKA----NDDLTPEHHQFFLYQLLRA  115 (338)
T ss_pred             cCC-CCCceEEEEEecC-CCCHHHHHHh----cccCCHHHHHHHHHHHHHH
Confidence            221 2234689999999 5788888742    2259999999999999886

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.70  E-value=2.6e-16  Score=111.44  Aligned_cols=107  Identities=27%  Similarity=0.380  Sum_probs=86.9

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|++............        .+.+|+.+++.+. ||||+++++.+      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~--------~~~~E~~~l~~l~-hp~iv~~~~~~------~   65 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVA--------HTLTESRVLKNTR-HPFLTSLKYSF------Q   65 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhCC-CCCCcceEEEE------E
Confidence            3689999999999999899999999998753221111111        1457889999998 99999999999      7


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+||||+++|+|.+++..    ...+++..++.++.||+.|
T Consensus        66 ~~~~~~lv~Ey~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~a  107 (328)
T cd05593          66 TKDRLCFVMEYVNGGELFFHLSR----ERVFSEDRTRFYGAEIVSA  107 (328)
T ss_pred             cCCEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888742    2258999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0663|consensus

Probab=99.70  E-value=2.2e-17  Score=113.57  Aligned_cols=117  Identities=26%  Similarity=0.332  Sum_probs=95.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..-+.|+.+..|++|+||.||+++++.+++.||+|.++.......--..         ..+|+.++.+.+ |||||.+-.
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPIt---------sLREIniLl~~~-H~NIV~vkE  142 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPIT---------SLREINILLKAR-HPNIVEVKE  142 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcch---------hHHHHHHHHhcC-CCCeeeeEE
Confidence            4456799999999999999999999999999999999864432221111         468999999999 999999988


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..-    ..-+.+|||||||+ .||..++..++   ++|...+++.++.|++++
T Consensus       143 VVvG----~~~d~iy~VMe~~E-hDLksl~d~m~---q~F~~~evK~L~~QlL~g  189 (419)
T KOG0663|consen  143 VVVG----SNMDKIYIVMEYVE-HDLKSLMETMK---QPFLPGEVKTLMLQLLRG  189 (419)
T ss_pred             EEec----cccceeeeeHHHHH-hhHHHHHHhcc---CCCchHHHHHHHHHHHHH
Confidence            8753    34456999999996 58888886554   469999999999999876

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.70  E-value=1.3e-15  Score=105.91  Aligned_cols=117  Identities=26%  Similarity=0.423  Sum_probs=94.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|...+.||.|++|.||++.+..+++.+++|.+......  .....        +.+|+.+++.+. ||||+++++.+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~--------~~~e~~~l~~l~-h~~iv~~~~~~~   69 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQ--------ILRELEINKSCK-SPYIVKYYGAFL   69 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHH--------HHHHHHHHHhCC-CCCeeeeeeEEE
Confidence            4688999999999999999999888999999988753221  11111        457899999998 999999999874


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .    ...+.++++|||+++++|.+++.........+++..+..++.|++.|
T Consensus        70 ~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~  117 (287)
T cd06621          70 D----ESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKG  117 (287)
T ss_pred             c----cCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            3    34567999999999999999987655545568999999999999876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.70  E-value=6.9e-16  Score=107.25  Aligned_cols=114  Identities=21%  Similarity=0.265  Sum_probs=92.0

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|+..+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.++..++ |++++.+++.+  
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~--------~~~E~~il~~l~-~~~i~~~~~~~--   69 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESM--------ALNEKQILEKVN-SRFVVSLAYAY--   69 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHH--------HHHHHHHHHhCC-CCCeeeeeEEE--
Confidence            3778899999999999999999999999999887533221111111        346899999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.++++|||+++++|.+++.....  ..+++..+..++.|++.|
T Consensus        70 ----~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~  114 (285)
T cd05630          70 ----ETKDALCLVLTLMNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCG  114 (285)
T ss_pred             ----ecCCEEEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHH
Confidence                677899999999999999998854332  248999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.70  E-value=1.7e-16  Score=112.30  Aligned_cols=110  Identities=29%  Similarity=0.404  Sum_probs=88.8

Q ss_pred             EEEEeecc--ceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          24 LQELIGEG--TYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        24 ~~~~lg~G--~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      +++.||+|  +|+.||++.++.+++.+|+|.+............         +.+|+.+++.++ ||||+++++.+   
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-hpniv~~~~~~---   68 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTF---------LQGELHVSKLFN-HPNIVPYRATF---   68 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHH---------HHHHHHHHHhcC-CCCeeeEEEEE---
Confidence            46789999  7889999999999999999998754322221111         457899999998 99999999999   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ..++..+++|||+++|+|.+++.....  ..+++..++.++.|++.|
T Consensus        69 ---~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~  113 (327)
T cd08227          69 ---IADNELWVVTSFMAYGSAKDLICTHFM--DGMSELAIAYILQGVLKA  113 (327)
T ss_pred             ---EECCEEEEEEeccCCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHH
Confidence               677889999999999999999964322  248999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.70  E-value=8.4e-16  Score=105.42  Aligned_cols=117  Identities=25%  Similarity=0.388  Sum_probs=95.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++....+++.+++|.++............        +.+|+.+++.+. |++++++++.+ 
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~--------~~~ei~~l~~~~-~~~i~~~~~~~-   71 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQD--------CLKEIDLLKQLD-HPNVIKYLASF-   71 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHH--------HHHHHHHHHhCC-CCCeeeeeeee-
Confidence            57999999999999999999998889999999886432222111111        457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++|||+++|+|.+++......+..+++..++.++.|+++|
T Consensus        72 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  118 (267)
T cd08224          72 -----IENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSA  118 (267)
T ss_pred             -----ecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHH
Confidence                 66788999999999999999987554444568999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.70  E-value=2.5e-16  Score=111.31  Aligned_cols=107  Identities=27%  Similarity=0.373  Sum_probs=86.2

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|.+............        .+..|+.++..+. ||||+++++.+      .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~--------~~~~e~~~l~~~~-hp~i~~~~~~~------~   65 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--------HTLTENRVLQNSR-HPFLTALKYSF------Q   65 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH--------HHHHHHHHHHhCC-CCCCCceEEEE------E
Confidence            3689999999999999899999999999753221111111        1456888899998 99999999998      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+||||+++|+|.+++..    +..+++..++.++.||+.|
T Consensus        66 ~~~~~~lv~E~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~a  107 (325)
T cd05594          66 THDRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSA  107 (325)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888742    2258999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0587|consensus

Probab=99.70  E-value=7.8e-16  Score=116.59  Aligned_cols=129  Identities=49%  Similarity=0.833  Sum_probs=107.1

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ....++.+..+.+.|.+.+.||.|.+|+||++..+.+++..|+|++.......++..            -|..+++....
T Consensus         7 ~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE------------~eynil~~~~~   74 (953)
T KOG0587|consen    7 MDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIE------------LEYNMLKKYSH   74 (953)
T ss_pred             cccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHH------------HHHHHHHhccC
Confidence            345677888999999999999999999999999999999999999876544444333            37778888878


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||++.++++|.-+.- -.++.+|||||||.||+..|+++...  +..+.|..+.+|++.++.+
T Consensus        75 hpnv~~fyg~~~k~~~-~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrg  135 (953)
T KOG0587|consen   75 HPNVATFYGAFIKKDP-GNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRG  135 (953)
T ss_pred             CCCcceEEEEEEEecC-CCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHH
Confidence            9999999999876432 25678999999999999999998766  5579999999999988764

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.70  E-value=2.4e-16  Score=111.10  Aligned_cols=106  Identities=18%  Similarity=0.461  Sum_probs=84.9

Q ss_pred             EEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|+||.||++.+.   .+++.+|+|++...........         .+..|+.++..+. ||||+++++.+    
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~---------~~~~E~~~l~~l~-h~niv~~~~~~----   67 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRV---------RTKMERDILAEVN-HPFIVKLHYAF----   67 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHH---------HHHHHHHHHHhCC-CCCcccEEEEE----
Confidence            57999999999998763   5678999999875321111111         1457899999998 99999999999    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        ...+.+|++|||+++|+|.+++..    +..+++..++.++.|+++|
T Consensus        68 --~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~  110 (318)
T cd05582          68 --QTEGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALA  110 (318)
T ss_pred             --EcCCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence              678899999999999999998842    2358999999999999876

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.69  E-value=1e-15  Score=104.53  Aligned_cols=112  Identities=24%  Similarity=0.488  Sum_probs=91.6

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..++..+++|.++..... .....         +..|+.+++.+. |||++++++.+  
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~--   67 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-SAVED---------SRKEAVLLAKMK-HPNIVAFKESF--   67 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-HHHHH---------HHHHHHHHHhCC-CCCcceEEEEE--
Confidence            588999999999999999999889999999998643221 11111         446888899998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          +..+.+|++|||+++|+|.+++...  .+..+++..++.++.|++.|
T Consensus        68 ----~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~a  112 (255)
T cd08219          68 ----EADGHLYIVMEYCDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLG  112 (255)
T ss_pred             ----EECCEEEEEEeeCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHH
Confidence                7788999999999999999988532  23358999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.69  E-value=2.5e-16  Score=113.37  Aligned_cols=99  Identities=22%  Similarity=0.413  Sum_probs=78.0

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|++.+.||+|+||.||++.+...     +..+|+|.+...... ....         .+.+|+.+++.+..|
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~---------~~~~E~~il~~l~~h  101 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DERE---------ALMSELKILSHLGQH  101 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHH---------HHHHHHHHHHhhccC
Confidence            4456677899999999999999999986433     347999998743221 1111         155799999998449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      +||+++++.+      ...+.++++|||+++|+|.++++.
T Consensus       102 ~nIv~~~~~~------~~~~~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         102 KNIVNLLGAC------THGGPVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             CceeeEeeEe------cCCCCeEEeHhhccCCcHHHHHHh
Confidence            9999999999      678889999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0198|consensus

Probab=99.69  E-value=2.3e-16  Score=109.82  Aligned_cols=113  Identities=30%  Similarity=0.479  Sum_probs=92.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|...+.||+|+||.||++.+..++...|+|.+.......      ..     ++.+|+.+|..++ |||||++++..
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~------~~-----~l~~Ei~iL~~l~-~p~IV~~~G~~   83 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT------SE-----SLEREIRILSRLN-HPNIVQYYGSS   83 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh------HH-----HHHHHHHHHHhCC-CCCEEeeCCcc
Confidence            567899999999999999999998889999999987642211      11     1568999999999 99999999975


Q ss_pred             eecCCCCCC-ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEE-DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .     ... ..++++|||+++|+|.+++.....   .|+++.++.+..||++.
T Consensus        84 ~-----~~~~~~~~i~mEy~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~G  129 (313)
T KOG0198|consen   84 S-----SRENDEYNIFMEYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEG  129 (313)
T ss_pred             c-----cccCeeeEeeeeccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHH
Confidence            2     122 379999999999999999964332   59999999999999864

>KOG4236|consensus

Probab=99.69  E-value=1.4e-16  Score=115.71  Aligned_cols=109  Identities=22%  Similarity=0.469  Sum_probs=92.9

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .+.||+|.||.||-+.++.+|+.||+|.|.+.+-..+....         +..|+++++.++ ||.||.+.-.|      
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesq---------lR~EVaILq~l~-HPGiV~le~M~------  632 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQ---------LRNEVAILQNLH-HPGIVNLECMF------  632 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHH---------HHHHHHHHHhcC-CCCeeEEEEee------
Confidence            46899999999999999999999999999876544433322         558999999999 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++++.+++|||-+ +||+.+.+  +......|++...++++.||+.|+
T Consensus       633 ET~ervFVVMEKl-~GDMLEMI--LSsEkgRL~er~TkFlvtQIL~AL  677 (888)
T KOG4236|consen  633 ETPERVFVVMEKL-HGDMLEMI--LSSEKGRLPERITKFLVTQILVAL  677 (888)
T ss_pred             cCCceEEEEehhh-cchHHHHH--HHhhcccchHHHHHHHHHHHHHHH
Confidence            9999999999999 77888887  344455799999999999998773

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.69  E-value=1.1e-15  Score=106.27  Aligned_cols=114  Identities=19%  Similarity=0.267  Sum_probs=91.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|+..+.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.+++.++ |++++.+.+.+  
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~--------~~~~E~~il~~l~-~~~i~~~~~~~--   69 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGES--------MALNEKQILEKVN-SQFVVNLAYAY--   69 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHH--------HHHHHHHHHHHcC-CcCceeEEEEE--
Confidence            367889999999999999999889999999998753221111111        1457999999998 99999999988  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++....  +..+++..+..++.|++.|
T Consensus        70 ----~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~  114 (285)
T cd05632          70 ----ETKDALCLVLTIMNGGDLKFHIYNMG--NPGFEEERALFYAAEILCG  114 (285)
T ss_pred             ----ecCCEEEEEEEeccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHH
Confidence                67888999999999999998885432  2359999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=3e-16  Score=110.34  Aligned_cols=105  Identities=17%  Similarity=0.238  Sum_probs=85.2

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||++.+..++..+|+|.+...........   .     .+..|+.++..++ ||||+++++.+      ...
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~---~-----~~~~E~~~l~~l~-h~~iv~~~~~~------~~~   65 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEV---T-----HTLAERTVLAQVN-CPFIVPLKFSF------QSP   65 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHH---H-----HHHHHHHHHHhCC-CCcEeceeeEE------ecC
Confidence            6999999999999988999999999874321111111   1     1457899999998 99999999998      678


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..|++|||+++|+|.+++..    ...+++..++.++.|++.|
T Consensus        66 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~  105 (312)
T cd05585          66 EKLYLVLAFINGGELFHHLQR----EGRFDLSRARFYTAELLCA  105 (312)
T ss_pred             CeEEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            899999999999999999853    2258999999999999876

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.69  E-value=5.9e-16  Score=106.30  Aligned_cols=115  Identities=24%  Similarity=0.370  Sum_probs=92.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|+..+.||+|++|.||++.+..+++.+++|.+................     +.+|+.+++.+. |+|++++++.+  
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~-----~~~e~~~l~~l~-h~~iv~~~~~~--   72 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEA-----LRKEIRLMARLN-HPHIIRMLGAT--   72 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHH-----HHHHHHHHHHcC-CCceehhhcee--
Confidence            4778899999999999999998899999999987543222111111111     568999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..++++||+++++|.+++..   . ..+++..++.++.|++.|
T Consensus        73 ----~~~~~~~~v~e~~~~~~L~~~l~~---~-~~~~~~~~~~~~~ql~~a  115 (268)
T cd06630          73 ----CEDSHFNLFVEWMAGGSVSHLLSK---Y-GAFKEAVIINYTEQLLRG  115 (268)
T ss_pred             ----ccCCeEEEEEeccCCCcHHHHHHH---h-CCCCHHHHHHHHHHHHHH
Confidence                778899999999999999999853   2 258999999999999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.69  E-value=1.2e-15  Score=103.97  Aligned_cols=113  Identities=27%  Similarity=0.367  Sum_probs=93.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|.+.+.||+|++|.||++....++..+++|.+............         +.+|+.+++.+. |||++++++.+  
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~--   68 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREE---------AIDEARVLAKLD-SSYIIRYYESF--   68 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHH---------HHHHHHHHHhcC-CCCeehheeee--
Confidence            588899999999999999999889999999998754322222111         457889999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++...  .+..+++..+..++.|++.|
T Consensus        69 ----~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~a  113 (256)
T cd08529          69 ----LDKGKLNIVMEYAENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLG  113 (256)
T ss_pred             ----ccCCEEEEEEEeCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHH
Confidence                6778899999999999999999643  23358999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.69  E-value=3.1e-16  Score=113.78  Aligned_cols=99  Identities=22%  Similarity=0.442  Sum_probs=78.9

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|.+.+.||+|+||.||++.+..     .+..+|+|.+...... ....         .+.+|+.++..+.+|
T Consensus        31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~---------~~~~E~~~l~~l~~H  100 (401)
T cd05107          31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQ---------ALMSELKIMSHLGPH  100 (401)
T ss_pred             cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHH---------HHHHHHHHHHhcCCC
Confidence            356677889999999999999999998642     3457999998743221 1111         145799999999779


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      |||+++++.+      ...+.++++|||+++|+|.++++.
T Consensus       101 ~niv~~~~~~------~~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         101 LNIVNLLGAC------TKGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             CCeEEEEEEE------ccCCCcEEEEeccCCCcHHHHHHh
Confidence            9999999999      677889999999999999999964

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.69  E-value=2.4e-15  Score=104.62  Aligned_cols=128  Identities=44%  Similarity=0.810  Sum_probs=98.9

Q ss_pred             cccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          11 NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        11 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ...+...+.++|.+.+.||+|+||.||++....+++.+++|.+.........            +.+|+.++..+.+|||
T Consensus        13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~------------~~~e~~~l~~l~~h~n   80 (291)
T cd06639          13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEE------------IEAEYNILQSLPNHPN   80 (291)
T ss_pred             hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHH------------HHHHHHHHHHhcCCCC
Confidence            3345556788999999999999999999999889999999988643211111            3367788888845999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++.+...+. ...+..+++|||+++|+|.++++.....+..+++..++.++.|++.|
T Consensus        81 i~~~~~~~~~~~~-~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  140 (291)
T cd06639          81 VVKFYGMFYKADK-LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG  140 (291)
T ss_pred             eEEEEEEEEeccc-cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence            9999998853221 12357999999999999999987544444468999999999999876

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.69  E-value=5.6e-16  Score=106.45  Aligned_cols=113  Identities=37%  Similarity=0.679  Sum_probs=92.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.++|++.+.||+|+||.||++.+..+++.+|+|.+........  ..         +.+|+.++..+. |||++++++
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~--~~---------~~~e~~~l~~~~-h~~ii~~~~   73 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF--SL---------IQQEIFMVKECK-HCNIVAYFG   73 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchH--HH---------HHHHHHHHHhcC-CCCeeeeeE
Confidence            456789999999999999999999988899999998864322111  10         447888999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++++|.++++.   . ..+++..+..++.|+++|
T Consensus        74 ~~------~~~~~~~iv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~qi~~~  118 (267)
T cd06646          74 SY------LSREKLWICMEYCGGGSLQDIYHV---T-GPLSELQIAYVCRETLQG  118 (267)
T ss_pred             EE------EeCCEEEEEEeCCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            98      567889999999999999998842   2 258999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.69  E-value=1e-15  Score=105.91  Aligned_cols=114  Identities=23%  Similarity=0.442  Sum_probs=88.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH-HhccCCCCCcceeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV-LKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~i~~l~~~~   98 (152)
                      ++|++.+.||+|+||.||++.+..++..+|+|.++..........          ...|... ++.++ |||++++++.+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~----------~~~e~~~~~~~~~-~~~iv~~~~~~   69 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKR----------LLMDLDISMRSVD-CPYTVTFYGAL   69 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHH----------HHHHHHHHHHHcC-CCCeeeeeEEE
Confidence            478999999999999999999998999999999875432221111          2234444 44455 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..|++|||++ |+|.++++.....+..+++..++.++.|++.|
T Consensus        70 ------~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~  115 (283)
T cd06617          70 ------FREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKA  115 (283)
T ss_pred             ------ecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence                  67788999999995 78888886544444569999999999999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.69  E-value=2.7e-16  Score=111.00  Aligned_cols=108  Identities=23%  Similarity=0.370  Sum_probs=85.1

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.++.+++.+|+|.+.+...........        +..|..++..+..||||+++++++      .
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~l~~~~~h~~iv~~~~~~------~   66 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVEC--------TMTEKRILSLARNHPFLTQLYCCF------Q   66 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHH--------HHHHHHHHHhccCCCchhceeeEE------E
Confidence            36899999999999998899999999987532111111111        346777777765599999999999      7


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.++++.   . ..+++..++.++.|++.|
T Consensus        67 ~~~~~~iv~Ey~~~g~L~~~i~~---~-~~l~~~~~~~~~~ql~~~  108 (320)
T cd05590          67 TPDRLFFVMEFVNGGDLMFHIQK---S-RRFDEARARFYAAEITSA  108 (320)
T ss_pred             cCCEEEEEEcCCCCchHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988853   2 258999999999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG1095|consensus

Probab=99.69  E-value=5.1e-16  Score=120.60  Aligned_cols=117  Identities=22%  Similarity=0.420  Sum_probs=93.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCC-----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGD-----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+++..+....||+|.||.||.|.......     .||+|.+++.....+...          |.+|..+|+.++ ||||
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~----------Fl~Ea~~m~~f~-HpNi  757 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSD----------FLKEALLMSKFD-HPNI  757 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHH----------HHHHHHHHhcCC-Ccce
Confidence            557788999999999999999999875433     388888875433222221          778999999999 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC---CCCCCHHHHHHHHHhhhc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR---GVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~~~~qi~~  150 (152)
                      ++++++.      -.....++++|||+||||..+|+..+..   ...++...++.++.|||+
T Consensus       758 v~liGv~------l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~  813 (1025)
T KOG1095|consen  758 VSLIGVC------LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAK  813 (1025)
T ss_pred             eeEEEee------cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhh
Confidence            9999999      4578899999999999999999753211   336899999999999975

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.69  E-value=3.2e-16  Score=107.02  Aligned_cols=110  Identities=37%  Similarity=0.661  Sum_probs=91.3

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++++.||+|+||.||++.+..+++.+|+|.+............         ...|+.++..+. ||||+++++.+   
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~---------~~~e~~~~~~l~-~~~i~~~~~~~---   67 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREE---------NIREIKILRRLR-HPNIVQILDVF---   67 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHH---------HHHHHHHHHHHT-BTTBCHEEEEE---
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccch---------hhhhhhcccccc-ccccccccccc---
Confidence            78999999999999999999999999999999864322222111         234888999997 99999999999   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ......+++||++++++|.+++.  ..  ..+++..++.++.|+++|
T Consensus        68 ---~~~~~~~~v~~~~~~~~L~~~l~--~~--~~~~~~~~~~~~~qi~~~  110 (260)
T PF00069_consen   68 ---QDDNYLYIVMEYCPGGSLQDYLQ--KN--KPLSEEEILKIAYQILEA  110 (260)
T ss_dssp             ---EESSEEEEEEEEETTEBHHHHHH--HH--SSBBHHHHHHHHHHHHHH
T ss_pred             ---ccccccccccccccccccccccc--cc--cccccccccccccccccc
Confidence               66888999999999999999996  12  258999999999999876

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.69  E-value=9.4e-16  Score=106.70  Aligned_cols=113  Identities=20%  Similarity=0.395  Sum_probs=92.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+...........   .     .+.+|+.+++.+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~---~-----~~~~e~~~l~~l~-h~~i~~~~~~~-   70 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQV---E-----HVLNEKRILQSIR-HPFLVNLYGSF-   70 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHH---H-----HHHHHHHHHHhCC-CCCccceeeEE-
Confidence            479999999999999999999988899999999874321111111   1     1557999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||+++++|.++++..    ..+++..+..++.|+++|
T Consensus        71 -----~~~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~  113 (290)
T cd05580          71 -----QDDSNLYLVMEYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLA  113 (290)
T ss_pred             -----EcCCeEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                 6778899999999999999998532    358999999999999876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.69  E-value=1.7e-15  Score=103.46  Aligned_cols=113  Identities=30%  Similarity=0.491  Sum_probs=92.2

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.+|++....+++.+++|.+...........         .+.+|+.+++.+. |||++++.+.+  
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~---------~~~~e~~~l~~l~-~~~i~~~~~~~--   68 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKERE---------ESRKEVAVLSNMK-HPNIVQYQESF--   68 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHH---------HHHHHHHHHHhCC-CCCeeeeEeee--
Confidence            58899999999999999999988899999999874322221111         1457899999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...++.++++||+++++|.+++...  ....+++..++.++.|++.|
T Consensus        69 ----~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~  113 (256)
T cd08218          69 ----EENGNLYIVMDYCEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLA  113 (256)
T ss_pred             ----cCCCeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHH
Confidence                7788999999999999999988532  22348999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.68  E-value=6.5e-16  Score=109.46  Aligned_cols=108  Identities=23%  Similarity=0.342  Sum_probs=85.8

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|++.+...........        +..|..++..+..||||+++++++      .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~E~~~l~~~~~hp~iv~~~~~~------~   66 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDW--------VQTEKHVFEQASNHPFLVGLHSCF------Q   66 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHH--------HHHHHHHHHhcCCCCcCCceeeEE------E
Confidence            36899999999999999999999999997542221111111        446778777775599999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        67 ~~~~~~lv~E~~~~~~L~~~~~~---~-~~l~~~~~~~i~~qi~~~  108 (329)
T cd05618          67 TESRLFFVIEYVNGGDLMFHMQR---Q-RKLPEEHARFYSAEISLA  108 (329)
T ss_pred             eCCEEEEEEeCCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888742   2 259999999999999876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.68  E-value=4.1e-16  Score=109.90  Aligned_cols=108  Identities=22%  Similarity=0.304  Sum_probs=83.1

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|.++............        ...|..++.....||||+++++.+      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~e~~~l~~~~~hp~i~~~~~~~------~   66 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVEC--------TMVERRVLALAWEHPFLTHLFCTF------Q   66 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHH--------HHHHHHHHHhccCCCCccceeeEE------E
Confidence            36899999999999998899999999987532111111111        224555665554499999999998      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||++||+|.++++.   . ..+++..+..++.|++.|
T Consensus        67 ~~~~~~lv~e~~~gg~L~~~~~~---~-~~~~~~~~~~~~~qi~~a  108 (316)
T cd05592          67 TKEHLFFVMEYLNGGDLMFHIQS---S-GRFDEARARFYAAEIICG  108 (316)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988853   2 258999999999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG2345|consensus

Probab=99.68  E-value=1.4e-16  Score=105.61  Aligned_cols=127  Identities=24%  Similarity=0.366  Sum_probs=104.7

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      -+.+.+..++|.+.+.||+|+|+.|++++...++..||+|.+.-..  .+....         ..+|+...++++ ||||
T Consensus        13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~---------~~rEid~~rkf~-s~~v   80 (302)
T KOG2345|consen   13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEE---------ALREIDNHRKFN-SPNV   80 (302)
T ss_pred             CCcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHH---------HHHHHHHHHhhC-Ccch
Confidence            3556788899999999999999999999998999999999886432  122211         457999999999 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++.-+.... ......|++++|...|+|.+.++..+..+..+++.+++.++.+||++
T Consensus        81 l~l~dh~l~~~~-D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~g  139 (302)
T KOG2345|consen   81 LRLVDHQLREEK-DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRG  139 (302)
T ss_pred             HHHHHHHHHhhc-cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Confidence            999887654322 24456999999999999999999888777789999999999999976

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.2e-15  Score=103.59  Aligned_cols=124  Identities=53%  Similarity=0.914  Sum_probs=97.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.++|++.+.||+|++|.||++.+..++..+++|.+........            .+.+|+.+++.+..|+|+++++
T Consensus         2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~e~~~l~~~~~h~~i~~~~   69 (275)
T cd06608           2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEE------------EIKEEYNILRKYSNHPNIATFY   69 (275)
T ss_pred             CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHH------------HHHHHHHHHHHhcCCCChheEE
Confidence            3567899999999999999999999988888999998875432111            1457888888885599999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+...........++++|||+++++|.++++.....+..+++..++.++.|+++|
T Consensus        70 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~a  125 (275)
T cd06608          70 GAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRG  125 (275)
T ss_pred             EEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            99854321112456999999999999999997655334569999999999999876

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.68  E-value=1.2e-15  Score=118.51  Aligned_cols=117  Identities=22%  Similarity=0.370  Sum_probs=93.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.++..+. ||||+++++.+ 
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~r--------flrEi~ILs~L~-HPNIVkl~~v~-   71 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKR--------FLREAKIAADLI-HPGIVPVYSIC-   71 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHH--------HHHHHHHHHhCC-CcCcCeEEEEE-
Confidence            57999999999999999999998899999999987533222222111        557999999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-------CCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..|++|||++||+|.+++......       ...++...++.++.||++|
T Consensus        72 -----~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~A  125 (932)
T PRK13184         72 -----SDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT  125 (932)
T ss_pred             -----eeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHH
Confidence                 6778899999999999999998643221       1235667788899998876

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.68  E-value=6.7e-16  Score=109.31  Aligned_cols=108  Identities=19%  Similarity=0.306  Sum_probs=86.9

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|++.+..........   .     +..|..++..+..||+|+++++++      .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---~-----~~~e~~~~~~~~~~~~i~~~~~~~------~   66 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDID---W-----VQTEKHVFEQASSNPFLVGLHSCF------Q   66 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHH---H-----HHHHHHHHHhhcCCCCEeeEEEEE------E
Confidence            3689999999999999899999999999753222111111   1     457888888886699999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+||||+++|+|.+++..   . ..+++..++.++.|++.|
T Consensus        67 ~~~~~~lv~e~~~~~~L~~~~~~---~-~~l~~~~~~~~~~qi~~a  108 (327)
T cd05617          67 TTSRLFLVIEYVNGGDLMFHMQR---Q-RKLPEEHARFYAAEICIA  108 (327)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78889999999999999888842   2 259999999999999876

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.68  E-value=1.1e-15  Score=105.15  Aligned_cols=113  Identities=22%  Similarity=0.331  Sum_probs=89.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+|++.+.||+|+||.||++.+..++.   .+++|.+..... .+. ..        .+.+|+.++..+. ||||++++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~-~~--------~~~~e~~~l~~l~-h~~i~~~~   71 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQ-RR--------DFLSEASIMGQFD-HPNIIHLE   71 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHH-HH--------HHHHHHHHHHhCC-CCCcceEE
Confidence            4589999999999999999998764433   688888764322 111 11        1557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..|++|||+++++|.+++..   ....+++..+..++.|++.|
T Consensus        72 ~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~  118 (267)
T cd05066          72 GVV------TKSKPVMIVTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASG  118 (267)
T ss_pred             EEE------ecCCccEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            998      677889999999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1094|consensus

Probab=99.68  E-value=5.6e-17  Score=118.58  Aligned_cols=117  Identities=24%  Similarity=0.376  Sum_probs=93.3

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...+++...+.+.||+|.||.|.+|+. ..+.++|+|.++......  ..++        |.+|+.+|.++. ||||+++
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~--~r~~--------F~kEIkiLsqLk-hPNIveL  600 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKN--ARND--------FLKEIKILSRLK-HPNIVEL  600 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchh--HHHH--------HHHHHHHHhccC-CCCeeEE
Confidence            356788899999999999999999985 446899999987533222  1121        668999999997 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ..++.+++++||++.|+|.+++..+...  .+.......++.||+++
T Consensus       601 vGVC------~~DePicmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasg  649 (807)
T KOG1094|consen  601 LGVC------VQDDPLCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASG  649 (807)
T ss_pred             Eeee------ecCCchHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHH
Confidence            9999      6888999999999999999999653222  24556667788998764

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.68  E-value=4.3e-16  Score=109.96  Aligned_cols=108  Identities=21%  Similarity=0.315  Sum_probs=84.9

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|++.+...........        +..|..++..+..||+|+++++++      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~il~~~~~hp~i~~~~~~~------~   66 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDC--------TMTEKRILALAAKHPFLTALHCCF------Q   66 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHH--------HHHHHHHHHhccCCCCccceeeEE------E
Confidence            36899999999999998889999999987532111111111        346777777665599999999999      7


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+||||+++|+|.+++..   . ..+++..++.++.|+++|
T Consensus        67 ~~~~~~lv~E~~~~~~L~~~l~~---~-~~~~~~~~~~~~~qi~~a  108 (321)
T cd05591          67 TKDRLFFVMEYVNGGDLMFQIQR---S-RKFDEPRSRFYAAEVTLA  108 (321)
T ss_pred             cCCeEEEEEeCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988843   2 258999999999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=1.2e-15  Score=116.94  Aligned_cols=114  Identities=18%  Similarity=0.297  Sum_probs=93.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+++.||+|+||.||++.+..+++.||+|++.............        +..|+.++..+. ||||++++..+
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~--------~~~E~~~l~~l~-hp~Iv~~~~~~   73 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQ--------VQAERDALALSK-SPFIVHLYYSL   73 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHH--------HHHHHHHHHhcC-CCCcCeEEEEE
Confidence            468999999999999999999998889999999997543222221111        457888888888 99999999888


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+++|+||||+.|++|.+++...    ..+++..++.++.||+.|
T Consensus        74 ------~~~~~~~lVmEy~~g~~L~~li~~~----~~l~~~~~~~i~~qil~a  116 (669)
T cd05610          74 ------QSANNVYLVMEYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALA  116 (669)
T ss_pred             ------EECCEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                  6778999999999999999998532    258999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.68  E-value=2.1e-15  Score=102.84  Aligned_cols=113  Identities=28%  Similarity=0.404  Sum_probs=93.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++....++..+++|.+............         +.+|+.+++.++ |||++++++.+  
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~~~-~~~i~~~~~~~--   68 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLA---------AQNECQVLKLLS-HPNIIEYYENF--   68 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHH---------HHHHHHHHhhCC-CCchhheeeeE--
Confidence            588999999999999999999888999999998754322222111         557999999998 99999999988  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++....  +..+++..+..++.|+++|
T Consensus        69 ----~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~  113 (256)
T cd08220          69 ----LEDKALMIVMEYAPGGTLAEYIQKRC--NSLLDEDTILHFFVQILLA  113 (256)
T ss_pred             ----ecCCEEEEEEecCCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHH
Confidence                67788999999999999999996422  3358999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.68  E-value=4.2e-16  Score=107.00  Aligned_cols=117  Identities=25%  Similarity=0.419  Sum_probs=95.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++....++..+++|.+............        .+.+|+.+++.+. |||++++++.+ 
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~--------~~~~e~~~l~~~~-h~~i~~~~~~~-   71 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARA--------DCIKEIDLLKQLN-HPNVIKYYASF-   71 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHH--------HHHHHHHHHHHcc-CCchhhhhhee-
Confidence            4688899999999999999998888999999988643222111111        1557999999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++..+++|||+++++|.+++......+..+++..++.++.|+++|
T Consensus        72 -----~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  118 (267)
T cd08229          72 -----IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSA  118 (267)
T ss_pred             -----EeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence                 56788999999999999999997544444568999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.68  E-value=5.9e-16  Score=109.35  Aligned_cols=107  Identities=23%  Similarity=0.403  Sum_probs=82.7

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHH-HHhccCCCCCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL-VLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      +.||+|+||.||++.+..+++.+|+|++.............        +..|.. +++.+. ||||+++++.+      
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~e~~~~~~~l~-hp~iv~~~~~~------   65 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKH--------IMAERNVLLKNVK-HPFLVGLHYSF------   65 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHH--------HHHHHHHHHhhCC-CCCCCCeeEEE------
Confidence            36899999999999999999999999987532111111111        223433 456677 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+..|++|||+++|+|.++++.    +..+++..++.++.||++|
T Consensus        66 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~  108 (323)
T cd05575          66 QTADKLYFVLDYVNGGELFFHLQR----ERSFPEPRARFYAAEIASA  108 (323)
T ss_pred             EeCCEEEEEEcCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            678899999999999999998853    2358999999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=2.7e-16  Score=108.76  Aligned_cols=114  Identities=32%  Similarity=0.613  Sum_probs=94.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ++.++|++.+.||+|+||.||++.+..++..+++|.+....  ......         +..|+.+++.+. |||++++++
T Consensus         2 ~~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~   69 (280)
T cd06611           2 NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELED---------FMVEIDILSECK-HPNIVGLYE   69 (280)
T ss_pred             CchhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHH---------HHHHHHHHHhCC-CCceeEEEE
Confidence            46678999999999999999999988888999999986432  111111         457899999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ..+...|++|||+++++|.+++...   +..+++..++.++.|++.|
T Consensus        70 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~  115 (280)
T cd06611          70 AY------FYENKLWILIEFCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEA  115 (280)
T ss_pred             EE------ecCCeEEEEeeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence            99      6788899999999999999988532   2359999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0690|consensus

Probab=99.68  E-value=7.5e-18  Score=115.96  Aligned_cols=118  Identities=26%  Similarity=0.364  Sum_probs=98.1

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|..++.||+|.||+|.+|+.+.+++.||+|++++.-.-.+.   +...     ...|-.+++... ||.+..+-
T Consensus       164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakd---EVAH-----TlTE~RVL~~~~-HPFLt~LK  234 (516)
T KOG0690|consen  164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKD---EVAH-----TLTENRVLQNCR-HPFLTSLK  234 (516)
T ss_pred             eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehH---Hhhh-----hhhHHHHHHhcc-CcHHHHhh
Confidence            34677899999999999999999999999999999998864322221   1111     457888899888 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ..|      ++.+++|+||||..||.|+-.+++.    ..++++.+++|...|.+|+
T Consensus       235 YsF------Qt~drlCFVMeyanGGeLf~HLsre----r~FsE~RtRFYGaEIvsAL  281 (516)
T KOG0690|consen  235 YSF------QTQDRLCFVMEYANGGELFFHLSRE----RVFSEDRTRFYGAEIVSAL  281 (516)
T ss_pred             hhh------ccCceEEEEEEEccCceEeeehhhh----hcccchhhhhhhHHHHHHh
Confidence            999      8999999999999999999998542    2499999999999998874

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.68  E-value=2.3e-15  Score=102.72  Aligned_cols=113  Identities=24%  Similarity=0.429  Sum_probs=92.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.|+.+....++..+++|.+............         +.+|+.+++.++ |+|++++++.+  
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~---------~~~e~~~l~~~~-h~~i~~~~~~~--   68 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRD---------ALNEIVILSLLQ-HPNIIAYYNHF--   68 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHH---------HHHHHHHHHhCC-CCCeeEEEeEE--
Confidence            589999999999999999999889999999988754322222111         457999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.++++|||+++++|.+++....  +..+++..+..++.|++++
T Consensus        69 ----~~~~~~~~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~  113 (256)
T cd08221          69 ----MDDNTLLIEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSA  113 (256)
T ss_pred             ----ecCCeEEEEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHH
Confidence                67788999999999999999985322  3358999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.68  E-value=6.6e-16  Score=109.19  Aligned_cols=107  Identities=22%  Similarity=0.377  Sum_probs=82.7

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHH-HHhccCCCCCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL-VLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      +.||+|+||.||++.+..+++.+|+|++.+...........        +..|.. +++.+. ||||+++++.+      
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~~l~~~~-hp~iv~~~~~~------   65 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKH--------IMAERNVLLKNVK-HPFLVGLHYSF------   65 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHH--------HHHHHHHHHHhCC-CCCCccEEEEE------
Confidence            36899999999999998999999999987532111111111        223444 456676 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+..|++|||+++|+|..++..    ...+++..++.++.||+.|
T Consensus        66 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~a  108 (325)
T cd05604          66 QTTEKLYFVLDFVNGGELFFHLQR----ERSFPEPRARFYAAEIASA  108 (325)
T ss_pred             ecCCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            778899999999999999888742    2359999999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.68  E-value=6.7e-16  Score=108.98  Aligned_cols=107  Identities=22%  Similarity=0.403  Sum_probs=82.7

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHH-HHHhccCCCCCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY-LVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      +.||+|+||.||++.+..++..+|+|.+.+...........        +..|. .+++.+. ||||+++++.+      
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~~l~~~~-h~~iv~~~~~~------   65 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNH--------IMAERNVLLKNLK-HPFLVGLHYSF------   65 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHH--------HHHHHHHHHHhCC-CCCccceeeEE------
Confidence            36899999999999998899999999987432111111111        22343 4567777 99999999998      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+..|++|||+++|+|.+.+..    ...+++..++.++.||++|
T Consensus        66 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~  108 (321)
T cd05603          66 QTAEKLYFVLDYVNGGELFFHLQR----ERCFLEPRARFYAAEVASA  108 (321)
T ss_pred             EcCCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            678899999999999999888742    2358999999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.68  E-value=1.2e-15  Score=105.71  Aligned_cols=113  Identities=28%  Similarity=0.467  Sum_probs=91.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|++|.||++.+..++..+++|.+........ ....        +.+|+.++..+. |||++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~--   68 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-VPST--------AIREISLLKELQ-HPNIVCLQDVL--   68 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCC-chHH--------HHHHHHHHHhcC-CCCEeeeEEEE--
Confidence            58899999999999999999988899999998864322111 1111        346889999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ..++.+|++|||++ ++|.+++..... +..+++..++.++.|+++|
T Consensus        69 ----~~~~~~~~v~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~  113 (285)
T cd07861          69 ----MQESRLYLIFEFLS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQG  113 (285)
T ss_pred             ----eeCCeEEEEEecCC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHH
Confidence                67888999999996 688888864333 2368999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.68  E-value=6.1e-16  Score=109.10  Aligned_cols=108  Identities=23%  Similarity=0.324  Sum_probs=85.3

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|++.+..........   .     +..|..++..+..||||+++++++      .
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---~-----~~~e~~il~~~~~h~~i~~~~~~~------~   66 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVE---C-----TMTEKRVLALAGKHPFLTQLHSCF------Q   66 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHH---H-----HHHHHHHHHhccCCCCccceeeEE------E
Confidence            3689999999999999888999999999753211111111   1     346777787775599999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||++||+|.+++..   . ..+++..+..++.|++.|
T Consensus        67 ~~~~~~lv~e~~~~~~L~~~~~~---~-~~l~~~~~~~~~~qi~~~  108 (318)
T cd05570          67 TKDRLFFVMEYVNGGDLMFHIQR---S-GRFDEPRARFYAAEIVLG  108 (318)
T ss_pred             cCCEEEEEEcCCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78899999999999999888843   2 259999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0667|consensus

Probab=99.68  E-value=3.5e-16  Score=115.09  Aligned_cols=111  Identities=27%  Similarity=0.381  Sum_probs=91.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-----CCcceee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-----PNIPSFY   95 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~l~   95 (152)
                      +|.+.+.||+|.||.|.+|.+..+++.||+|+++........            ...|+.++..++.|     -|+|+++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q------------~~~Ei~iL~~ln~~d~~~~~n~Vrm~  254 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQ------------AQIEIRILELLNKHDPDDKYNIVRML  254 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHH------------HHHHHHHHHHHhccCCCCCeeEEEee
Confidence            689999999999999999999999999999999854322221            23578888877633     4899999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++|      ...+++|||+|.+ +.+|.++++..+-.  .|+...++.++.||+.|+
T Consensus       255 d~F------~fr~HlciVfELL-~~NLYellK~n~f~--Glsl~~ir~~~~Qil~~L  302 (586)
T KOG0667|consen  255 DYF------YFRNHLCIVFELL-STNLYELLKNNKFR--GLSLPLVRKFAQQILTAL  302 (586)
T ss_pred             ecc------ccccceeeeehhh-hhhHHHHHHhcCCC--CCCHHHHHHHHHHHHHHH
Confidence            999      7899999999999 67999999754443  499999999999999863

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.68  E-value=2.5e-15  Score=105.45  Aligned_cols=113  Identities=24%  Similarity=0.309  Sum_probs=90.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.++......... .         +.+|+.+++.++ ||||+++++.
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~---------~~~E~~~l~~l~-h~~iv~~~~~   72 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPC-T---------AIREVSLLKDLK-HANIVTLHDI   72 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcch-h---------HHHHHHHHHhCC-CCCcceEEEE
Confidence            3468999999999999999999998889999999987533211110 1         346889999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++..+++|||++ ++|.+++..   .+..+++..++.++.|++.|
T Consensus        73 ~------~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~a  116 (309)
T cd07872          73 V------HTDKSLTLVFEYLD-KDLKQYMDD---CGNIMSMHNVKIFLYQILRG  116 (309)
T ss_pred             E------eeCCeEEEEEeCCC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            9      67888999999996 588887742   23358999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0986|consensus

Probab=99.67  E-value=1e-17  Score=119.14  Aligned_cols=131  Identities=19%  Similarity=0.282  Sum_probs=109.1

Q ss_pred             cccccccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHH
Q psy2812           3 YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL   82 (152)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   82 (152)
                      +..+.++.++.......+.|..-.+||+|+||.|+-|+.+.+|++||+|.+.+.+...+....  .      ..+|..++
T Consensus       168 f~rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~--m------aLnEk~iL  239 (591)
T KOG0986|consen  168 FTRFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGET--M------ALNEKQIL  239 (591)
T ss_pred             HHHHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhH--H------hhHHHHHH
Confidence            345677778888888888999999999999999999999999999999988754332222111  1      45799999


Q ss_pred             hccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          83 KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        83 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ..++ .++||.+-..|      ++.+.+|+|+..|.||||...|..+...  .|++..+++|+++|+-
T Consensus       240 ~kV~-s~FiVslaYAf------eTkd~LClVLtlMNGGDLkfHiyn~g~~--gF~e~ra~FYAAEi~c  298 (591)
T KOG0986|consen  240 EKVS-SPFIVSLAYAF------ETKDALCLVLTLMNGGDLKFHIYNHGNP--GFDEQRARFYAAEIIC  298 (591)
T ss_pred             HHhc-cCcEEEEeeee------cCCCceEEEEEeecCCceeEEeeccCCC--CCchHHHHHHHHHHHh
Confidence            9998 99999999999      8999999999999999999999765553  4999999999999863

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.67  E-value=2.3e-15  Score=105.28  Aligned_cols=113  Identities=24%  Similarity=0.320  Sum_probs=91.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.+.......... .         +.+|+.+++.+. ||||++++++
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~---------~~~E~~~l~~l~-h~nI~~~~~~   72 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPC-T---------AIREVSLLKDLK-HANIVTLHDI   72 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchh-H---------HHHHHHHHHhcC-CCCcceEEEE
Confidence            3468999999999999999999998889999999987433221111 0         346889999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++..+++|||++ ++|.+++..   .+..+++..++.++.|+++|
T Consensus        73 ~------~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~a  116 (301)
T cd07873          73 I------HTEKSLTLVFEYLD-KDLKQYLDD---CGNSINMHNVKLFLFQLLRG  116 (301)
T ss_pred             E------ecCCeEEEEEeccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            9      77889999999996 688888743   23358999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.67  E-value=8.7e-16  Score=106.29  Aligned_cols=107  Identities=20%  Similarity=0.227  Sum_probs=84.8

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||++..+.+++.+|+|.+............        .+..|+.++..++ ||||+++++.+      +..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~--------~~~~E~~il~~l~-hp~i~~~~~~~------~~~   65 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEK--------MALLEKEILEKVN-SPFIVNLAYAF------ESK   65 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhH--------HHHHHHHHHHhcC-CCcEEEEEEEE------ecC
Confidence            69999999999999889999999998643221111111        1345889999998 99999999999      778


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.|++|||++||+|.+++....  ...+++..+..++.|++.|
T Consensus        66 ~~~~lv~e~~~g~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~a  107 (277)
T cd05607          66 THLCLVMSLMNGGDLKYHIYNVG--ERGLEMERVIHYSAQITCG  107 (277)
T ss_pred             CeEEEEEecCCCCCHHHHHHhcc--ccCCCHHHHHHHHHHHHHH
Confidence            89999999999999988885322  2348999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.67  E-value=1.8e-15  Score=103.61  Aligned_cols=114  Identities=21%  Similarity=0.374  Sum_probs=91.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||.||++.. .++..+++|.+.......+            .+.+|+.+++.+. |+|+++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~------------~~~~e~~~l~~l~-h~~i~~~~   67 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQ------------AFLEEANLMKTLQ-HDKLVRLY   67 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHH------------HHHHHHHHHHhCC-CCCeeeEE
Confidence            35667899999999999999999986 4566799998764322111            1457899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..+++|||+++|+|.++++..  ....+++..++.++.|+++|
T Consensus        68 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~  115 (261)
T cd05072          68 AVV------TKEEPIYIITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEG  115 (261)
T ss_pred             EEE------cCCCCcEEEEecCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHH
Confidence            998      6778899999999999999998643  23358999999999999876

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.67  E-value=9.4e-16  Score=108.11  Aligned_cols=108  Identities=22%  Similarity=0.322  Sum_probs=83.8

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|.++............        ...|..++.....||||+++++.+      .
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~e~~~l~~~~~hp~iv~~~~~~------~   66 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVEC--------TMVEKRVLSLAWEHPFLTHLYCTF------Q   66 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHH--------HHHHHHHHHhccCCCcCcceEEEE------E
Confidence            36899999999999998899999999987532111111110        335666776654499999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.++++.   . ..+++..+..++.|++.|
T Consensus        67 ~~~~~~lv~ey~~~g~L~~~l~~---~-~~~~~~~~~~~~~qi~~a  108 (316)
T cd05619          67 TKENLFFVMEYLNGGDLMFHIQS---C-HKFDLPRATFYAAEIICG  108 (316)
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            78889999999999999998853   1 248999999999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.67  E-value=6.1e-16  Score=110.18  Aligned_cols=99  Identities=23%  Similarity=0.433  Sum_probs=76.4

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +..+.++|++.+.||+|+||.||+|.+.     .+++.+|+|.++..... .....         +.+|+.++..+..||
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l~~h~   71 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRA---------LMSELKILIHIGHHL   71 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-HHHHH---------HHHHHHHHHhccCCc
Confidence            3456779999999999999999999743     35678999998643221 11111         457999999996589


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      ||+++++.+.     .....++++|||+++|+|.++++.
T Consensus        72 niv~~~~~~~-----~~~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          72 NVVNLLGACT-----KPGGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             cHhhhcceee-----cCCCceEEEEeccCCCcHHHHHHh
Confidence            9999998873     344578999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.67  E-value=1.2e-15  Score=104.30  Aligned_cols=112  Identities=23%  Similarity=0.443  Sum_probs=92.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||.|+||.||++.+..++..+++|.+.............        +.+|+.+++.++ |||++++++.+  
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~--   69 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRN--------VLNERRILQELN-HPFLVNLWYSF--   69 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHH--------HHHHHHHHHhCC-CCChHHHHHhh--
Confidence            5899999999999999999998889999999987533222111111        457899999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......++++||++|++|.+++...    ..+++..+..++.|+++|
T Consensus        70 ----~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~  112 (258)
T cd05578          70 ----QDEENMYLVVDLLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLA  112 (258)
T ss_pred             ----cCCCeEEEEEeCCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHH
Confidence                7788999999999999999998532    358999999999999876

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG4250|consensus

Probab=99.67  E-value=8.5e-17  Score=119.38  Aligned_cols=120  Identities=26%  Similarity=0.377  Sum_probs=93.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ..|...+.||+|+||.||+++++.+|+.+|+|.++....... .    ..     ..+|+.++++++ |||||+++++--
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~-~----e~-----~~~EieilkKLn-h~NIVk~f~iee   81 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRP-R----ER-----WCREIEILKKLN-HPNIVKLFDIEE   81 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccch-H----HH-----HHHHHHHHHHcC-chhhhhhcccCC
Confidence            456778899999999999999999999999998875331111 1    11     347999999999 999999998762


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +...........++||||.||||...++...+.. .|++..++.++.+++.|
T Consensus        82 ~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~-GLpE~e~l~lL~d~~~a  132 (732)
T KOG4250|consen   82 TKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAY-GLPESEFLDLLSDLVSA  132 (732)
T ss_pred             ccccCcccccceEEEeecCCCcHHHHhcCccccc-CCCHHHHHHHHHHHHHH
Confidence            2110012446789999999999999998755544 59999999999888765

>KOG0585|consensus

Probab=99.67  E-value=2.2e-16  Score=112.95  Aligned_cols=127  Identities=30%  Similarity=0.405  Sum_probs=94.3

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhH---HHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI---EEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .....++|++.+.||+|+||+|.++.+..+++.||+|++.+........   ......+..-...+|+.+|+++. ||||
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nV  170 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNV  170 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCe
Confidence            3456678999999999999999999999999999999997643222111   00111112223668999999999 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      |+|+++..+    ...+.+|||+|||..|.+...    ...+.-+++.+++.|+.++..
T Consensus       171 V~LiEvLDD----P~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~  221 (576)
T KOG0585|consen  171 VKLIEVLDD----PESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVL  221 (576)
T ss_pred             eEEEEeecC----cccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHH
Confidence            999999843    345779999999998875332    233322999999999998753

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.67  E-value=3.3e-15  Score=103.86  Aligned_cols=112  Identities=25%  Similarity=0.350  Sum_probs=91.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|++|.||++.++.+++.+++|.+.......... .         +.+|+.+++.++ ||||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-~---------~~~E~~~l~~l~-h~~i~~~~~~~   72 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPF-T---------AIREASLLKDLK-HANIVTLHDII   72 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCch-h---------HHHHHHHHhhCC-CcceeeEEEEE
Confidence            468999999999999999999998889999999987432211101 0         346999999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...++.++||||+. ++|.+++...   +..+++..++.++.|+++|
T Consensus        73 ------~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~ql~~a  115 (291)
T cd07844          73 ------HTKKTLTLVFEYLD-TDLKQYMDDC---GGGLSMHNVRLFLFQLLRG  115 (291)
T ss_pred             ------ecCCeEEEEEecCC-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHH
Confidence                  67889999999996 5898887532   2358999999999999886

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.67  E-value=8.8e-16  Score=108.22  Aligned_cols=108  Identities=22%  Similarity=0.300  Sum_probs=84.1

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..++..+|+|.++............        ...|..++.....||+++++++.+      .
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~--------~~~e~~~l~~~~~~~~i~~~~~~~------~   66 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVEC--------TMVEKRVLALAWENPFLTHLYCTF------Q   66 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHH--------HHHHHHHHHhccCCCCccCeeEEE------E
Confidence            36899999999999999999999999997532111111110        335667776654499999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+++|++|||+++|+|.+++..    +..+++..+..++.|+++|
T Consensus        67 ~~~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~  108 (316)
T cd05620          67 TKEHLFFVMEFLNGGDLMFHIQD----KGRFDLYRATFYAAEIVCG  108 (316)
T ss_pred             eCCEEEEEECCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988843    2258999999999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=3.2e-15  Score=102.38  Aligned_cols=115  Identities=30%  Similarity=0.494  Sum_probs=93.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|++|.||.+.+..++..+++|.+........ .......     +.+|+.+++.++ ||||+++++.+ 
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~-~~~~~~~-----~~~e~~~l~~l~-~~~i~~~~~~~-   73 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE-TKKEVNA-----LECEIQLLKNLQ-HERIVQYYGCL-   73 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh-hHHHHHH-----HHHHHHHHHhCC-CCCeeeeEEEE-
Confidence            478999999999999999999888899999999875432221 1111111     568999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+++++||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        74 -----~~~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~~  116 (263)
T cd06625          74 -----RDDETLSIFMEYMPGGSVKDQLKAY----GALTETVTRKYTRQILEG  116 (263)
T ss_pred             -----ccCCeEEEEEEECCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHH
Confidence                 6778999999999999999988532    258999999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.66  E-value=3.3e-15  Score=103.45  Aligned_cols=111  Identities=24%  Similarity=0.331  Sum_probs=91.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..++..+++|.+...........         .+.+|+.+++.+. |||++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~---------~~~~e~~~l~~~~-~~~i~~~~~~~--   68 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPN---------QALREIKALQACQ-HPYVVKLLDVF--   68 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhH---------HHHHHHHHHHhCC-CCCCcceeeEE--
Confidence            58899999999999999999988899999999875432221111         1457899999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......++++||+ +++|.+++...   ...+++..++.++.|+++|
T Consensus        69 ----~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~  111 (286)
T cd07832          69 ----PHGSGFVLVMEYM-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKG  111 (286)
T ss_pred             ----ecCCeeEEEeccc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence                6788899999999 99999998532   2359999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.66  E-value=2.5e-15  Score=102.69  Aligned_cols=110  Identities=24%  Similarity=0.359  Sum_probs=88.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++... .+..+|+|.+.........            +.+|+.+++.++ |||++++++.+
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~~~~~   68 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEED------------FIEEAKVMMKLS-HPKLVQLYGVC   68 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHH------------HHHHHHHHHHCC-CCCceeEEEEE
Confidence            357999999999999999999864 4557899987643222111            446889999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++|+|.++++..   ...+++..++.++.|++.|
T Consensus        69 ------~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~  112 (256)
T cd05114          69 ------TQQKPLYIVTEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEG  112 (256)
T ss_pred             ------ccCCCEEEEEEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHH
Confidence                  6778899999999999999988532   2248999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.66  E-value=3.4e-15  Score=104.65  Aligned_cols=113  Identities=24%  Similarity=0.334  Sum_probs=91.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+++|.+...........   .     .+..|+.+++.+. ||||+++++.+ 
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~---~-----~~~~e~~~l~~~~-~~~i~~~~~~~-   70 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQI---Q-----QVFVERDILTFAE-NPFVVSMFCSF-   70 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHH---H-----HHHHHHHHHHhCC-CCCeeeeEEEE-
Confidence            378999999999999999999999999999998875321111111   1     1457889999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...++++++|||++|++|.+++..   . ..+++..+..++.|+++|
T Consensus        71 -----~~~~~~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~~~~~~~i~~~  113 (305)
T cd05609          71 -----ETKRHLCMVMEYVEGGDCATLLKN---I-GALPVDMARMYFAETVLA  113 (305)
T ss_pred             -----ecCCEEEEEEecCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                 678899999999999999999843   2 258999999999998875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.66  E-value=3.1e-15  Score=109.88  Aligned_cols=118  Identities=26%  Similarity=0.376  Sum_probs=91.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|++.+.||+|+||.||++.+..+++.+|+|.+......               ..+|+.+++.+. ||||+++++
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~---------------~~~Ei~il~~l~-h~niv~l~~  126 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY---------------KNRELLIMKNLN-HINIIFLKD  126 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch---------------HHHHHHHHHhcC-CCCCcceee
Confidence            3456899999999999999999999889999999988542210               236888999998 999999988


Q ss_pred             eeeecCC--CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGG--QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.....  ......++++|||++ ++|.+++......+..+++..++.++.|++.|
T Consensus       127 ~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  182 (440)
T PTZ00036        127 YYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRA  182 (440)
T ss_pred             eEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            7643211  012345789999996 57888886555555579999999999999876

>KOG0608|consensus

Probab=99.66  E-value=1.4e-16  Score=117.75  Aligned_cols=114  Identities=22%  Similarity=0.386  Sum_probs=94.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..-|..++.||-|.||+|.++....+...||+|.+++...-.+.   .+     .++..|..||.... +++||+||..|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rn---Qv-----aHVKAERDILAEAD-n~WVVrLyySF  698 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRN---QV-----AHVKAERDILAEAD-NEWVVRLYYSF  698 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhh---hh-----hhhhhhhhhHhhcC-CcceEEEEEEe
Confidence            44688999999999999999998888888999988754321111   11     12567999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ++.+.+|+||||++|||+..+|-++.    .|+|..+++|++++..|
T Consensus       699 ------QDkdnLYFVMdYIPGGDmMSLLIrmg----IFeE~LARFYIAEltcA  741 (1034)
T KOG0608|consen  699 ------QDKDNLYFVMDYIPGGDMMSLLIRMG----IFEEDLARFYIAELTCA  741 (1034)
T ss_pred             ------ccCCceEEEEeccCCccHHHHHHHhc----cCHHHHHHHHHHHHHHH
Confidence                  88999999999999999999995443    59999999999988655

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.66  E-value=7.4e-16  Score=110.10  Aligned_cols=109  Identities=22%  Similarity=0.349  Sum_probs=88.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|+.++.||+|+||.||++.+..+++.+|+|.+.....  .....        .+.+|+.+++.+. |+||+++++.
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~--------~~~~E~~~l~~l~-h~~iv~~~~~  140 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE--DTVRR--------QICREIEILRDVN-HPNVVKCHDM  140 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc--HHHHH--------HHHHHHHHHHhCC-CCCcceeeeE
Confidence            34678899999999999999999988999999999864321  11111        1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.++++|||+++|+|.+..        ..++..+..++.||+.|
T Consensus       141 ~------~~~~~~~lv~e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~a  180 (353)
T PLN00034        141 F------DHNGEIQVLLEFMDGGSLEGTH--------IADEQFLADVARQILSG  180 (353)
T ss_pred             e------ccCCeEEEEEecCCCCcccccc--------cCCHHHHHHHHHHHHHH
Confidence            9      7788999999999999886532        36778888899999876

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.66  E-value=1.7e-15  Score=103.25  Aligned_cols=106  Identities=25%  Similarity=0.456  Sum_probs=85.9

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|.+.....  ......        +.+|+.+++.+. ||||+++++.+      .
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~--~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~------~   63 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP--PDLKAK--------FLQEARILKQYS-HPNIVRLIGVC------T   63 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC--HHHHHH--------HHHHHHHHHhCC-CCCcceEEEEE------c
Confidence            368999999999999988999999998764321  111111        457899999998 99999999998      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .....+++|||+++++|.++++.   .+..+++..++.++.|+++|
T Consensus        64 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~qi~~~  106 (252)
T cd05084          64 QKQPIYIVMELVQGGDFLTFLRT---EGPRLKVKELIQMVENAAAG  106 (252)
T ss_pred             CCCCeEEEEeeccCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            77889999999999999999853   23358999999999999876

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.66  E-value=5.2e-15  Score=101.24  Aligned_cols=113  Identities=44%  Similarity=0.777  Sum_probs=93.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +.++|++.+.||+|+||.||++.+..++..+++|.+......  .. ..        +.+|+.+++.++ |||++++++.
T Consensus         1 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~-~~--------~~~e~~~l~~~~-h~~i~~~~~~   68 (262)
T cd06613           1 PQEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DF-EI--------IQQEISMLKECR-HPNIVAYFGS   68 (262)
T ss_pred             CccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hH-HH--------HHHHHHHHHhCC-CCChhceEEE
Confidence            457899999999999999999999888889999998753221  11 11        457899999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      .....+|++|||+++++|.+++..   .+..+++..++.++.|++.|
T Consensus        69 ~------~~~~~~~l~~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~  113 (262)
T cd06613          69 Y------LRRDKLWIVMEYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKG  113 (262)
T ss_pred             E------EeCCEEEEEEeCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHH
Confidence            8      667889999999999999998853   22359999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0033|consensus

Probab=99.66  E-value=3.8e-19  Score=117.94  Aligned_cols=115  Identities=22%  Similarity=0.326  Sum_probs=97.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..+.|++.+.||+|.|+.|+++.++.+|+.+|+|++.........++.         +.+|+.+.+.+. ||||+++.+.
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~---------l~rEarIC~~Lq-HP~IvrL~~t   78 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---------LEREARICRKLQ-HPNIVRLHDS   78 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHH---------HHHHHHHHHhcC-CCcEeehhhh
Confidence            356789999999999999999999999999999988754433333332         568999999999 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +      +.....|||+|+++||+|+.-+...    ..++|..+-++++||++|.
T Consensus        79 i------~~~~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal  123 (355)
T KOG0033|consen   79 I------QEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEAL  123 (355)
T ss_pred             h------cccceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence            8      7899999999999999998877421    3589999999999999873

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.66  E-value=3.3e-15  Score=102.66  Aligned_cols=113  Identities=19%  Similarity=0.307  Sum_probs=89.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++|++.+.||+|+||.||++.....   ...+++|.+......  .....        +..|+.++..++ |||+++++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~--~~~~~--------~~~e~~~l~~l~-h~~i~~~~   71 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSD--KQRLD--------FLTEASIMGQFD-HPNIIRLE   71 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCCh--HHHHH--------HHHHHHHHHhCC-CCCcceEe
Confidence            46799999999999999999987543   346899987643221  11111        457889999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..+++|||+++++|.+++...   ...+++..+..++.|++.|
T Consensus        72 ~~~------~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~  118 (266)
T cd05033          72 GVV------TKSRPVMIITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASG  118 (266)
T ss_pred             EEE------ecCCceEEEEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHH
Confidence            998      6778899999999999999998532   2358999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.66  E-value=2.2e-15  Score=104.36  Aligned_cols=128  Identities=45%  Similarity=0.781  Sum_probs=98.3

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      .++.+...+.+.|++.+.||+|+||.||++.+..++..+++|.+.........            +..|+.++..+..|+
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~------------~~~e~~~l~~~~~h~   73 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEE------------IKLEINMLKKYSHHR   73 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHH------------HHHHHHHHHHhcCCC
Confidence            34555566778999999999999999999999889999999988643211111            346777788775599


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |++++++.+...........+|++|||+++|+|.++++...  +..+++..++.++.|+++|
T Consensus        74 ~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~a  133 (282)
T cd06636          74 NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRG  133 (282)
T ss_pred             cEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHH
Confidence            99999998854322124578999999999999999986433  2358899999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.66  E-value=1.4e-15  Score=107.62  Aligned_cols=107  Identities=21%  Similarity=0.384  Sum_probs=82.0

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHH-HHHhccCCCCCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY-LVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      +.||+|+||.||++.+..++..+|+|++.............        +..|. .+++.+. ||||+++++.+      
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~~l~~~~-h~~Iv~~~~~~------   65 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKH--------IMSERNVLLKNVK-HPFLVGLHFSF------   65 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHH--------HHHHHHHHHHhCC-CCCCCceeEEE------
Confidence            36899999999999998899999999987432111111111        22333 3456676 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+.+|++|||+++|+|.+++..    ...+++..++.++.|+++|
T Consensus        66 ~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~  108 (325)
T cd05602          66 QTADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASA  108 (325)
T ss_pred             EcCCeEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            678899999999999999998853    2258999999999999876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.66  E-value=1.7e-15  Score=109.72  Aligned_cols=105  Identities=17%  Similarity=0.235  Sum_probs=88.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ....|++++.||+|+||.||++.+..+++.+|+|.....                 .+.+|+.+++.++ ||||+++++.
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~-----------------~~~~E~~il~~l~-HpnIv~~~~~  151 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRG-----------------GTATEAHILRAIN-HPSIIQLKGT  151 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhh-----------------hhHHHHHHHHhCC-CCCCCCEeEE
Confidence            346799999999999999999999999999999964321                 0347999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......++++|++ +++|..++..   . ..+++..++.++.|++.|
T Consensus       152 ~------~~~~~~~lv~e~~-~~~L~~~l~~---~-~~l~~~~~~~i~~qi~~a  194 (391)
T PHA03212        152 F------TYNKFTCLILPRY-KTDLYCYLAA---K-RNIAICDILAIERSVLRA  194 (391)
T ss_pred             E------EECCeeEEEEecC-CCCHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            9      6778899999999 5788888742   2 258999999999999876

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.66  E-value=3.8e-15  Score=102.47  Aligned_cols=113  Identities=22%  Similarity=0.349  Sum_probs=90.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+|++.+.||+|+||.||++....++.   .+++|.+.....  ......        +..|+.+++.+. |||+++++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~--------~~~e~~~l~~l~-h~ni~~~~   71 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT--EKQRRD--------FLSEASIMGQFD-HPNIIHLE   71 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC--HHHHHH--------HHHHHHHHHhCC-CcCcceEE
Confidence            3578999999999999999999876554   589998764321  111111        557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ......+++|||+++|+|.++++..   ...+++..++.++.|++.|
T Consensus        72 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~a  118 (269)
T cd05065          72 GVV------TKSRPVMIITEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAG  118 (269)
T ss_pred             EEE------CCCCceEEEEecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHH
Confidence            998      6778899999999999999988532   2358999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.66  E-value=2.6e-15  Score=102.45  Aligned_cols=113  Identities=32%  Similarity=0.601  Sum_probs=92.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++....++..+++|.+............         +.+|+.+++.++ |+|++++++.+  
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~E~~~l~~~~-h~~i~~~~~~~--   68 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEA---------SKKEVILLAKMK-HPNIVTFFASF--   68 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHH---------HHHHHHHHHhCC-CCChhhhhhee--
Confidence            588999999999999999999888999999998753221111111         457999999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..++++||+++++|.+++...  .+..+++..++.++.|+++|
T Consensus        69 ----~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~  113 (257)
T cd08225          69 ----QENGRLFIVMEYCDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLG  113 (257)
T ss_pred             ----ccCCeEEEEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHH
Confidence                7788999999999999999998542  22358999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.66  E-value=2.5e-15  Score=103.46  Aligned_cols=121  Identities=45%  Similarity=0.776  Sum_probs=94.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.+.|.+.+.||+|+||.||++....+++.+|+|.+.........            +..|+.++..+..|||++++.+
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~------------~~~e~~~l~~~~~h~~i~~~~~   70 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------------IKQEINMLKKYSHHRNIATYYG   70 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHH------------HHHHHHHHHHhcCCCCeeeEee
Confidence            4567899999999999999999999888999999998754322111            3367788888755999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+...........+|++|||+.+|+|.+++....  +..+++..+..++.|++.|
T Consensus        71 ~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~  123 (272)
T cd06637          71 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRG  123 (272)
T ss_pred             EEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHH
Confidence            9854322122467999999999999999986422  2358999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=2.4e-15  Score=103.77  Aligned_cols=119  Identities=19%  Similarity=0.252  Sum_probs=92.1

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ....++|.+.+.||+|+||.||++.....     +..+++|.+...... ....         .+.+|+.++..+. |||
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-~~~~---------~~~~e~~~l~~~~-~~~   70 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM-RERI---------EFLNEASVMKEFN-CHH   70 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-HHHH---------HHHHHHHHHHhCC-CCc
Confidence            35667999999999999999999987543     367999987543211 1111         1457889999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------CCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++.+      ......+++|||+++|+|.+++......      ...+++..+..++.|++.|
T Consensus        71 i~~~~~~~------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  131 (277)
T cd05032          71 VVRLLGVV------STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG  131 (277)
T ss_pred             eeEEEEEE------cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHH
Confidence            99999998      6778899999999999999999643221      1247888999999999876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.66  E-value=4.2e-15  Score=102.02  Aligned_cols=114  Identities=27%  Similarity=0.459  Sum_probs=90.0

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.. .++..+|+|.+................     +.+|+.+++.+. |+|++++.+.+  
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~-----~~~e~~~l~~l~-~~~i~~~~~~~--   71 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEK-----LQEEVDLLKSLK-HVNIVQYLGTC--   71 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHH-----HHHHHHHHHhcC-CCCEeeEeeEe--
Confidence            478889999999999999985 577889999887533222111111111     568999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..++++||+++++|.+++...    ..+++..+..++.|++.|
T Consensus        72 ----~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  114 (265)
T cd06631          72 ----LDDNTISIFMEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDG  114 (265)
T ss_pred             ----ecCCeEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                6778999999999999999998532    248999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.66  E-value=3.4e-15  Score=101.72  Aligned_cols=115  Identities=26%  Similarity=0.407  Sum_probs=94.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|++|.||++.+..++..+++|.+............         +.+|+.+++.+. |+||+++++.+  
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~--   68 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKERED---------AVNEIRILASVN-HPNIISYKEAF--   68 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHH---------HHHHHHHHHhCC-CCCchhhhhhh--
Confidence            488999999999999999998888999999998754433222111         457889999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......++++||+++++|.+++......+..+++..++.++.|++.|
T Consensus        69 ----~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~a  115 (256)
T cd08530          69 ----LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG  115 (256)
T ss_pred             ----ccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence                56788999999999999999987644444568999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=9.7e-16  Score=106.30  Aligned_cols=114  Identities=26%  Similarity=0.422  Sum_probs=92.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..++..+|+|.+...... .....         +.+|+.++..+. |||++++++.+ 
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~-~~~~~---------~~~e~~~l~~~~-~~~i~~~~~~~-   68 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDE-SKFNQ---------IIMELDILHKAV-SPYIVDFYGAF-   68 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCH-HHHHH---------HHHHHHHHHhcC-CCcHHhhhhhe-
Confidence            4688999999999999999999888999999988643211 11111         457889999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|++|||+++++|..+++... ....+++..+..++.|++.|
T Consensus        69 -----~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~  114 (286)
T cd06622          69 -----FIEGAVYMCMEYMDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKG  114 (286)
T ss_pred             -----ecCCeEEEEEeecCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHH
Confidence                 67889999999999999988885321 12358999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.65  E-value=3.9e-15  Score=103.51  Aligned_cols=119  Identities=18%  Similarity=0.273  Sum_probs=89.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ....++|++.+.||+|+||.||++..+.     .+..+|+|.+........ ..         .+.+|+.+++.+. |||
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~---------~~~~e~~~l~~l~-~~~   70 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE-RI---------EFLNEASVMKGFT-CHH   70 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHH-HH---------HHHHHHHHHHhCC-CCC
Confidence            4567899999999999999999987542     234689998754321111 11         1457889999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------CCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++.+      ...+..+++|||+++|+|.++++.....      ...++...+..++.|++.|
T Consensus        71 i~~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (288)
T cd05061          71 VVRLLGVV------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG  131 (288)
T ss_pred             eeeEEEEE------cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            99999998      6677899999999999999999653321      1235677888899998765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.65  E-value=3.8e-15  Score=103.68  Aligned_cols=122  Identities=22%  Similarity=0.440  Sum_probs=94.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+....++|++.+.||+|+||.||++.....     ...+|+|.+..... .+....         +.+|+.++..+.+|
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~---------~~~E~~~l~~l~~h   75 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSD---------LVSEMEMMKMIGKH   75 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHH---------HHHHHHHHHhhcCC
Confidence            4566778999999999999999999987543     35688998764322 111111         45788999888449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh------------hCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK------------KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +||+++++.+      ...+.++++|||+++|+|.++++...            .....+++..++.++.|++.|
T Consensus        76 ~~i~~~~~~~------~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  144 (293)
T cd05053          76 KNIINLLGVC------TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARG  144 (293)
T ss_pred             CCeeeEEEEE------cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            9999999998      67788999999999999999996421            223358999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4.5e-15  Score=104.39  Aligned_cols=115  Identities=27%  Similarity=0.481  Sum_probs=94.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|++|.||++.+..++..+|+|.+.............        +..|+.++..+. ||+|+++++.+ 
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-~~~i~~~~~~~-   70 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKR--------VLTEQEILATLD-HPFLPTLYASF-   70 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHH--------HHHHHHHHHhCC-CCCchhheeee-
Confidence            47999999999999999999998889999999987543222111111        457899999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ......|++|||+.+++|.++++.  ..+..+++..++.++.|+++|
T Consensus        71 -----~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~  115 (316)
T cd05574          71 -----QTETYLCLVMDYCPGGELFRLLQR--QPGKCLSEEVARFYAAEVLLA  115 (316)
T ss_pred             -----ecCCEEEEEEEecCCCCHHHHHHh--CCCCccCHHHHHHHHHHHHHH
Confidence                 678899999999999999999853  223469999999999999875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.65  E-value=3.1e-15  Score=104.17  Aligned_cols=121  Identities=24%  Similarity=0.304  Sum_probs=89.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+...........         .+.+|+.+++.+..|||++++++++.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~---------~~~~E~~~l~~l~~~~~i~~~~~~~~   71 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPP---------TALREISLLQMLSESIYIVRLLDVEH   71 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCch---------HHHHHHHHHHHccCCCCccceeeeEe
Confidence            468999999999999999999988999999998764322111111         14578899999975799999999884


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-CCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~qi~~a  151 (152)
                      .... ......|++|||+++ +|.+++...... +..+++..++.++.||++|
T Consensus        72 ~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  122 (295)
T cd07837          72 VEEK-NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG  122 (295)
T ss_pred             ecCC-CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence            2111 112238999999975 888888643322 3458999999999999876

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.65  E-value=1.5e-15  Score=107.34  Aligned_cols=108  Identities=20%  Similarity=0.401  Sum_probs=84.3

Q ss_pred             EEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|+||.||++...   .+++.+|+|.+.........  ....     .+..|+.+++.+. ||||+++++.+    
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~-----~~~~E~~il~~l~-hp~iv~~~~~~----   69 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQ--KDTA-----HTKAERNILEAVK-HPFIVDLIYAF----   69 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhh--hhHH-----HHHHHHHHHHhCC-CCchhceeeEE----
Confidence            57999999999999863   46788999998753211110  0001     1457999999998 99999999999    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        ...+.+|++|||+++|+|.+++..   . ..+++..+..++.|++.|
T Consensus        70 --~~~~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~qi~~~  112 (323)
T cd05584          70 --QTGGKLYLILEYLSGGELFMHLER---E-GIFMEDTACFYLSEISLA  112 (323)
T ss_pred             --ecCCeEEEEEeCCCCchHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence              678889999999999999998843   2 258999999999999876

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.65  E-value=8.8e-15  Score=99.60  Aligned_cols=115  Identities=29%  Similarity=0.501  Sum_probs=94.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||.|+||.||++.+..++..+++|.+............         +..|+.+++.+. |||++++.+.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~~~~~~~~~--   68 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKERED---------ALNEVKILKKLN-HPNIIKYYESF--   68 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHH---------HHHHHHHHHhcC-CCChhheEEEE--
Confidence            588999999999999999999888999999998754332111111         457889999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..++++|++++++|.+++......+..+++..+..++.|+++|
T Consensus        69 ----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  115 (258)
T cd08215          69 ----EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA  115 (258)
T ss_pred             ----ecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHH
Confidence                56789999999999999999997543333569999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.65  E-value=8.5e-15  Score=100.53  Aligned_cols=117  Identities=31%  Similarity=0.487  Sum_probs=90.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||.+.+..++..+++|.+.......... .....     +.+|+.+++.+. |||++++++++.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~-~~~~~-----~~~E~~~l~~l~-h~~i~~~~~~~~   74 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETS-KEVNA-----LECEIQLLKNLL-HERIVQYYGCLR   74 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccH-HHHHH-----HHHHHHHHHhcC-CCCeeeEEeEec
Confidence            57999999999999999999998889999999886432211111 11111     557999999998 999999999873


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .    .....++++|||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        75 ~----~~~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~  118 (265)
T cd06652          75 D----PMERTLSIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEG  118 (265)
T ss_pred             c----CCCceEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            1    1235688999999999999988532    248899999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.65  E-value=3.7e-15  Score=103.20  Aligned_cols=112  Identities=29%  Similarity=0.494  Sum_probs=89.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.++.+++.+|+|.+........ ... .       +.+|+.+++.+. |||++++++.+ 
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-~~~-~-------~~~e~~~l~~~~-h~~i~~~~~~~-   69 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-IKK-I-------ALREIRMLKQLK-HPNLVNLIEVF-   69 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-ccH-H-------HHHHHHHHHhCC-CCCEeeeeeEE-
Confidence            479999999999999999999988899999998864322111 111 0       347889999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ......+++|||+++++|..++.   . ...+++..++.++.|++.|
T Consensus        70 -----~~~~~~~~v~e~~~~~~l~~~~~---~-~~~~~~~~~~~~~~ql~~~  112 (286)
T cd07847          70 -----RRKRKLHLVFEYCDHTVLNELEK---N-PRGVPEHLIKKIIWQTLQA  112 (286)
T ss_pred             -----eeCCEEEEEEeccCccHHHHHHh---C-CCCCCHHHHHHHHHHHHHH
Confidence                 67888999999999887766653   2 2258999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.65  E-value=2.2e-15  Score=104.91  Aligned_cols=116  Identities=31%  Similarity=0.558  Sum_probs=94.3

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...+.+.|++++.||.|+||.||++.+..++..+++|.+....  ......         +..|+.+++.+. |||++++
T Consensus         7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~---------~~~e~~~l~~l~-h~~i~~~   74 (292)
T cd06644           7 DLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELED---------YMVEIEILATCN-HPYIVKL   74 (292)
T ss_pred             ccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHH---------HHHHHHHHHhCC-CCcEeee
Confidence            3456788999999999999999999998889999999986431  111111         446888899998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ..++..+++|||+++++|..++...   ...+++..++.++.|++.|
T Consensus        75 ~~~~------~~~~~~~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~  122 (292)
T cd06644          75 LGAF------YWDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEA  122 (292)
T ss_pred             EEEE------EeCCeEEEEEecCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHH
Confidence            9998      6778899999999999998877432   2358999999999999876

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0578|consensus

Probab=99.65  E-value=2.4e-16  Score=114.36  Aligned_cols=114  Identities=42%  Similarity=0.626  Sum_probs=97.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++...|...+.||+|.-|.||.+....+++.||+|.+.......++.           +.+|+.+|+..+ |+|||.++
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keL-----------ilnEi~Vm~~~~-H~NiVnfl  336 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKEL-----------LLNEILVMRDLH-HPNIVNFL  336 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhh-----------hHHHHHHHHhcc-chHHHHHH
Confidence            567788999999999999999999999999999999998655444333           458999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +.|+      ..+.+|+||||++||+|.|.+..     ..++|.++..++.++++|+
T Consensus       337 ~Syl------v~deLWVVMEym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL  382 (550)
T KOG0578|consen  337 DSYL------VGDELWVVMEYMEGGSLTDVVTK-----TRMTEGQIAAICREILQGL  382 (550)
T ss_pred             HHhc------ccceeEEEEeecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHH
Confidence            9994      56889999999999999999842     2499999999999998873

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.65  E-value=4.4e-15  Score=102.83  Aligned_cols=107  Identities=26%  Similarity=0.398  Sum_probs=87.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..++..+|+|.+..... .. ...        .+.+|+.++..+. |||++++++.+ 
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~-~~~--------~~~~E~~~l~~l~-h~~iv~~~~~~-   68 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VE-LQK--------QIMSELEILYKCD-SPYIIGFYGAF-   68 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hH-HHH--------HHHHHHHHHHhCC-CCCeeeEEEEE-
Confidence            468899999999999999999988999999998865321 11 111        1457899999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++..+++|||+++++|..+.        .+++..+..++.|++.|
T Consensus        69 -----~~~~~~~lv~e~~~~~~l~~~~--------~~~~~~~~~~~~qi~~~  107 (279)
T cd06619          69 -----FVENRISICTEFMDGGSLDVYR--------KIPEHVLGRIAVAVVKG  107 (279)
T ss_pred             -----EECCEEEEEEecCCCCChHHhh--------cCCHHHHHHHHHHHHHH
Confidence                 6778899999999999886542        37899999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.65  E-value=4.7e-15  Score=102.47  Aligned_cols=119  Identities=18%  Similarity=0.298  Sum_probs=90.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ....++|++.+.||+|+||.||.+.+..     .+..+|+|.+..... .....         .+.+|+.+++.+. |||
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~---------~~~~e~~~l~~l~-~~~   70 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERI---------EFLNEASVMKEFN-CHH   70 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHH---------HHHHHHHHHHhCC-CCC
Confidence            4567889999999999999999987642     345689998753221 11111         1557899999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------CCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++.+      ...+..+++|||+++|+|.++++..+..      ...+++..+..++.|+++|
T Consensus        71 iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (277)
T cd05062          71 VVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADG  131 (277)
T ss_pred             eeeEEEEE------cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHH
Confidence            99999998      6778899999999999999999643221      1236778888899998876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.65  E-value=2.5e-15  Score=108.13  Aligned_cols=110  Identities=24%  Similarity=0.375  Sum_probs=86.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+...........         .+.+|+.+++.++ ||||+++++++  
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~---------~~~~E~~~l~~l~-h~niv~~~~~~--   68 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCK---------RVFRELKMLCFFK-HDNVLSALDIL--   68 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHH---------HHHHHHHHHHhCC-CCCcCCHhhee--
Confidence            47889999999999999999988999999998864322111111         1457999999998 99999999998  


Q ss_pred             cCCCCCCc-----eEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEED-----QLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+     .+|++|||+. ++|.+++.   . +..+++..++.++.|++.|
T Consensus        69 ----~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~-~~~l~~~~~~~~~~qi~~a  115 (372)
T cd07853          69 ----QPPHIDPFEEIYVVTELMQ-SDLHKIIV---S-PQPLSSDHVKVFLYQILRG  115 (372)
T ss_pred             ----cCCCccccceEEEEeeccc-cCHHHHHh---c-CCCCCHHHHHHHHHHHHHH
Confidence                3443     7999999995 67877773   2 2359999999999999876

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.65  E-value=3.8e-15  Score=102.22  Aligned_cols=114  Identities=23%  Similarity=0.387  Sum_probs=93.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|.+.+.||+|++|.||++.....++.+++|.+.........            +.+|+.++..+. |||++++++
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~~~   69 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------------FLKEAAVMKEIK-HPNLVQLLG   69 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHH------------HHHHHHHHHhCC-CCChhheEE
Confidence            3456799999999999999999999888999999988643211111            447889999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ..++.++++|||+++++|.+++....  ...+++..++.++.|+++|
T Consensus        70 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~  116 (263)
T cd05052          70 VC------TREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSA  116 (263)
T ss_pred             EE------cCCCCcEEEEEeCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHH
Confidence            98      67788999999999999999985422  2358999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.64  E-value=3.6e-15  Score=102.34  Aligned_cols=110  Identities=38%  Similarity=0.601  Sum_probs=83.8

Q ss_pred             EEEEEeeccceeEEEEEEEc----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          23 KLQELIGEGTYGEVYWAKDV----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ++.+.||.|.||.||+|...    ..+..+++|.++... ..+....         +.+|+..+..++ ||||+++++++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-~~~~~~~---------~~~e~~~l~~l~-h~ni~~~~g~~   70 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-SEEEEEE---------FLNEIQILRKLR-HPNIVKLYGFC   70 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-SHHHHHH---------HHHHHHHHHTHS-BTTBE-EEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-cccccee---------eeeccccccccc-ccccccccccc
Confidence            56789999999999999987    234568999985422 1111111         557899999997 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..++++||+++|+|.+++...  ....+++..+..++.||++|
T Consensus        71 ------~~~~~~~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~  115 (259)
T PF07714_consen   71 ------IENEPLFLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEA  115 (259)
T ss_dssp             ------ESSSSEEEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHH
T ss_pred             ------ccccccccccccccccccccccccc--cccccccccccccccccccc
Confidence                  4556699999999999999999643  23359999999999999886

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.64  E-value=9.3e-15  Score=102.14  Aligned_cols=114  Identities=39%  Similarity=0.614  Sum_probs=94.2

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...+..+|++++.||+|+||.||++.+..++..+++|.+..........           +.+|+.+++.+. |||++++
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-----------~~~e~~~l~~~~-h~~i~~~   81 (297)
T cd06656          14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKEL-----------IINEILVMRENK-NPNIVNY   81 (297)
T ss_pred             cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHH-----------HHHHHHHHHhCC-CCCEeeE
Confidence            3456689999999999999999999988899999999987533221111           347888898888 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...++.|++|||+++++|.+++..     ..+++..+..++.|++.|
T Consensus        82 ~~~~------~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~  127 (297)
T cd06656          82 LDSY------LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQA  127 (297)
T ss_pred             EEEE------ecCCEEEEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHH
Confidence            9999      678889999999999999998842     248999999999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.64  E-value=5.1e-15  Score=103.82  Aligned_cols=122  Identities=20%  Similarity=0.401  Sum_probs=93.0

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+....++|.+.+.||+|+||.||++.+..       ....+|+|.+...... .....         +..|+.++..+.
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~---------~~~e~~~l~~l~   81 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE-KDLSD---------LISEMEMMKMIG   81 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh-HHHHH---------HHHHHHHHHHhc
Confidence            455667899999999999999999997643       2346899988643211 11111         446888899885


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +||||+++++.+      ...+..|++|||+++|+|.+++...+.            ....+++..++.++.|++.|
T Consensus        82 ~h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  152 (307)
T cd05098          82 KHKNIINLLGAC------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARG  152 (307)
T ss_pred             CCCCEeeEEEEE------ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHH
Confidence            599999999998      667789999999999999999965321            11248899999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.64  E-value=4.8e-15  Score=103.39  Aligned_cols=112  Identities=26%  Similarity=0.411  Sum_probs=90.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch--hhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI--EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      +|++.+.||+|++|.||++.+..+++.+++|.+.......  .....        .+..|+.+++.+. |+|++++++.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~--------~~~~e~~~l~~~~-h~~i~~~~~~~   71 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINF--------TALREIKLLQELK-HPNIIGLLDVF   71 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhH--------HHHHHHHHHhhcC-CCCChhhhhee
Confidence            4788999999999999999998889999999987543321  11111        1346888999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.+++||||+ +|+|.++++..   ...+++..++.++.||++|
T Consensus        72 ------~~~~~~~lv~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~a  114 (298)
T cd07841          72 ------GHKSNINLVFEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRG  114 (298)
T ss_pred             ------ecCCEEEEEEccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHH
Confidence                  6678899999999 99999998532   1259999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.64  E-value=3e-15  Score=103.72  Aligned_cols=112  Identities=27%  Similarity=0.425  Sum_probs=90.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+....... .... .       +.+|+.+++.+. |||++++++.+ 
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~-~-------~~~e~~~l~~l~-h~~i~~~~~~~-   69 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKK-I-------AMREIRMLKQLR-HENLVNLIEVF-   69 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhH-H-------HHHHHHHHHhcC-CcchhhHHHhc-
Confidence            47899999999999999999998889999999876432221 1111 1       447899999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..++++||+++++|.++..   . ...+++..++.++.|+++|
T Consensus        70 -----~~~~~~~lv~e~~~~~~l~~~~~---~-~~~~~~~~~~~~~~~i~~~  112 (286)
T cd07846          70 -----RRKKRLYLVFEFVDHTVLDDLEK---Y-PNGLDESRVRKYLFQILRG  112 (286)
T ss_pred             -----ccCCeEEEEEecCCccHHHHHHh---c-cCCCCHHHHHHHHHHHHHH
Confidence                 78889999999999888877653   2 2248999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.64  E-value=5.9e-15  Score=102.18  Aligned_cols=112  Identities=25%  Similarity=0.342  Sum_probs=90.2

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||.|++|.||++.+..++..+++|.+........ ...         +.+|+.+++.+. |||++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-~~~---------~~~E~~~l~~l~-h~~i~~~~~~~--   67 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT-PST---------AIREISLMKELK-HENIVRLHDVI--   67 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccc-hHH---------HHHHHHHHHhhc-CCCEeeeeeeE--
Confidence            58899999999999999999988899999999875322111 111         346889999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||++ ++|.+++..... ...+++..+..++.|+++|
T Consensus        68 ----~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~  112 (284)
T cd07836          68 ----HTENKLMLVFEYMD-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKG  112 (284)
T ss_pred             ----eeCCcEEEEEecCC-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHH
Confidence                67788999999997 588888854332 2358999999999999876

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.64  E-value=7.4e-15  Score=102.91  Aligned_cols=117  Identities=26%  Similarity=0.405  Sum_probs=89.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCe--EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDH--VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~--~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .++|++.+.||+|+||.||++.++.++..  +++|.+.....  .....        .+.+|+.++..+.+||||+++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~--~~~~~--------~~~~Ei~~l~~l~~h~~iv~~~~   75 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHR--------DFAGELEVLCKLGHHPNIINLLG   75 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC--HHHHH--------HHHHHHHHHHHhcCCCCcceEEE
Confidence            45899999999999999999998777654  46665543211  11111        14578899999844999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+.+|++|||+++|+|.++++....            .+..+++..++.++.|++.|
T Consensus        76 ~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  136 (303)
T cd05088          76 AC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  136 (303)
T ss_pred             EE------CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHH
Confidence            99      778889999999999999999964321            12358999999999999876

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.64  E-value=4.4e-15  Score=101.72  Aligned_cols=113  Identities=23%  Similarity=0.424  Sum_probs=90.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.. .+++.+|+|.+.........            +.+|+.+++.+. |||+++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i~~~~   67 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEA------------FLAEANLMKQLQ-HPRLVRLY   67 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHH------------HHHHHHHHHhcC-CcCeeeEE
Confidence            45678999999999999999999985 45678999988754332211            457889999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+       ..+..+++|||+++++|.+++...  .+..+++..+..++.|++.|
T Consensus        68 ~~~-------~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~a  114 (260)
T cd05067          68 AVV-------TQEPIYIITEYMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEG  114 (260)
T ss_pred             EEE-------ccCCcEEEEEcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHH
Confidence            876       345689999999999999998532  23458999999999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4278|consensus

Probab=99.64  E-value=4.4e-16  Score=115.15  Aligned_cols=118  Identities=22%  Similarity=0.391  Sum_probs=99.2

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +.|.-.+.+......||-|.||.||.+.++...-.+|+|.++-+.+..++            |+.|+.+|+.+. |||+|
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveE------------FLkEAAvMKeik-HpNLV  326 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------------FLKEAAVMKEIK-HPNLV  326 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHH------------HHHHHHHHHhhc-CccHH
Confidence            45666677788888999999999999999998889999988765554444            456888888888 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|++++      ..+..+|||+|||..|+|.+|++.+.+.  -++.-.+++++.||.+|
T Consensus       327 qLLGVC------T~EpPFYIiTEfM~yGNLLdYLRecnr~--ev~avvLlyMAtQIsSa  377 (1157)
T KOG4278|consen  327 QLLGVC------THEPPFYIITEFMCYGNLLDYLRECNRS--EVPAVVLLYMATQISSA  377 (1157)
T ss_pred             HHhhhh------ccCCCeEEEEecccCccHHHHHHHhchh--hcchhHHHHHHHHHHHH
Confidence            999999      7888899999999999999999765443  37888888999999876

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.64  E-value=7.4e-15  Score=100.52  Aligned_cols=114  Identities=25%  Similarity=0.397  Sum_probs=92.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.++|.+.+.||+|+||.||++... .+..+++|.+.........            +.+|+.+++.+. |+|+++++
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~~   67 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEA------------FLQEAQIMKKLR-HDKLVQLY   67 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHH------------HHHHHHHHhhCC-CCCEeeee
Confidence            356789999999999999999999864 4567899988754332221            446888999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ......+++|||+++++|.+++...  .+..+++..+..++.|++.|
T Consensus        68 ~~~------~~~~~~~~v~e~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~a  115 (261)
T cd05034          68 AVC------SEEEPIYIVTEYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEG  115 (261)
T ss_pred             eee------ecCCceEEEEeccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHH
Confidence            998      6678899999999999999998542  22358999999999999876

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.64  E-value=8e-15  Score=105.01  Aligned_cols=118  Identities=24%  Similarity=0.365  Sum_probs=89.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.++ ||||+++++
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~niv~~~~   87 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR---------AYRELVLLKCVN-HKNIISLLN   87 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHH---------HHHHHHHHHhCC-CCCEeeeee
Confidence            3567899999999999999999999889999999998754322211111         447899999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++...........+|++|||++ ++|.+.+.   .   .+++..+..++.|++.|
T Consensus        88 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~---~~~~~~~~~~~~qi~~~  135 (359)
T cd07876          88 VFTPQKSLEEFQDVYLVMELMD-ANLCQVIH---M---ELDHERMSYLLYQMLCG  135 (359)
T ss_pred             eeccCCCccccceeEEEEeCCC-cCHHHHHh---c---cCCHHHHHHHHHHHHHH
Confidence            8843222122346899999995 46666652   1   38899999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.64  E-value=3.7e-15  Score=102.84  Aligned_cols=114  Identities=29%  Similarity=0.446  Sum_probs=93.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||++....++..+++|++.............        +.+|..++..+..||||+++++.+ 
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~--------~~~e~~~~~~l~~~~~i~~~~~~~-   71 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKY--------VKIEKEVLTRLNGHPGIIKLYYTF-   71 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHH--------HHHHHHHHHhcccCCCchhHHHHh-
Confidence            47999999999999999999998899999999887533222111111        457888888886699999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++||++++++|.+++..   . ..+++..++.++.|++.|
T Consensus        72 -----~~~~~~~lv~e~~~~~~L~~~l~~---~-~~l~~~~~~~i~~ql~~~  114 (280)
T cd05581          72 -----QDEENLYFVLEYAPNGELLQYIRK---Y-GSLDEKCTRFYAAEILLA  114 (280)
T ss_pred             -----cCCceEEEEEcCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                 678889999999999999999853   2 259999999999999876

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.64  E-value=6.6e-15  Score=100.74  Aligned_cols=110  Identities=21%  Similarity=0.351  Sum_probs=88.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.... +..+|+|.+.........            +.+|+.++..+. ||||+++++++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~~~~~   68 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDE------------FIEEAKVMMKLS-HEKLVQLYGVC   68 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHH------------HHHHHHHHhcCC-CCCeeeEEEEE
Confidence            4679999999999999999997643 445899988643222111            447889999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++|+|.++++..   ...+++..++.++.|++.|
T Consensus        69 ------~~~~~~~lv~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~  112 (256)
T cd05113          69 ------TKQRPIYIVTEYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEG  112 (256)
T ss_pred             ------ccCCCcEEEEEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence                  6677899999999999999998532   2258999999999999876

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.64  E-value=1.4e-14  Score=101.27  Aligned_cols=115  Identities=40%  Similarity=0.617  Sum_probs=94.6

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ....+..+|++.+.||+|+||.||++.+..++..+++|.+..........           +.+|+.+++.+. |||+++
T Consensus        14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~-----------~~~e~~~l~~~~-h~~v~~   81 (296)
T cd06654          14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-----------IINEILVMRENK-NPNIVN   81 (296)
T ss_pred             ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHH-----------HHHHHHHHHhCC-CCCEee
Confidence            34566789999999999999999999988889999999887543221111           447888898887 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ....+.|++|||+++++|.+++..     ..+++..+..++.|++.|
T Consensus        82 ~~~~~------~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~a  128 (296)
T cd06654          82 YLDSY------LVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQA  128 (296)
T ss_pred             EEEEE------EeCCEEEEeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHH
Confidence            99998      567889999999999999998842     248999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.64  E-value=3.2e-15  Score=103.57  Aligned_cols=111  Identities=27%  Similarity=0.413  Sum_probs=89.2

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..++..+++|.++..........         .+.+|+.+++.++ |||++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~---------~~~~ei~~l~~l~-h~~i~~~~~~~--   68 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPS---------SALREICLLKELK-HKNIVRLYDVL--   68 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCcc---------chhHHHHHHHhcC-CCCeeeHHHHh--
Confidence            48899999999999999999988999999999874322111111         1446889999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......++++||++ ++|.+++..   .+..+++..++.++.||++|
T Consensus        69 ----~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~a  111 (284)
T cd07839          69 ----HSDKKLTLVFEYCD-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKG  111 (284)
T ss_pred             ----ccCCceEEEEecCC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence                67788999999996 578887742   22359999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.64  E-value=7.3e-15  Score=101.82  Aligned_cols=114  Identities=25%  Similarity=0.398  Sum_probs=88.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEE----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKD----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ..+|++.+.||+|+||.||++..    ..++..+++|.+.....  ... ..        +.+|+.++..+. |||++++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~--~~~-~~--------~~~e~~~l~~l~-h~~iv~~   70 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA--EHL-RD--------FEREIEILKSLQ-HDNIVKY   70 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH--HHH-HH--------HHHHHHHHHhCC-CCCeeEE
Confidence            45899999999999999999974    34677899998764321  111 11        557999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+..    .....++++|||+++|+|.+++...   ...+++..++.++.|++.|
T Consensus        71 ~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~a  120 (284)
T cd05081          71 KGVCYS----AGRRNLRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKG  120 (284)
T ss_pred             EEEEcc----CCCCceEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHH
Confidence            987632    3345689999999999999998532   2358999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=2e-15  Score=104.70  Aligned_cols=112  Identities=21%  Similarity=0.352  Sum_probs=91.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.+..+++.+|+|.+.....  ......        +.+|+.++..++ |||++++++.+
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~--~~~~~~--------~~~E~~~l~~l~-h~~i~~~~~~~   72 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK--SSVRKQ--------ILRELQIMHECR-SPYIVSFYGAF   72 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc--chHHHH--------HHHHHHHHHHcC-CCCcceEeeeE
Confidence            4678899999999999999999988899999998764321  111111        457899999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.++++|||+++++|.++++.   . ..+++..+..++.|++.|
T Consensus        73 ------~~~~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~~i~~~  115 (284)
T cd06620          73 ------LNENNICMCMEFMDCGSLDRIYKK---G-GPIPVEILGKIAVAVVEG  115 (284)
T ss_pred             ------ecCCEEEEEEecCCCCCHHHHHHh---c-cCCCHHHHHHHHHHHHHH
Confidence                  677899999999999999988843   2 258999999999988765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.64  E-value=1.1e-15  Score=104.96  Aligned_cols=113  Identities=41%  Similarity=0.767  Sum_probs=92.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.++|++.+.||+|+||.||++.+..++..+++|.++.....  ....         +.+|+.++..+. |||++++++
T Consensus         6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~---------~~~e~~~~~~l~-h~~ii~~~~   73 (267)
T cd06645           6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE--DFAV---------VQQEIIMMKDCK-HSNIVAYFG   73 (267)
T ss_pred             CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh--HHHH---------HHHHHHHHHhCC-CCCeeeEEE
Confidence            3456888999999999999999999888999999998753211  1111         346888899998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..|++|||+++++|.+++..   . ..+++..++.++.|++.|
T Consensus        74 ~~------~~~~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~~i~~~  118 (267)
T cd06645          74 SY------LRRDKLWICMEFCGGGSLQDIYHV---T-GPLSESQIAYVSRETLQG  118 (267)
T ss_pred             EE------EeCCEEEEEEeccCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            98      677889999999999999998842   2 258999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1151|consensus

Probab=99.64  E-value=5.1e-17  Score=115.95  Aligned_cols=122  Identities=27%  Similarity=0.393  Sum_probs=98.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhH-HHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI-EEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +...++|-++..||+|+|+.||++.+....+.+|+|+-..+..+.++- .+...     +..+|..+.+.+. ||.||++
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhK-----HAcREyrIHKeLD-HpRIVKl  532 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHK-----HACREYRIHKELD-HPRIVKL  532 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHH-----HHHHHHhhhhccC-cceeeee
Confidence            344667888999999999999999998888999999876555544322 22222     2678999999999 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      |++|.     -+.+.+|-|+|||+|.||..+++.++    .+++..++.|+.||+.|+
T Consensus       533 YDyfs-----lDtdsFCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL  581 (775)
T KOG1151|consen  533 YDYFS-----LDTDSFCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNAL  581 (775)
T ss_pred             eeeee-----eccccceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHH
Confidence            99994     45677999999999999999995433    599999999999998873

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.64  E-value=7.6e-15  Score=101.08  Aligned_cols=115  Identities=30%  Similarity=0.441  Sum_probs=91.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh----HHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE----IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~----~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      +|.+.+.||+|+||.||++....++..+|+|.+.........    ......     .+..|+.++..+. |||++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~l~~l~-h~~i~~~~~   75 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVK-----ALRSEIETLKDLD-HLNIVQYLG   75 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHH-----HHHHHHHHHHhcC-CCCcceEEE
Confidence            578889999999999999998888999999988642211111    111111     1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++++|.++++..    ..+++..++.++.|++.|
T Consensus        76 ~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~  120 (272)
T cd06629          76 FE------TTEEYLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEG  120 (272)
T ss_pred             Ee------ccCCceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHH
Confidence            88      6788899999999999999998532    258999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.63  E-value=1.7e-14  Score=98.53  Aligned_cols=114  Identities=25%  Similarity=0.451  Sum_probs=90.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|++.+.||+|++|.||++.+..+++.+++|.+............         +.+|+.+++.+. |+|++++++.+. 
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~~-   69 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKA---------AEQEAQLLSQLK-HPNIVAYRESWE-   69 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHH---------HHHHHHHHHhCC-CCCeeeeeeeec-
Confidence            489999999999999999999888899999998643222221111         457889999998 999999998772 


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ..+..+|++|||+++++|.+++...  .+..+++..++.++.|++.|
T Consensus        70 ----~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~  114 (257)
T cd08223          70 ----GEDGLLYIVMGFCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMA  114 (257)
T ss_pred             ----CCCCEEEEEecccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHH
Confidence                2455689999999999999998642  23358999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.63  E-value=1e-15  Score=104.80  Aligned_cols=114  Identities=23%  Similarity=0.365  Sum_probs=92.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+..+|++.+.||+|+||.||++.+.. +..+++|.+.......  .. .        +..|+.+++.++ |||++++++
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~--~~-~--------~~~e~~~l~~l~-~~~i~~~~~   69 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLK--QQ-D--------FQKEVQALKRLR-HKHLISLFA   69 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhh--HH-H--------HHHHHHHHhcCC-Ccchhheee
Confidence            355689999999999999999999866 7889999886532211  11 1        447888999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ......+++|||+++++|.++++..  .+..+++..++.++.|++.|
T Consensus        70 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~a  116 (261)
T cd05148          70 VC------SVGEPVYIITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEG  116 (261)
T ss_pred             eE------ecCCCeEEEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHH
Confidence            88      6778899999999999999999642  23358999999999999876

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.63  E-value=4.1e-15  Score=103.79  Aligned_cols=117  Identities=20%  Similarity=0.369  Sum_probs=88.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC----------------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE----------------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV   81 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~   81 (152)
                      +.++|++.+.||+|+||.||++.+..                ++..+|+|.+.....  .....        .+.+|+.+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~--~~~~~--------~~~~E~~~   72 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN--KNARN--------DFLKEIKI   72 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC--HHHHH--------HHHHHHHH
Confidence            56789999999999999999986432                234588888764321  11111        14579999


Q ss_pred             HhccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-------CCCCCHHHHHHHHHhhhcc
Q psy2812          82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        82 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..+. |+||+++++.+      ...+..+++|||+++|+|.+++......       ...+++..+..++.|++.|
T Consensus        73 l~~l~-~~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a  142 (296)
T cd05095          73 MSRLK-DPNIIRLLAVC------ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG  142 (296)
T ss_pred             HHhCC-CCCcceEEEEE------ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence            99998 99999999998      5677899999999999999998643211       1247788999999999876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=2.5e-14  Score=98.18  Aligned_cols=117  Identities=32%  Similarity=0.506  Sum_probs=90.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+........ .......     +.+|+.+++.+. |||++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~-----~~~ei~~l~~l~-h~~i~~~~~~~~   74 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE-TSKEVNA-----LECEIQLLKNLR-HDRIVQYYGCLR   74 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch-hhHHHHH-----HHHHHHHHHHcC-CCCcceEEEEEE
Confidence            579999999999999999999988899999998753221111 1111111     568999999998 999999999873


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .    .....+++++||+++++|.+++..   . ..+++..++.++.|+++|
T Consensus        75 ~----~~~~~~~~v~e~~~~~~L~~~~~~---~-~~l~~~~~~~~~~~i~~a  118 (264)
T cd06653          75 D----PEEKKLSIFVEYMPGGSIKDQLKA---Y-GALTENVTRRYTRQILQG  118 (264)
T ss_pred             c----CCCCEEEEEEEeCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            2    224568999999999999998842   2 248999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.63  E-value=1.9e-14  Score=98.67  Aligned_cols=114  Identities=28%  Similarity=0.470  Sum_probs=92.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||.|+||.||++....++..+++|.+....... ....         +.+|+.+++.+. |+|++++++.+ 
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~-   68 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDE---------LRKEVQAMSQCN-HPNVVKYYTSF-   68 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHH---------HHHHHHHHHhcC-CCCEEEEEEEE-
Confidence            47999999999999999999988888899999886433222 1111         457888899998 99999999988 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++||++++++|.++++.... ...+++..+..++.|++.|
T Consensus        69 -----~~~~~~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~a  114 (267)
T cd06610          69 -----VVGDELWLVMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKG  114 (267)
T ss_pred             -----eeCCEEEEEEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHH
Confidence                 678889999999999999999964322 1358999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.63  E-value=1.2e-14  Score=99.85  Aligned_cols=113  Identities=21%  Similarity=0.303  Sum_probs=89.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++|+..+.||+|+||.||++....++.   .+++|.+...... .....         +..|+.++..+. |||++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~---------~~~e~~~l~~l~-h~~i~~~~   72 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-KQRQD---------FLSEASIMGQFS-HHNIIRLE   72 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH-HHHHH---------HHHHHHHHhcCC-CCCeeEEE
Confidence            4578999999999999999999865554   6888887643211 11111         457889999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..+++|||+++++|.+++..   ....+++..+..++.|++.|
T Consensus        73 ~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~a  119 (268)
T cd05063          73 GVV------TKFKPAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAG  119 (268)
T ss_pred             EEE------ccCCCcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            999      678889999999999999999853   22358999999999998876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.63  E-value=1.7e-14  Score=98.81  Aligned_cols=111  Identities=31%  Similarity=0.583  Sum_probs=91.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|+||.||++.+..++..+++|.+.......... ..        +..|+.+++.++ |+||+++++.+  
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-~~--------~~~e~~~~~~l~-~~~i~~~~~~~--   68 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTI-KE--------IADEMKVLELLK-HPNLVKYYGVE--   68 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHH-HH--------HHHHHHHHHhCC-CCChhheeeeE--
Confidence            4889999999999999999988889999999987554321111 11        557999999998 99999999988  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+.+++++||+++++|.+++..    +..+++..+..++.|++.|
T Consensus        69 ----~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~  111 (264)
T cd06626          69 ----VHREKVYIFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEG  111 (264)
T ss_pred             ----ecCCEEEEEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHH
Confidence                677889999999999999999852    2248899999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.63  E-value=8.6e-15  Score=100.31  Aligned_cols=113  Identities=24%  Similarity=0.346  Sum_probs=91.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|++|.||++.+. .++.+|+|.+.......+.            +.+|+.+++.+. |||++++++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~~~   68 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKD------------FLAEAQIMKKLR-HPKLIQLYA   68 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHH------------HHHHHHHHHHCC-CCCccceeE
Confidence            45678999999999999999999864 4567999988653322111            446888999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++++|.++++...  +..+++..+..++.|++.|
T Consensus        69 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~  115 (261)
T cd05068          69 VC------TLEEPIYIVTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASG  115 (261)
T ss_pred             EE------ecCCCeeeeeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHH
Confidence            88      67788999999999999999985422  2358999999999999876

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.62  E-value=1e-14  Score=100.13  Aligned_cols=115  Identities=25%  Similarity=0.414  Sum_probs=90.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchh--h-HHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE--E-IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~--~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +|.+...||+|++|.||++.+..++..+++|.+........  . .......     +.+|+.+++.+. |||++++++.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-----~~~e~~~l~~l~-h~~i~~~~~~   74 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDA-----LAREIALLKELQ-HENIVQYLGS   74 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHH-----HHHHHHHHHhcC-CCCeeeEEEE
Confidence            36778899999999999999888889999998864432211  1 1111111     558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.++++..    ..+++..+..++.|++.|
T Consensus        75 ~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~  118 (267)
T cd06628          75 S------LDADHLNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKG  118 (267)
T ss_pred             E------EeCCccEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHH
Confidence            8      6678899999999999999999532    258999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.62  E-value=7.6e-15  Score=101.47  Aligned_cols=111  Identities=38%  Similarity=0.603  Sum_probs=90.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .+-|+..+.||+|+||.||++.+..++..+|+|.+...... ... .        .+.+|+.++..+. |||++++++.+
T Consensus         3 ~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~-~--------~~~~e~~~l~~l~-h~~iv~~~~~~   71 (277)
T cd06641           3 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEI-E--------DIQQEITVLSQCD-SPYVTKYYGSY   71 (277)
T ss_pred             HHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch-HHH-H--------HHHHHHHHHHhcC-CCCEeEEEEEE
Confidence            35678889999999999999998888999999987643211 111 1        1457888999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ......+++|||+++++|.+++..     ..+++..+..++.|++.|
T Consensus        72 ------~~~~~~~lv~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~  113 (277)
T cd06641          72 ------LKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKG  113 (277)
T ss_pred             ------EeCCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHH
Confidence                  677889999999999999988842     248999999999998865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.62  E-value=9.6e-15  Score=100.27  Aligned_cols=112  Identities=27%  Similarity=0.407  Sum_probs=88.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.++|.+.+.||+|+||.||++.+..+ ..+++|.+.......+.            +.+|+.++..+. |||++++++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~------------~~~E~~~l~~l~-~~~i~~~~~   68 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA------------FLQEAQVMKKLR-HEKLVQLYA   68 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHH------------HHHHHHHHHhCC-CCCcceEEE
Confidence            4567899999999999999999987554 46899988753321111            457889999998 999999998


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      . ....+++|||+++|+|.++++..  .+..+++..+..++.|+++|
T Consensus        69 ~~------~-~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~a  114 (262)
T cd05071          69 VV------S-EEPIYIVTEYMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASG  114 (262)
T ss_pred             EE------C-CCCcEEEEEcCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHH
Confidence            77      3 35589999999999999999642  22358999999999999876

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.62  E-value=2.1e-14  Score=98.66  Aligned_cols=117  Identities=31%  Similarity=0.453  Sum_probs=91.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|+..+.||+|+||.||++.+..++..+++|.+......... ......     +.+|+.+++.++ ||||+++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~-~~~~~~-----~~~e~~~l~~l~-h~~i~~~~~~~~   74 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET-SKEVSA-----LECEIQLLKNLQ-HERIVQYYGCLR   74 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh-HHHHHH-----HHHHHHHHHHcC-CCCeeeEEEEEE
Confidence            3688999999999999999999888999999988754322111 111111     557999999998 999999999873


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .    .....+++++||+++++|.+++..   . ..+++..++.++.|++.|
T Consensus        75 ~----~~~~~~~l~~e~~~~~~L~~~l~~---~-~~l~~~~~~~~~~qi~~~  118 (266)
T cd06651          75 D----RAEKTLTIFMEYMPGGSVKDQLKA---Y-GALTESVTRKYTRQILEG  118 (266)
T ss_pred             c----CCCCEEEEEEeCCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            2    234678999999999999999843   2 248999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=5.1e-15  Score=104.87  Aligned_cols=106  Identities=23%  Similarity=0.306  Sum_probs=81.1

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceeeeeeeecCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~~~~~~~~~~~  105 (152)
                      ||+|+||.||++.+..++..+|+|++.........   +..     ....|..++....  .||+|++++..+      .
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~---~~~-----~~~~e~~~l~~~~~~~~p~i~~~~~~~------~   66 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKK---EVA-----HTIGERNILVRTLLDESPFIVGLKFSF------Q   66 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhh---HHH-----HHHHHHHHHHHhccCCCCcCcceEEEE------e
Confidence            69999999999999889999999998642211111   111     1234555555442  499999999999      7


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|++|||+++|+|.++++.    ...+++..++.++.||++|
T Consensus        67 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qil~a  108 (330)
T cd05586          67 TDSDLYLVTDYMSGGELFWHLQK----EGRFSEDRAKFYIAELVLA  108 (330)
T ss_pred             cCCeEEEEEcCCCCChHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            78899999999999999988842    2359999999999999876

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=2.4e-14  Score=97.98  Aligned_cols=111  Identities=24%  Similarity=0.433  Sum_probs=92.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|++|.||++.+..++..+++|.+......  .....        +.+|+..+..+. |+|++++++.+ 
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~--------~~~e~~~l~~l~-~~~i~~~~~~~-   68 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQ--------LLRELKTLRSCE-SPYVVKCYGAF-   68 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHH--------HHHHHHHHHhcC-CCCeeeEEEEE-
Confidence            3689999999999999999999888999999988754321  11111        457888999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.++++|||+++++|.+++...    ..+++..++.++.|+++|
T Consensus        69 -----~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~  111 (264)
T cd06623          69 -----YKEGEISIVLEYMDGGSLADLLKKV----GKIPEPVLAYIARQILKG  111 (264)
T ss_pred             -----ccCCeEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                 6778999999999999999999532    358999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.62  E-value=7.4e-15  Score=100.41  Aligned_cols=110  Identities=21%  Similarity=0.340  Sum_probs=88.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|++.+.||+|+||.||++.++ .+..+++|.+.........            +.+|+.+++.+. |||++++++.+
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~------------~~~e~~~l~~l~-~~~i~~~~~~~   68 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDD------------FIEEAKVMMKLS-HPNLVQLYGVC   68 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHH------------HHHHHHHHHhCC-CCCEEEEEEEE
Confidence            356889999999999999999875 4567899987643322111            346888899998 99999999988


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++++|.+++...   ...+++..++.++.|++.|
T Consensus        69 ------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~  112 (256)
T cd05059          69 ------TKQRPIFIVTEYMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEA  112 (256)
T ss_pred             ------cCCCceEEEEecCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHH
Confidence                  6778899999999999999998532   2258999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.62  E-value=2.8e-14  Score=99.30  Aligned_cols=113  Identities=21%  Similarity=0.293  Sum_probs=89.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+++|.+...........          +.+|+.+++.+. |+|++++++.
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~----------~~~e~~~l~~l~-h~ni~~~~~~   71 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFT----------AIREASLLKGLK-HANIVLLHDI   71 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHH----------HHHHHHHHHhcC-CCCEeEEEEE
Confidence            34789999999999999999999988899999999864322111111          346888899998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..|++|||+. +++.+++.   .....+++..++.++.|+++|
T Consensus        72 ~------~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~  115 (291)
T cd07870          72 I------HTKETLTFVFEYMH-TDLAQYMI---QHPGGLHPYNVRLFMFQLLRG  115 (291)
T ss_pred             E------ecCCeEEEEEeccc-CCHHHHHH---hCCCCCCHHHHHHHHHHHHHH
Confidence            8      67788999999995 77777763   222357889999999999876

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.62  E-value=2.1e-14  Score=102.97  Aligned_cols=118  Identities=23%  Similarity=0.341  Sum_probs=90.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~ii~~~~   90 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR---------AYRELVLMKCVN-HKNIIGLLN   90 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHH---------HHHHHHHHHhcC-CCCccccce
Confidence            3467899999999999999999999889999999998753322221111         447889999998 999999998


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++...........+|++|||++ ++|.++++.      .+++..+..++.|++.|
T Consensus        91 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~a  138 (364)
T cd07875          91 VFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCG  138 (364)
T ss_pred             eecccccccccCeEEEEEeCCC-CCHHHHHHh------cCCHHHHHHHHHHHHHH
Confidence            8743222123356899999995 577777631      38899999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.62  E-value=1.3e-14  Score=100.90  Aligned_cols=114  Identities=19%  Similarity=0.389  Sum_probs=89.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +|++.+.||+|+||.||.+...   .++..+|+|.+............+       .+..|+.++..+.+|++|+.+++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~-------~~~~e~~~l~~l~~~~~i~~~~~~   73 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTE-------HTRTERQVLEHIRQSPFLVTLHYA   73 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHH-------HHHHHHHHHHhcccCCChhceeeE
Confidence            4889999999999999999874   367889999987532211111111       144788999999669999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      +.....|++|||+++++|.+++..   . ..+++..+..++.|+++|
T Consensus        74 ~------~~~~~~~lv~e~~~~~~L~~~l~~---~-~~l~~~~~~~~~~qi~~a  117 (290)
T cd05613          74 F------QTDTKLHLILDYINGGELFTHLSQ---R-ERFKEQEVQIYSGEIVLA  117 (290)
T ss_pred             e------ecCCeEEEEEecCCCCcHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            8      677889999999999999999853   2 258999999999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.62  E-value=1.4e-14  Score=100.21  Aligned_cols=117  Identities=23%  Similarity=0.380  Sum_probs=91.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..++|++.+.||+|++|.||++.+..     .+..+++|.+.........  .        .+..|+.+++.+. |+||+
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~--~--------~~~~e~~~l~~l~-~~~i~   72 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDE--S--------DFLMEALIMSKFN-HQNIV   72 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHH--H--------HHHHHHHHHHhCC-CCCEe
Confidence            45689999999999999999999876     5667888877543221111  1        1457889999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh---CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+..+++|||+++++|.+++...+.   ....+++..+..++.||+.|
T Consensus        73 ~~~~~~------~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~  128 (277)
T cd05036          73 RLIGVS------FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG  128 (277)
T ss_pred             eEEEEE------ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            999988      567778999999999999999965432   11258999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.62  E-value=1.1e-14  Score=102.04  Aligned_cols=119  Identities=21%  Similarity=0.369  Sum_probs=91.8

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +....++|.+.+.||+|+||.||++...     .++..+|+|.+...... ... .        .+.+|+.+++.+..||
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~-~--------~~~~E~~~l~~l~~h~   99 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS-SER-E--------ALMSELKIMSHLGNHE   99 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh-HHH-H--------HHHHHHHHHHhccCCC
Confidence            3455668999999999999999999752     34457899987643221 111 1        1557999999994499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++.+      ...+..+++|||+.+|+|.++++..  ....+++..+..++.|++.|
T Consensus       100 ~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~  153 (302)
T cd05055         100 NIVNLLGAC------TIGGPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKG  153 (302)
T ss_pred             CcceEEEEE------ecCCceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHH
Confidence            999999998      6778899999999999999998532  22248999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.62  E-value=2.2e-14  Score=99.70  Aligned_cols=119  Identities=22%  Similarity=0.354  Sum_probs=85.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcC-CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVE-TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFYG   96 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~~   96 (152)
                      ++|++.+.||+|+||.||++.+.. .+..+|+|.+............         ..+|+.+++.+.  .||||+++++
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~e~~~l~~l~~~~hpniv~~~~   71 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS---------TIREVAVLRHLETFEHPNVVRLFD   71 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHH---------HHHHHHHHHhhcccCCCCcceEEE
Confidence            368999999999999999999854 4678999988743322111111         234666555542  2999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..... .....++++|||+. ++|.+++.....  ..+++..++.++.|+++|
T Consensus        72 ~~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~a  122 (290)
T cd07862          72 VCTVSRT-DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRG  122 (290)
T ss_pred             EEecccC-CCCCcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHH
Confidence            8743221 24567999999995 689998864322  348999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.62  E-value=9.3e-15  Score=101.25  Aligned_cols=112  Identities=29%  Similarity=0.407  Sum_probs=90.0

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|+.++.||+|++|.||++.+..++..+++|.+...........         .+.+|+.+++.++ |||++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~---------~~~~E~~~l~~l~-h~~i~~~~~~~--   68 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---------TAIREISLLKELN-HPNIVKLLDVI--   68 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccch---------HHHHHHHHHHhcC-CCCCcchhhhc--
Confidence            48899999999999999999988999999998864322111111         1457999999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+. ++|.+++....  +..+++..++.++.|+++|
T Consensus        69 ----~~~~~~~~v~e~~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~  112 (284)
T cd07860          69 ----HTENKLYLVFEFLH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQG  112 (284)
T ss_pred             ----ccCCcEEEEeeccc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHH
Confidence                67888999999995 68888885322  3358999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0660|consensus

Probab=99.62  E-value=3.3e-15  Score=103.47  Aligned_cols=121  Identities=29%  Similarity=0.432  Sum_probs=95.7

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .......|..++.||+|++|.|+.+.++.+|..||+|.+.......-...+         ..+|+.+++.++ |+||+.+
T Consensus        17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akR---------tlRElklLr~~~-HeNIi~l   86 (359)
T KOG0660|consen   17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKR---------TLRELKLLRHLR-HENIIGL   86 (359)
T ss_pred             EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHH---------HHHHHHHHHHhc-CCCcceE
Confidence            344556677789999999999999999999999999988754433222222         458999999999 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+++.+... ..-+.+|+|+|+| +.||...++    .+..+++..+..++.|++.+
T Consensus        87 ~di~~p~~~-~~f~DvYiV~elM-etDL~~iik----~~~~L~d~H~q~f~YQiLrg  137 (359)
T KOG0660|consen   87 LDIFRPPSR-DKFNDVYLVFELM-ETDLHQIIK----SQQDLTDDHAQYFLYQILRG  137 (359)
T ss_pred             Eeecccccc-cccceeEEehhHH-hhHHHHHHH----cCccccHHHHHHHHHHHHHh
Confidence            999976221 3567799999999 568887773    23359999999999999976

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.62  E-value=1.4e-14  Score=101.87  Aligned_cols=122  Identities=20%  Similarity=0.385  Sum_probs=92.7

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+..+.++|.+.+.||+|+||.||++....       ....+|+|.+..... ......         +..|+.++..+.
T Consensus         6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~---------~~~E~~~l~~l~   75 (314)
T cd05099           6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLAD---------LISEMELMKLIG   75 (314)
T ss_pred             cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHH---------HHHHHHHHHhcc
Confidence            345677899999999999999999997532       234688888764322 111111         457888998885


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++++      ...+..|++|||+++|+|.+++.....            ....+++..+..++.|++.|
T Consensus        76 ~h~~iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  146 (314)
T cd05099          76 KHKNIINLLGVC------TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARG  146 (314)
T ss_pred             CCCCeeeEEEEE------ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHH
Confidence            599999999998      667789999999999999999965321            12358889999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.62  E-value=6.1e-15  Score=101.95  Aligned_cols=111  Identities=36%  Similarity=0.571  Sum_probs=90.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ...|+..+.||+|+||.||.+.+..++..+|+|.+...... ....         .+.+|+.+++.+. |||++++++.+
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~---------~~~~e~~~l~~l~-h~~i~~~~~~~   71 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIE---------DIQQEITVLSQCD-SPYVTKYYGSY   71 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-HHHH---------HHHHHHHHHHhCC-CCCEeeEEEEE
Confidence            45688889999999999999998888999999988743211 1111         1557899999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++|+|.++++   .  ..+++..+..++.|++.|
T Consensus        72 ------~~~~~~~lv~e~~~~~~L~~~i~---~--~~l~~~~~~~~~~~l~~~  113 (277)
T cd06640          72 ------LKGTKLWIIMEYLGGGSALDLLR---A--GPFDEFQIATMLKEILKG  113 (277)
T ss_pred             ------EECCEEEEEEecCCCCcHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence                  67889999999999999999884   2  248999999999998865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.61  E-value=1.3e-14  Score=103.77  Aligned_cols=118  Identities=24%  Similarity=0.354  Sum_probs=90.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. ||||+++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~niv~~~~   83 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR---------AYRELVLMKCVN-HKNIISLLN   83 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHH---------HHHHHHHHHHhC-CCchhceee
Confidence            4567999999999999999999999888999999988653322221111         447889999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++............|++|||++ +++.+.++.      .+++..+..++.|+++|
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~qi~~a  131 (355)
T cd07874          84 VFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCG  131 (355)
T ss_pred             eeeccccccccceeEEEhhhhc-ccHHHHHhh------cCCHHHHHHHHHHHHHH
Confidence            8854322123356899999996 466666631      38899999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.61  E-value=1.3e-14  Score=102.18  Aligned_cols=113  Identities=19%  Similarity=0.340  Sum_probs=87.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...+|++.+.||+|+||.||++.+..++.    .+|+|.+.....  ......        +..|+.+++.+. ||||++
T Consensus         5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~--------~~~e~~~l~~l~-h~niv~   73 (316)
T cd05108           5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKE--------ILDEAYVMASVD-NPHVCR   73 (316)
T ss_pred             chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC--HHHHHH--------HHHHHHHHHhCC-CCCCCe
Confidence            34679999999999999999998765554    388888764221  111111        457889999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      .. +..++++||+++|+|.+++..   ....+++..++.++.||+.|
T Consensus        74 ~~g~~------~~-~~~~~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~  121 (316)
T cd05108          74 LLGIC------LT-STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKG  121 (316)
T ss_pred             EEEEE------cC-CCceeeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHH
Confidence            99988      33 457899999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.61  E-value=2e-14  Score=99.73  Aligned_cols=117  Identities=22%  Similarity=0.302  Sum_probs=85.4

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc---CCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL---SVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~i~~l~~~   97 (152)
                      +|++.+.||+|+||.||++.++.+++.+|+|.++...........         ..+|+.+++.+   . ||||++++++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------~~~e~~~l~~l~~~~-h~ni~~~~~~   70 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLS---------TVREVALLKRLEAFD-HPNIVRLMDV   70 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchH---------HHHHHHHHHHhhhcC-CCCeeeeeee
Confidence            488999999999999999999999999999998743222111111         22455555544   5 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..... .....++++|||+. ++|.+++....  ...+++..++.++.|++.|
T Consensus        71 ~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~a  120 (288)
T cd07863          71 CATSRT-DRETKVTLVFEHVD-QDLRTYLDKVP--PPGLPAETIKDLMRQFLRG  120 (288)
T ss_pred             eccccC-CCCceEEEEEcccc-cCHHHHHHhcC--CCCCCHHHHHHHHHHHHHH
Confidence            743211 23466899999996 58888885422  2348999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.61  E-value=1.8e-14  Score=98.32  Aligned_cols=112  Identities=30%  Similarity=0.529  Sum_probs=90.0

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch--hhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI--EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      +|+..+.||+|++|.||++....++..+++|.+.......  ++....        +.+|+.+++.+. |+|++++++.+
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~--------~~~e~~~l~~~~-h~~i~~~~~~~   71 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQ--------LEQEIALLSKLQ-HPNIVQYLGTE   71 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHH--------HHHHHHHHHhcC-CCCchheeeeE
Confidence            3677889999999999999988789999999987533211  111111        457999999998 99999999988


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            .....+++++||+++++|.++++..    ..+++..+..++.|+++|
T Consensus        72 ------~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~  114 (258)
T cd06632          72 ------REEDNLYIFLELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLG  114 (258)
T ss_pred             ------ecCCeEEEEEEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                  6778899999999999999998532    248999999999998875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.61  E-value=1.8e-14  Score=99.69  Aligned_cols=113  Identities=19%  Similarity=0.355  Sum_probs=89.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...+|++.+.||+|+||.||++....++.    .+++|.+.....  .....        .+.+|+.+++.+. |||+++
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~--------~~~~e~~~l~~l~-h~~i~~   73 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANK--------EILDEAYVMASVD-HPHVVR   73 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHH--------HHHHHHHHHHhCC-CCCcce
Confidence            45689999999999999999998766554    478887764322  11111        1457999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      .. ...+++|||+++|+|.+++..   ....+++..+..++.|++.|
T Consensus        74 ~~~~~------~~-~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~  121 (279)
T cd05057          74 LLGIC------LS-SQVQLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKG  121 (279)
T ss_pred             EEEEE------ec-CceEEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence            99988      34 679999999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0574|consensus

Probab=99.61  E-value=5.9e-17  Score=110.65  Aligned_cols=111  Identities=32%  Similarity=0.560  Sum_probs=91.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.+-|.+++.||+|+||.||++.++.+|..+|+|.++...     ..++        +.+|+.+|++.. .|+||++|+
T Consensus        30 ~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQE--------IIKEISIMQQC~-S~yVVKYYG   95 (502)
T KOG0574|consen   30 PPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQE--------IIKEISIMQQCK-SKYVVKYYG   95 (502)
T ss_pred             ChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHH--------HHHHHHHHHHcC-Cchhhhhhh
Confidence            44556889999999999999999999999999999886432     2233        236999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      .+      -....+|+|||||.-|++.|.++.   ++..|+++.+.-+++..++
T Consensus        96 SY------FK~sDLWIVMEYCGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLK  140 (502)
T KOG0574|consen   96 SY------FKHSDLWIVMEYCGAGSISDIMRA---RRKPLSEQEISAVLRDTLK  140 (502)
T ss_pred             hh------ccCCceEeehhhcCCCcHHHHHHH---hcCCccHHHHHHHHHHHHh
Confidence            98      567779999999999999999953   3347999999888776553

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.61  E-value=6.3e-15  Score=100.89  Aligned_cols=118  Identities=26%  Similarity=0.476  Sum_probs=89.4

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|.+.+.||+|+||.||++.+...+...++|.++............      ..+..|+.++..++ |||++++++.+  
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~l~~l~-h~~i~~~~~~~--   71 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNET------VQANQEAQLLSKLD-HPAIVKFHASF--   71 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchH------HHHHHHHHHHHhCC-CCcHHHHHHHH--
Confidence            4889999999999999999987766666666654322111000000      01346888899998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......++++||+++++|.+++......+..+++..++.++.|+++|
T Consensus        72 ----~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  118 (260)
T cd08222          72 ----LERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLG  118 (260)
T ss_pred             ----hcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHH
Confidence                66778999999999999999987654444569999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0196|consensus

Probab=99.61  E-value=3.2e-15  Score=112.50  Aligned_cols=115  Identities=22%  Similarity=0.335  Sum_probs=93.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      .......++.++||.|.||.|+++..+..++   .||+|.++..-  .++...+        |+.|+.+|.+.. ||||+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrd--------FL~EAsIMGQFd-HPNII  693 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRD--------FLSEASIMGQFD-HPNII  693 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhh--------hhhhhhhcccCC-CCcEE
Confidence            3455678999999999999999999876554   58999987532  2222222        778999999999 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +|.++.      .....+.|++|||++|+|..+|+.   +...|+.-++..+++.|+.
T Consensus       694 rLEGVV------Tks~PvMIiTEyMENGsLDsFLR~---~DGqftviQLVgMLrGIAs  742 (996)
T KOG0196|consen  694 RLEGVV------TKSKPVMIITEYMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIAS  742 (996)
T ss_pred             EEEEEE------ecCceeEEEhhhhhCCcHHHHHhh---cCCceEeehHHHHHHHHHH
Confidence            999999      788889999999999999999953   3335999999888888875

>KOG0696|consensus

Probab=99.61  E-value=2.3e-16  Score=111.73  Aligned_cols=118  Identities=24%  Similarity=0.295  Sum_probs=92.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .....+|..+.+||+|+||+|.++..+.+.+.||+|++++...-+..... .       ...|..++.-....|.+++++
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDve-c-------tm~EKrvLAL~~kppFL~qlH  416 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVE-C-------TMVEKRVLALPGKPPFLVQLH  416 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCccc-c-------eehhhhheecCCCCchHHHHH
Confidence            44456799999999999999999999899999999998865322211111 0       224666666655579999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+|      ++-+.+|+||||+.||+|...++...+    +-++.+.+|++.|+.+
T Consensus       417 ScF------QTmDRLyFVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaig  462 (683)
T KOG0696|consen  417 SCF------QTMDRLYFVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIG  462 (683)
T ss_pred             HHh------hhhhheeeEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHH
Confidence            999      899999999999999999999976543    8888999998888754

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.61  E-value=1.4e-14  Score=100.68  Aligned_cols=117  Identities=20%  Similarity=0.380  Sum_probs=90.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +.++|++...||+|+||.||++.+..     ++..+|+|.+.....  ......        +.+|+.++..+. |||++
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~--------~~~ei~~l~~l~-h~~iv   71 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQAD--------FQREAALMAEFD-HPNIV   71 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHH--------HHHHHHHHHhcC-CCchh
Confidence            45789999999999999999998642     567789998864322  111111        457899999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ......++++||+++|+|.+++.....                  ....+++..++.++.|++.|
T Consensus        72 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~a  142 (288)
T cd05050          72 KLLGVC------AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAG  142 (288)
T ss_pred             eEEEEE------cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHH
Confidence            999998      677889999999999999999964221                  11247888999999999876

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.61  E-value=1.6e-14  Score=99.33  Aligned_cols=120  Identities=24%  Similarity=0.433  Sum_probs=90.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcC-CCCeEEEEEeecCCCchh----hHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVE-TGDHVAIKIMENIPENIE----EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~-~~~~~a~K~i~~~~~~~~----~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      +|++.+.||+|+||.||++.+.. .+..+|+|.+........    .......     .+..|+.++.+...|||+++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~l~~~~~h~~i~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIG-----DIVSEVTIIKEQLRHPNIVRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHH-----HHHHHHHHHhhcCCCCCeeeEE
Confidence            47888999999999999999877 577899998864321110    0111111     1346777776533399999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...++.+++|||+++++|.+++.........+++..++.++.|++.+
T Consensus        76 ~~~------~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  125 (269)
T cd08528          76 KTF------LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLA  125 (269)
T ss_pred             eeE------ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence            998      67889999999999999999987655555579999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.61  E-value=8e-15  Score=100.52  Aligned_cols=112  Identities=21%  Similarity=0.348  Sum_probs=92.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|++|.||++.+..+++.+++|.+......  .....        +.+|+.+++.+. |||++++++.+ 
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~--------~~~e~~~l~~~~-~~~i~~~~~~~-   68 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQ--------ILRELDILHKCN-SPYIVGFYGAF-   68 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHH--------HHHHHHHHHHCC-CCchhhhheee-
Confidence            3678889999999999999999888999999998754322  11111        457899999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+++++||+++++|.+++....   ..+++..+..++.|+++|
T Consensus        69 -----~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~  112 (265)
T cd06605          69 -----YNNGDISICMEYMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKG  112 (265)
T ss_pred             -----ecCCEEEEEEEecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHH
Confidence                 67789999999999999999986432   368999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.61  E-value=2.6e-14  Score=100.40  Aligned_cols=117  Identities=23%  Similarity=0.439  Sum_probs=89.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .|.+.+.||+|+||.||++.+..  ++..+|+|.+.............        ..+|+.++..++ |||++++++.+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~   71 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQS--------ACREIALLRELK-HENVVSLVEVF   71 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHH--------HHHHHHHHHhcC-CCCccceEEEE
Confidence            47899999999999999999887  78999999987643211111111        346889999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCC-CCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG-VSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~l~~~~~~~~~~qi~~a  151 (152)
                      ..    .....+++||||++ +++.+++....... ..+++..++.++.|++.|
T Consensus        72 ~~----~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  120 (316)
T cd07842          72 LE----HADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNG  120 (316)
T ss_pred             eC----CCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHH
Confidence            32    22378999999995 57888776544332 268999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.61  E-value=4.9e-14  Score=98.49  Aligned_cols=114  Identities=39%  Similarity=0.594  Sum_probs=93.4

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...+..+|++.+.||.|++|.||++.+..+++.+++|.+..........           +.+|+.+++.+. |||++++
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~-----------~~~e~~~l~~l~-h~~iv~~   81 (296)
T cd06655          14 IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKEL-----------IINEILVMKELK-NPNIVNF   81 (296)
T ss_pred             cCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHH-----------HHHHHHHHHhcC-CCceeee
Confidence            3445678999999999999999999988899999999886432211111           447888899998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+..|+++||+++++|.+++..     ..+++..+..++.|++.|
T Consensus        82 ~~~~------~~~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~a  127 (296)
T cd06655          82 LDSF------LVGDELFVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQA  127 (296)
T ss_pred             eeeE------ecCceEEEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHH
Confidence            9998      677889999999999999998842     248999999999998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.61  E-value=4e-14  Score=99.38  Aligned_cols=117  Identities=29%  Similarity=0.436  Sum_probs=91.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+............         ..+|+.+++.+. |+|++++++
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~i~~~~~   73 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPIS---------SLREITLLLNLR-HPNIVELKE   73 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcch---------hhHHHHHHHhCC-CCCCcceEE
Confidence            3567899999999999999999999889999999998743222111111         346889999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+..    ...+.++++|||++ ++|.+++....   ..+++..++.++.|+++|
T Consensus        74 ~~~~----~~~~~~~lv~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~  120 (309)
T cd07845          74 VVVG----KHLDSIFLVMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRG  120 (309)
T ss_pred             EEec----CCCCeEEEEEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHH
Confidence            8842    23356899999995 58888885422   358999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.61  E-value=1.7e-14  Score=99.75  Aligned_cols=107  Identities=21%  Similarity=0.267  Sum_probs=85.6

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||++.+..+++.+++|.+............        .+..|+.+++.++ |||++++++.+      ...
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-~~~i~~~~~~~------~~~   65 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQ--------MALNEKKILEKVS-SRFIVSLAYAF------ETK   65 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhH--------HHHHHHHHHHhCC-CCCEeeeeeEE------ecC
Confidence            68999999999998888999999998753221111111        1447899999998 99999999998      678


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..|++|||+++++|.+++.....  ..+++..++.++.|++.|
T Consensus        66 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~ql~~~  107 (277)
T cd05577          66 DDLCLVMTLMNGGDLKYHIYNVGE--PGFPEARAIFYAAQIICG  107 (277)
T ss_pred             CeEEEEEecCCCCcHHHHHHHcCc--CCCCHHHHHHHHHHHHHH
Confidence            889999999999999999854222  358999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.60  E-value=9.7e-15  Score=101.11  Aligned_cols=117  Identities=23%  Similarity=0.390  Sum_probs=90.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCC-----CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETG-----DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +.++|++.+.||+|+||.||++.....+     ..+++|.+.....  .....        .+.+|+.++..+. |||++
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~--~~~~~--------~~~~ei~~l~~l~-h~~i~   71 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQ--------EFRQEAELMSDLQ-HPNIV   71 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC--HHHHH--------HHHHHHHHHHhcC-Ccccc
Confidence            3458999999999999999999875544     5688888764321  11111        1457999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------------CCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ......+++|||+++|+|.+++......            ...+++..++.++.|++.|
T Consensus        72 ~~~~~~------~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~a  136 (283)
T cd05048          72 CLLGVC------TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAG  136 (283)
T ss_pred             eEEEEE------cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHH
Confidence            999998      6778899999999999999999643211            1358899999999999876

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.60  E-value=1.1e-14  Score=101.66  Aligned_cols=117  Identities=22%  Similarity=0.361  Sum_probs=89.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCC--------------CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHh
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVET--------------GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK   83 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~--------------~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~   83 (152)
                      +..+|.+.+.||+|+||.||++.+...              ...+|+|.+..... .. ...        .+.+|+.++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~-~~~--------~~~~ei~~l~   72 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KT-ARN--------DFLKEIKIMS   72 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HH-HHH--------HHHHHHHHHH
Confidence            456899999999999999999976432              22488998864321 11 111        1557999999


Q ss_pred             ccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--------CCCCCCHHHHHHHHHhhhcc
Q psy2812          84 DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        84 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+. |||++++++.+      ...+..+++|||+++++|.+++.....        ....+++..+..++.|++.|
T Consensus        73 ~l~-h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  141 (295)
T cd05097          73 RLK-NPNIIRLLGVC------VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASG  141 (295)
T ss_pred             hCC-CCCcCeEEEEE------cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHH
Confidence            998 99999999999      677889999999999999999854211        11236888999999999876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0594|consensus

Probab=99.60  E-value=1.8e-15  Score=104.54  Aligned_cols=122  Identities=25%  Similarity=0.310  Sum_probs=94.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC-cceeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN-IPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-i~~l~~~   97 (152)
                      ...|..++.||+|+||.||+|+.+.+|+.||+|.++..........         ...+|+.+++.+. |+| |+.++++
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~---------taiREisllk~L~-~~~~iv~L~dv   79 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPS---------TAIREISLLKRLS-HANHIVRLHDV   79 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCc---------hhhHHHHHHHHhC-CCcceEEEEee
Confidence            4567788889999999999999999999999999986543211111         1458999999998 998 9999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +...+.....+.+++++||+ .-+|.+++.........++...++.++.||+.+
T Consensus        80 ~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g  132 (323)
T KOG0594|consen   80 IHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG  132 (323)
T ss_pred             eeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHH
Confidence            95422112234899999999 568999997655432358889999999999876

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.60  E-value=2.2e-14  Score=100.11  Aligned_cols=113  Identities=42%  Similarity=0.612  Sum_probs=92.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|.+.+.||+|+||.||++.+..++..+++|.+........  ..         +.+|+.+++.+. |||+++++
T Consensus        15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~--~~---------~~~e~~~l~~l~-hp~i~~~~   82 (293)
T cd06647          15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK--EL---------IINEILVMRENK-HPNIVNYL   82 (293)
T ss_pred             cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH--HH---------HHHHHHHHhhcC-CCCeeehh
Confidence            4456789999999999999999999888889999998864322111  11         447888899998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..|+++||+++++|.+++..   .  .+++..+..++.|++.|
T Consensus        83 ~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~--~l~~~~~~~i~~~l~~a  127 (293)
T cd06647          83 DSY------LVGDELWVVMEYLAGGSLTDVVTE---T--CMDEGQIAAVCRECLQA  127 (293)
T ss_pred             hee------eeCCcEEEEEecCCCCcHHHHHhh---c--CCCHHHHHHHHHHHHHH
Confidence            998      567789999999999999998842   2  47899999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.60  E-value=1.4e-14  Score=99.85  Aligned_cols=117  Identities=23%  Similarity=0.412  Sum_probs=90.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..++|++...||+|+||.||++..+..     ...+++|.+.....  ......        +.+|+.+++.+. |||++
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~--------~~~E~~~l~~l~-h~~iv   71 (275)
T cd05046           3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD--ENLQSE--------FRRELDMFRKLS-HKNVV   71 (275)
T ss_pred             ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc--hHHHHH--------HHHHHHHHHhcC-Cccee
Confidence            347899999999999999999986533     34678887653221  111111        447999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-----CCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-----GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+..+++|||+++|+|.+++......     ...+++..+..++.|++.|
T Consensus        72 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~  129 (275)
T cd05046          72 RLLGLC------REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALG  129 (275)
T ss_pred             eeEEEE------CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHH
Confidence            999988      6678899999999999999999643311     1158999999999999876

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.60  E-value=1.2e-14  Score=104.14  Aligned_cols=105  Identities=17%  Similarity=0.197  Sum_probs=87.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|.+++.||+|+||.||++.+..++..+|+|......                 ...|+.+++.++ ||||+++++.+
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-----------------~~~E~~~l~~l~-h~~iv~~~~~~  126 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-----------------TLIEAMLLQNVN-HPSVIRMKDTL  126 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-----------------cHHHHHHHHhCC-CCCCcChhheE
Confidence            346999999999999999999998888899999754321                 235888899998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++||++ .++|.+++..   ....+++..++.++.||+.|
T Consensus       127 ------~~~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~a  169 (357)
T PHA03209        127 ------VSGAITCMVLPHY-SSDLYTYLTK---RSRPLPIDQALIIEKQILEG  169 (357)
T ss_pred             ------EeCCeeEEEEEcc-CCcHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence                  6778899999999 5688888742   23369999999999999886

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.60  E-value=2.4e-14  Score=98.06  Aligned_cols=113  Identities=22%  Similarity=0.362  Sum_probs=89.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.++|++.+.||+|+||.||++... .+..+++|.+......   ..         .+.+|+.+++.+. |+|+++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~---~~---------~~~~e~~~l~~l~-~~~i~~~~   67 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMS---VE---------AFLAEANVMKTLQ-HDKLVKLH   67 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhH---HH---------HHHHHHHHHHhcC-CCCcceEE
Confidence            457789999999999999999999753 4556899887642111   11         1457899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      .. ...+++|||+++++|.++++..  .+..+++..+..++.|++.|
T Consensus        68 ~~~------~~-~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~a  114 (260)
T cd05073          68 AVV------TK-EPIYIITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEG  114 (260)
T ss_pred             EEE------cC-CCeEEEEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHH
Confidence            988      44 6789999999999999999642  23357888999999999876

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.60  E-value=6.2e-15  Score=104.83  Aligned_cols=99  Identities=22%  Similarity=0.422  Sum_probs=76.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      |..+.++|++.+.||+|+||.||++....     +++.+|+|.++.... ......         +..|+.++..+..|+
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~---------~~~E~~~~~~l~~h~   71 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKA---------LMTELKILIHIGHHL   71 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHH---------HHHHHHHHHhhccCc
Confidence            45677899999999999999999996432     356899998864321 111111         457889999984499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      ||+++++.+.     .....++++|||+++|+|.+++..
T Consensus        72 niv~~~~~~~-----~~~~~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          72 NVVNLLGACT-----KPGGPLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             chhheeeeEe-----cCCCCEEEEEecCCCCCHHHHHHh
Confidence            9999999874     345679999999999999999854

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0662|consensus

Probab=99.60  E-value=1.5e-15  Score=97.00  Aligned_cols=110  Identities=25%  Similarity=0.382  Sum_probs=90.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|+-.+.||+|.+|.|++++.+.+++.+|+|.++........-..         ..+|+.+++.+. |.||+++++..  
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpss---------alreicllkelk-hknivrl~dvl--   70 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSS---------ALREICLLKELK-HKNIVRLHDVL--   70 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHH---------HHHHHHHHHHhh-hcceeehhhhh--
Confidence            566778999999999999999999999999999865433322222         568999999999 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                          .++..+-+|+||| ..+|..+..   ..+..++...++.++.|+++
T Consensus        71 ----hsdkkltlvfe~c-dqdlkkyfd---slng~~d~~~~rsfmlqllr  112 (292)
T KOG0662|consen   71 ----HSDKKLTLVFEFC-DQDLKKYFD---SLNGDLDPEIVRSFMLQLLR  112 (292)
T ss_pred             ----ccCceeEEeHHHh-hHHHHHHHH---hcCCcCCHHHHHHHHHHHHh
Confidence                7889999999999 457777764   44457999999999999875

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.1e-14  Score=100.49  Aligned_cols=110  Identities=39%  Similarity=0.669  Sum_probs=90.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||.|++|.||++.+..++..+++|.+...... .....         +.+|+.+++.+. |+|++++.+.+ 
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~-   68 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE-DEIED---------IQQEIQFLSQCR-SPYITKYYGSF-   68 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc-hHHHH---------HHHHHHHHHHcC-CCCeeeeeEEE-
Confidence            3688889999999999999999888999999998643211 11111         457889999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           .....+|+++||+++++|.+++..   .  .+++..++.++.|++.|
T Consensus        69 -----~~~~~~~~v~e~~~~~~L~~~~~~---~--~~~~~~~~~~~~ql~~~  110 (274)
T cd06609          69 -----LKGSKLWIIMEYCGGGSCLDLLKP---G--KLDETYIAFILREVLLG  110 (274)
T ss_pred             -----EECCeEEEEEEeeCCCcHHHHHhh---c--CCCHHHHHHHHHHHHHH
Confidence                 566889999999999999999853   1  58999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.60  E-value=1.4e-14  Score=98.83  Aligned_cols=111  Identities=41%  Similarity=0.683  Sum_probs=92.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +.++|++.+.||+|+||.||++....++..+++|.++....     ..        .+.+|+.+++.+. |||++++++.
T Consensus         1 ~~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~--------~~~~e~~~~~~l~-~~~i~~~~~~   66 (256)
T cd06612           1 PEEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQ--------EIIKEISILKQCD-SPYIVKYYGS   66 (256)
T ss_pred             CcccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HH--------HHHHHHHHHHhCC-CCcEeeeeee
Confidence            35789999999999999999999888889999998864211     11        1557899999997 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......|+++||+++++|.+++..   .+..+++..++.++.|+++|
T Consensus        67 ~------~~~~~~~l~~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~  111 (256)
T cd06612          67 Y------FKNTDLWIVMEYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKG  111 (256)
T ss_pred             e------ecCCcEEEEEecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHH
Confidence            9      677889999999999999999853   22358999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.60  E-value=2.8e-14  Score=99.37  Aligned_cols=113  Identities=26%  Similarity=0.351  Sum_probs=89.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|++|.||++.+..+++.+++|.+............         +.+|+.+++.+. |||++++++.+ 
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~-   70 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPST---------AIREISLLKEMQ-HGNIVRLQDVV-   70 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHH---------HHHHHHHHHhcc-CCCEeeEEEEE-
Confidence            5799999999999999999999888999999988643221111111         447889999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ......|++|||++ ++|.+++...  ....+++..++.++.||+.|
T Consensus        71 -----~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~a  114 (294)
T PLN00009         71 -----HSEKRLYLVFEYLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRG  114 (294)
T ss_pred             -----ecCCeEEEEEeccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHH
Confidence                 67789999999995 5888877432  22246888999999999876

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.60  E-value=1.5e-14  Score=99.01  Aligned_cols=113  Identities=23%  Similarity=0.380  Sum_probs=89.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.++|++.+.||+|+||.||++... .+..+++|.+.......+.            +.+|+.+++.+. |+++++++
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~------------~~~E~~~l~~l~-~~~i~~~~   67 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPES------------FLEEAQIMKKLR-HDKLVQLY   67 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHH------------HHHHHHHHHhcC-CCceEEEE
Confidence            456678999999999999999999764 5567899988753322111            457899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      . .+..+++|||+++++|.+++...  ....+++..++.++.|++.|
T Consensus        68 ~~~------~-~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~a  114 (260)
T cd05070          68 AVV------S-EEPIYIVTEYMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAG  114 (260)
T ss_pred             eEE------C-CCCcEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHH
Confidence            877      3 35589999999999999998532  22358999999999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.60  E-value=1.6e-14  Score=100.25  Aligned_cols=114  Identities=20%  Similarity=0.306  Sum_probs=87.8

Q ss_pred             CceEEEEEeeccceeEEEEEEE----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKD----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..|++++.||+|+||.||++..    ..++..+++|.+.....  ......        +.+|+.+++.+. |||++++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~--------~~~e~~~l~~l~-h~~i~~~~   72 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIAD--------LKKEIEILRNLY-HENIVKYK   72 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc--HHHHHH--------HHHHHHHHHhCC-CCCeeeee
Confidence            4578999999999999999974    34577899998864321  111111        558999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+..    ......+++|||++|++|.+++..   ....+++..+..++.|++.|
T Consensus        73 ~~~~~----~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~a  121 (284)
T cd05079          73 GICTE----DGGNGIKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKG  121 (284)
T ss_pred             eEEec----CCCCceEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence            98732    224678999999999999999853   22258999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.60  E-value=1.7e-14  Score=100.07  Aligned_cols=112  Identities=25%  Similarity=0.423  Sum_probs=88.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+++|.+........ ...        .+.+|+.+++.+. |+||+++++.+ 
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~-~~~--------~~~~e~~~l~~l~-~~~i~~~~~~~-   69 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDED-VKK--------TALREVKVLRQLR-HENIVNLKEAF-   69 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccccc-chh--------HHHHHHHHHHhcC-CCCeeehhheE-
Confidence            369999999999999999999988899999998864322111 111        1457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++|||++++.+..+..   . ...+++..+..++.|++.|
T Consensus        70 -----~~~~~~~iv~e~~~~~~l~~~~~---~-~~~~~~~~~~~~~~~i~~~  112 (288)
T cd07833          70 -----RRKGRLYLVFEYVERTLLELLEA---S-PGGLPPDAVRSYIWQLLQA  112 (288)
T ss_pred             -----EECCEEEEEEecCCCCHHHHHHh---c-CCCCCHHHHHHHHHHHHHH
Confidence                 56788999999998766655442   2 2358999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.60  E-value=2.7e-14  Score=99.02  Aligned_cols=117  Identities=21%  Similarity=0.358  Sum_probs=89.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEc----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDV----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      +.++|++.+.||+|+||.||++...    ..+..+++|.+..... ... ...        +.+|+.+++.+. |||+++
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~-~~~--------~~~E~~~l~~l~-h~niv~   71 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQ-WGE--------FQQEASLMAELH-HPNIVC   71 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHH-HHH--------HHHHHHHHhhCC-CCCeee
Confidence            3468999999999999999999853    3456789998864221 111 111        457999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ......|++|||+++++|.+++.....             .+..+++..+..++.|++.|
T Consensus        72 ~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  136 (283)
T cd05090          72 LLGVV------TQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG  136 (283)
T ss_pred             EEEEE------ecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            99998      677889999999999999999853211             11247888999999999876

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.60  E-value=2.4e-14  Score=101.61  Aligned_cols=122  Identities=18%  Similarity=0.360  Sum_probs=91.3

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC-------CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET-------GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-------~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+.....+|++.+.||+|+||.||++.+...       ...+|+|.+..... ......         +.+|+.++.++.
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~---------~~~E~~~l~~l~   75 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSD---------LVSEMEMMKMIG   75 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHH---------HHHHHHHHHhhc
Confidence            3455566899999999999999999986432       22588887764221 111111         457899999994


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++.+      ...+.+++++||+++|+|.+++.....            ....++...+..++.|++.|
T Consensus        76 ~h~~iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  146 (334)
T cd05100          76 KHKNIINLLGAC------TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARG  146 (334)
T ss_pred             CCCCeeeeeEEE------ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHH
Confidence            499999999999      667789999999999999999964321            12247888889999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.60  E-value=1.9e-14  Score=100.29  Aligned_cols=117  Identities=26%  Similarity=0.402  Sum_probs=90.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCC----------------CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETG----------------DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV   81 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~----------------~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~   81 (152)
                      ..++|.+++.||+|+||.||++.+...+                ..+|+|.+......  .....        +.+|+.+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~--------~~~e~~~   72 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NARED--------FLKEVKI   72 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHH--------HHHHHHH
Confidence            4568999999999999999998865433                34788887643221  11111        4579999


Q ss_pred             HhccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-------CCCCCCHHHHHHHHHhhhcc
Q psy2812          82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        82 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..+. |||++++++.+      ...+..+++||++++++|.+++.....       ....+++..++.++.|+++|
T Consensus        73 l~~l~-~~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a  142 (296)
T cd05051          73 LSRLS-DPNIARLLGVC------TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG  142 (296)
T ss_pred             HHhcC-CCCEeEEEEEE------ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence            99998 99999999998      667889999999999999999965331       11258999999999999876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.59  E-value=4.6e-14  Score=98.82  Aligned_cols=121  Identities=21%  Similarity=0.316  Sum_probs=90.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. |||++++++
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~iv~~~~   78 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPIT---------ALREIKILQLLK-HENVVNLIE   78 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhH---------HHHHHHHHHhCC-CCCccceEE
Confidence            3456899999999999999999999889999999988643221111111         346889999998 999999999


Q ss_pred             eeeecCC--CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGG--QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.....  .......+++|||+. ++|.+++..   .+..+++..++.++.|+++|
T Consensus        79 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~a  131 (310)
T cd07865          79 ICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSN---KNVKFTLSEIKKVMKMLLNG  131 (310)
T ss_pred             EEecccccccCCCceEEEEEcCCC-cCHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            8743210  012345799999995 578777742   22358999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=6.6e-14  Score=95.22  Aligned_cols=111  Identities=32%  Similarity=0.564  Sum_probs=91.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|++|.||++.+..++..+++|.+............         +.+|+.++..+. ||+++++++.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~--   68 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKS---------IMQEIDLLKNLK-HPNIVKYIGSI--   68 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHH---------HHHHHHHHHhCC-CCCccEEEEEE--
Confidence            488999999999999999998888899999998754332111111         557999999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        69 ----~~~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~  111 (254)
T cd06627          69 ----ETSDSLYIILEYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQG  111 (254)
T ss_pred             ----EeCCEEEEEEecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHH
Confidence                5678899999999999999998532    258999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.59  E-value=2.8e-14  Score=97.44  Aligned_cols=111  Identities=23%  Similarity=0.375  Sum_probs=90.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++..  .++.+++|.+.....   ...         .+.+|+.++..+. |+|++++++.
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---~~~---------~~~~e~~~l~~l~-~~~i~~~~~~   68 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---AAQ---------AFLAEASVMTTLR-HPNLVQLLGV   68 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh---HHH---------HHHHHHHHHHhcC-CcceeeeEEE
Confidence            456899999999999999999975  478899998875322   111         1457889999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.++++...  ...+++..++.++.|++.|
T Consensus        69 ~------~~~~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~  114 (256)
T cd05039          69 V------LQGNPLYIVTEYMAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEG  114 (256)
T ss_pred             E------cCCCCeEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHH
Confidence            8      66788999999999999999985322  2258999999999999876

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.59  E-value=1.4e-14  Score=102.59  Aligned_cols=108  Identities=25%  Similarity=0.424  Sum_probs=86.6

Q ss_pred             EEeecc--ceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          26 ELIGEG--TYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        26 ~~lg~G--~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      +.||+|  +||.||++.+..+++.+|+|++.......+...    .     +.+|+.+++.++ ||||+++++++     
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~----~-----~~~e~~~~~~l~-h~niv~~~~~~-----   68 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLK----A-----LQNEVVLSHFFR-HPNIMTSWTVF-----   68 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHH----H-----HHHHHHHHHhCC-CCCcceEeeeE-----
Confidence            356666  899999999988999999999875433322211    1     557888888888 99999999999     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ...+..++++||+.+++|.++++....  ..+++..+..++.|++.|
T Consensus        69 -~~~~~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~a  113 (328)
T cd08226          69 -TTGSWLWVISPFMAYGSANSLLKTYFP--EGMSEALIGNILFGALRG  113 (328)
T ss_pred             -ecCCceEEEEecccCCCHHHHHHhhcc--cCCCHHHHHHHHHHHHHH
Confidence             678889999999999999999865432  248999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.59  E-value=8.8e-15  Score=101.10  Aligned_cols=116  Identities=24%  Similarity=0.407  Sum_probs=90.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .++|.+.+.||+|+||.||++....     ++..+|+|.+......  +....        +.+|+.++..+. |||+++
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~--------~~~e~~~l~~l~-~~~i~~   72 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKD--------FEREAELLTNFQ-HENIVK   72 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHH--------HHHHHHHHHhcC-CCCchh
Confidence            4578899999999999999998643     3567999988643221  11111        557999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh----------CCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK----------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ......+++|||+++++|.++++....          ....+++..+..++.|++.|
T Consensus        73 ~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~  134 (280)
T cd05049          73 FYGVC------TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASG  134 (280)
T ss_pred             eeeEE------ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHH
Confidence            99999      667889999999999999999964321          12347899999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG1152|consensus

Probab=99.59  E-value=5.2e-15  Score=108.30  Aligned_cols=121  Identities=20%  Similarity=0.289  Sum_probs=95.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFY   95 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~   95 (152)
                      ...+|..++.||+|+||+|++|.++..+..|++|.|.+.+.-...+.+....-+   ...|+.+|..++  +|+||++++
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGt---Vp~EIqIla~l~~~sH~NIlKlL  635 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGT---VPSEIQILATLNKHSHENILKLL  635 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCc---cchhHHHHHHhhhcCccchhhhh
Confidence            345699999999999999999999999889999999865543333322221111   457999998875  389999999


Q ss_pred             eeeeecCCCCCCceEEEEEcc-cCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMEL-CTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.|      ++++++|++||- -+|-||++++..    ++.++|+.++.+|.||+-+
T Consensus       636 dfF------Eddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~ag  682 (772)
T KOG1152|consen  636 DFF------EDDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAG  682 (772)
T ss_pred             hee------ecCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhc
Confidence            999      999999999995 457899999954    2359999999999999754

>KOG0695|consensus

Probab=99.59  E-value=6.5e-16  Score=107.06  Aligned_cols=117  Identities=22%  Similarity=0.327  Sum_probs=98.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|.++.+||+|++.+|.+++.+++.+.||+|++++......+....        ...|..++....+||.++.++.
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidw--------vqtek~vfe~asn~pflvglhs  318 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDW--------VQTEKHVFEQASNNPFLVGLHS  318 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchh--------HHhhHHHHHhccCCCeEEehhh
Confidence            34568999999999999999999999999999999998654333332222        4578889988888999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|      +++..+++|.||.+||+|...+++.+    .+++..+++|-..|+.|
T Consensus       319 cf------qtesrlffvieyv~ggdlmfhmqrqr----klpeeharfys~ei~la  363 (593)
T KOG0695|consen  319 CF------QTESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEICLA  363 (593)
T ss_pred             hh------cccceEEEEEEEecCcceeeehhhhh----cCcHHHhhhhhHHHHHH
Confidence            99      89999999999999999999887533    39999999999988866

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.59  E-value=1.2e-14  Score=103.45  Aligned_cols=119  Identities=18%  Similarity=0.381  Sum_probs=90.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..++..+|+|.+...........         .+.+|+.+++.+. ||||+++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~   81 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHAR---------RTYRELRLLKHMK-HENVIGLLD   81 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHH---------HHHHHHHHHHhcC-CCchhhhhh
Confidence            345789999999999999999999988999999998864321111111         1447999999998 999999998


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++............|++++++ +++|.++++   .  ..+++..++.++.|+++|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~---~--~~l~~~~~~~i~~qi~~a  130 (343)
T cd07878          82 VFTPATSIENFNEVYLVTNLM-GADLNNIVK---C--QKLSDEHVQFLIYQLLRG  130 (343)
T ss_pred             hhcccccccccCcEEEEeecC-CCCHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            874322112335689999988 788888773   2  249999999999999876

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.59  E-value=2.6e-14  Score=100.08  Aligned_cols=122  Identities=18%  Similarity=0.373  Sum_probs=92.2

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+....++|.+.+.||+|+||.||++....       .+..+++|.+..... ......         +.+|+.++..+.
T Consensus         9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~---------~~~E~~~l~~l~   78 (304)
T cd05101           9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSD---------LVSEMEMMKMIG   78 (304)
T ss_pred             cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHH---------HHHHHHHHHhhc
Confidence            355677899999999999999999997531       234688888763221 111111         457889999884


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++.+      ......|++|||+++|+|.+++...+.            ....++...+..++.|+++|
T Consensus        79 ~h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  149 (304)
T cd05101          79 KHKNIINLLGAC------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARG  149 (304)
T ss_pred             cCCCchheeEEE------ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHH
Confidence            499999999998      677889999999999999999964321            11247888899999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.59  E-value=4.8e-14  Score=96.99  Aligned_cols=120  Identities=20%  Similarity=0.283  Sum_probs=88.0

Q ss_pred             eEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      |++.+.||+|+||.||.+....+   +..+|+|.++...........         +.+|+..++.+. |||++++++.+
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~iv~~~~~~   70 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEE---------FLSEAACMKDFD-HPNVMKLIGVC   70 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHH---------HHHHHHHHHhCC-CCCeeeEEeee
Confidence            56788999999999999987543   367999988743322221111         457889999998 99999999887


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhh--CCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ............++++||+++|+|..++.....  ....+++..+..++.|++.|
T Consensus        71 ~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a  125 (273)
T cd05035          71 FEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG  125 (273)
T ss_pred             ccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence            432211223458999999999999999854332  22358999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.58  E-value=6e-14  Score=96.50  Aligned_cols=111  Identities=27%  Similarity=0.384  Sum_probs=87.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++......||+|+||.||++.+..++..+++|.+......  ...         .+.+|+.+++.+. |+||+++++.+ 
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~--~~~---------~~~~e~~~l~~l~-h~~iv~~~~~~-   74 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR--YVQ---------PLHEEIALHSYLK-HRNIVQYLGSD-   74 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH--HHH---------HHHHHHHHHHhcC-CCCeeeeeeee-
Confidence            3444456899999999999998888889999987643211  111         1457899999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCC--CHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL--SEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l--~~~~~~~~~~qi~~a  151 (152)
                           ...+..++++||+++++|.++++...   ..+  ++..+..++.|++.|
T Consensus        75 -----~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~qi~~a  120 (268)
T cd06624          75 -----SENGFFKIFMEQVPGGSLSALLRSKW---GPLKDNEQTIIFYTKQILEG  120 (268)
T ss_pred             -----ccCCEEEEEEecCCCCCHHHHHHHhc---ccCCCcHHHHHHHHHHHHHH
Confidence                 67789999999999999999985321   134  888888999998876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.58  E-value=1e-14  Score=101.00  Aligned_cols=112  Identities=29%  Similarity=0.530  Sum_probs=90.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .+.|++.+.||+|+||.||++.+..++..+++|.+....  ......         +.+|+.+++.+. |||++++++.+
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~---------~~~e~~~l~~l~-h~~ii~~~~~~   71 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELED---------YMVEIDILASCD-HPNIVKLLDAF   71 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHH---------HHHHHHHHHHCC-CCCeeeEEEEE
Confidence            345788899999999999999998888889999885422  111111         457888999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..++++||+++++|..++..   ....+++..+..++.|+++|
T Consensus        72 ------~~~~~~~~v~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~  115 (282)
T cd06643          72 ------YYENNLWILIEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEA  115 (282)
T ss_pred             ------eeCCEEEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence                  567889999999999999887742   22358999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.58  E-value=8.4e-14  Score=99.24  Aligned_cols=119  Identities=24%  Similarity=0.389  Sum_probs=90.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||++.+..++..+|+|.+....... ....        .+.+|+.+++.+. ||||+++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~--------~~~~E~~~l~~l~-h~~iv~~~~   81 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSE-LFAK--------RAYRELRLLKHMK-HENVIGLLD   81 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccch-HHHH--------HHHHHHHHHHhcC-CCCccceee
Confidence            35678999999999999999999998899999999886432211 1111        1447999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++............+++|||+ +++|.+++.   .  ..+++..++.++.|+++|
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~---~--~~l~~~~~~~i~~qi~~a  130 (343)
T cd07880          82 VFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK---H--EKLSEDRIQFLVYQMLKG  130 (343)
T ss_pred             eecCCccccccceEEEEEecC-CCCHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            884321111123569999999 788888773   2  258999999999999876

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0658|consensus

Probab=99.58  E-value=3.2e-15  Score=103.69  Aligned_cols=114  Identities=24%  Similarity=0.332  Sum_probs=92.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      -.|...+.+|.|+||.||.+....+++.+|+|.+-.....               -.+|..+|+.+. ||||+++..+|.
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---------------knrEl~im~~l~-HpNIV~L~~~f~   87 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---------------KNRELQIMRKLD-HPNIVRLLYFFS   87 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---------------CcHHHHHHHhcC-CcCeeeEEEEEE
Confidence            3588899999999999999999999999999987543321               126888999888 999999998886


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.+. +.-++.+||||++ -+|...++.....+..++.-.++-|+.||++|
T Consensus        88 ~~~~~-d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrg  137 (364)
T KOG0658|consen   88 SSTES-DEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRG  137 (364)
T ss_pred             ecCCC-chhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHH
Confidence            65421 2447888999996 48888887665566679999999999999876

>KOG0193|consensus

Probab=99.58  E-value=6.5e-15  Score=108.02  Aligned_cols=120  Identities=23%  Similarity=0.315  Sum_probs=98.2

Q ss_pred             cccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812           9 HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      ..+...|.++.+...+.+.||+|.||.||+|.+-   ..||||.+.......+..+.         |.+|+.++++.+ |
T Consensus       381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqa---------FKnEVa~lkkTR-H  447 (678)
T KOG0193|consen  381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQA---------FKNEVAVLKKTR-H  447 (678)
T ss_pred             CccccccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHH---------HHHHHHHHhhcc-h
Confidence            3444677888888999999999999999999873   35899999865544443332         779999999999 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||+-+.+++      ..++. .||+.+|+|-+|+.+++...   ..|....++.|++||+++
T Consensus       448 ~NIlLFMG~~------~~p~~-AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqG  500 (678)
T KOG0193|consen  448 ENILLFMGAC------MNPPL-AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQG  500 (678)
T ss_pred             hhheeeehhh------cCCce-eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHh
Confidence            9999999999      44554 99999999999999996433   359999999999999875

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.58  E-value=4.3e-14  Score=97.31  Aligned_cols=119  Identities=18%  Similarity=0.261  Sum_probs=86.4

Q ss_pred             EEEEEeeccceeEEEEEEEcCCCC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETGD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .+.+.||+|+||.||++.....+.  .+|+|.++...........         +.+|+.+++.++ ||||+++++.+..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~~~~   71 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---------FLSEAVCMKEFD-HPNVMRLIGVCLQ   71 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHH---------HHHHHHHHHhCC-CCCcceEEEEEcc
Confidence            467889999999999999866655  5889988754322222221         457889999998 9999999987632


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhh--hCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMK--KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..........+++|||+++|+|.+++....  .....+++..+..++.|++.|
T Consensus        72 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (272)
T cd05075          72 TVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG  124 (272)
T ss_pred             CCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHH
Confidence            111112346899999999999998874322  222358999999999999876

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PHA02988 hypothetical protein; Provisional

Probab=99.58  E-value=2.7e-14  Score=99.24  Aligned_cols=109  Identities=18%  Similarity=0.277  Sum_probs=83.7

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      ..||+|+++.||++..  +|+.+|+|.++......+....   .     +.+|+.++.++. ||||+++++++....  .
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~---~-----~~~E~~~l~~l~-h~nIv~~~g~~~~~~--~   92 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLID---I-----TENEIKNLRRID-SNNILKIYGFIIDIV--D   92 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHH---H-----HHHHHHHHHhcC-CCCEEEEeeeEEecc--c
Confidence            5789999999999986  6889999998754332222211   1     558999999998 999999999884211  1


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ....++++|||+++|+|.+++..   . ..+++.....++.|++.|
T Consensus        93 ~~~~~~lv~Ey~~~g~L~~~l~~---~-~~~~~~~~~~i~~~i~~~  134 (283)
T PHA02988         93 DLPRLSLILEYCTRGYLREVLDK---E-KDLSFKTKLDMAIDCCKG  134 (283)
T ss_pred             CCCceEEEEEeCCCCcHHHHHhh---C-CCCChhHHHHHHHHHHHH
Confidence            24578999999999999999853   2 258888999999888765

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.58  E-value=3.4e-14  Score=98.77  Aligned_cols=116  Identities=25%  Similarity=0.429  Sum_probs=89.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..++|.+.+.||+|+||.||++....     ++..+++|.+....   ......        +.+|+.++..+. |||++
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~--------~~~e~~~l~~l~-h~~i~   70 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKD--------FHREAELLTNLQ-HEHIV   70 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHH--------HHHHHHHHHhCC-CCCcc
Confidence            35689999999999999999997532     34558888776422   111111        457999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh---------CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+.++++|||+++++|.+++.....         ....+++..++.++.|++.|
T Consensus        71 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~a  132 (288)
T cd05093          71 KFYGVC------VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG  132 (288)
T ss_pred             eEEEEE------ecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence            999998      677889999999999999999964321         11248999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.58  E-value=4.5e-14  Score=96.74  Aligned_cols=112  Identities=25%  Similarity=0.374  Sum_probs=87.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.++|.+.+.||+|++|.||++.+... ..+++|.+.......+.            +.+|+.+++.+. ||+++++++
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i~~~~~   68 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEA------------FLQEAQIMKKLR-HDKLVPLYA   68 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHH------------HHHHHHHHHhCC-CCCeeeEEE
Confidence            4567899999999999999999987544 46899987643221111            457889999998 999999998


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      . .+..+++|||+++|+|.+++...  ....+++..+..++.|++.|
T Consensus        69 ~~------~-~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~a  114 (260)
T cd05069          69 VV------S-EEPIYIVTEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADG  114 (260)
T ss_pred             EE------c-CCCcEEEEEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHH
Confidence            77      3 45689999999999999999532  23358999999999999876

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.58  E-value=4.4e-15  Score=102.63  Aligned_cols=111  Identities=37%  Similarity=0.561  Sum_probs=89.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .+.|+..+.||+|+||.||++.+..++..+|+|.+...... . ....        +.+|+.+++.+. |||++++++.+
T Consensus         3 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~-~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~   71 (277)
T cd06642           3 EELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-D-EIED--------IQQEITVLSQCD-SPYITRYYGSY   71 (277)
T ss_pred             HHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-H-HHHH--------HHHHHHHHHcCC-CCccHhhhccc
Confidence            34567778899999999999998888889999988643221 1 1111        457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..|++|||+++++|.+++..     ..+++..++.++.|+++|
T Consensus        72 ------~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~  113 (277)
T cd06642          72 ------LKGTKLWIIMEYLGGGSALDLLKP-----GPLEETYIATILREILKG  113 (277)
T ss_pred             ------ccCCceEEEEEccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHH
Confidence                  677889999999999999988842     248999999999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.58  E-value=5.3e-14  Score=97.27  Aligned_cols=110  Identities=31%  Similarity=0.464  Sum_probs=86.1

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|+||.||++.+..++..+|+|.+.......... .         ..+|+.++..+.+|+|++++++.+   
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~---------~~~e~~~l~~l~~h~~i~~~~~~~---   67 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-N---------NLREIQALRRLSPHPNILRLIEVL---   67 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-h---------HHHHHHHHhhcCCCCCccceEEEE---
Confidence            678899999999999999998889999999886532221111 1         235778888886699999999998   


Q ss_pred             CCCCCC--ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEE--DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...  +.++++|||++ |+|.+.+..   ....+++..++.++.|++.|
T Consensus        68 ---~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~  112 (282)
T cd07831          68 ---FDRKTGRLALVFELMD-MNLYELIKG---RKRPLPEKRVKSYMYQLLKS  112 (282)
T ss_pred             ---ecCCCCcEEEEEecCC-ccHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence               444  78999999996 588887743   22358999999999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.58  E-value=3.7e-14  Score=97.61  Aligned_cols=108  Identities=20%  Similarity=0.255  Sum_probs=81.5

Q ss_pred             EeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .||+|+||.||++....  ++..+++|.++....... ..         .+.+|+.+++.+. |||++++++.+      
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~-~~---------~~~~E~~~l~~l~-h~~iv~~~~~~------   64 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQE-QM---------KFLEEAQPYRSLQ-HSNLLQCLGQC------   64 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHH-HH---------HHHHHHHHHHhCC-CCCEeeEEEEE------
Confidence            58999999999997643  345688888764322111 11         1557999999998 99999999988      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhC-CCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKR-GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......+++|||+++|+|.++++..... ....++..++.++.|++.|
T Consensus        65 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~a  112 (269)
T cd05087          65 TEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALG  112 (269)
T ss_pred             cCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHH
Confidence            6777899999999999999999653322 2246777888888898876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.58  E-value=1.2e-13  Score=93.94  Aligned_cols=111  Identities=34%  Similarity=0.581  Sum_probs=90.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|+..+.||+|++|.||++.+..++..+++|.+............         +.+|+.+++.+. |||++++++.+  
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~--   68 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEA---------LEREIRILSSLQ-HPNIVRYYGSE--   68 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHH---------HHHHHHHHHHcC-CCCEeeEEEEE--
Confidence            478899999999999999999888999999998754322111111         557999999998 99999999998  


Q ss_pred             cCCCCCC--ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEE--DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...  ...++++||+++++|.+++...   . .+++..+..++.|++.|
T Consensus        69 ----~~~~~~~~~lv~e~~~~~~L~~~~~~~---~-~~~~~~~~~~~~~l~~~  113 (260)
T cd06606          69 ----RDEEKNTLNIFLEYVSGGSLSSLLKKF---G-KLPEPVIRKYTRQILEG  113 (260)
T ss_pred             ----ecCCCCeEEEEEEecCCCcHHHHHHHc---C-CCCHHHHHHHHHHHHHH
Confidence                445  7899999999999999998532   2 58999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.58  E-value=4.2e-14  Score=97.81  Aligned_cols=115  Identities=24%  Similarity=0.417  Sum_probs=89.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcC----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVE----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .++|++.+.||+|+||.||++....    ++..+|+|.+......  .....        +.+|+.+++.+. |||++++
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~--------~~~ei~~l~~l~-~~~i~~~   71 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSD--------FEREIEILRTLD-HENIVKY   71 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHH--------HHHHHHHHHhCC-CCChheE
Confidence            4578889999999999999998643    4678999998754322  11111        557889999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++..    ......+++|||+++++|.+++...   ...+++..+..++.|++.|
T Consensus        72 ~~~~~~----~~~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~a  121 (284)
T cd05038          72 KGVCEK----PGGRSLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKG  121 (284)
T ss_pred             Eeeeec----CCCCceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHH
Confidence            988721    2356799999999999999998532   2248999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.58  E-value=6e-14  Score=96.59  Aligned_cols=114  Identities=26%  Similarity=0.443  Sum_probs=87.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...++|.+.+.||+|+||.||++.+...   ...+++|....... .. ....        +.+|+.+++.+. |||+++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~-~~~~--------~~~e~~~l~~~~-h~~i~~   71 (270)
T cd05056           3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PS-VREK--------FLQEAYIMRQFD-HPHIVK   71 (270)
T ss_pred             echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HH-HHHH--------HHHHHHHHHhCC-CCchhc
Confidence            3456799999999999999999987543   23578887754321 11 1111        557999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      . .+..+++|||+++|+|.+++..   ....+++..++.++.|++.|
T Consensus        72 ~~~~~------~-~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~  119 (270)
T cd05056          72 LIGVI------T-ENPVWIVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTA  119 (270)
T ss_pred             eeEEE------c-CCCcEEEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            99988      3 3557899999999999999953   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.58  E-value=4.5e-14  Score=98.63  Aligned_cols=116  Identities=23%  Similarity=0.400  Sum_probs=88.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ++|++.+.||+|+||.||++....++.  .+++|.++... .......         +.+|+.++.++..|||++++++.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~---------~~~E~~~l~~l~~hp~iv~~~~~   71 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRD---------FAGELEVLCKLGHHPNIINLLGA   71 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHH---------HHHHHHHHHhhcCCCchhheEEE
Confidence            579999999999999999998876654  36777665321 1111111         45788888888449999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|+++||+++|+|.++++....            ....+++..++.++.|++.|
T Consensus        72 ~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  131 (297)
T cd05089          72 C------ENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATG  131 (297)
T ss_pred             E------ccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHH
Confidence            8      677889999999999999999964221            11248899999999999876

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.57  E-value=1.1e-13  Score=94.56  Aligned_cols=110  Identities=24%  Similarity=0.398  Sum_probs=88.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|++.+.||+|+||.||++.+. .+..+++|.+.........            +.+|+.+++.+. ||+++++++.+
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~------------~~~e~~~l~~l~-~~~i~~~~~~~   68 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEED------------FIEEAQVMMKLS-HPKLVQLYGVC   68 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHH------------HHHHHHHHHhCC-CCCeeeEEEEE
Confidence            357999999999999999999874 4667899988643322111            446888999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ......+++|||+++++|.+++..   ....+++..++.++.|++.|
T Consensus        69 ------~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~  112 (256)
T cd05112          69 ------TERSPICLVFEFMEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEG  112 (256)
T ss_pred             ------ccCCceEEEEEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHH
Confidence                  677889999999999999998853   22358999999999988765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.57  E-value=3.9e-14  Score=98.42  Aligned_cols=114  Identities=18%  Similarity=0.367  Sum_probs=88.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +|++.+.||+|++|.||++...   .++..+|+|.++..........  ..     .+..|+.++..+.+||+++++++.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~--~~-----~~~~E~~~l~~~~~~~~i~~~~~~   73 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKT--AE-----HTRTERQVLEAVRRCPFLVTLHYA   73 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhH--HH-----HHHHHHHHHHhccCCcchhhhhee
Confidence            4889999999999999998864   3567899998874322111111  11     145789999999669999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......+++|||+++|+|.+++..   . ..+++..++.++.|+++|
T Consensus        74 ~------~~~~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~ql~~~  117 (288)
T cd05583          74 F------QTDTKLHLILDYVNGGELFTHLYQ---R-EHFTESEVRVYIAEIVLA  117 (288)
T ss_pred             e------ecCCEEEEEEecCCCCcHHHHHhh---c-CCcCHHHHHHHHHHHHHH
Confidence            8      678889999999999999998842   2 258999999999998875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0201|consensus

Probab=99.57  E-value=4.8e-16  Score=109.99  Aligned_cols=115  Identities=42%  Similarity=0.624  Sum_probs=92.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+...|...+.||+|+||.||++.+..+++.+|+|++.......+     +..     +..|+.++.++. ++||.++|
T Consensus         9 ~~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~de-----Ied-----iqqei~~Ls~~~-~~~it~yy   77 (467)
T KOG0201|consen    9 IDPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDE-----IED-----IQQEISVLSQCD-SPNITEYY   77 (467)
T ss_pred             CCcccccccchhccccccceeeeeeeccccceEEEEEechhhcchh-----hHH-----HHHHHHHHHhcC-cchHHhhh
Confidence            4456678888999999999999999999999999999975322211     111     447899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      -....+|++||||.||++.++++    .+..+.+..+..++++++.|
T Consensus        78 gsy------l~g~~LwiiMey~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~  123 (467)
T KOG0201|consen   78 GSY------LKGTKLWIIMEYCGGGSVLDLLK----SGNILDEFEIAVILREVLKG  123 (467)
T ss_pred             hhe------eecccHHHHHHHhcCcchhhhhc----cCCCCccceeeeehHHHHHH
Confidence            999      46788999999999999999994    23345888888888777665

>KOG0607|consensus

Probab=99.57  E-value=2.6e-15  Score=103.28  Aligned_cols=107  Identities=22%  Similarity=0.396  Sum_probs=91.4

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .+.||+|+++.|--|....++..||+|+|.+...+....           ..+|+.++..-.+|+||+++++.|      
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~R-----------vfREVe~f~~Cqgh~nilqLiefF------  145 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSR-----------VFREVETFYQCQGHKNILQLIEFF------  145 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHH-----------HHHHHHHHHHhcCCccHHHHHHHh------
Confidence            457999999999999998999999999998754332211           458999998888899999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +.+...|+|||-+.||+|...|+..+    .|++..+..+..+|+.|+
T Consensus       146 Edd~~FYLVfEKm~GGplLshI~~~~----~F~E~EAs~vvkdia~aL  189 (463)
T KOG0607|consen  146 EDDTRFYLVFEKMRGGPLLSHIQKRK----HFNEREASRVVKDIASAL  189 (463)
T ss_pred             cccceEEEEEecccCchHHHHHHHhh----hccHHHHHHHHHHHHHHH
Confidence            89999999999999999999996432    599999999999998773

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=4.4e-14  Score=96.69  Aligned_cols=108  Identities=26%  Similarity=0.405  Sum_probs=82.2

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+..+++.+|+|.+++...........        +..|..++.....|+|++++++.+      .
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~e~~~~~~~~~~~~i~~~~~~~------~   67 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTN--------VKAERAIMMIQGESPYVAKLYYSF------Q   67 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHH--------HHHHHHHHhhcCCCCCeeeeeeeE------E
Confidence            56899999999999998889999999986532211111111        223444444443499999999999      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+.+|+++||+++++|.++++..    ..+++..+..++.|+++|
T Consensus        68 ~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~a  109 (260)
T cd05611          68 SKDYLYLVMEYLNGGDCASLIKTL----GGLPEDWAKQYIAEVVLG  109 (260)
T ss_pred             cCCeEEEEEeccCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            778999999999999999998532    258999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.57  E-value=1.1e-13  Score=98.11  Aligned_cols=116  Identities=28%  Similarity=0.402  Sum_probs=90.1

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|++.+.||.|+||.||++.+..++..+|+|.+.+..........         +.+|+.++..+. |||++++
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpniv~~   74 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR---------TYRELKLLKHLR-HENIISL   74 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHH---------HHHHHHHHHhcC-CCCeeeE
Confidence            344667899999999999999999999889999999987643221111111         447889999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.+.     ......++++||+ +++|.++++   .  ..+++..+..++.|+++|
T Consensus        75 ~~~~~-----~~~~~~~lv~e~~-~~~L~~~~~---~--~~~~~~~~~~~~~ql~~a  120 (328)
T cd07856          75 SDIFI-----SPLEDIYFVTELL-GTDLHRLLT---S--RPLEKQFIQYFLYQILRG  120 (328)
T ss_pred             eeeEe-----cCCCcEEEEeehh-ccCHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            99883     2356789999999 678887773   2  248889999999998876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.57  E-value=1e-13  Score=99.09  Aligned_cols=117  Identities=25%  Similarity=0.397  Sum_probs=89.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. |||+++++++
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~   83 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKR---------AYRELVLMKLVN-HKNIIGLLNV   83 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHH---------HHHHHHHHHhcC-CCCCcceeee
Confidence            457899999999999999999999989999999988643222221111         346899999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..........+.|++|||+. ++|.+.+..      .+++..+..++.|++.|
T Consensus        84 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~a  130 (353)
T cd07850          84 FTPQKSLEEFQDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCG  130 (353)
T ss_pred             eccCCCccccCcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHH
Confidence            843221123356899999995 588887732      28999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.57  E-value=1.9e-14  Score=100.16  Aligned_cols=114  Identities=26%  Similarity=0.415  Sum_probs=89.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+++|.++....... ...        .+.+|+.++..+. |||++++.+++.
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~--------~~~~e~~~l~~l~-h~ni~~~~~~~~   74 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG-FPI--------TSLREINILLKLQ-HPNIVTVKEVVV   74 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccccc-chh--------hHHHHHHHHHhcC-CCCEEEEEEEEE
Confidence            579999999999999999999988899999999875432211 110        1346889999998 999999999884


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .    .....+|++|||+. ++|.+++....   ..+++..++.++.|+++|
T Consensus        75 ~----~~~~~~~lv~e~~~-~~L~~~~~~~~---~~l~~~~~~~i~~qi~~a  118 (293)
T cd07843          75 G----SNLDKIYMVMEYVE-HDLKSLMETMK---QPFLQSEVKCLMLQLLSG  118 (293)
T ss_pred             e----cCCCcEEEEehhcC-cCHHHHHHhcc---CCCCHHHHHHHHHHHHHH
Confidence            2    22378999999996 58988885322   258999999999999886

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.57  E-value=9.1e-14  Score=99.12  Aligned_cols=122  Identities=21%  Similarity=0.417  Sum_probs=92.3

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|.+.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.++..++ ||||++
T Consensus        11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~Ei~~l~~l~-h~~iv~   80 (345)
T cd07877          11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---------TYRELRLLKHMK-HENVIG   80 (345)
T ss_pred             HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHH---------HHHHHHHHHHcC-CCcccc
Confidence            3455678899999999999999999998888999999988653221111111         447899999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+............|++++++ +++|.++++.    + .+++..++.++.|+++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~-~l~~~~~~~i~~qi~~a  132 (345)
T cd07877          81 LLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----Q-KLTDDHVQFLIYQILRG  132 (345)
T ss_pred             eeeeeeecccccccccEEEEehhc-ccCHHHHHhc----C-CCCHHHHHHHHHHHHHH
Confidence            998874322112335588999987 8898887742    2 48999999999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.57  E-value=6.6e-14  Score=98.23  Aligned_cols=117  Identities=38%  Similarity=0.576  Sum_probs=92.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.+.|++.+.||+|+||.||++....+++.+++|.+.............        +.+|+.+++.+. |||++++.
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~--------~~~Ei~~l~~l~-h~niv~~~   81 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD--------IIKEVRFLQQLR-HPNTIEYK   81 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHH--------HHHHHHHHHhCC-CCCEEEEE
Confidence            456677999999999999999999988889999999986433222211111        457899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..|+++||+. |++.+++...   ...+++..+..++.|++.|
T Consensus        82 ~~~------~~~~~~~lv~e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~  127 (307)
T cd06607          82 GCY------LREHTAWLVMEYCL-GSASDILEVH---KKPLQEVEIAAICHGALQG  127 (307)
T ss_pred             EEE------EeCCeEEEEHHhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHH
Confidence            999      56778999999996 6777777432   2358999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.57  E-value=4.3e-14  Score=100.28  Aligned_cols=116  Identities=26%  Similarity=0.427  Sum_probs=90.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..++..+++|.+............         +.+|+.+++.+. ||||+++++++
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~iv~~~~~~   73 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKR---------TLRELKILRHFK-HDNIIAIRDIL   73 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHH---------HHHHHHHHHhcC-CCCccCHHHhc
Confidence            47899999999999999999999889999999988753221111111         446899999998 99999999887


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ....  .....++++|||+. |+|.+++..    +..+++..++.++.|+++|
T Consensus        74 ~~~~--~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~a  119 (334)
T cd07855          74 RPPG--ADFKDVYVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRG  119 (334)
T ss_pred             cccC--CCCceEEEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHH
Confidence            4322  24467999999995 688887742    2359999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=4.7e-14  Score=97.38  Aligned_cols=110  Identities=36%  Similarity=0.659  Sum_probs=87.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~~~~   98 (152)
                      .|+..+.||+|+||.||++.+..++..+++|.+........ .. .        +.+|+.+++.+.  .|||++++++.+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~-~~-~--------~~~e~~~l~~l~~~~~~~vi~~~~~~   71 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDD-VS-D--------IQREVALLSQLRQSQPPNITKYYGSY   71 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchh-HH-H--------HHHHHHHHHHhccCCCCCeeeEeeee
Confidence            57888999999999999999988899999998864322111 11 1        346777777774  399999999988


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ......+++|||+++++|.++++.    + .+++..++.++.|+++|
T Consensus        72 ------~~~~~~~lv~e~~~~~~L~~~~~~----~-~l~~~~~~~i~~~i~~~  113 (277)
T cd06917          72 ------LKGPRLWIIMEYAEGGSVRTLMKA----G-PIAEKYISVIIREVLVA  113 (277)
T ss_pred             ------eeCCEEEEEEecCCCCcHHHHHHc----c-CCCHHHHHHHHHHHHHH
Confidence                  567889999999999999998842    2 58999999999998875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.57  E-value=6.7e-14  Score=95.39  Aligned_cols=110  Identities=29%  Similarity=0.466  Sum_probs=87.7

Q ss_pred             EEEEEeeccceeEEEEEEEcCCC----CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETG----DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~----~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ++.+.||.|+||.||++.+...+    ..+|+|.+....... ....         +..|+.++..+. |+|++++++.+
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~   70 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ-QIEE---------FLREARIMRKLD-HPNIVKLLGVC   70 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-HHHH---------HHHHHHHHHhcC-CCchheEEEEE
Confidence            56788999999999999987655    789999986543211 1111         457899999996 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++++|.++++.....  .+++..+..++.|++.|
T Consensus        71 ------~~~~~~~~i~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~  115 (258)
T smart00219       71 ------TEEEPLMIVMEYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARG  115 (258)
T ss_pred             ------cCCCeeEEEEeccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHH
Confidence                  6678899999999999999998643221  28999999999999876

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.57  E-value=5.8e-14  Score=98.07  Aligned_cols=119  Identities=28%  Similarity=0.385  Sum_probs=88.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+++|.+...........         .+.+|+.+++.++ |||++++++.+
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~---------~~~~e~~~~~~l~-h~~i~~~~~~~   75 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPI---------TAIREIKILRQLN-HRNIVNLKEIV   75 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchH---------HHHHHHHHHHhCC-CCCeeeeehee
Confidence            4689999999999999999999988899999999875322111111         1346889999998 99999999888


Q ss_pred             eecC----CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRG----GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~----~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ....    .....+.+++++||+++ ++.+++..   ....+++..++.++.|++.|
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~a  128 (302)
T cd07864          76 TDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEG  128 (302)
T ss_pred             cCcchhhhccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHH
Confidence            3211    00012379999999965 77777642   22358999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.56  E-value=1.3e-13  Score=95.46  Aligned_cols=119  Identities=18%  Similarity=0.302  Sum_probs=91.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|++.+.||+|+||.||++.+..+    +..+++|.+.... .......         +.+|+.+++.+. |||++
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~---------~~~e~~~l~~l~-h~ni~   71 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTL---------LLQESCLLYGLS-HQNIL   71 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHH---------HHHHHHHHHhCC-CCCCC
Confidence            3567899999999999999999997652    4668888775322 1111111         457889999997 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCC----CCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG----VSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+.     ......++++||+++|+|.+++.......    ..+++..++.++.|++.|
T Consensus        72 ~~~~~~~-----~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~  129 (280)
T cd05043          72 PILHVCI-----EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACG  129 (280)
T ss_pred             eEEEEEe-----cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHH
Confidence            9999763     34577899999999999999996543221    358999999999999876

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.56  E-value=8.5e-14  Score=95.12  Aligned_cols=112  Identities=24%  Similarity=0.392  Sum_probs=88.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++..  .+..+++|.++.... .+            .+.+|+.+++.+. |++++++++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~-~~------------~~~~e~~~l~~l~-~~~i~~~~~   66 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQ------------AFLAEASVMTQLR-HSNLVQLLG   66 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch-HH------------HHHHHHHHHHhCC-CCCeeeEEE
Confidence            3456899999999999999999975  467889998764211 11            1457888999998 999999998


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+.     ...+..+++|||+++++|.++++..  ....+++..++.++.|++.|
T Consensus        67 ~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~  114 (256)
T cd05082          67 VIV-----EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEA  114 (256)
T ss_pred             EEE-----cCCCceEEEEECCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHH
Confidence            753     4566799999999999999998532  22348999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.56  E-value=7.4e-14  Score=95.68  Aligned_cols=105  Identities=21%  Similarity=0.349  Sum_probs=85.7

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||.|++|.||++.+..+++.+++|.+.+...........        +.+|+.+++.+. |||++++++.+      ...
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~------~~~   65 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEH--------IFSEKEILEECN-HPFIVKLYRTF------KDK   65 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHH--------HHHHHHHHHhCC-CCCEeeeeeeE------EcC
Confidence            689999999999998889999999997543222221111        557899999998 99999999998      678


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...++++||+++++|.++++..    ..+++..+..++.|+++|
T Consensus        66 ~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~  105 (262)
T cd05572          66 KYIYMLMEYCLGGELWTILRDR----GLFDEYTARFYIACVVLA  105 (262)
T ss_pred             CccEEEEecCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHH
Confidence            8899999999999999998531    248999999999999876

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.56  E-value=5.3e-14  Score=97.89  Aligned_cols=114  Identities=21%  Similarity=0.420  Sum_probs=86.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      +|++.+.||+|+||.||++....     ....+++|.+..... ......         +.+|+.++..+. ||||++++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~~iv~~~   69 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRD---------LLSEFNLLKQVN-HPHVIKLY   69 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHH---------HHHHHHHHhhCC-CCCEeeEE
Confidence            47888999999999999998643     224577787754322 111111         557899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--------------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--------------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..++++||+.+|+|.+++.....                    ....+++..++.++.|++.|
T Consensus        70 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~  139 (290)
T cd05045          70 GAC------SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG  139 (290)
T ss_pred             EEE------ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence            998      677889999999999999999864321                    11247889999999999876

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.56  E-value=1.1e-13  Score=98.33  Aligned_cols=117  Identities=26%  Similarity=0.399  Sum_probs=89.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. |+|++++++.+
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~ni~~~~~~~   73 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKR---------TLREIKLLRHLD-HENVIAIKDIM   73 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHH---------HHHHHHHHHhcC-CCCccchHHhe
Confidence            45799999999999999999999889999999988643221111111         346889999998 99999999877


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..... .....+|+++||+. ++|.+++..    +..+++..++.++.|++.|
T Consensus        74 ~~~~~-~~~~~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~a  120 (337)
T cd07858          74 PPPHR-EAFNDVYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRG  120 (337)
T ss_pred             ecccc-cccCcEEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHH
Confidence            42111 12246899999994 788888742    2359999999999999876

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.56  E-value=7.5e-14  Score=95.24  Aligned_cols=109  Identities=27%  Similarity=0.427  Sum_probs=87.5

Q ss_pred             EEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|+||.||++.....   +..+++|.+.......  ...        .+.+|+.++..+. |+|++++++.+    
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~--------~~~~e~~~l~~~~-~~~i~~~~~~~----   65 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERK--------DFLKEARVMKKLG-HPNVVRLLGVC----   65 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHH--------HHHHHHHHHhhcC-CCChheeeeee----
Confidence            3689999999999998765   7889999987543322  111        1557999999998 99999999998    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhC-----CCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKR-----GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~~~~qi~~a  151 (152)
                        ......+++|||+++++|.++++.....     ...+++..++.++.|+++|
T Consensus        66 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a  117 (262)
T cd00192          66 --TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG  117 (262)
T ss_pred             --cCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH
Confidence              6688899999999999999999653211     2469999999999999876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=8.7e-14  Score=102.59  Aligned_cols=105  Identities=16%  Similarity=0.162  Sum_probs=87.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ...|.+.+.||+|+||.||++.+..+++.+|+|.....                 .+.+|+.+++.++ |+||+++++.+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-----------------~~~~E~~iL~~L~-HpnIv~l~~~~  229 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYA-----------------SSVHEARLLRRLS-HPAVLALLDVR  229 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccccc-----------------CHHHHHHHHHHCC-CCCCCcEEEEE
Confidence            44799999999999999999999888999999953211                 0346899999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++||++ .++|.+++..   ....+++..++.++.|++.|
T Consensus       230 ------~~~~~~~lv~e~~-~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~a  272 (461)
T PHA03211        230 ------VVGGLTCLVLPKY-RSDLYTYLGA---RLRPLGLAQVTAVARQLLSA  272 (461)
T ss_pred             ------EECCEEEEEEEcc-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence                  5678899999999 5788888742   22359999999999999876

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.56  E-value=1.3e-13  Score=95.39  Aligned_cols=113  Identities=19%  Similarity=0.333  Sum_probs=87.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|++.+.||+|+||.||++....++.    .+|+|.++....  ......        +.+|+.++..+. |||++.
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~--------~~~e~~~l~~~~-~~~i~~   73 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKE--------ILDEAYVMAGVG-SPYVCR   73 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC--HHHHHH--------HHHHHHHHHhcC-CCCCce
Confidence            34689999999999999999998766665    478888764321  111111        447888888888 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      . ....++++||+++|+|.++++.   ....+++..++.++.|++.|
T Consensus        74 ~~~~~------~-~~~~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~  121 (279)
T cd05109          74 LLGIC------L-TSTVQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKG  121 (279)
T ss_pred             EEEEE------c-CCCcEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHH
Confidence            99988      3 3457899999999999998853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.56  E-value=7.7e-14  Score=96.63  Aligned_cols=113  Identities=25%  Similarity=0.352  Sum_probs=84.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCe----EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDH----VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~----~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|++.+.||+|+||.||++....++..    +++|.+....  ......+        +..|+..+..+. ||||++
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~--------~~~~~~~l~~l~-h~~iv~   73 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQE--------ITDHMLAMGSLD-HAYIVR   73 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHH--------HHHHHHHHhcCC-CCCcce
Confidence            346889999999999999999998776664    5666654211  1111111        346777788888 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      . ....++++||+++|+|.+++..   ....+++..++.++.|++.|
T Consensus        74 ~~~~~------~-~~~~~~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~  121 (279)
T cd05111          74 LLGIC------P-GASLQLVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKG  121 (279)
T ss_pred             EEEEE------C-CCccEEEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            99987      3 3457899999999999999953   22358999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PTZ00284 protein kinase; Provisional

Probab=99.56  E-value=1.7e-13  Score=101.36  Aligned_cols=112  Identities=23%  Similarity=0.369  Sum_probs=82.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-----CCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-----VHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~   92 (152)
                      ..++|++.+.||+|+||.||++.+..++..||+|+++.........            ..|+.++..+.     .|.+++
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~------------~~e~~~l~~l~~~~~~~~~~i~  194 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDA------------KIEIQFMEKVRQADPADRFPLM  194 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHH------------HHHHHHHHHHhhcCcccCccee
Confidence            4578999999999999999999998889999999986422111111            13444444332     156688


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+++++.     ...+++|++||++ |++|.+++..   . ..+++..++.++.||+.|
T Consensus       195 ~i~~~~~-----~~~~~~~iv~~~~-g~~l~~~l~~---~-~~l~~~~~~~i~~qi~~a  243 (467)
T PTZ00284        195 KIQRYFQ-----NETGHMCIVMPKY-GPCLLDWIMK---H-GPFSHRHLAQIIFQTGVA  243 (467)
T ss_pred             eeEEEEE-----cCCceEEEEEecc-CCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            8888873     3346799999988 7888888843   2 259999999999999876

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.56  E-value=2.8e-14  Score=113.52  Aligned_cols=102  Identities=23%  Similarity=0.406  Sum_probs=84.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .+.....||+|+||.||++....++..+|+|.+......               ...|+..+++++ ||||+++++++  
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------~~~~~~~l~~l~-HpnIv~~~~~~--  752 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---------------PSSEIADMGKLQ-HPNIVKLIGLC--  752 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---------------cHHHHHHHhhCC-CCCcceEEEEE--
Confidence            355567899999999999998888999999988642211               113567788887 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..|+||||+++|+|.++++       .+++..+..++.|+++|
T Consensus       753 ----~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~  792 (968)
T PLN00113        753 ----RSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKA  792 (968)
T ss_pred             ----EcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHH
Confidence                66778999999999999999984       27899999999999876

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.56  E-value=8.5e-14  Score=94.71  Aligned_cols=105  Identities=26%  Similarity=0.441  Sum_probs=82.4

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.. .++..+|+|.+...... . ...        .+.+|+.++..+. |||++++++.+      .
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~-~-~~~--------~~~~e~~~l~~l~-h~~i~~~~~~~------~   62 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQ-E-LKI--------KFLSEARILKQYD-HPNIVKLIGVC------T   62 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCH-H-HHH--------HHHHHHHHHHhCC-CCCcCeEEEEE------e
Confidence            3689999999999985 46788999987643211 1 111        1457899999998 99999999998      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+..+++|||+++++|.+++..   ....+++..+..++.|+++|
T Consensus        63 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~  105 (250)
T cd05085          63 QRQPIYIVMELVPGGDFLSFLRK---KKDELKTKQLVKFALDAAAG  105 (250)
T ss_pred             cCCccEEEEECCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            67789999999999999998843   22358999999999998865

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.55  E-value=1.2e-13  Score=95.59  Aligned_cols=109  Identities=21%  Similarity=0.317  Sum_probs=79.5

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPE  106 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~  106 (152)
                      .||+|+||.||++.+..+++.+|+|.+...............     ........+.... ||+++.+.+.+      ..
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~i~~~~~~~------~~   68 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIMLSLVSTGD-CPFIVCMSYAF------HT   68 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHH-----HHHHHHHHHHhCC-CCcEeeeeeee------ec
Confidence            379999999999998888999999998754322111100000     0011223344445 99999999999      67


Q ss_pred             CceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         107 EDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+..+++|||+.||+|.+++..    ...+++..++.++.|+++|
T Consensus        69 ~~~~~~v~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~  109 (278)
T cd05606          69 PDKLSFILDLMNGGDLHYHLSQ----HGVFSEAEMRFYAAEIILG  109 (278)
T ss_pred             CCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            8899999999999999888742    2359999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.55  E-value=5.5e-14  Score=95.98  Aligned_cols=109  Identities=27%  Similarity=0.388  Sum_probs=86.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.  ..+..+++|.++.... ..            .+.+|+.++..+. |||++++++.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~-~~------------~~~~e~~~l~~~~-~~~i~~~~~~   67 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVT-AQ------------AFLEETAVMTKLH-HKNLVRLLGV   67 (254)
T ss_pred             cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcch-HH------------HHHHHHHHHHhCC-CCCcCeEEEE
Confidence            45689999999999999999985  4677899998754211 10            1457889999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      .. +..+++|||+++++|.++++...  ...+++..+..++.|++.|
T Consensus        68 ~------~~-~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~a  112 (254)
T cd05083          68 I------LH-NGLYIVMELMSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEG  112 (254)
T ss_pred             E------cC-CCcEEEEECCCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHH
Confidence            8      33 44799999999999999996422  2358999999999999876

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.55  E-value=1.5e-13  Score=95.23  Aligned_cols=106  Identities=22%  Similarity=0.369  Sum_probs=78.9

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHH---HHhccCCCCCcceeeeeeeecCC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL---VLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~---~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      .||+|+||.||++.+..+++.+|+|.+.............        ...|..   ++.... ||+++.+++.+     
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-~~~i~~~~~~~-----   66 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL--------ALNERIMLSLVSTGD-CPFIVCMTYAF-----   66 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHH--------HHHHHHHHHHHhhCC-CCcEeEEEEEE-----
Confidence            3799999999999998889999999987543221111110        112222   233334 99999999998     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ...+..+++|||+++|+|.+++..   . ..+++..+..++.|++.|
T Consensus        67 -~~~~~~~lv~e~~~~~~L~~~i~~---~-~~l~~~~~~~i~~qi~~a  109 (279)
T cd05633          67 -HTPDKLCFILDLMNGGDLHYHLSQ---H-GVFSEKEMRFYATEIILG  109 (279)
T ss_pred             -ecCCeEEEEEecCCCCCHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence             677889999999999999988842   2 259999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.55  E-value=2.9e-14  Score=98.59  Aligned_cols=104  Identities=13%  Similarity=0.146  Sum_probs=77.5

Q ss_pred             EeeccceeEEEEEEEcCC------------------------CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHH
Q psy2812          27 LIGEGTYGEVYWAKDVET------------------------GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL   82 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~------------------------~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   82 (152)
                      .||+|+||.||++.....                        ...+++|.+....   .....        .+..|+.++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~--------~~~~~~~~~   70 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIAL--------AFFETASLM   70 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHH--------HHHHHHHHH
Confidence            589999999999874221                        1236677664321   11111        145688888


Q ss_pred             hccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          83 KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        83 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+. ||||+++++++      ...+..++||||+++|+|..++..   ....+++..+..++.|+++|
T Consensus        71 ~~l~-h~niv~~~~~~------~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~  129 (274)
T cd05076          71 SQVS-HIHLAFVHGVC------VRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASA  129 (274)
T ss_pred             hcCC-CCCeeeEEEEE------EeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            8888 99999999998      567789999999999999888842   23358999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.55  E-value=1.4e-13  Score=95.30  Aligned_cols=110  Identities=28%  Similarity=0.429  Sum_probs=87.4

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|++|.||++....++..+++|.+.......+ ....        +..|+.+++.+. |||++++++.+   
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~-~~~~--------~~~e~~~l~~l~-~~~i~~~~~~~---   67 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEG-FPIT--------AIREIKLLQKLR-HPNIVRLKEIV---   67 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccccccc-chHH--------HHHHHHHHHhcc-CCCeeeheeeE---
Confidence            6788999999999999999988899999999985431111 1111        446889999998 99999999998   


Q ss_pred             CCCCCC--ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEE--DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...  +..++++||++ ++|.+++..   ....+++..++.++.|+++|
T Consensus        68 ---~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~i~~~i~~a  112 (287)
T cd07840          68 ---TSKGKGSIYMVFEYMD-HDLTGLLDS---PEVKFTESQIKCYMKQLLEG  112 (287)
T ss_pred             ---ecCCCCcEEEEecccc-ccHHHHHhc---cCCCCCHHHHHHHHHHHHHH
Confidence               444  78999999996 588887742   22359999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG4257|consensus

Probab=99.55  E-value=2e-14  Score=106.42  Aligned_cols=114  Identities=27%  Similarity=0.478  Sum_probs=88.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCC--CC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVET--GD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~--~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .++...+.+.||.|.||.||.|.+...  |.  .||+|.-+.+-.. +.-..         |..|+.+|+.++ ||||++
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-d~tek---------flqEa~iMrnfd-HphIik  455 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-DDTEK---------FLQEASIMRNFD-HPHIIK  455 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-hhHHH---------HHHHHHHHHhCC-Ccchhh
Confidence            344456667899999999999987543  32  4778876643222 22111         667999999999 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +++++       .....|+|||+++-|.|..|++..   +..++.....-|+.|||.|.
T Consensus       456 LIGv~-------~e~P~WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~tal  504 (974)
T KOG4257|consen  456 LIGVC-------VEQPMWIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTAL  504 (974)
T ss_pred             eeeee-------eccceeEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHH
Confidence            99999       567799999999999999999743   33699999999999999873

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.55  E-value=1e-13  Score=95.45  Aligned_cols=108  Identities=18%  Similarity=0.185  Sum_probs=79.2

Q ss_pred             EeeccceeEEEEEEEcCCC--CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKDVETG--DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~--~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .||+|+||.||++.....+  ..+++|.+..... .. ....        +.+|+.++..+. |||++++++.+      
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~-~~~~--------~~~e~~~~~~l~-h~~iv~~~~~~------   64 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SK-EQNE--------FLQQGDPYRILQ-HPNILQCLGQC------   64 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hH-HHHH--------HHHHHHHHhccC-CcchhheEEEe------
Confidence            5899999999999754332  2355665543221 11 1111        557888899998 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......|++|||+++|+|.++++........+++..++.++.|+++|
T Consensus        65 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~a  111 (268)
T cd05086          65 VEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAG  111 (268)
T ss_pred             cCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHH
Confidence            67788999999999999999996543323347788888999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.55  E-value=1.3e-13  Score=94.53  Aligned_cols=104  Identities=22%  Similarity=0.407  Sum_probs=80.3

Q ss_pred             EeeccceeEEEEEEEc--CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKDV--ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~--~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .||+|+||.||++..+  ..+..+|+|.+.....  ......        +.+|+.+++.+. |||++++++.+      
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~--~~~~~~--------~~~E~~~l~~l~-h~~ii~~~~~~------   64 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE--KSVRDE--------MMREAEIMHQLD-NPYIVRMIGVC------   64 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC--hHHHHH--------HHHHHHHHHhcC-CCCeEEEEEEE------
Confidence            3899999999999765  3345689998864321  111111        457999999998 99999999987      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      + ....+++|||+++|+|.+++..   ....+++..++.++.|++.|
T Consensus        65 ~-~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~  107 (257)
T cd05115          65 E-AEALMLVMEMASGGPLNKFLSG---KKDEITVSNVVELMHQVSMG  107 (257)
T ss_pred             c-CCCeEEEEEeCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            4 3468999999999999998853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.55  E-value=9.2e-14  Score=96.22  Aligned_cols=111  Identities=32%  Similarity=0.425  Sum_probs=88.5

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|++|.||++.+..++..+++|.+............         +.+|+.+++.++ |||++++++.+   
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~E~~~l~~l~-~~~iv~~~~~~---   67 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPST---------AIREISLLKELN-HPNIVRLLDVV---   67 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhH---------HHHHHHHHHhcC-CCCccCHhhee---
Confidence            56788999999999999999889999999988743221111111         346888999998 99999999998   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...+..|++|||+ +++|.+++.....  ..+++..++.++.|+++|
T Consensus        68 ---~~~~~~~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~  111 (283)
T cd07835          68 ---HSENKLYLVFEFL-DLDLKKYMDSSPL--TGLDPPLIKSYLYQLLQG  111 (283)
T ss_pred             ---ccCCeEEEEEecc-CcCHHHHHhhCCC--CCCCHHHHHHHHHHHHHH
Confidence               6778999999999 4689988854222  358999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.55  E-value=1.2e-13  Score=95.89  Aligned_cols=114  Identities=46%  Similarity=0.658  Sum_probs=94.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....+.|++.+.||+|++|.||++.+..++..+++|.+.....    ...        .+.+|+.+++.+. |+|+++++
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~--------~~~~e~~~l~~l~-~~~i~~~~   81 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKE--------LIINEILIMKDCK-HPNIVDYY   81 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHH--------HHHHHHHHHHHCC-CCCeeEEE
Confidence            4567789999999999999999999988889999999875332    111        1447888899998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..|+++||+++++|.+++....   ..+++..+..++.|++.|
T Consensus        82 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~  128 (286)
T cd06614          82 DSY------LVGDELWVVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQG  128 (286)
T ss_pred             EEE------EECCEEEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHH
Confidence            999      56788999999999999999996432   259999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.55  E-value=1.3e-13  Score=95.50  Aligned_cols=110  Identities=25%  Similarity=0.305  Sum_probs=84.6

Q ss_pred             eEEEEEeeccceeEEEEEEE----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKD----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      |++.+.||+|+||.||++..    ..++..+|+|.+...... . ...        .+.+|+.+++.+. |||++++++.
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~-~~~--------~~~~E~~~l~~l~-h~~i~~~~~~   74 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-Q-NTS--------GWKKEINILKTLY-HENIVKYKGC   74 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh-H-HHH--------HHHHHHHHHHhCC-CCCEeeEEEE
Confidence            48999999999999988653    346778999988643211 1 111        1457999999998 9999999988


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..    .....++++|||+++++|.+++..   .  .+++..++.++.|++.|
T Consensus        75 ~~~----~~~~~~~lv~e~~~~~~l~~~~~~---~--~l~~~~~~~i~~~l~~~  119 (283)
T cd05080          75 CSE----QGGKGLQLIMEYVPLGSLRDYLPK---H--KLNLAQLLLFAQQICEG  119 (283)
T ss_pred             Eec----CCCceEEEEecCCCCCCHHHHHHH---c--CCCHHHHHHHHHHHHHH
Confidence            732    234568999999999999998842   2  48999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.55  E-value=2.1e-13  Score=95.54  Aligned_cols=119  Identities=25%  Similarity=0.391  Sum_probs=90.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+++|.+............         ..+|+.+++.++ ||||+++++.+
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~   76 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPIT---------ALREIKILKKLK-HPNVVPLIDMA   76 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchh---------HHHHHHHHHhcC-CCCccchhhhe
Confidence            57999999999999999999999889999999988743322111111         346888999998 99999999887


Q ss_pred             eecCCC--CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQ--PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......  .....+++++||+. +++...+..   .+..+++..++.++.|+++|
T Consensus        77 ~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~---~~~~~~~~~~~~i~~~l~~a  127 (311)
T cd07866          77 VERPDKSKRKRGSVYMVTPYMD-HDLSGLLEN---PSVKLTESQIKCYMLQLLEG  127 (311)
T ss_pred             ecccccccccCceEEEEEecCC-cCHHHHHhc---cccCCCHHHHHHHHHHHHHH
Confidence            542211  23456899999995 567666632   23369999999999999886

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.55  E-value=3.2e-13  Score=91.51  Aligned_cols=110  Identities=43%  Similarity=0.753  Sum_probs=91.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|.+.+.||+|++|.||++.+..++..+++|.+.....  ... .        .+.+|+.+++.+. |++++++.+.+  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~-~--------~~~~e~~~l~~l~-~~~i~~~~~~~--   66 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKK-E--------KIINEIQILKKCK-HPNIVKYYGSY--   66 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHH-H--------HHHHHHHHHHhCC-CCCEeEEEEEE--
Confidence            47889999999999999999988899999999875432  111 1        1457899999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..++++||+++++|.+++...   ...+++..+..++.|+++|
T Consensus        67 ----~~~~~~~l~~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~  110 (253)
T cd05122          67 ----LKKDELWIVMEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKG  110 (253)
T ss_pred             ----ecCCeEEEEEecCCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHH
Confidence                6778899999999999999988532   1358999999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.54  E-value=1.1e-13  Score=95.26  Aligned_cols=108  Identities=18%  Similarity=0.286  Sum_probs=79.9

Q ss_pred             EeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .||+|+||.||++....  ....+++|.+.....  ......        +.+|+.+++.+. ||||+++++.+      
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~--------~~~e~~~~~~l~-h~nii~~~~~~------   64 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT--PDEQLL--------FLQEVQPYRELN-HPNVLQCLGQC------   64 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCC--hHHHHH--------HHHHHHHHHhCC-CCCcceEEEEE------
Confidence            58999999999996433  334577777653221  111111        457888899888 99999999998      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhC-CCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKR-GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......+++|||+++|+|.+++...... ....++..++.++.|++.|
T Consensus        65 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~  112 (269)
T cd05042          65 IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASG  112 (269)
T ss_pred             CCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHH
Confidence            6778899999999999999999653321 1235778888999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.54  E-value=1.4e-13  Score=96.96  Aligned_cols=117  Identities=38%  Similarity=0.573  Sum_probs=92.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.+.|+..+.||+|+||.||++.+..++..+++|.+.............        +.+|+.+++.+. |||+++++
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~iv~~~   91 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD--------IIKEVKFLQRIK-HPNSIEYK   91 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHH--------HHHHHHHHHhCC-CCCEEEEE
Confidence            345566889999999999999999988889999999987543222222111        457999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ..+...+++|||+. |++.+++...   +..+++..+..++.|++.|
T Consensus        92 ~~~------~~~~~~~lv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~  137 (317)
T cd06635          92 GCY------LREHTAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAITHGALQG  137 (317)
T ss_pred             EEE------eeCCeEEEEEeCCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence            998      66788999999996 5787777432   2358999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.54  E-value=9.2e-14  Score=95.74  Aligned_cols=106  Identities=21%  Similarity=0.248  Sum_probs=81.2

Q ss_pred             CceEEEEEe--eccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          20 NKFKLQELI--GEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~l--g~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ++|++.+.+  |+|+||.||++..+.++..+++|.+........                |......+..|||++++++.
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----------------e~~~~~~~~~h~~iv~~~~~   77 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----------------EPMVHQLMKDNPNFIKLYYS   77 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----------------hHHHHHHhhcCCCEEEEEEE
Confidence            356666665  999999999999988999999998864321110                11111112239999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++..|++|||+++++|.+++..   . ..+++..++.++.|+++|
T Consensus        78 ~------~~~~~~~iv~e~~~~~~L~~~l~~---~-~~l~~~~~~~~~~qi~~~  121 (267)
T PHA03390         78 V------TTLKGHVLIMDYIKDGDLFDLLKK---E-GKLSEAEVKKIIRQLVEA  121 (267)
T ss_pred             E------ecCCeeEEEEEcCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            9      677899999999999999999853   2 259999999999999876

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.54  E-value=1.5e-13  Score=99.61  Aligned_cols=105  Identities=19%  Similarity=0.225  Sum_probs=85.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..+|.+++.||+|+||.||++....  .+..+++|.+.....                ..+|+.+++.++ ||||+++++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~----------------~~~E~~il~~l~-h~~iv~~~~  153 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT----------------PGREIDILKTIS-HRAIINLIH  153 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccccc----------------HHHHHHHHHhcC-CCCccceee
Confidence            4569999999999999999997643  456788887754211                236889999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      .....+|++||++ +++|.+++.   . ...+++..++.++.|++.|
T Consensus       154 ~~------~~~~~~~lv~e~~-~~~l~~~l~---~-~~~l~~~~~~~i~~ql~~a  197 (392)
T PHA03207        154 AY------RWKSTVCMVMPKY-KCDLFTYVD---R-SGPLPLEQAITIQRRLLEA  197 (392)
T ss_pred             eE------eeCCEEEEEehhc-CCCHHHHHH---h-cCCCCHHHHHHHHHHHHHH
Confidence            98      6778899999999 478888883   2 2359999999999999876

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.54  E-value=1.4e-13  Score=94.88  Aligned_cols=110  Identities=25%  Similarity=0.404  Sum_probs=82.5

Q ss_pred             EEeeccceeEEEEEEEcCCCCe--EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDH--VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~--~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      +.||+|+||.||++....++..  +++|.+..... ......         +..|+.++..+..|||++++++.+     
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~---------~~~E~~~l~~l~~h~~iv~~~~~~-----   65 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRD---------FAGELEVLCKLGHHPNIINLLGAC-----   65 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC-HHHHHH---------HHHHHHHHHhhccCCCeeeEEEEE-----
Confidence            3589999999999998777654  57776653211 111111         447888888885599999999999     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ...+.++++|||+++|+|.+++...+.            ....+++..++.++.|++.|
T Consensus        66 -~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~a  124 (270)
T cd05047          66 -EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  124 (270)
T ss_pred             -ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHH
Confidence             677889999999999999999864221            11247899999999999876

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.53  E-value=1.9e-13  Score=95.20  Aligned_cols=116  Identities=23%  Similarity=0.362  Sum_probs=88.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...+|.+.+.||+|+||.||++....     ++..+++|.+.....  .. ..        .+.+|+.+++.+. |||++
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~-~~--------~~~~e~~~l~~l~-h~~i~   70 (291)
T cd05094           3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL--AA-RK--------DFQREAELLTNLQ-HEHIV   70 (291)
T ss_pred             chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH--HH-HH--------HHHHHHHHHhcCC-CCCcc
Confidence            34579999999999999999997543     334577777653221  11 11        1457899999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+..+++|||+++++|.+++.....            ....+++..++.++.|++.|
T Consensus        71 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a  135 (291)
T cd05094          71 KFYGVC------GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG  135 (291)
T ss_pred             eEEEEE------ccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence            999998      677889999999999999999964321            12348999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.53  E-value=1.4e-14  Score=99.17  Aligned_cols=105  Identities=21%  Similarity=0.264  Sum_probs=79.3

Q ss_pred             EEeeccceeEEEEEEEcCCCCe-------EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDH-------VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~-------~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      +.||+|+||.||++.....+..       +++|.+....   .....        .+..|+.+++.+. |||++++++.+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~--------~~~~e~~~l~~~~-h~~iv~~~~~~   68 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSE--------SFFEAASMMSQLS-HKHLVLNYGVC   68 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHH--------HHHHHHHHHHhCC-CCChhheeeEE
Confidence            3689999999999987654433       6666654221   11111        1446888888888 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ......+++|||+++|+|.++++.   .+..+++..++.++.|++.|
T Consensus        69 ------~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~  112 (258)
T cd05078          69 ------VCGDESIMVQEYVKFGSLDTYLKK---NKNLINISWKLEVAKQLAWA  112 (258)
T ss_pred             ------EeCCCcEEEEecCCCCcHHHHHhc---CCCCCCHHHHHHHHHHHHHH
Confidence                  566779999999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.53  E-value=1.1e-13  Score=94.66  Aligned_cols=105  Identities=29%  Similarity=0.474  Sum_probs=85.3

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||++.+..+++.+++|.+.............        +.+|+.+++.+. |||++++++.+      ...
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~--------~~~e~~~l~~~~-h~~i~~~~~~~------~~~   65 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQ--------VLTERDILSQAQ-SPYVVKLYYSF------QGK   65 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHH--------HHHHHHHHHhCC-CcchhHHHHhe------ecC
Confidence            689999999999998889999999886532211111111        457889999998 99999999988      678


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...|+++||+++++|.+++...   + .+++..+..++.|+++|
T Consensus        66 ~~~~lv~e~~~~~~L~~~l~~~---~-~~~~~~~~~i~~qi~~~  105 (265)
T cd05579          66 KNLYLVMEYLPGGDLASLLENV---G-SLDEDVARIYIAEIVLA  105 (265)
T ss_pred             cEEEEEEecCCCCcHHHHHHHc---C-CCCHHHHHHHHHHHHHH
Confidence            8899999999999999998532   2 58999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0604|consensus

Probab=99.53  E-value=3.1e-15  Score=101.91  Aligned_cols=115  Identities=21%  Similarity=0.276  Sum_probs=93.2

Q ss_pred             CCCceEEE-EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          18 PRNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..++|++. ++||-|.-|+|..|.++.+++.+|+|++..+.    +            ..+|+.+.-....|||||++++
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----K------------ARrEVeLHw~~s~h~~iV~Iid  122 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----K------------ARREVELHWMASGHPHIVSIID  122 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----H------------HHhHhhhhhhhcCCCceEEeeh
Confidence            45677764 47999999999999999999999999876432    1            2367777777777999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +|-++-  .....+.+|||.++||+|++.++..+  ..+|+|.++..|+.||+.|.
T Consensus       123 VyeNs~--~~rkcLLiVmE~meGGeLfsriq~~g--~~afTErea~eI~~qI~~Av  174 (400)
T KOG0604|consen  123 VYENSY--QGRKCLLIVMECMEGGELFSRIQDRG--DQAFTEREASEIMKQIGLAV  174 (400)
T ss_pred             hhhhhc--cCceeeEeeeecccchHHHHHHHHcc--cccchHHHHHHHHHHHHHHH
Confidence            985533  45678999999999999999997543  34699999999999999873

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.53  E-value=1.8e-13  Score=93.62  Aligned_cols=104  Identities=23%  Similarity=0.376  Sum_probs=80.3

Q ss_pred             EeeccceeEEEEEEE--cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKD--VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~--~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      .||+|+||.||++..  ..++..+|+|.++..... .....+        +..|+.+++.+. |||++++++.+      
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~------   65 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-PALKDE--------LLREANVMQQLD-NPYIVRMIGIC------   65 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-HHHHHH--------HHHHHHHHHhCC-CCCcceEEEEE------
Confidence            589999999999965  345678999988643221 111111        457889999998 99999999887      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      + ....+++|||+++|+|.++++.   . ..+++..+..++.|++.|
T Consensus        66 ~-~~~~~lv~e~~~~~~L~~~l~~---~-~~~~~~~~~~i~~qi~~a  107 (257)
T cd05116          66 E-AESWMLVMELAELGPLNKFLQK---N-KHVTEKNITELVHQVSMG  107 (257)
T ss_pred             c-CCCcEEEEecCCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            3 4567999999999999999852   2 258999999999999876

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.53  E-value=4.5e-13  Score=95.17  Aligned_cols=116  Identities=26%  Similarity=0.362  Sum_probs=88.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+...... .....         +.+|+.+++.+. |||++++++.
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~---------~~~E~~~l~~l~-h~niv~~~~~   71 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ-TFCQR---------TLREIKILRRFK-HENIIGILDI   71 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccc-hhHHH---------HHHHHHHHHhCC-CCCcCchhhe
Confidence            347899999999999999999999889999999988632111 11111         447999999998 9999999987


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..... .....+|+++||+. ++|.+++.   .  ..+++..++.++.|+++|
T Consensus        72 ~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~---~--~~l~~~~~~~i~~ql~~a  118 (336)
T cd07849          72 IRPPSF-ESFNDVYIVQELME-TDLYKLIK---T--QHLSNDHIQYFLYQILRG  118 (336)
T ss_pred             eecccc-cccceEEEEehhcc-cCHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            632211 23456899999995 57777663   2  259999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0577|consensus

Probab=99.52  E-value=2.6e-15  Score=110.40  Aligned_cols=116  Identities=40%  Similarity=0.613  Sum_probs=95.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCC-CchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP-ENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .++..-|.-+..||-|+||.||-+.+..++..||||.+.-+. ...+++..         +.+|+..+.++. |||++.+
T Consensus        22 ~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqD---------IlKEVrFL~~l~-HPntieY   91 (948)
T KOG0577|consen   22 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD---------ILKEVRFLRQLR-HPNTIEY   91 (948)
T ss_pred             CCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHH---------HHHHHHHHHhcc-CCCcccc
Confidence            345566888889999999999999999999999999997443 33344433         568999999999 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      -++|      -.+...|+||||| -|+..|++..+++   ++.+..+.-|..+.+.+
T Consensus        92 kgCy------Lre~TaWLVMEYC-lGSAsDlleVhkK---plqEvEIAAi~~gaL~g  138 (948)
T KOG0577|consen   92 KGCY------LREHTAWLVMEYC-LGSASDLLEVHKK---PLQEVEIAAITHGALQG  138 (948)
T ss_pred             ccee------eccchHHHHHHHH-hccHHHHHHHHhc---cchHHHHHHHHHHHHHH
Confidence            9999      4677899999999 6788999976544   69999998888877654

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.52  E-value=1.6e-13  Score=94.96  Aligned_cols=111  Identities=37%  Similarity=0.569  Sum_probs=88.3

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|++|.||++....+++.+++|.+...........          ..+|+..+..+.+|||++++++.+   
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~----------~~~e~~~l~~~~~h~~i~~~~~~~---   67 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECM----------NLREVKSLRKLNEHPNIVKLKEVF---   67 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHH----------HHHHHHHHHhccCCCCchhHHHHh---
Confidence            6788999999999999999988889999998864322111111          235778888887799999999999   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...+..+++|||+ +|+|.+++....  +..+++..+..++.|+++|
T Consensus        68 ---~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~  111 (283)
T cd07830          68 ---RENDELYFVFEYM-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQG  111 (283)
T ss_pred             ---hcCCcEEEEEecC-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHH
Confidence               6788999999999 889988885322  2358999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.52  E-value=1.1e-13  Score=96.85  Aligned_cols=112  Identities=33%  Similarity=0.586  Sum_probs=90.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .++..|.....||+|+||.||++.+..+++.+++|.+..........           +.+|+.++..+. |||++++++
T Consensus        18 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~-----------~~~e~~~l~~l~-hp~i~~~~~   85 (297)
T cd06659          18 DPRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRREL-----------LFNEVVIMRDYQ-HQNVVEMYK   85 (297)
T ss_pred             cchhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHH-----------HHHHHHHHHhCC-CCchhhhhh
Confidence            34556667778999999999999988889999999986432211111           446888899998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..|+++||+++++|.+++.   .  ..+++..++.++.|++.|
T Consensus        86 ~~------~~~~~~~iv~e~~~~~~L~~~~~---~--~~~~~~~~~~~~~qi~~~  129 (297)
T cd06659          86 SY------LVGEELWVLMEFLQGGALTDIVS---Q--TRLNEEQIATVCESVLQA  129 (297)
T ss_pred             he------eeCCeEEEEEecCCCCCHHHHHh---h--cCCCHHHHHHHHHHHHHH
Confidence            98      67788999999999999988773   2  248999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.51  E-value=2.7e-13  Score=94.97  Aligned_cols=113  Identities=21%  Similarity=0.369  Sum_probs=86.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|+..+.||+|+||.||++.+..++.    .+|+|.+......  ....+        +.+|+.+++.+. |||+++
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~--------~~~e~~~~~~l~-h~niv~   73 (303)
T cd05110           5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP--KANVE--------FMDEALIMASMD-HPHLVR   73 (303)
T ss_pred             chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH--HHHHH--------HHHHHHHHHhCC-CCCccc
Confidence            45678999999999999999999876665    4677776542211  11111        457889999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      .. ...++++||+++|+|.+++..   ....+++..++.++.|++.|
T Consensus        74 ~~~~~------~~-~~~~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~  121 (303)
T cd05110          74 LLGVC------LS-PTIQLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKG  121 (303)
T ss_pred             EEEEE------cC-CCceeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            99988      33 346799999999999999853   22358999999999999876

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.51  E-value=2.3e-13  Score=94.30  Aligned_cols=116  Identities=24%  Similarity=0.355  Sum_probs=88.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...+|.+.+.||+|+||.||++...     .++..+++|.+.....   .....        +.+|+.++..+. |+||+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~--------~~~e~~~l~~l~-h~~i~   70 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE---SARQD--------FQREAELLTVLQ-HQHIV   70 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH---HHHHH--------HHHHHHHHhcCC-CCCCc
Confidence            4567899999999999999999642     2455688887653221   11111        557899999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-----------CCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-----------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ......+++|||+++|+|.+++......           ...+++..++.++.|++.|
T Consensus        71 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  134 (280)
T cd05092          71 RFYGVC------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASG  134 (280)
T ss_pred             eEEEEE------ecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHH
Confidence            999988      5677899999999999999999643210           1248899999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0599|consensus

Probab=99.51  E-value=1e-14  Score=98.57  Aligned_cols=117  Identities=24%  Similarity=0.353  Sum_probs=94.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc--hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN--IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..|...+.||.|..+.|-+|.++.++..+|+|+|......  .+........     ..+|+.+++++.+||+|+++.+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~Ea-----T~~Ev~ILRqv~GHP~II~l~D~   91 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREA-----TRQEISILRQVMGHPYIIDLQDV   91 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHH-----HHHHHHHHHHhcCCCcEEEeeee
Confidence            4677888999999999999999999999999998743221  1111111111     34799999999999999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |      +++..+++|+|.|+.|.|+|++..    ...+|+..++.+|.|+.++
T Consensus        92 y------es~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfeg  135 (411)
T KOG0599|consen   92 Y------ESDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEG  135 (411)
T ss_pred             c------cCcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHH
Confidence            9      999999999999999999999942    3469999999999999764

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.51  E-value=3.9e-13  Score=94.64  Aligned_cols=108  Identities=24%  Similarity=0.457  Sum_probs=82.2

Q ss_pred             EEEeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          25 QELIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      ...||+|+||.||++.++.  ++..+|+|.+.......             ...+|+.+++.+. ||||+++++.+..  
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~-------------~~~~E~~~l~~l~-h~niv~~~~~~~~--   69 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISM-------------SACREIALLRELK-HPNVISLQKVFLS--   69 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcH-------------HHHHHHHHHHhcC-CCCCcceeeeEec--
Confidence            3579999999999998653  56789999886432111             1347999999998 9999999998843  


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhh-----CCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKK-----RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~l~~~~~~~~~~qi~~a  151 (152)
                        .....+|++|||+ +++|.+++.....     ....+++..++.++.|++.|
T Consensus        70 --~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  120 (317)
T cd07868          70 --HADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG  120 (317)
T ss_pred             --CCCcEEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHH
Confidence              3456799999999 5688888754221     12258999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.51  E-value=5.6e-13  Score=93.03  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=90.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +....++|++.+.||+|+||.||++.+..++..+|+|.++....... . ..        +..|..++....+|||++++
T Consensus        10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-~-~~--------~~~e~~~~~~~~~~~~i~~~   79 (296)
T cd06618          10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEE-N-KR--------ILMDLDVVLKSHDCPYIVKC   79 (296)
T ss_pred             ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHH-H-HH--------HHHHHHHHHhccCCCchHhh
Confidence            45566789999999999999999999988899999999875432211 1 11        33466656666569999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ......|++|||+ ++++.+++...   ...+++..+..++.|+++|
T Consensus        80 ~~~~------~~~~~~~~v~e~~-~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~  126 (296)
T cd06618          80 YGYF------ITDSDVFICMELM-STCLDKLLKRI---QGPIPEDILGKMTVAIVKA  126 (296)
T ss_pred             heee------ecCCeEEEEeecc-CcCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence            9999      6778899999998 55777777432   2268999999999999875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0199|consensus

Probab=99.51  E-value=1.2e-14  Score=108.51  Aligned_cols=115  Identities=26%  Similarity=0.401  Sum_probs=91.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC-CC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET-GD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ++.++..+.+.||+|.||.|+.+.+... |+  .||||+++......  ...        .|.+|+.+|.++. |+|+++
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~md--------dflrEas~M~~L~-H~hliR  175 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMD--------DFLREASHMLKLQ-HPHLIR  175 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHH--------HHHHHHHHHHhcc-CcceeE
Confidence            5566778889999999999999988654 33  48999998654332  111        1668999999999 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||++.+       +....||+|+++.|+|.+-|+.  .....|....+..|+.||+.|
T Consensus       176 LyGvVl-------~qp~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~a  224 (1039)
T KOG0199|consen  176 LYGVVL-------DQPAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKA  224 (1039)
T ss_pred             Eeeeec-------cchhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHH
Confidence            999993       3669999999999999999965  233468999999999999876

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.51  E-value=1.3e-13  Score=94.84  Aligned_cols=108  Identities=22%  Similarity=0.396  Sum_probs=82.2

Q ss_pred             EeeccceeEEEEEEEcCCC------CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          27 LIGEGTYGEVYWAKDVETG------DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~------~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .||+|+||.||++......      ..+++|.+...... .....         +.+|+.+++.+. ||||+++++.+  
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~--   68 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-QEKKE---------FLKEAHLMSNFN-HPNIVKLLGVC--   68 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccch-hhHHH---------HHHHHHHHHhcC-CCCeeeEeeee--
Confidence            5899999999999875433      56888877542211 11111         557899999998 99999999998  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhh---CCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++.....   ....+++..+..++.|++.|
T Consensus        69 ----~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~  118 (269)
T cd05044          69 ----LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKG  118 (269)
T ss_pred             ----cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHH
Confidence                677789999999999999999964332   12347889999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.50  E-value=9.5e-14  Score=96.88  Aligned_cols=112  Identities=34%  Similarity=0.579  Sum_probs=90.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.+.|.....||+|+||.||++.+..++..+|+|.+.....  ....    .     +.+|+.+++.+. |||++++++
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--~~~~----~-----~~~e~~~l~~l~-h~~ii~~~~   86 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--QRRE----L-----LFNEVVIMRDYH-HENVVDMYN   86 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchH--HHHH----H-----HHHHHHHHHhCC-CCcHHHHHH
Confidence            345667777889999999999999888899999998864221  1111    1     457888999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++++|.+++.   .  ..+++..+..++.||+.|
T Consensus        87 ~~------~~~~~~~lv~e~~~~~~L~~~~~---~--~~l~~~~~~~~~~qi~~~  130 (292)
T cd06658          87 SY------LVGDELWVVMEFLEGGALTDIVT---H--TRMNEEQIATVCLSVLRA  130 (292)
T ss_pred             he------ecCCeEEEEEeCCCCCcHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            98      67788999999999999988873   2  248999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG1290|consensus

Probab=99.50  E-value=2.9e-13  Score=97.46  Aligned_cols=117  Identities=18%  Similarity=0.302  Sum_probs=92.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-------CC
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-------PN   90 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-------~~   90 (152)
                      ...+|.+.+.||=|.|+.||++.+....+.||+|+++......+.            ...|+.+++++..+       .+
T Consensus        76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEa------------AlDEIklL~~v~~~Dp~~~~~~~  143 (590)
T KOG1290|consen   76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEA------------ALDEIKLLQQVREGDPNDPGKKC  143 (590)
T ss_pred             cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHH------------HHHHHHHHHHHHhcCCCCCCCce
Confidence            347899999999999999999999999999999998754332232            23577777765432       47


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+|++.|--++  ....++|||+|++ |.+|..+|+...-+  .++...++.|++||+.+
T Consensus       144 VV~LlD~FkhsG--pNG~HVCMVfEvL-GdnLLklI~~s~Yr--Glpl~~VK~I~~qvL~G  199 (590)
T KOG1290|consen  144 VVQLLDHFKHSG--PNGQHVCMVFEVL-GDNLLKLIKYSNYR--GLPLSCVKEICRQVLTG  199 (590)
T ss_pred             eeeeeccceecC--CCCcEEEEEehhh-hhHHHHHHHHhCCC--CCcHHHHHHHHHHHHHH
Confidence            999999995444  5678999999999 88999999753333  49999999999999865

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.50  E-value=6.4e-13  Score=94.65  Aligned_cols=116  Identities=20%  Similarity=0.325  Sum_probs=88.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ...+|.+.+.||.|+||.||++.+..++..+++|.+......  ...         .+.+|+.+++.+. |||++++++.
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~--~~~---------~~~~Ei~~l~~l~-h~~i~~~~~~   70 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ--SVK---------HALREIKIIRRLD-HDNIVKVYEV   70 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc--hHH---------HHHHHHHHHHhcC-CCcchhhHhh
Confidence            357899999999999999999999889999999988653321  111         1457899999998 9999999987


Q ss_pred             eeecCC--------CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGG--------QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~--------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.....        .......|++|||++ ++|.+++.   .  ..+++..++.++.||++|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~--~~l~~~~~~~~~~qi~~a  126 (342)
T cd07854          71 LGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLE---Q--GPLSEEHARLFMYQLLRG  126 (342)
T ss_pred             hcccccccccccccccccceEEEEeeccc-ccHHHHHH---c--CCCCHHHHHHHHHHHHHH
Confidence            632110        011246899999996 58877773   2  248999999999999886

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.50  E-value=2.6e-13  Score=92.25  Aligned_cols=105  Identities=22%  Similarity=0.374  Sum_probs=85.2

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|+||.||.+.+..+++.+++|.+.............        +..|+.+++.+. |||++++++.+      +..
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~~~------~~~   65 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEH--------TLTERNILSRIN-HPFIVKLHYAF------QTE   65 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHH--------HHHHHHHHHHcC-CCcHHHHHHHe------ecC
Confidence            689999999999998889999999987543221111111        457888999998 99999999998      788


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.++++|||+++++|.+++...    ..+++..+..++.|+++|
T Consensus        66 ~~~~~v~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~  105 (250)
T cd05123          66 EKLYLVLEYAPGGELFSHLSKE----GRFSEERARFYAAEIVLA  105 (250)
T ss_pred             CeeEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            8999999999999999998532    258999999999999876

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.50  E-value=4.4e-13  Score=91.68  Aligned_cols=104  Identities=20%  Similarity=0.270  Sum_probs=81.0

Q ss_pred             EEeeccceeEEEEEEEcCCC---CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDVETG---DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~---~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|+||.||++.+...+   ..+++|.+......  .....        +..|+.+++.+. |||++++++.+    
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~--------~~~e~~~l~~l~-h~~iv~~~~~~----   65 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKE--------FLREASVMAQLD-HPCIVRLIGVC----   65 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHH--------HHHHHHHHHhcC-CCCeeeEEEEE----
Confidence            36899999999999876544   67999988754322  11111        457889999998 99999999977    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        . .+..+++|||+++|+|.+++...    ..+++..+..++.|++.|
T Consensus        66 --~-~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  107 (257)
T cd05060          66 --K-GEPLMLVMELAPLGPLLKYLKKR----REIPVSDLKELAHQVAMG  107 (257)
T ss_pred             --c-CCceEEEEEeCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHH
Confidence              3 44689999999999999999532    258999999999999876

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.50  E-value=4e-13  Score=91.46  Aligned_cols=105  Identities=25%  Similarity=0.436  Sum_probs=83.6

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|+||.||++.+.. ++.+++|.+......  ....        .+..|+.+++.+. |||++++++.+      .
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~--------~~~~e~~~l~~l~-~~~i~~~~~~~------~   62 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKR--------KFLQEAEILKQYD-HPNIVKLIGVC------V   62 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHH--------HHHHHHHHHHhCC-CCCeEEEEEEE------e
Confidence            368999999999999866 889999988653322  1111        1457899999998 99999999998      6


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .....+++|||+++++|.++++.   ....+++..+..++.|++.|
T Consensus        63 ~~~~~~~v~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~  105 (251)
T cd05041          63 QKQPIYIVMELVPGGSLLTFLRK---KKNRLTVKKLLQMSLDAAAG  105 (251)
T ss_pred             cCCCeEEEEEcCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            77889999999999999999853   22358899999999888765

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.50  E-value=2.8e-13  Score=93.07  Aligned_cols=105  Identities=17%  Similarity=0.204  Sum_probs=78.3

Q ss_pred             EEeeccceeEEEEEEEcCC------------CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          26 ELIGEGTYGEVYWAKDVET------------GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~------------~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      +.||+|+||.||++.....            ...+++|.+....   .....        .+..|+.++..+. ||||++
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~--------~~~~~~~~l~~l~-hp~iv~   68 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISL--------AFFETASMMRQVS-HKHIVL   68 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHH--------HHHHHHHHHHhCC-CCCEee
Confidence            3689999999999975321            1246777654321   11111        1456888889998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ......+++|||+++|+|..++..   ....+++..++.++.||++|
T Consensus        69 ~~~~~------~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~  117 (262)
T cd05077          69 LYGVC------VRDVENIMVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASA  117 (262)
T ss_pred             EEEEE------ecCCCCEEEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            99998      567778999999999999888742   23358999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0579|consensus

Probab=99.49  E-value=1.9e-15  Score=112.14  Aligned_cols=116  Identities=32%  Similarity=0.582  Sum_probs=93.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++++.|.++..||.|+||+||++..+.++-..|.|.|...  ..++.. .        +.-|+.++.... ||+|++|+
T Consensus        28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELE-D--------ylVEIeILa~Cd-HP~ivkLl   95 (1187)
T KOG0579|consen   28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELE-D--------YLVEIEILAECD-HPVIVKLL   95 (1187)
T ss_pred             CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHh-h--------hhhhhhhhhcCC-ChHHHHHH
Confidence            46778899999999999999999998877777788887631  112222 2        345899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +.|      -.++.+||+.|||.||-....+-.+   +..|.++++..+++|+|.|+
T Consensus        96 ~ay------y~enkLwiliEFC~GGAVDaimlEL---~r~LtE~QIqvvc~q~ldAL  143 (1187)
T KOG0579|consen   96 SAY------YFENKLWILIEFCGGGAVDAIMLEL---GRVLTEDQIQVVCYQVLDAL  143 (1187)
T ss_pred             HHH------hccCceEEEEeecCCchHhHHHHHh---ccccchHHHHHHHHHHHHHH
Confidence            998      5788899999999999887776433   33699999999999999874

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.49  E-value=8.2e-13  Score=91.47  Aligned_cols=117  Identities=26%  Similarity=0.309  Sum_probs=83.7

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceeeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFYGLYL   99 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~~~~~   99 (152)
                      |++.+.||+|+||.||++.++.++..+|+|.+............         +.+|+.++..+.  .|||++++++.+.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------~~~e~~~l~~l~~~~h~~i~~~~~~~~   71 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLS---------TLREIALLKQLESFEHPNIVRLLDVCH   71 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhh---------HHHHHHHHHHhhccCCCCcceEEEEEe
Confidence            67889999999999999999888999999998743322111111         234666555442  2999999999984


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .... .....++++|||+. ++|.+++.....  ..+++..++.++.|+++|
T Consensus        72 ~~~~-~~~~~~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~a  119 (287)
T cd07838          72 GPRT-DRELKLTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRG  119 (287)
T ss_pred             eccC-CCCceeEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHH
Confidence            3211 11223999999996 588888854222  258999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.49  E-value=2.7e-13  Score=94.18  Aligned_cols=115  Identities=23%  Similarity=0.313  Sum_probs=88.1

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|...+.||+|+||.||++.+..+++.+|+|.+...... .. ..        .+.+|+.++..+.+||||+++++.+ 
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~-~~--------~~~~e~~~l~~~~~~~~iv~~~~~~-   72 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KE-QK--------RLLMDLDVVMRSSDCPYIVKFYGAL-   72 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HH-HH--------HHHHHHHHHHHhcCCCCEeeeeeEE-
Confidence            4667778899999999999999989999999988753322 11 11        1457888888886699999999988 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhh-hCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMK-KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++..+++|||+. +++.++..... ..+..+++..+..++.|+++|
T Consensus        73 -----~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~  119 (288)
T cd06616          73 -----FREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKA  119 (288)
T ss_pred             -----ecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence                 56788999999984 57766654322 223469999999999999876

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.49  E-value=9.6e-13  Score=92.67  Aligned_cols=115  Identities=36%  Similarity=0.554  Sum_probs=89.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +.+-|...+.||+|+||.||++.+..++..+++|.+.............        +..|+.+++.+. |||++++++.
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-h~~iv~~~~~   89 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQD--------IIKEVKFLQQLK-HPNTIEYKGC   89 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHH--------HHHHHHHHHhCC-CCCCccEEEE
Confidence            3445777888999999999999988889999999987533222211111        457889999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......|++|||+. |++.+++..   .+..+++..+..++.|++.|
T Consensus        90 ~------~~~~~~~lv~e~~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~a  133 (313)
T cd06633          90 Y------LKEHTAWLVMEYCL-GSASDLLEV---HKKPLQEVEIAAITHGALQG  133 (313)
T ss_pred             E------EeCCEEEEEEecCC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            9      67788999999995 678777742   23358999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0666|consensus

Probab=99.49  E-value=1.3e-14  Score=99.45  Aligned_cols=118  Identities=22%  Similarity=0.397  Sum_probs=92.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      .....|+.+..||+|.+|.||++....++.    .+|+|.++...........         ..+|+.+++.+. |||++
T Consensus        21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~S---------AcREiaL~REl~-h~nvi   90 (438)
T KOG0666|consen   21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMS---------ACREIALLRELK-HPNVI   90 (438)
T ss_pred             HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHH---------HHHHHHHHHHhc-CCcch
Confidence            344579999999999999999996554432    5788888754332222222         558999999999 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-CCCCCHHHHHHHHHhhhc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-GVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~l~~~~~~~~~~qi~~  150 (152)
                      .+..+|+     +.+..+++++||.+ .||+..++.++.. ...++...++.++.||+.
T Consensus        91 ~Lv~Vfl-----~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~  143 (438)
T KOG0666|consen   91 SLVKVFL-----SHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILD  143 (438)
T ss_pred             hHHHHHh-----ccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHh
Confidence            9999996     45889999999996 5899988766543 246999999999999975

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.49  E-value=3.2e-13  Score=92.27  Aligned_cols=106  Identities=21%  Similarity=0.290  Sum_probs=82.9

Q ss_pred             EEeeccceeEEEEEEEcC-CCC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDVE-TGD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~-~~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|++|.||++.+.. .++  .+|+|.++.....  .....        +.+|+.+++.++ |||++++++.+    
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~--------~~~e~~~l~~l~-h~~iv~~~~~~----   65 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDD--------FLKEAAIMHSLD-HENLIRLYGVV----   65 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHH--------HHHHHHHHhhcC-CCCccceeEEE----
Confidence            368999999999998755 333  5899988754332  11111        557999999998 99999999998    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        .. ...+++|||+++|+|.+++.....  ..+++..++.++.|+++|
T Consensus        66 --~~-~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~  109 (257)
T cd05040          66 --LT-HPLMMVTELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANG  109 (257)
T ss_pred             --cC-CeEEEEEEecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHH
Confidence              45 889999999999999999854221  358999999999999876

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.49  E-value=9.9e-13  Score=91.41  Aligned_cols=109  Identities=35%  Similarity=0.551  Sum_probs=88.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ..|...+.||+|++|.||++.+..+++.+++|.+......  ....         +.+|+.+++.+. |||++++++.+ 
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~---------~~~e~~~l~~~~-h~~vv~~~~~~-   85 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ--RREL---------LFNEVVIMRDYQ-HPNIVEMYSSY-   85 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchh--HHHH---------HHHHHHHHHHcC-CCChheEEEEE-
Confidence            4667778999999999999998888999999987632211  1111         447888999998 99999999998 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...++.++++||+++++|.+++..     ..+++..+..++.|++.|
T Consensus        86 -----~~~~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~  127 (285)
T cd06648          86 -----LVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKA  127 (285)
T ss_pred             -----EcCCeEEEEEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHH
Confidence                 677889999999999999998853     248999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.48  E-value=6e-13  Score=94.86  Aligned_cols=119  Identities=23%  Similarity=0.427  Sum_probs=89.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++...||+|++|.||++.+..++..+|+|.+.......... ..        +.+|+.+++.+. |||++++.+
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~--------~~~E~~~l~~l~-h~~iv~~~~   81 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHA-KR--------TYRELRLLKHMD-HENVIGLLD   81 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHH-HH--------HHHHHHHHHhcc-CCCHHHHHH
Confidence            34568999999999999999999998889999999876432111111 11        446889999997 999999988


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+............++++||+ +++|.+++..     ..+++..++.++.|+++|
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~a  130 (343)
T cd07851          82 VFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRG  130 (343)
T ss_pred             HhhccccccccccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHH
Confidence            773211101123499999999 7799888842     259999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.48  E-value=5.5e-13  Score=94.36  Aligned_cols=115  Identities=28%  Similarity=0.481  Sum_probs=87.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +|++.+.||+|++|.||++.+..++..+++|.+............         +.+|+.+++.++ ||||+++.+++..
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-~~~i~~~~~~~~~   70 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKR---------ILREIKLLRHLR-HENIIGLLDILRP   70 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhh---------HHHHHHHHHhcC-Ccchhhhhhhhcc
Confidence            588999999999999999998888999999988753221111111         457899999998 9999999998832


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ... .....+|++|||+. ++|.+++.   .. ..+++..++.++.|++.|
T Consensus        71 ~~~-~~~~~~~lv~e~~~-~~l~~~l~---~~-~~l~~~~~~~i~~~l~~~  115 (330)
T cd07834          71 PSP-EDFNDVYIVTELME-TDLHKVIK---SP-QPLTDDHIQYFLYQILRG  115 (330)
T ss_pred             cCc-ccccceEEEecchh-hhHHHHHh---CC-CCCCHHHHHHHHHHHHHH
Confidence            111 12247999999996 57877773   22 269999999999999876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.48  E-value=6.6e-13  Score=94.24  Aligned_cols=122  Identities=25%  Similarity=0.338  Sum_probs=89.6

Q ss_pred             CCCceE-EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh--HHHHHHH-hhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFK-LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE--IEEEYLV-LKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~-~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~--~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|. +.+.||+|+||.||++.+..+++.+|+|.+.........  ..+.... .....+.+|+.++..+. |||+++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~   84 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMG   84 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-Ccceee
Confidence            345665 457799999999999999888999999998643222100  0000000 00011457999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ...+..+++|||+. |+|.+++..    ...+++..+..++.|++.|
T Consensus        85 ~~~~~------~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~a  131 (335)
T PTZ00024         85 LVDVY------VEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNG  131 (335)
T ss_pred             eeEEE------ecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            99999      67789999999996 688888842    2358999999999999876

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.47  E-value=1.3e-12  Score=91.86  Aligned_cols=107  Identities=22%  Similarity=0.459  Sum_probs=81.0

Q ss_pred             EEeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          26 ELIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      ..||+|+||.||++....  ++..+|+|.+.......             .+.+|+.+++.+. ||||+++++++..   
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~-------------~~~~E~~~l~~l~-h~niv~~~~~~~~---   69 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISM-------------SACREIALLRELK-HPNVIALQKVFLS---   69 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcH-------------HHHHHHHHHHhCC-CCCeeeEEEEEec---
Confidence            579999999999998654  45789999886432110             1347899999998 9999999998853   


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhh-----CCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKK-----RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ..+..++++|||++ ++|.+++.....     ....+++..++.++.|++.|
T Consensus        70 -~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  120 (317)
T cd07867          70 -HSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG  120 (317)
T ss_pred             -cCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH
Confidence             34567999999985 688888753221     12248899999999999876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.47  E-value=6.2e-13  Score=91.90  Aligned_cols=110  Identities=34%  Similarity=0.471  Sum_probs=87.6

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|++|.||++....++..+++|.+...........         .+.+|+.+++.+. |++++++++.+   
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~---------~~~~e~~~l~~l~-~~~i~~~~~~~---   67 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPK---------TALREIKLLKELN-HPNIIKLLDVF---   67 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHH---------HHHHHHHHHHHhc-CCCcchHHHhh---
Confidence            5678899999999999999888899999998865332211111         1457889999998 99999999998   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...+.+++++||++ +++.+++..   ....+++..+..++.|+++|
T Consensus        68 ---~~~~~~~~v~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~~i~~~  110 (283)
T cd05118          68 ---RHKGDLYLVFEFMD-TDLYKLIKD---RQRGLPESLIKSYLYQLLQG  110 (283)
T ss_pred             ---ccCCCEEEEEeccC-CCHHHHHHh---hcccCCHHHHHHHHHHHHHH
Confidence               67788999999996 488887753   22358999999999999876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.47  E-value=1.8e-12  Score=91.94  Aligned_cols=115  Identities=23%  Similarity=0.388  Sum_probs=85.7

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCC--CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVET--GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~--~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      +|++.+.||+|+||.||++.+...  +..+|+|.+............         +.+|+.+++.+.+||||+++++..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~~h~~iv~~~~~~   71 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKR---------ALRELKLLRHFRGHKNITCLYDMD   71 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHH---------HHHHHHHHHHhcCCCChheeeeee
Confidence            488999999999999999998877  888999988643221111111         346888888886699999999875


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ....  ......|+++|++. ++|.+++..    +..+++..++.++.|++.|
T Consensus        72 ~~~~--~~~~~~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~a  117 (332)
T cd07857          72 IVFP--GNFNELYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCG  117 (332)
T ss_pred             eecc--ccCCcEEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHH
Confidence            3211  23356899999984 688888742    2358999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.47  E-value=4.5e-13  Score=91.49  Aligned_cols=103  Identities=18%  Similarity=0.221  Sum_probs=78.8

Q ss_pred             EEeeccceeEEEEEEEcCCC----------CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          26 ELIGEGTYGEVYWAKDVETG----------DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~----------~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      +.||+|+||.||++.+..++          ..+++|.+......   ..         .+.+|+.+++.+. |||+++++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~---------~~~~e~~~l~~l~-h~~i~~~~   67 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SL---------AFFETASLMSQLS-HKHLVKLY   67 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HH---------HHHHHHHHHHcCC-Ccchhhee
Confidence            36899999999999987665          23666655432111   11         1457888999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      .. ...+++|||+++|+|.++++...   ..+++..+..++.|++.|
T Consensus        68 ~~~------~~-~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~  113 (259)
T cd05037          68 GVC------VR-DENIMVEEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASA  113 (259)
T ss_pred             eEE------ec-CCcEEEEEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHH
Confidence            988      34 66899999999999999985422   258999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.47  E-value=7.4e-13  Score=93.02  Aligned_cols=116  Identities=37%  Similarity=0.583  Sum_probs=90.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+...|+..+.||+|+||.||++.+..++..+++|.+.............        +.+|+.+++.+. |+|++++.+
T Consensus        12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~~~~~   82 (308)
T cd06634          12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD--------IIKEVRFLQKLR-HPNTIQYRG   82 (308)
T ss_pred             CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHH--------HHHHHHHHHhCC-CCCcccEEE
Confidence            35667888899999999999999998888999999886432222111111        447899999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ......+++|||+. |++.+++..   .+..+++..+..++.|++.|
T Consensus        83 ~~------~~~~~~~lv~e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~  127 (308)
T cd06634          83 CY------LREHTAWLVMEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQG  127 (308)
T ss_pred             EE------EcCCeeEEEEEccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHH
Confidence            98      56788999999995 688777742   22358999999999998865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.46  E-value=2.8e-13  Score=93.83  Aligned_cols=115  Identities=23%  Similarity=0.384  Sum_probs=87.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .+|.+.+.||+|+||.||++....+     +..+|+|.+.....  ......        +.+|+.++..+. ||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~--------~~~e~~~~~~l~-h~~iv~~   73 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE--GPLREE--------FKHEAMMRSRLQ-HPNIVCL   73 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC--HHHHHH--------HHHHHHHHhcCC-CCCcCeE
Confidence            4678888999999999999986432     46799998864321  111111        457888999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh------------hCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK------------KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+..++++||+.+++|.+++....            ..+..+++..+..++.|++.|
T Consensus        74 ~~~~------~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~a  136 (283)
T cd05091          74 LGVV------TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAG  136 (283)
T ss_pred             EEEE------cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence            9998      67788999999999999999984211            112248888999999999876

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.46  E-value=1.5e-12  Score=89.69  Aligned_cols=120  Identities=19%  Similarity=0.310  Sum_probs=85.8

Q ss_pred             eEEEEEeeccceeEEEEEEEcC---CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVE---TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      |.+.+.||+|+||.||++....   ++..+|+|.+............         +.+|+.+++.+. |||++++++.+
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~i~~~~~~~   70 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEE---------FLREAACMKEFD-HPNVIKLIGVS   70 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHH---------HHHHHHHHhcCC-CCCcceEEEEE
Confidence            5678899999999999998653   4678999988754332222211         457999999998 99999999987


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhh--hCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK--KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ............++++||+.+|+|.+++....  .....+++..++.++.|++.|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~  125 (273)
T cd05074          71 LRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG  125 (273)
T ss_pred             ccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Confidence            43211011123578999999999988874322  122357899999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.46  E-value=6e-13  Score=91.94  Aligned_cols=110  Identities=33%  Similarity=0.489  Sum_probs=88.3

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |+..+.||+|++|.||++....+++.+++|.+....... .....        +..|+.+++.+. |+|++++++.+   
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~--------~~~e~~~l~~~~-~~~i~~~~~~~---   67 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE-GIPST--------ALREISLLKELK-HPNIVKLLDVI---   67 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccc-cccHH--------HHHHHHHHHhcC-CCCHHHHHhhh---
Confidence            567789999999999999998889999999987543111 11111        346888999998 99999999998   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...+..++++||++ ++|.+++....   ..+++..+..++.|++.|
T Consensus        68 ---~~~~~~~~v~e~~~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~  110 (282)
T cd07829          68 ---HTERKLYLVFEYCD-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRG  110 (282)
T ss_pred             ---hcCCceEEEecCcC-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHH
Confidence               66788999999996 68999985422   359999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.45  E-value=4.8e-13  Score=95.03  Aligned_cols=114  Identities=23%  Similarity=0.428  Sum_probs=87.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc-CCCCCcceeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL-SVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~l~~   96 (152)
                      ..++|++.+.||+|+||.||++.+..++..+++|.+............         +.+|+.++..+ + ||||+++++
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~---------~~~E~~~l~~l~~-h~ni~~~~~   74 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQR---------TFREIMFLQELGD-HPNIVKLLN   74 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhh---------hhHHHHHHHHhcC-CCCccceee
Confidence            456899999999999999999999888999999987542211111111         44689999999 6 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..    .....+|++|||+. ++|.++++.    + .+++..++.++.|++.|
T Consensus        75 ~~~~----~~~~~~~lv~e~~~-~~L~~~~~~----~-~~~~~~~~~i~~qi~~~  119 (337)
T cd07852          75 VIKA----ENDKDIYLVFEYME-TDLHAVIRA----N-ILEDVHKRYIMYQLLKA  119 (337)
T ss_pred             eecc----CCCceEEEEecccc-cCHHHHHhc----C-CCCHHHHHHHHHHHHHH
Confidence            8731    23456899999996 588888742    2 58899999999998875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.45  E-value=1.8e-12  Score=88.75  Aligned_cols=107  Identities=25%  Similarity=0.475  Sum_probs=78.4

Q ss_pred             EEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          26 ELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      +.||+|+||.||++.....   ...+|+|.+..... ......         +.+|+.+++.+. |||++++++.+.   
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~---------~~~e~~~l~~l~-h~~iv~~~~~~~---   66 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQ---------FLKEGIIMKDFS-HPNVLSLLGICL---   66 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHH---------HHHHHHHHccCC-CCCcceEEEEee---
Confidence            3589999999999986432   34688888753211 111111         457888999998 999999999763   


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        ..++..+++|||+.+|+|.+++...   ...+++..+..++.|+++|
T Consensus        67 --~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~  110 (262)
T cd05058          67 --PSEGSPLVVLPYMKHGDLRNFIRSE---THNPTVKDLIGFGLQVAKG  110 (262)
T ss_pred             --cCCCCcEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence              3456689999999999999998532   2246778888888898876

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.44  E-value=1.7e-12  Score=90.59  Aligned_cols=108  Identities=31%  Similarity=0.500  Sum_probs=85.9

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|+....||+|+||.||++....++..+++|.+.....  ....         .+.+|+.+++.+. |+|++++++.+  
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~---------~~~~e~~~l~~l~-h~~iv~~~~~~--   86 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--QRRE---------LLFNEVVIMRDYQ-HENVVEMYNSY--   86 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--hHHH---------HHHHHHHHHHhcC-CcchhheeeEE--
Confidence            34444679999999999999888999999998753221  1111         1457888999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++++|.+++.   .  ..+++..++.++.|++.|
T Consensus        87 ----~~~~~~~lv~e~~~~~~L~~~~~---~--~~~~~~~~~~~~~ql~~~  128 (292)
T cd06657          87 ----LVGDELWVVMEFLEGGALTDIVT---H--TRMNEEQIAAVCLAVLKA  128 (292)
T ss_pred             ----EeCCEEEEEEecCCCCcHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence                67789999999999999988763   2  248999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG2052|consensus

Probab=99.43  E-value=1.1e-12  Score=93.63  Aligned_cols=110  Identities=25%  Similarity=0.389  Sum_probs=83.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHh--ccCCCCCccee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK--DLSVHPNIPSF   94 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~i~~l   94 (152)
                      -...+..+.+.||+|.||.||+|.+  .|+.||||++.... + ..+            .+|.++.+  .++ |+||.++
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd-E-~SW------------frEtEIYqTvmLR-HENILgF  270 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD-E-RSW------------FRETEIYQTVMLR-HENILGF  270 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccc--cCCceEEEEecccc-h-hhh------------hhHHHHHHHHHhc-cchhhhh
Confidence            3456789999999999999999987  67789999996422 1 122            23444444  356 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ++.-+.++  .+-..+|||++|-+.|+|+|||++     ..++......++..++.
T Consensus       271 IaaD~~~~--gs~TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~As  319 (513)
T KOG2052|consen  271 IAADNKDN--GSWTQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIAS  319 (513)
T ss_pred             hhccccCC--CceEEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhh
Confidence            98875544  345679999999999999999953     24888888888776653

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.43  E-value=6.2e-12  Score=89.62  Aligned_cols=117  Identities=23%  Similarity=0.380  Sum_probs=86.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ...+|.+.+.||+|+||.||++.+..+++.+|+|.+........ ...        .+.+|+.++..+. ||||++++++
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~--------~~~~e~~~l~~l~-h~niv~~~~~   82 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEI-FAK--------RAYRELTLLKHMQ-HENVIGLLDV   82 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccccc-chh--------HHHHHHHHHHhcC-CCCccchhhe
Confidence            34689999999999999999999888899999998864322111 111        1457899999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +............++++||+. ++|..++    .  ..+++..+..++.|++.|
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~--~~~~~~~~~~~~~qi~~a  129 (342)
T cd07879          83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----G--HPLSEDKVQYLVYQMLCG  129 (342)
T ss_pred             ecccccCCCCceEEEEecccc-cCHHHHH----c--CCCCHHHHHHHHHHHHHH
Confidence            843211112245799999995 4665544    1  248999999999999876

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.42  E-value=3.4e-12  Score=89.72  Aligned_cols=102  Identities=26%  Similarity=0.325  Sum_probs=78.9

Q ss_pred             ceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCCceEE
Q psy2812          32 TYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLW  111 (152)
Q Consensus        32 ~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~  111 (152)
                      +++.|+.+....++..+|+|.+............         +..|+.+++.+. ||||+++++++      ...+..+
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~---------~~~Ei~~l~~l~-h~~i~~~~~~~------~~~~~~~   75 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKL---------LQQEIITSRQLQ-HPNILPYVTSF------IVDSELY   75 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHH---------HHHHHHHHHhcC-Ccchhhhhhee------ecCCeEE
Confidence            4455666666678999999998754222222111         557999999998 99999999999      6778899


Q ss_pred             EEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         112 FVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       112 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++|||+++|+|.+++.....  ..+++..+..++.|+++|
T Consensus        76 ~~~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~l~~~  113 (314)
T cd08216          76 VVSPLMAYGSCEDLLKTHFP--EGLPELAIAFILKDVLNA  113 (314)
T ss_pred             EEEeccCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHH
Confidence            99999999999999964322  248999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0584|consensus

Probab=99.41  E-value=8.9e-13  Score=97.19  Aligned_cols=111  Identities=28%  Similarity=0.458  Sum_probs=83.9

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCC--CchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP--ENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+..+.||+|+|-.||++.+..+|-.||=-.++...  ...+....         +-.|+++|+.|. ||||+++++.|.
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR---------~~~Ev~lLKsL~-H~NIirfy~SW~  111 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELER---------LYSEVHLLKSLK-HPNIIRFYDSWV  111 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHH---------HHHHHHHHccCC-CCceeeeeehee
Confidence            456778999999999999998788776622222110  11111111         558999999999 999999999996


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +    .....+-+|+|++..|+|..|++++++    ++...++.+++||++
T Consensus       112 d----~~n~~in~iTEL~TSGtLr~Y~kk~~~----vn~kaik~W~RQILk  154 (632)
T KOG0584|consen  112 D----TDNKTINFITELFTSGTLREYRKKHRR----VNIKAIKSWCRQILK  154 (632)
T ss_pred             c----CCCceeeeeeecccCCcHHHHHHHhcc----CCHHHHHHHHHHHHH
Confidence            4    334669999999999999999976554    788889999999875

>KOG4279|consensus

Probab=99.39  E-value=1.6e-12  Score=97.78  Aligned_cols=103  Identities=31%  Similarity=0.534  Sum_probs=85.1

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPE  106 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~  106 (152)
                      +||+|.+|.||-++++.+....|+|.|+-...  +..+       +  +..|+.+.+.+. |.|||++.+++      ..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds--r~~Q-------P--LhEEIaLH~~Lr-HkNIVrYLGs~------se  643 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS--REVQ-------P--LHEEIALHSTLR-HKNIVRYLGSV------SE  643 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccc--hhhc-------c--HHHHHHHHHHHh-hHhHHHHhhcc------CC
Confidence            69999999999999998888899999873211  1111       1  347999999999 99999999998      78


Q ss_pred             CceEEEEEcccCCCChHHHHHHhhhCCCCC--CHHHHHHHHHhhhc
Q psy2812         107 EDQLWFVMELCTGGSVTDLVQGMKKRGVSL--SEDQIAYILYGTVQ  150 (152)
Q Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l--~~~~~~~~~~qi~~  150 (152)
                      .+++-++||-.+||+|.++++  .+.+ ++  .|..+-+|..||++
T Consensus       644 nGf~kIFMEqVPGGSLSsLLr--skWG-PlKDNEstm~fYtkQILe  686 (1226)
T KOG4279|consen  644 NGFFKIFMEQVPGGSLSSLLR--SKWG-PLKDNESTMNFYTKQILE  686 (1226)
T ss_pred             CCeEEEEeecCCCCcHHHHHH--hccC-CCccchhHHHHHHHHHHH
Confidence            899999999999999999996  3444 46  88899999999986

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.38  E-value=4.4e-12  Score=85.94  Aligned_cols=94  Identities=18%  Similarity=0.270  Sum_probs=74.8

Q ss_pred             cceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCCceE
Q psy2812          31 GTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQL  110 (152)
Q Consensus        31 G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~  110 (152)
                      |.+|.||++.+..+++.+|+|.+.....                ...|...+.... |||++++++.+      ...+..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----------------~~~~~~~~~~~~-~~~i~~~~~~~------~~~~~~   60 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----------------YSRERLTIIPHC-VPNMVCLHKYI------VSEDSV   60 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----------------hhhHHHHHHhcC-CCceeehhhhe------ecCCeE
Confidence            8899999999999999999999875321                112333333344 99999999998      677889


Q ss_pred             EEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         111 WFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       111 ~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++|||++||+|.+++...    ..+++..+..++.|+++|
T Consensus        61 ~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~ql~~~   97 (237)
T cd05576          61 FLVLQHAEGGKLWSHISKF----LNIPEECVKRWAAEMVVA   97 (237)
T ss_pred             EEEEecCCCCCHHHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            9999999999999998532    248999999999999876

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1025|consensus

Probab=99.38  E-value=6.1e-13  Score=101.15  Aligned_cols=109  Identities=24%  Similarity=0.424  Sum_probs=85.8

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      .+..++||+|+||.||++.+-..++    +||+|++...... +....         +..|+.+|.++. |||+++++++
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~-~~s~e---------~LdeAl~masld-Hpnl~RLLgv  766 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP-KASIE---------LLDEALRMASLD-HPNLLRLLGV  766 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc-hhhHH---------HHHHHHHHhcCC-CchHHHHhhh
Confidence            4557789999999999998865554    5888887643322 11111         567999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++       .+.+.||++|+++|+|.|+++.++.   .+-....+.+..||+++
T Consensus       767 c~-------~s~~qlvtq~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkg  810 (1177)
T KOG1025|consen  767 CM-------LSTLQLVTQLMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKG  810 (1177)
T ss_pred             cc-------cchHHHHHHhcccchHHHHHHHhhc---cccHHHHHHHHHHHHHH
Confidence            94       3338999999999999999976443   58999999999999976

>KOG0576|consensus

Probab=99.36  E-value=1.4e-13  Score=102.30  Aligned_cols=113  Identities=40%  Similarity=0.720  Sum_probs=91.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      +++.++|..+..+|+|.+|.||+++++.++...|+|.++......-..           ...|+-+++.-+ ||||+.++
T Consensus        11 rnP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~-----------iqqei~~~~dc~-h~nivay~   78 (829)
T KOG0576|consen   11 RNPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSG-----------IQQEIGMLRDCR-HPNIVAYF   78 (829)
T ss_pred             cCCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccc-----------cccceeeeecCC-CcChHHHH
Confidence            478899999999999999999999999999999999998543322111           235667777777 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +.+      -....+|+.||||.||+|.+..+    -..++++.++.++.+..++
T Consensus        79 gsy------lr~dklwicMEycgggslQdiy~----~TgplselqiayvcRetl~  123 (829)
T KOG0576|consen   79 GSY------LRRDKLWICMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQ  123 (829)
T ss_pred             hhh------hhhcCcEEEEEecCCCcccceee----ecccchhHHHHHHHhhhhc
Confidence            999      67888999999999999988763    2236999999888876553

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.36  E-value=3.8e-12  Score=83.66  Aligned_cols=113  Identities=22%  Similarity=0.219  Sum_probs=73.0

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh----------HHH-----HHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE----------IEE-----EYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~----------~~~-----~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      .+.||+|+||.||++.+. +|+.+|+|+++........          +.+     ....+.......|..++..+. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence            357999999999999975 8999999999764321111          000     000011112346888888887 77


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.......       ... .+++|||++|+++.....   . ...+++..+..++.|++.|
T Consensus        80 ~v~~p~~~~-------~~~-~~iVmE~i~g~~l~~~~~---~-~~~~~~~~~~~i~~qi~~~  129 (190)
T cd05147          80 GIPCPEPIL-------LKS-HVLVMEFIGDDGWAAPRL---K-DAPLSESKARELYLQVIQI  129 (190)
T ss_pred             CCCCCcEEE-------ecC-CEEEEEEeCCCCCcchhh---h-cCCCCHHHHHHHHHHHHHH
Confidence            764433322       122 389999998877655431   1 1358999999999998765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4721|consensus

Probab=99.35  E-value=1.2e-12  Score=96.30  Aligned_cols=106  Identities=23%  Similarity=0.429  Sum_probs=85.2

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .|.++.+...-++.||+|+.|.||+++.  .++.||||.++...                  ..++.=|++|. ||||+.
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elk------------------ETdIKHLRkLk-H~NII~  176 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELK------------------ETDIKHLRKLK-HPNIIT  176 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhhh------------------hhhHHHHHhcc-Ccceee
Confidence            4567777777789999999999999975  67789999775321                  13555678888 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +.+++      .....+|||||||..|.|...|+   . +..++......+..+|+.
T Consensus       177 FkGVC------tqsPcyCIiMEfCa~GqL~~VLk---a-~~~itp~llv~Wsk~IA~  223 (904)
T KOG4721|consen  177 FKGVC------TQSPCYCIIMEFCAQGQLYEVLK---A-GRPITPSLLVDWSKGIAG  223 (904)
T ss_pred             Eeeee------cCCceeEEeeeccccccHHHHHh---c-cCccCHHHHHHHHHHhhh
Confidence            99999      78899999999999999999994   2 335788888888777763

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.35  E-value=3.8e-11  Score=80.11  Aligned_cols=110  Identities=34%  Similarity=0.668  Sum_probs=87.3

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |.+.+.||+|++|.||++....++..+++|.+......  ....        .+.+|+..+..+. |+|++++++.+   
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~--------~~~~e~~~~~~~~-~~~i~~~~~~~---   66 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQRE--------EFLREIRILKKLK-HPNIVKLYGVF---   66 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHH--------HHHHHHHHHHhCC-CCChhhheeee---
Confidence            56788999999999999999888899999998754322  0111        1457888888887 99999999988   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ......++++|++++++|.+++....   ..+++..+..++.+++.+
T Consensus        67 ---~~~~~~~~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~  110 (225)
T smart00221       67 ---EDPEPLYLVMEYCEGGDLFDYLRKKG---GKLSEEEARFYLRQILEA  110 (225)
T ss_pred             ---ecCCceEEEEeccCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHH
Confidence               56788999999999999999985322   127888999998888764

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4645|consensus

Probab=99.34  E-value=1.8e-13  Score=107.77  Aligned_cols=116  Identities=28%  Similarity=0.481  Sum_probs=92.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....-+|+-...||.|.||+||.+.+..+|...|+|.|.......+ ....        ..+|..++..++ |||+|+++
T Consensus      1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k-~~~~--------i~eEm~vlE~ln-HpNlV~Yy 1300 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK-TFKL--------IAEEMKVLEGLN-HPNLVRYY 1300 (1509)
T ss_pred             ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccc-cCcc--------hHHHHHHHHhcc-CccccccC
Confidence            3445567788899999999999999999999999999875433311 1111        347999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++-      -.++..+|.||||+||+|.++++.    +...++...+.|..|++.+
T Consensus      1301 GVE------vHRekv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~g 1346 (1509)
T KOG4645|consen 1301 GVE------VHREKVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEG 1346 (1509)
T ss_pred             cee------ecHHHHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHH
Confidence            987      577889999999999999999953    2347888888888888754

>KOG0596|consensus

Probab=99.31  E-value=3.9e-12  Score=93.02  Aligned_cols=116  Identities=14%  Similarity=0.219  Sum_probs=87.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .+....|++++.||+||-++||++.. .+.+.||+|.+...........         ++.+|+.+|.++.+|.+|++|+
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~---------gy~nEI~lL~KLkg~~~IIqL~  426 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLD---------GYRNEIALLNKLKGHDKIIQLY  426 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHH---------HHHHHHHHHHHhcCCceEEEEe
Confidence            34556799999999999999999984 5556677776543222222222         2668999999999999999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++-      -+++++|||||+- ..||..+|+.   ....++...+++|..|++.|
T Consensus       427 DYE------v~d~~lYmvmE~G-d~DL~kiL~k---~~~~~~~~~lk~ywkqML~a  472 (677)
T KOG0596|consen  427 DYE------VTDGYLYMVMECG-DIDLNKILKK---KKSIDPDWFLKFYWKQMLLA  472 (677)
T ss_pred             eee------ccCceEEEEeecc-cccHHHHHHh---ccCCCchHHHHHHHHHHHHH
Confidence            988      5799999999966 6789888853   22235545899999999876

>KOG1163|consensus

Probab=99.31  E-value=3.7e-11  Score=80.24  Aligned_cols=110  Identities=25%  Similarity=0.344  Sum_probs=88.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|.+++.||+|+||.+|++....+|..||+|.-+......             ++.-|..+...+.+...++.+.-
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp-------------qL~yEskvY~iL~~g~GiP~i~~   78 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP-------------QLLYESKVYRILQGGVGIPHIRH   78 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc-------------chhHHHHHHHHhccCCCCchhhh
Confidence            45678999999999999999999999999999999765432211             14467777887776788888777


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhh
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTV  149 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~  149 (152)
                      ..      ....+-.+|||+. |.+|.++++.+.+   .++..+++.++-|++
T Consensus        79 y~------~e~~ynvlVMdLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml  121 (341)
T KOG1163|consen   79 YG------TEKDYNVLVMDLL-GPSLEDLFNFCSR---RFTMKTVLMLADQML  121 (341)
T ss_pred             hc------cccccceeeeecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHH
Confidence            66      6677889999998 9999999987665   489999998888875

>KOG1345|consensus

Probab=99.31  E-value=1e-12  Score=88.80  Aligned_cols=114  Identities=18%  Similarity=0.306  Sum_probs=90.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...+.|.+.+.||+|.||+|.+++++.+.+.+++|.+........++.            +|...--.+..|.||+.-++
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~------------rEfhY~~~Ls~H~hIi~tY~   88 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFV------------REFHYSFFLSPHQHIIDTYE   88 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHH------------HHhccceeeccchhhhHHHH
Confidence            345679999999999999999999999999999999986554444444            45444444556899998776


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      .-.     ++.+...++|||++.|||.+-+.   ..  .+-|...+.++.|+++|+
T Consensus        89 vaF-----qt~d~YvF~qE~aP~gdL~snv~---~~--GigE~~~K~v~~ql~SAi  134 (378)
T KOG1345|consen   89 VAF-----QTSDAYVFVQEFAPRGDLRSNVE---AA--GIGEANTKKVFAQLLSAI  134 (378)
T ss_pred             HHh-----hcCceEEEeeccCccchhhhhcC---cc--cccHHHHHHHHHHHHHHH
Confidence            532     78889999999999999988772   22  389999999999999884

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.30  E-value=3.6e-11  Score=86.04  Aligned_cols=93  Identities=10%  Similarity=0.011  Sum_probs=66.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-CCCeEEEEEeecCCCc-hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-TGDHVAIKIMENIPEN-IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~a~K~i~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ..+...++|.+.+.||+|+||.||++.+.. +++.+|+|.+...... .......       .+.+|+.+++.+. |+|+
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~-------~~~~E~~iL~~L~-h~~i   83 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARH-------LAAREIRALKTVR-GIGV   83 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHH-------HHHHHHHHHHhcc-CCCC
Confidence            345567789999999999999999998876 5677899986532110 0111111       1568999999998 9998


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChH
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~  123 (152)
                      +..+..+         +..|++|||++|++|.
T Consensus        84 v~~l~~~---------~~~~LVmE~~~G~~L~  106 (365)
T PRK09188         84 VPQLLAT---------GKDGLVRGWTEGVPLH  106 (365)
T ss_pred             CcEEEEc---------CCcEEEEEccCCCCHH
Confidence            8533222         3479999999999986

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.30  E-value=7.5e-12  Score=93.48  Aligned_cols=125  Identities=13%  Similarity=0.139  Sum_probs=79.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCC-CeEEEEEeecCCCchh----hHHHHHHH--hhhhhHHHHHHHHhccCCCCCc
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETG-DHVAIKIMENIPENIE----EIEEEYLV--LKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~~a~K~i~~~~~~~~----~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .++|++++.||+|+||.||+|..+... ...+.|.+........    ........  .....+.+|+.++..++ ||||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCCc
Confidence            367999999999999999998765432 2222232211110000    00000000  00112568999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-CCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+..|++++++ +++|.+++..... .........++.++.|++.|
T Consensus       226 v~l~~~~------~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~a  279 (501)
T PHA03210        226 LKIEEIL------RSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCA  279 (501)
T ss_pred             CcEeEEE------EECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHH
Confidence            9999999      6778899999999 5677777642111 11224567788899999876

>KOG0200|consensus

Probab=99.30  E-value=2.8e-11  Score=92.22  Aligned_cols=122  Identities=24%  Similarity=0.415  Sum_probs=94.3

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC---C----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE---T----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+..+.++.++.+.||+|.||.|+++....   .    ...+|+|..+..... .+...         +..|+.+|+.+.
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~---------~~~El~~m~~~g  359 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKD---------LMSELNVLKELG  359 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHH---------HHHHHHHHHHhc
Confidence            466677777888899999999999997431   1    345888887654332 11111         568999999998


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh---hC-------C--CCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK---KR-------G--VSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~-------~--~~l~~~~~~~~~~qi~~a  151 (152)
                      .|+|++.+.+++      ...+.+++++||++.|+|.++++..+   .-       .  ..++....+.++.||+..
T Consensus       360 ~H~niv~llG~~------t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~G  430 (609)
T KOG0200|consen  360 KHPNIVNLLGAC------TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANG  430 (609)
T ss_pred             CCcchhhheeee------ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHH
Confidence            899999999999      56889999999999999999997654   00       0  138999999999999864

>KOG0671|consensus

Probab=99.29  E-value=2.1e-12  Score=90.52  Aligned_cols=114  Identities=27%  Similarity=0.401  Sum_probs=88.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-C----Cc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-P----NI   91 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~----~i   91 (152)
                      ...++|.++..+|+|.||+|..|.++.++..+|+|+++.-....+     +       ..-|+.+++++..+ |    .+
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYre-----A-------a~iEi~vLqki~~~DP~g~~rc  153 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYRE-----A-------ALIEIEVLQKINESDPNGKFRC  153 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhh-----H-------HHHHHHHHHHHHhcCCCCceEE
Confidence            346789999999999999999999998889999999874221111     1       23477778777422 2    36


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.++|      +-.++.|+|+|.+ |-++++++..  +.-.+++.+.++.+.+|+++|
T Consensus       154 v~m~~wF------dyrghiCivfell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~s  204 (415)
T KOG0671|consen  154 VQMRDWF------DYRGHICIVFELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLES  204 (415)
T ss_pred             Eeeehhh------hccCceEEEEecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHH
Confidence            6777778      7889999999988 8899999953  233469999999999999987

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.26  E-value=8e-11  Score=77.43  Aligned_cols=113  Identities=21%  Similarity=0.234  Sum_probs=73.3

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHH---------------HHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE---------------EYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~---------------~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      .+.||+|++|.||++.+. +|+.+|+|+++...........               ....+.......|...+..+. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA   79 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence            467999999999999976 8999999999865321111000               000111112457888888887 88


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.......      ...  .+++|||++|+++.....  ..  ..+++..+..++.|++.|
T Consensus        80 ~i~~p~~~~------~~~--~~lVmE~~~g~~~~~~~l--~~--~~~~~~~~~~i~~~l~~~  129 (190)
T cd05145          80 GVPVPEPIL------LKK--NVLVMEFIGDDGSPAPRL--KD--VPLEEEEAEELYEQVVEQ  129 (190)
T ss_pred             CCCCceEEE------ecC--CEEEEEEecCCCchhhhh--hh--ccCCHHHHHHHHHHHHHH
Confidence            775444433      122  489999998875543321  12  247888999999998865

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.25  E-value=3.3e-10  Score=74.40  Aligned_cols=104  Identities=42%  Similarity=0.739  Sum_probs=83.6

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      ||+|++|.||++....++..+++|......... ...         .+.+|+..++.+. |++++++++.+      ...
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~---------~~~~e~~~~~~l~-~~~i~~~~~~~------~~~   63 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLE---------ELLREIEILKKLN-HPNIVKLYGVF------EDE   63 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHH---------HHHHHHHHHHhcC-CCCeeeEeeee------ecC
Confidence            689999999999987778999999987543221 001         1557889999998 99999999999      666


Q ss_pred             ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         108 DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...++++|++.+++|.+++....   ..+++..++.++.++++|
T Consensus        64 ~~~~~~~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~  104 (215)
T cd00180          64 NHLYLVMEYCEGGSLKDLLKENE---GKLSEDEILRILLQILEG  104 (215)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHH
Confidence            88999999999999999985321   248999999999998765

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0668|consensus

Probab=99.24  E-value=9.6e-13  Score=87.10  Aligned_cols=111  Identities=21%  Similarity=0.430  Sum_probs=89.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|+++..+|+|.++.|+.+....+++.+++|++++-.  .++            ..+|+.++..+.+||||+++++
T Consensus        35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkK------------IkREikIL~nL~gg~NIi~L~D  100 (338)
T KOG0668|consen   35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKK------------IKREIKILQNLRGGPNIIKLLD  100 (338)
T ss_pred             cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHH------------HHHHHHHHHhccCCCCeeehhh
Confidence            35678999999999999999999988889999999987522  111            4479999999999999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +..+    .......+++||+.+.+...+.       +.|+...++.++.++++|.
T Consensus       101 iV~D----p~SktpaLiFE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkAL  145 (338)
T KOG0668|consen  101 IVKD----PESKTPSLIFEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKAL  145 (338)
T ss_pred             hhcC----ccccCchhHhhhhccccHHHHh-------hhhchhhHHHHHHHHHHHH
Confidence            9854    3345578999999876654444       2489999999999999884

>KOG1165|consensus

Probab=99.23  E-value=7.8e-11  Score=81.90  Aligned_cols=111  Identities=24%  Similarity=0.368  Sum_probs=90.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...-+|.+.+.||+|+||.++.+...-+++.||+|.-+.. .....            +.-|....+.|.+.+.|++.+.
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQ------------LrdEYr~YKlL~g~~GIP~vYY   91 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQ------------LRDEYRTYKLLGGTEGIPQVYY   91 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEecccc-CCcch------------HHHHHHHHHHHcCCCCCCceee
Confidence            4556899999999999999999999889999999976531 11111            3356677777777899999888


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ..      +...+-.||+|++ |.+|.|++..+.+   .|+...+..++.|++.
T Consensus        92 FG------qeG~~NiLVidLL-GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~  135 (449)
T KOG1165|consen   92 FG------QEGKYNILVIDLL-GPSLEDLFDLCGR---RFSVKTVAMIAKQMIT  135 (449)
T ss_pred             ec------cccchhhhhhhhh-CcCHHHHHHHhcC---cccHHhHHHHHHHHHH
Confidence            77      7788899999999 9999999987654   5999999999999763

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.22  E-value=2.5e-10  Score=85.02  Aligned_cols=134  Identities=12%  Similarity=0.210  Sum_probs=80.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEc----------------CCCCeEEEEEeecCCCch-hhHHHHHHHhh--hhhHHH
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDV----------------ETGDHVAIKIMENIPENI-EEIEEEYLVLK--DLSIEE   77 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~----------------~~~~~~a~K~i~~~~~~~-~~~~~~~~~~~--~~~~~~   77 (152)
                      ...++|.+.+.||+|+||.||++...                ..++.+|+|.+....... .++..+.....  ......
T Consensus       142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v  221 (507)
T PLN03224        142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV  221 (507)
T ss_pred             ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence            45779999999999999999999642                234579999886432211 12221111100  011234


Q ss_pred             HHHHHhccCCCCC-----cceeeeeeeec--CCCCCCceEEEEEcccCCCChHHHHHHhhh-------------------
Q psy2812          78 EYLVLKDLSVHPN-----IPSFYGLYLRR--GGQPEEDQLWFVMELCTGGSVTDLVQGMKK-------------------  131 (152)
Q Consensus        78 e~~~~~~~~~~~~-----i~~l~~~~~~~--~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------------  131 (152)
                      |+.++..+. |.+     ++++++++...  .+....+..++|+||+++++|.++++....                   
T Consensus       222 E~~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        222 EAYMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            666666665 433     35555554211  011134668999999999999999863210                   


Q ss_pred             -CCCCCCHHHHHHHHHhhhcc
Q psy2812         132 -RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       132 -~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ....+++..++.++.|+++|
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~a  321 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTG  321 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHH
Confidence             01124567788888888765

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.22  E-value=9.7e-10  Score=76.82  Aligned_cols=124  Identities=19%  Similarity=0.267  Sum_probs=77.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhh---hhHHHHHHHHhccCCCCC
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKD---LSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~~~~~~~~~   90 (152)
                      ...+.|++.+.||+|+||.||++....+   +..+++|.......   ....+...+..   .....+...+..+. |++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~---~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~   84 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE---TIVMETLVYNNIYDIDKIALWKNIHNID-HLG   84 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC---chhhHHHHHHhhhhHHHHHHHHHhccCC-CCC
Confidence            4557899999999999999999998766   55667765432221   11111111111   11223334455666 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++.....  ......+++++++ ..++.++++..    ...++..++.++.|+++|
T Consensus        85 i~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~  138 (294)
T PHA02882         85 IPKYYGCGSFKR--CRMYYRFILLEKL-VENTKEIFKRI----KCKNKKLIKNIMKDMLTT  138 (294)
T ss_pred             CCcEEEeeeEec--CCceEEEEEEehh-ccCHHHHHHhh----ccCCHHHHHHHHHHHHHH
Confidence            999998763211  1123567888887 44666666432    136788899999999876

>KOG3653|consensus

Probab=99.21  E-value=1.1e-11  Score=89.11  Aligned_cols=106  Identities=26%  Similarity=0.439  Sum_probs=75.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHh--ccCCCCCcceeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK--DLSVHPNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~i~~l~~~   97 (152)
                      ...++.+.+|+|.||.||+++.  +++.||||+++..  ....            +..|..+..  .+. |+||++++..
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~--~kqs------------~~~Ek~Iy~lp~m~-h~nIl~Fi~~  272 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ--EKQS------------FQNEKNIYSLPGMK-HENILQFIGA  272 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH--HHHH------------HHhHHHHHhccCcc-chhHHHhhch
Confidence            3567788999999999999975  6689999998731  1111            334544444  344 9999999876


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhh
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTV  149 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~  149 (152)
                      --  ........++||++|-+.|+|.+|++.+     .+++.....++..++
T Consensus       273 ek--r~t~~~~eywLVt~fh~kGsL~dyL~~n-----tisw~~~cria~Sma  317 (534)
T KOG3653|consen  273 EK--RGTADRMEYWLVTEFHPKGSLCDYLKAN-----TISWNSLCRIAESMA  317 (534)
T ss_pred             hc--cCCccccceeEEeeeccCCcHHHHHHhc-----cccHHHHHHHHHHHH
Confidence            41  1112244799999999999999999532     488888888876654

>KOG0614|consensus

Probab=99.21  E-value=7.1e-13  Score=96.22  Aligned_cols=116  Identities=17%  Similarity=0.308  Sum_probs=93.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCC-chhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPE-NIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ....++++.+..||-|+||.|=++........+|+|++++... ..++..+         .-.|..+|...+ +|+||++
T Consensus       416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeH---------v~sEr~Im~~~~-s~fIvrL  485 (732)
T KOG0614|consen  416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEH---------VFSERNIMMECR-SDFIVRL  485 (732)
T ss_pred             ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHH---------HHhHHHHHHhcC-chHHHHH
Confidence            3455678889999999999999998766655689999875432 2222222         457999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |..|      .++.++||+||-|-||+|+..++   .+ +.|++..+++|+..+++|
T Consensus       486 YrTf------rd~kyvYmLmEaClGGElWTiLr---dR-g~Fdd~tarF~~acv~EA  532 (732)
T KOG0614|consen  486 YRTF------RDSKYVYMLMEACLGGELWTILR---DR-GSFDDYTARFYVACVLEA  532 (732)
T ss_pred             HHHh------ccchhhhhhHHhhcCchhhhhhh---hc-CCcccchhhhhHHHHHHH
Confidence            9999      88999999999999999999994   33 369999999999988876

>KOG1006|consensus

Probab=99.20  E-value=3.2e-12  Score=86.21  Aligned_cols=119  Identities=24%  Similarity=0.284  Sum_probs=85.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++.+-+..||.|.||.|++..++.+|+.+|+|.|+......+ ..+         +..|..+..+..++|+||+++
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~ke-q~r---------ll~e~d~~mks~~cp~IVkfy  129 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKE-QKR---------LLMEHDTVMKSSNCPNIVKFY  129 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHH-HHH---------HHHHHHHHHhhcCCcHHHHHh
Confidence            4455667777889999999999999999999999999986554222 111         456776666665599999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh-hCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK-KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.      -.++..|+-||+| .-+|..+.+... ..+..++|.-+-.+......|
T Consensus       130 Ga~------F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~A  179 (361)
T KOG1006|consen  130 GAL------FSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDA  179 (361)
T ss_pred             hhh------hcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhH
Confidence            998      5788899999999 457666554322 223357777766665444443

>KOG1164|consensus

Probab=99.20  E-value=3.1e-10  Score=80.47  Aligned_cols=112  Identities=26%  Similarity=0.336  Sum_probs=84.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCC-CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC---CCCCcceeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETG-DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS---VHPNIPSFYG   96 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~-~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~i~~l~~   96 (152)
                      +|++.+.||+|+||.||.+.+...+ ..+|+|............           +..|..++..+.   +.++++.+++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~-----------l~~E~~vl~~l~~~~~~~~~~~~~~   87 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSV-----------LKIEIQVLKKLEKKNGPSHFPKLLD   87 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCcc-----------chhHHHHHHHHhhhcCCCCCCEEEE
Confidence            8999999999999999999986664 568888776532221111           335666666665   2478899888


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...     ....+-|+||+.+ |.+|.++.....  ...++..++..++.|++.|
T Consensus        88 ~G~-----~~~~~~~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~  134 (322)
T KOG1164|consen   88 HGR-----STEDFNFIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNA  134 (322)
T ss_pred             ecc-----CCCceeEEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHH
Confidence            872     2567899999988 999999886544  3469999999999999876

>PRK10345 hypothetical protein; Provisional

Probab=99.20  E-value=3.1e-10  Score=75.62  Aligned_cols=86  Identities=20%  Similarity=0.311  Sum_probs=59.4

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC----CCCCcceeeeeeee
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS----VHPNIPSFYGLYLR  100 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~i~~l~~~~~~  100 (152)
                      .+.||+|+||.||.  +..++.. ++|.+........   .        .+.+|+.++..+.    .||||+++++.+.+
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~---~--------~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et   72 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGD---K--------EIRRELKYYAHLSRRLIDWSGIPRYYGTVET   72 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchH---H--------HHHHHHHHHHHhhccCCCCcccceeeEEEEe
Confidence            46899999999995  5555555 6888765322111   1        1457888888883    28999999999932


Q ss_pred             cCCCCCCceEE-EEEcc--cCCCChHHHHH
Q psy2812         101 RGGQPEEDQLW-FVMEL--CTGGSVTDLVQ  127 (152)
Q Consensus       101 ~~~~~~~~~~~-lv~e~--~~~g~L~~~l~  127 (152)
                      .   ...+.++ +|+||  +.+|+|.++++
T Consensus        73 ~---~g~g~v~~~I~e~~G~~~~tL~~~l~   99 (210)
T PRK10345         73 D---CGTGYVYDVIADFDGKPSITLTEFAE   99 (210)
T ss_pred             C---CCCeEEEEEEecCCCCcchhHHHHHH
Confidence            1   1113544 78999  55799999995

>KOG1035|consensus

Probab=99.15  E-value=1.1e-11  Score=97.47  Aligned_cols=71  Identities=28%  Similarity=0.462  Sum_probs=58.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|+.++.||+|+||.|++++++-+|+.||+|.|+... ......+         ..+|+.++.+++ |||||+++..|+
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~sk---------I~rEVk~LArLn-HpNVVRYysAWV  547 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSK---------ILREVKLLARLN-HPNVVRYYSAWV  547 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHH---------HHHHHHHHhhcC-Ccceeeeehhhh
Confidence            45777889999999999999999999999999998643 2222222         558999999999 999999999997


Q ss_pred             ec
Q psy2812         100 RR  101 (152)
Q Consensus       100 ~~  101 (152)
                      .+
T Consensus       548 Es  549 (1351)
T KOG1035|consen  548 ES  549 (1351)
T ss_pred             cc
Confidence            63

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.14  E-value=1.2e-09  Score=73.55  Aligned_cols=105  Identities=10%  Similarity=0.090  Sum_probs=73.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|...+.+|.|+||.||+...  ++..+++|.+.......+........  ...+.+|+..+.++. ||+++.+.+
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~--g~~~e~Ea~~l~rL~-~~GI~~~~d  102 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVK--GDYYENLIVQTDRVR-SEGLASLND  102 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhh--hHHHHHHHHHHHHHH-HCCCCcceE
Confidence            3467899999999999999999754  46689999987544333332221110  112457888899997 999999988


Q ss_pred             eeeecCCC--CCCceEEEEEcccCCCChHHHH
Q psy2812          97 LYLRRGGQ--PEEDQLWFVMELCTGGSVTDLV  126 (152)
Q Consensus        97 ~~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l  126 (152)
                      .+......  .-.+..+++|||++|.+|.++.
T Consensus       103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             eeeecccccccccCCeEEEEEEECCccHHHhh
Confidence            76431100  0134689999999999997764

>KOG0984|consensus

Probab=99.10  E-value=2.7e-10  Score=74.51  Aligned_cols=120  Identities=23%  Similarity=0.374  Sum_probs=94.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +..+.++...++.||+|++|.|-+.++..+|+..|+|.+..+....+.. +         .++|+.+......+|++|.+
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~-r---------~L~dldi~~r~~~CPf~V~F  110 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQK-R---------LLMDLDIIMRTVDCPFTVHF  110 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHH-H---------HHHhhhhhccCCCCCeEEEe
Confidence            4556667777889999999999999999999999999997543322211 1         45677766555559999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      -....+|+.||.| ..+|..+.+..-..+..++|..+-.++..+.+|
T Consensus       111 yGa~------~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~a  160 (282)
T KOG0984|consen  111 YGAL------FREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHA  160 (282)
T ss_pred             ehhh------hccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHH
Confidence            9988      6788899999999 568877776656667789999999998888776

>KOG0669|consensus

Probab=99.09  E-value=1.3e-12  Score=87.66  Aligned_cols=121  Identities=24%  Similarity=0.383  Sum_probs=88.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....+.|.-+..||+|.||.|++++.+.++++||+|.+-.......--..         ..+|+.++..+. |+|++.++
T Consensus        13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpit---------alreikiL~~lk-Henv~nli   82 (376)
T KOG0669|consen   13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPIT---------ALREIKILQLLK-HENVVNLI   82 (376)
T ss_pred             eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHH---------HHHHHHHHHHhc-chhHHHHH
Confidence            34456788888999999999999999899999888754322111111111         457999999998 99999999


Q ss_pred             eeeeecCCC--CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          96 GLYLRRGGQ--PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        96 ~~~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      +++.+..+.  .....+|+|+++|+ .||.-++   ++....++...+..++.++.+
T Consensus        83 Eic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlL---sn~~vr~sls~Ikk~Mk~Lm~  135 (376)
T KOG0669|consen   83 EICRTKATPTNRDRATFYLVFDFCE-HDLAGLL---SNRKVRFSLSEIKKVMKGLMN  135 (376)
T ss_pred             HHHhhccCCcccccceeeeeHHHhh-hhHHHHh---cCccccccHHHHHHHHHHHHH
Confidence            887553321  23456999999996 4788887   444456999999999988754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.03  E-value=2.5e-09  Score=81.08  Aligned_cols=119  Identities=21%  Similarity=0.307  Sum_probs=70.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC----CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET----GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|.+.+.||+|+||.||++.+..+    +..+|+|.+..... .+....            +.  +.... +.++.
T Consensus       129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~------------e~--l~~~~-~~~~~  192 (566)
T PLN03225        129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMN------------ER--VRRAC-PNSCA  192 (566)
T ss_pred             CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHH------------HH--HHhhc-hhhHH
Confidence            3567899999999999999999999888    88999998753221 111111            00  01111 11222


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh----------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK----------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+...+............++++||+.+++|.+++.....                .+.......+..++.|++.|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~a  267 (566)
T PLN03225        193 DFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFA  267 (566)
T ss_pred             HHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHH
Confidence            222111110001456779999999999999999853110                00012234566788888875

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.03  E-value=2.8e-09  Score=70.97  Aligned_cols=105  Identities=16%  Similarity=0.174  Sum_probs=69.2

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      +.||+|++|.||++..  .+..+++|................   ....+.+|+.++..+. +++++.....+      .
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~-~~~i~~p~~~~------~   69 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERI---RRERTRREARIMSRAR-KAGVNVPAVYF------V   69 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHH---HHHHHHHHHHHHHHHH-HCCCCCCeEEE------E
Confidence            5789999999999976  667889987653222111111110   0112457888888887 88877666555      3


Q ss_pred             CCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         106 EEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ..+..+++|||++|++|.+++..       ... ....++.+++.
T Consensus        70 ~~~~~~lv~e~~~G~~L~~~~~~-------~~~-~~~~i~~~i~~  106 (211)
T PRK14879         70 DPENFIIVMEYIEGEPLKDLINS-------NGM-EELELSREIGR  106 (211)
T ss_pred             eCCCCEEEEEEeCCcCHHHHHHh-------ccH-HHHHHHHHHHH
Confidence            45568899999999999998842       111 55566666554

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.03  E-value=4.3e-09  Score=70.75  Aligned_cols=99  Identities=39%  Similarity=0.709  Sum_probs=78.2

Q ss_pred             ceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCCceEE
Q psy2812          32 TYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLW  111 (152)
Q Consensus        32 ~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~  111 (152)
                      +||.||++....++..+++|.+........  ..        .+.+|+..++.+. |++++++++.+      ......+
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~--------~~~~e~~~~~~l~-~~~i~~~~~~~------~~~~~~~   63 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RE--------RILREISILKKLK-HPNIVRLYDVF------EDEDKLY   63 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH--HH--------HHHHHHHHHHhCC-CCcHHHHHhhe------eeCCEEE
Confidence            578999999988889999999875332211  11        1457888888887 99999999998      5678899


Q ss_pred             EEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         112 FVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       112 lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++|++++++|.+++..   .. .+++..++.++.+++.+
T Consensus        64 l~~e~~~~~~L~~~~~~---~~-~~~~~~~~~~~~~l~~~   99 (244)
T smart00220       64 LVMEYCDGGDLFDLLKK---RG-RLSEDEARFYARQILSA   99 (244)
T ss_pred             EEEeCCCCCCHHHHHHh---cc-CCCHHHHHHHHHHHHHH
Confidence            99999999999998853   11 28899999999988765

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0983|consensus

Probab=99.02  E-value=8.4e-11  Score=79.85  Aligned_cols=115  Identities=22%  Similarity=0.308  Sum_probs=85.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++.+.+..||.|+.|.|+++..+++|..+|+|.+.++... ++..+         ++..+.++.+-+.+|+||+.++
T Consensus        89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-ee~kR---------ILmDldvv~~s~dcpyIV~c~G  158 (391)
T KOG0983|consen   89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-EENKR---------ILMDLDVVLKSHDCPYIVQCFG  158 (391)
T ss_pred             cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH-HHHHH---------HHHhhhHHhhccCCCeeeeeee
Confidence            4455677788999999999999999999999999999865432 22111         3456666666555899999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|      -++..+++.||.|. .-+..++++..   .+++|.-+-++...+.+|
T Consensus       159 yF------i~n~dV~IcMelMs-~C~ekLlkrik---~piPE~ilGk~tva~v~A  203 (391)
T KOG0983|consen  159 YF------ITNTDVFICMELMS-TCAEKLLKRIK---GPIPERILGKMTVAIVKA  203 (391)
T ss_pred             EE------eeCchHHHHHHHHH-HHHHHHHHHhc---CCchHHhhhhhHHHHHHH
Confidence            99      46777999999884 44556665433   358888888877777665

>KOG0670|consensus

Probab=99.02  E-value=6.1e-10  Score=81.54  Aligned_cols=114  Identities=19%  Similarity=0.269  Sum_probs=91.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-----CCcc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-----PNIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~   92 (152)
                      .-..|.+....|+|-|+.|..|.+...|..||||+|..+..-.+.            -+.|+.+|++|+..     -|.+
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~Kt------------Gl~EleiLkKL~~AD~Edk~Hcl  497 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKT------------GLKELEILKKLNDADPEDKFHCL  497 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhh------------hhHHHHHHHHhhccCchhhhHHH
Confidence            345789999999999999999999888999999999864322222            23588888887631     3789


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|+..|      ...+++|||+|-+ ..+|.++++.++.. ..|....++.|+.|+.-|
T Consensus       498 rl~r~F------~hknHLClVFE~L-slNLRevLKKyG~n-vGL~ikaVRsYaqQLflA  548 (752)
T KOG0670|consen  498 RLFRHF------KHKNHLCLVFEPL-SLNLREVLKKYGRN-VGLHIKAVRSYAQQLFLA  548 (752)
T ss_pred             HHHHHh------hhcceeEEEehhh-hchHHHHHHHhCcc-cceeehHHHHHHHHHHHH
Confidence            999999      7899999999988 67999999876654 358889999999998765

>KOG1167|consensus

Probab=99.01  E-value=3.7e-10  Score=80.15  Aligned_cols=112  Identities=28%  Similarity=0.350  Sum_probs=91.9

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcC---CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVE---TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+...+.|.+++.||+|.|+.||++.+..   .+..+|+|.+........             +..|..++..+.++.||
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~r-------------i~~El~~L~~~gG~~ni   97 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSR-------------ILNELEMLYRLGGSDNI   97 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchH-------------HHHHHHHHHHhccchhh
Confidence            34567789999999999999999998876   677899998875433222             34688889999889999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +++.+++      ...+...+|+||+++-+..++..       .++...++.|+..++.|.
T Consensus        98 ~~~~~~~------rnnd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al  145 (418)
T KOG1167|consen   98 IKLNGCF------RNNDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKAL  145 (418)
T ss_pred             hcchhhh------ccCCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHh
Confidence            9999999      78889999999999887777763       378899999999888763

>smart00090 RIO RIO-like kinase

Probab=98.98  E-value=1.2e-09  Score=74.17  Aligned_cols=118  Identities=19%  Similarity=0.154  Sum_probs=75.2

Q ss_pred             CCceEEEEEeeccceeEEEEEE-EcCCCCeEEEEEeecCCCchhhHHH-------------HHHHhhhhhHHHHHHHHhc
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAK-DVETGDHVAIKIMENIPENIEEIEE-------------EYLVLKDLSIEEEYLVLKD   84 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~~a~K~i~~~~~~~~~~~~-------------~~~~~~~~~~~~e~~~~~~   84 (152)
                      ...|.+.+.||+|+||.||++. +..+|+.+|+|.+............             .........+..|..++..
T Consensus        27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3357889999999999999998 5678999999998754321100000             0000011124578899888


Q ss_pred             cCCC--CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          85 LSVH--PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        85 ~~~~--~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +. +  ..+++++..          ...++||||++|++|.....   . +..++...+..++.|++.|
T Consensus       107 L~-~~~i~~p~~~~~----------~~~~lV~E~~~g~~L~~~~~---~-~~~~~~~~~~~i~~qi~~~  160 (237)
T smart00090      107 LY-EAGVPVPKPIAW----------RRNVLVMEFIGGDGLPAPRL---K-DVEPEEEEEFELYDDILEE  160 (237)
T ss_pred             HH-hcCCCCCeeeEe----------cCceEEEEEecCCccccccc---c-cCCcchHHHHHHHHHHHHH
Confidence            86 4  334444431          12479999999888766541   1 1236666777888888765

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.87  E-value=4.7e-08  Score=73.88  Aligned_cols=94  Identities=18%  Similarity=0.206  Sum_probs=60.9

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |...+.||+|+||.||++....  ..+++|...............   .....+.+|+.++..+. |++++......   
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~p~~~~---  405 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDER---LRTERTRAEARLLSEAR-RAGVPTPVIYD---  405 (535)
T ss_pred             cCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHH---HHHHHHHHHHHHHHhhc-ccCCCeeEEEE---
Confidence            4457889999999999987633  334444322111111111100   00112568999999998 99988776555   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHH
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQ  127 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~  127 (152)
                         ......+++|||++|++|.+++.
T Consensus       406 ---~~~~~~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        406 ---VDPEEKTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             ---EeCCCCEEEEEecCCCcHHHHHH
Confidence               34556789999999999999874

>KOG0603|consensus

Probab=98.85  E-value=4.1e-09  Score=78.41  Aligned_cols=108  Identities=20%  Similarity=0.347  Sum_probs=84.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..+.|.+...+|.|+|+.|..|.+..+++..++|++.+....               ...|+.++....+|||++++.+.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~---------------~~~e~~~~~~~~~h~niv~~~~v  384 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD---------------NQDEIPISLLVRDHPNIVKSHDV  384 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccccc---------------cccccchhhhhcCCCcceeecce
Confidence            366788999999999999999999999999999999864211               12455455555559999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ....+.|+|||.+.||.+.+-+...     ......+..++++++.|
T Consensus       385 ~------~~~~~~~~v~e~l~g~ell~ri~~~-----~~~~~e~~~w~~~lv~A  427 (612)
T KOG0603|consen  385 Y------EDGKEIYLVMELLDGGELLRRIRSK-----PEFCSEASQWAAELVSA  427 (612)
T ss_pred             e------cCCceeeeeehhccccHHHHHHHhc-----chhHHHHHHHHHHHHHH
Confidence            9      7899999999999999887777421     12337777899998876

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.83  E-value=2.7e-08  Score=65.68  Aligned_cols=89  Identities=19%  Similarity=0.205  Sum_probs=56.9

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPE  106 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~  106 (152)
                      .||+|+||.||++..  .+..+++|................   ....+.+|+.++..+. ++++......+      ..
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~---~~~~~~~E~~~l~~l~-~~~i~~p~~~~------~~   68 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERI---RRERTRNEARLLSRAR-KAGVNTPVVYD------VD   68 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHH---HHHHHHHHHHHHHHHH-HCCCCCCEEEE------EE
Confidence            379999999999984  567889998653221111111110   0011457899998887 66544333333      23


Q ss_pred             CceEEEEEcccCCCChHHHHH
Q psy2812         107 EDQLWFVMELCTGGSVTDLVQ  127 (152)
Q Consensus       107 ~~~~~lv~e~~~~g~L~~~l~  127 (152)
                      .+..+++|||++|++|.+++.
T Consensus        69 ~~~~~lv~e~~~g~~l~~~~~   89 (199)
T TIGR03724        69 PDNKTIVMEYIEGKPLKDVIE   89 (199)
T ss_pred             CCCCEEEEEEECCccHHHHHh
Confidence            445789999999999988874

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0664|consensus

Probab=98.69  E-value=4.4e-10  Score=76.51  Aligned_cols=114  Identities=21%  Similarity=0.366  Sum_probs=82.1

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +.+..+.||-|.||.||.+.+.++|+.++.|.+..-....    ....     .+.+|..++.... |.|+....++..+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L----~s~k-----rvFre~kmLcfFk-HdNVLSaLDILQP  123 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNL----ASCK-----RVFREIKMLSSFR-HDNVLSLLDILQP  123 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHH----HHHH-----HHHHHHHHHHhhc-cccHHHHHHhcCC
Confidence            4555678999999999999999999999998775322111    1111     1557888888888 9999999988733


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      .+. .--..+|+++|++ .-||++.+    ...+.++.+.++-+++||++
T Consensus       124 ph~-dfFqEiYV~TELm-QSDLHKII----VSPQ~Ls~DHvKVFlYQILR  167 (449)
T KOG0664|consen  124 ANP-SFFQELYVLTELM-QSDLHKII----VSPQALTPDHVKVFVYQILR  167 (449)
T ss_pred             CCc-hHHHHHHHHHHHH-Hhhhhhee----ccCCCCCcchhhhhHHHHHh
Confidence            221 1124578888888 45777766    33457999999999999985

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.65  E-value=1.3e-07  Score=62.51  Aligned_cols=94  Identities=26%  Similarity=0.315  Sum_probs=60.2

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHH---HH--------HHhhhhhHHHHHHHHhccCCCC
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE---EY--------LVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~---~~--------~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      .|.+.+.||+|+||.||++.. .+++.+|+|+++...........   ..        ..........|..++..+. ++
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   93 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EE   93 (198)
T ss_pred             hhhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-Hc
Confidence            477889999999999999986 47899999998754311111100   00        0011112457888888876 65


Q ss_pred             C--cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHH
Q psy2812          90 N--IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV  126 (152)
Q Consensus        90 ~--i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l  126 (152)
                      +  ++..++          ....+++|||++|++|.++.
T Consensus        94 ~i~v~~~~~----------~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          94 GFPVPKPID----------WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCCCceee----------cCCceEEEEEeCCcchhhcc
Confidence            3  343332          13358999999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.62  E-value=1.8e-06  Score=60.11  Aligned_cols=111  Identities=33%  Similarity=0.622  Sum_probs=83.5

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC-Ccceeeeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP-NIPSFYGLYLR  100 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~i~~l~~~~~~  100 (152)
                      |.+.+.||.|+|+.||.+.+.   ..+++|.+............        .+.+|..++..+. |+ +++.+.+.+  
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~--------~~~~e~~~~~~~~-~~~~i~~~~~~~--   67 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVE--------RFLREIQILASLN-HPPNIVKLYDFF--   67 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHH--------HHHHHHHHHHHcc-CCcceeeEEEEE--
Confidence            778899999999999999875   67888888754332221111        1557888889998 66 799999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ......+++++++.++++.+++...... ..+++..+..++.|++.+
T Consensus        68 ----~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  113 (384)
T COG0515          68 ----QDEGSLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSA  113 (384)
T ss_pred             ----ecCCEEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHH
Confidence                5666689999999999999666422111 258999999999998764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.52  E-value=7.2e-07  Score=55.71  Aligned_cols=80  Identities=18%  Similarity=0.237  Sum_probs=58.8

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCcceeeeeeeecC
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSFYGLYLRRG  102 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l~~~~~~~~  102 (152)
                      +++.||+|.++.||++...  +..+++|....... ...            +..|..++..+..+ .++++++...    
T Consensus         2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-~~~------------~~~e~~~~~~l~~~~~~~p~~~~~~----   62 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-GAD------------REREVAILQLLARKGLPVPKVLASG----   62 (155)
T ss_pred             cceecccccccceEEEEec--CCeEEEEecCCCCc-hhH------------HHHHHHHHHHHHHcCCCCCeEEEEc----
Confidence            4577999999999999863  36789998764322 111            44677888887623 5888888877    


Q ss_pred             CCCCCceEEEEEcccCCCChHH
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTD  124 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~  124 (152)
                        ...+..+++|||++|+++..
T Consensus        63 --~~~~~~~~v~e~~~g~~~~~   82 (155)
T cd05120          63 --ESDGWSYLLMEWIEGETLDE   82 (155)
T ss_pred             --CCCCccEEEEEecCCeeccc
Confidence              56678999999998877653

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1166|consensus

Probab=98.49  E-value=5.4e-07  Score=71.30  Aligned_cols=112  Identities=23%  Similarity=0.274  Sum_probs=76.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..-.+.|.+.+.||+|+||+||+|.... ++.+|+|+-++...+.--+...  .+..+.       ...   -+.+..+.
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q--~~~RLk-------~~~---~~~~~~~~  760 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQ--VMERLK-------PQM---LPSIMHIS  760 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHH--HHHhhc-------hhh---hcchHHHH
Confidence            4456789999999999999999999766 8999999877654432100000  000000       111   24455555


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      .++      .-.+.-++++||.+.|+|.++++    ....+++..+.++..|++.
T Consensus       761 ~a~------~~~~~S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~  805 (974)
T KOG1166|consen  761 SAH------VFQNASVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLR  805 (974)
T ss_pred             HHH------ccCCcceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHH
Confidence            555      34556789999999999999996    3345899999999888875

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.48  E-value=5.6e-07  Score=67.72  Aligned_cols=124  Identities=17%  Similarity=0.272  Sum_probs=72.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch---------------------------hhHHHHH--HHh
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI---------------------------EEIEEEY--LVL   70 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~---------------------------~~~~~~~--~~~   70 (152)
                      ..|+. +.||+|++|.||.+..+.+|+.||+|++++.....                           .....+.  ...
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34665 78999999999999987779999999998643111                           0000010  111


Q ss_pred             hhhhHHHHHHHHhccCC---CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCC---CCCCHHHHHHH
Q psy2812          71 KDLSIEEEYLVLKDLSV---HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG---VSLSEDQIAYI  144 (152)
Q Consensus        71 ~~~~~~~e~~~~~~~~~---~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---~~l~~~~~~~~  144 (152)
                      .++.+.+|+..+.++..   +...+.+-.++.     +-....+++|||++|+++.++-. ....+   ..+.+..+..+
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~-----d~st~~VLvmE~i~G~~l~d~~~-l~~~g~d~~~la~~~v~~~  272 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYW-----DYCSETVMVMERMYGIPVSDVAA-LRAAGTDMKLLAERGVEVF  272 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeec-----ccCCCceEEEeeecCccHHhHHH-HHhcCCCHHHHHHHHHHHH
Confidence            22334555554444321   222222222221     22345789999999999987532 12222   13667777788


Q ss_pred             HHhhhc
Q psy2812         145 LYGTVQ  150 (152)
Q Consensus       145 ~~qi~~  150 (152)
                      +.|+.+
T Consensus       273 ~~Qif~  278 (537)
T PRK04750        273 FTQVFR  278 (537)
T ss_pred             HHHHHh
Confidence            888764

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.38  E-value=2.1e-06  Score=56.08  Aligned_cols=31  Identities=39%  Similarity=0.499  Sum_probs=26.5

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENI   56 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~   56 (152)
                      .+.||+|+||.||++.+. +++.+|+|++...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecC
Confidence            457999999999999875 7889999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1027|consensus

Probab=98.37  E-value=3.2e-07  Score=70.62  Aligned_cols=83  Identities=27%  Similarity=0.504  Sum_probs=64.2

Q ss_pred             EEEEEeeccceeE-EEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          23 KLQELIGEGTYGE-VYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        23 ~~~~~lg~G~~g~-V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      ...+.+|.|+-|. ||+|..  .++.||||.+-..   ...+           +.+|+.+++.-+.||||++++..-   
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e---~~~~-----------A~rEi~lL~eSD~H~NviRyyc~E---  572 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE---FFDF-----------AQREIQLLQESDEHPNVIRYYCSE---  572 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee--CCceehHHHHhhH---hHHH-----------HHHHHHHHHhccCCCceEEEEeec---
Confidence            3345677777765 799987  5668999876431   1111           458999999888899999999877   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHH
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                         +++.+.|+..|.| ..+|.+++..
T Consensus       573 ---~d~qF~YIalELC-~~sL~dlie~  595 (903)
T KOG1027|consen  573 ---QDRQFLYIALELC-ACSLQDLIES  595 (903)
T ss_pred             ---cCCceEEEEehHh-hhhHHHHHhc
Confidence               7899999999999 5799999965

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.32  E-value=5.7e-06  Score=55.13  Aligned_cols=84  Identities=13%  Similarity=0.170  Sum_probs=58.7

Q ss_pred             EEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      .+...|++|+||.|+++..  .+.+++.+.+....-.........       +.+|+.+++.+.++++++++++..    
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l-------~~rE~~iL~~L~~~~~vP~ll~~~----   71 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWL-------ARREALALRQLDGLPRTPRLLHWD----   71 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHH-------HHHHHHHHHhcCCCCCCCEEEEEc----
Confidence            4677899999999997753  666777665553322212111111       558999999997578899987743    


Q ss_pred             CCCCCceEEEEEcccCCCChHHH
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDL  125 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~  125 (152)
                            ..+++|||+.|.+|...
T Consensus        72 ------~~~lvmeyI~G~~L~~~   88 (218)
T PRK12274         72 ------GRHLDRSYLAGAAMYQR   88 (218)
T ss_pred             ------CEEEEEeeecCccHHhh
Confidence                  26899999999888654

>KOG0665|consensus

Probab=98.18  E-value=5.8e-07  Score=62.52  Aligned_cols=117  Identities=25%  Similarity=0.312  Sum_probs=86.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ....+|.-+..+|.|.- .|..+.+.-.++.+++|.+...........         ...+|..++..+. |+|+++++.
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~ak---------ra~rel~l~~~v~-~~nii~l~n   82 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAK---------RAYRELKLMKCVN-HKNIISLLN   82 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccch---------hhhhhhhhhhhhc-ccceeeeee
Confidence            34567888899999887 677788877888999987764332211111         1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|.+....+.....|+|||++ .++|+..+..      .++=..+.+++.|.+.+
T Consensus        83 ~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~~------elDH~tis~i~yq~~~~  130 (369)
T KOG0665|consen   83 VFTPQKTLEEFQEVYLVMELM-DANLCQVILM------ELDHETISYILYQMLCG  130 (369)
T ss_pred             ccCccccHHHHHhHHHHHHhh-hhHHHHHHHH------hcchHHHHHHHHHHHHH
Confidence            997654444556799999999 6789888851      26777888888888754

>KOG1024|consensus

Probab=98.11  E-value=3e-06  Score=60.80  Aligned_cols=120  Identities=18%  Similarity=0.251  Sum_probs=84.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCC-----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGD-----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ...+.+++....+-+|.||.||.+..+....     .+-+|.++..          ...++-.-+..|..++..+. |||
T Consensus       280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~----------AS~iQv~~~L~es~lly~~s-H~n  348 (563)
T KOG1024|consen  280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH----------ASQIQVNLLLQESMLLYGAS-HPN  348 (563)
T ss_pred             hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc----------ccHHHHHHHHHHHHHHhcCc-CCC
Confidence            3445667888888999999999997653322     1223332211          11111112567888899998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh----CCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK----RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+..++.+     +.....++++.+..-|+|..+++.++.    ..+.++..++..++.|++.|
T Consensus       349 ll~V~~V~i-----e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~a  408 (563)
T KOG1024|consen  349 LLSVLGVSI-----EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMA  408 (563)
T ss_pred             ccceeEEEe-----eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHH
Confidence            999988876     567778999999988999999985542    22467888999999998765

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.02  E-value=3e-05  Score=57.41  Aligned_cols=93  Identities=18%  Similarity=0.286  Sum_probs=55.9

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHH-------------------------------hhhhh
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV-------------------------------LKDLS   74 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~-------------------------------~~~~~   74 (152)
                      +.||+|++|.||++.. .+|+.||||+..+....  ....+...                               ..++.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~--~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  199 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEK--TIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD  199 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHH--HHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence            5799999999999986 57899999998654311  11111100                               11223


Q ss_pred             HHHHHHHHhccC----CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHH
Q psy2812          75 IEEEYLVLKDLS----VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ  127 (152)
Q Consensus        75 ~~~e~~~~~~~~----~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  127 (152)
                      +.+|+..+..+.    +++++ ..-..+.     +-.+..+++|||++|++|.++..
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v-~vP~v~~-----~~~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGV-YVPEVYW-----DRTSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCE-EeCCEeh-----hhcCCceEEEEeECCcccccHHH
Confidence            455665555442    13332 2222221     22344789999999999988764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0195|consensus

Probab=97.96  E-value=1.1e-06  Score=60.37  Aligned_cols=111  Identities=18%  Similarity=0.285  Sum_probs=74.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++..++..|.+..-|..|+++...+  .++.|++......... .+.        |..|.-.++-.. ||||+.+++.+ 
T Consensus       190 ~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~ri-srd--------fneefp~lrifs-hpnilpvlgac-  256 (448)
T KOG0195|consen  190 SSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARI-SRD--------FNEEFPALRIFS-HPNILPVLGAC-  256 (448)
T ss_pred             hhhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhh-cch--------hhhhCcceeeec-CCchhhhhhhc-
Confidence            3445566777888888998877433  3455555421111111 111        334555566666 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                           .++..+.++..|++.|+|++.+.  ...+..++..++..++.++++
T Consensus       257 -----nsppnlv~isq~mp~gslynvlh--e~t~vvvd~sqav~faldiar  300 (448)
T KOG0195|consen  257 -----NSPPNLVIISQYMPFGSLYNVLH--EQTSVVVDHSQAVRFALDIAR  300 (448)
T ss_pred             -----cCCCCceEeeeeccchHHHHHHh--cCccEEEecchHHHHHHHHHh
Confidence                 78899999999999999999995  233344667777777777654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.92  E-value=6.5e-05  Score=50.14  Aligned_cols=103  Identities=17%  Similarity=0.224  Sum_probs=65.0

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC-CCCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV-HPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~l~~~~~~~~~~  104 (152)
                      +.|+.|..+.+|++... .|..+++|........ . ...        .+..|..++..+.. +..+++++...      
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~-~~~--------~~~~E~~~~~~l~~~~~~vp~~~~~~------   66 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-P-SAH--------DVAREYRVLRALAGTGVPVPKVLALC------   66 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccC-c-ccc--------cHHHHHHHHHHhhCCCCCCCCEEEEC------
Confidence            57899999999999863 3578899986543221 0 000        14468888887763 23466666655      


Q ss_pred             CCC---ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         105 PEE---DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       105 ~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ...   +..+++|||++|.++.+.+.   .  ..+++.....++.++++
T Consensus        67 ~~~~~~~~~~~v~e~i~G~~l~~~~~---~--~~~~~~~~~~i~~~i~~  110 (223)
T cd05154          67 EDPSVLGTPFYVMERVDGRVLRDRLL---R--PELSPEERRALARALAD  110 (223)
T ss_pred             CCCCccCCceEEEEEeCCEecCCCCC---C--CCCCHHHHHHHHHHHHH
Confidence            222   36789999999988777541   1  13566665555555543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603|consensus

Probab=97.74  E-value=3.1e-06  Score=63.48  Aligned_cols=105  Identities=18%  Similarity=0.442  Sum_probs=75.5

Q ss_pred             EeeccceeEEEEEEE---cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          27 LIGEGTYGEVYWAKD---VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~---~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      .+|+|.||+|+++..   ...+..+++|...+.....+....         ...|..++...+.||.+++++..+     
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~---------t~~er~il~~~~~~~f~v~lhyaf-----   66 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTH---------TKQERIILAFVHNTPFLVKLHYAF-----   66 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccc---------cccHHHHHhhccCCCceeeeeeee-----
Confidence            368999999997753   245677899888765433332221         235777777777799999999999     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                       ++++.+++++++..||+|+..+.   +. ..+.+.....+...++-
T Consensus        67 -qt~~kl~l~ld~~rgg~lft~l~---~~-~~f~~~~~~~~~aelaL  108 (612)
T KOG0603|consen   67 -QTDGKLYLILDFLRGGDLFTRLS---KE-VMFDELDVAFYLAELAL  108 (612)
T ss_pred             -ccccchhHhhhhcccchhhhccc---cC-CchHHHHHHHHHHHHHH
Confidence             89999999999999998877763   22 24666666666655543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.72  E-value=0.00089  Score=45.74  Aligned_cols=111  Identities=17%  Similarity=0.161  Sum_probs=63.0

Q ss_pred             EEee-ccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHH--HHhhhhhHHHHHHHHhccCCCCCc--ceeeeeeee
Q psy2812          26 ELIG-EGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEY--LVLKDLSIEEEYLVLKDLSVHPNI--PSFYGLYLR  100 (152)
Q Consensus        26 ~~lg-~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i--~~l~~~~~~  100 (152)
                      ..|| .|+.|.||.+..  .+..+++|.......-.+-...+.  .......+.+|+.++..+. ++++  +..++....
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~  113 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV  113 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence            3576 788888888875  367889998864321111110000  0011112567999999987 7664  666665421


Q ss_pred             cCCCCCCceEEEEEcccCC-CChHHHHHHhhhCCCCCCHHHHHHHHH
Q psy2812         101 RGGQPEEDQLWFVMELCTG-GSVTDLVQGMKKRGVSLSEDQIAYILY  146 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~  146 (152)
                      ..  ......+++||+++| .+|.+++..     ..+++.....++.
T Consensus       114 ~~--~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~~~~i~~  153 (239)
T PRK01723        114 RH--GLFYRADILIERIEGARDLVALLQE-----APLSEEQWQAIGQ  153 (239)
T ss_pred             ec--CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHHHHHHHHH
Confidence            11  111234699999997 688888742     1366665544443

>KOG0601|consensus

Probab=97.49  E-value=0.00024  Score=53.24  Aligned_cols=116  Identities=18%  Similarity=0.111  Sum_probs=82.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEc-CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDV-ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....+|..+..||.|.|+.++.+..+ .++..|++|...+..........         ...|+-+...+..|.++++++
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~---------sl~ev~l~~~l~~~~~~~g~~  332 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF---------SLGEVILEAILGSHLPSVGKN  332 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc---------chhhhhHhhHhhcccccCCCC
Confidence            44567889999999999999988765 56778998887654332221111         223555555555589999988


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..|      ......|+-.|||+++++..... ..   ..+.+...+....|++.|
T Consensus       333 ~~W------~~~r~~~ip~e~~~~~s~~l~~~-~~---~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  333 SSW------SQLRQGYIPLEFCEGGSSSLRSV-TS---QMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             CCc------cccccccCchhhhcCcchhhhhH-HH---HhcCcchhhhhHHHHHhc
Confidence            888      56667889999999998766552 11   247888888888888765

>KOG3741|consensus

Probab=97.40  E-value=0.0008  Score=50.47  Aligned_cols=102  Identities=15%  Similarity=0.163  Sum_probs=69.5

Q ss_pred             EEEEEEEcCCCCeEEEEEeecCCC-chhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCCceEEEE
Q psy2812          35 EVYWAKDVETGDHVAIKIMENIPE-NIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFV  113 (152)
Q Consensus        35 ~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv  113 (152)
                      .-|++....+|..|++|++...+. ...+..            .-++.++++. |+|++.+.++|.+..  -.+..+++|
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t------------~lve~wkkl~-h~NvV~frevf~t~t--F~D~Slvlv  355 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRDQSTNKDT------------SLVEAWKKLC-HTNVVPFREVFLTYT--FGDLSLVLV  355 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccccCcccch------------HHHHHHHHhc-cCceeehhhhhhhhc--cCcceEEEE
Confidence            468888888999999998832111 111111            2455566777 999999999996433  356779999


Q ss_pred             EcccCC-CChHHHHHH-----------hhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         114 MELCTG-GSVTDLVQG-----------MKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       114 ~e~~~~-g~L~~~l~~-----------~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++|.++ ++|.++.=.           ....+...+|..+|.|+.|+..|
T Consensus       356 YDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaa  405 (655)
T KOG3741|consen  356 YDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAA  405 (655)
T ss_pred             EecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHH
Confidence            999875 677765410           01223357889999999999765

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.38  E-value=0.001  Score=42.54  Aligned_cols=78  Identities=18%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      ++.++.|.++.||++..  .+..+++|...........            ...|+.++..+.....+++++...      
T Consensus         3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~------------~~~E~~~l~~l~~~~~~P~~~~~~------   62 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLIN------------RENEAENSKLAAEAGIGPKLYYFD------   62 (170)
T ss_pred             eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccC------------HHHHHHHHHHHHHhCCCCceEEEe------
Confidence            46789999999999975  3678999986543211111            235777777665233345555544      


Q ss_pred             CCCceEEEEEcccCCCChHH
Q psy2812         105 PEEDQLWFVMELCTGGSVTD  124 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~  124 (152)
                      ..  ..+++||+++|.++.+
T Consensus        63 ~~--~~~lv~e~i~G~~l~~   80 (170)
T cd05151          63 PE--TGVLITEFIEGSELLT   80 (170)
T ss_pred             CC--CCeEEEEecCCCcccc
Confidence            22  3479999999987754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243|consensus

Probab=97.26  E-value=0.001  Score=50.98  Aligned_cols=87  Identities=21%  Similarity=0.346  Sum_probs=60.3

Q ss_pred             EEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCCceEEEEEccc
Q psy2812          38 WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELC  117 (152)
Q Consensus        38 ~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~  117 (152)
                      .+..+.++..+.+...+.........           ..+-+.-++.++ ||+|+++++.+      +.++.+|+|+|.+
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~-----------~~~A~k~lKtlR-HP~Il~yL~t~------e~~~~~ylvTErV   91 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTEL-----------AKRAVKRLKTLR-HPNILSYLDTT------EEEGTLYLVTERV   91 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHH-----------HHHHHHHhhhcc-Cchhhhhhhhh------cccCceEEEeecc
Confidence            35556778888888877544311111           223455577777 99999999999      8889999999998


Q ss_pred             CCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         118 TGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       118 ~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .  .|..+++.       +....+..-+.||+.|
T Consensus        92 ~--Pl~~~lk~-------l~~~~v~~Gl~qIl~A  116 (690)
T KOG1243|consen   92 R--PLETVLKE-------LGKEEVCLGLFQILAA  116 (690)
T ss_pred             c--cHHHHHHH-------hHHHHHHHHHHHHHHH
Confidence            6  77888853       3355555566677665

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.16  E-value=0.00098  Score=43.35  Aligned_cols=79  Identities=23%  Similarity=0.293  Sum_probs=52.2

Q ss_pred             EEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      ...+.|++|.+|.||++..  .|..+|+|.-+.+ .....            +..|+.++..+.+----++++.+.    
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~d-s~r~~------------l~kEakiLeil~g~~~~p~vy~yg----   85 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRD-SPRRN------------LEKEAKILEILAGEGVTPEVYFYG----   85 (201)
T ss_pred             hhhhhhhcccccEEEEeec--cCceEEEEEecCC-cchhh------------HHHHHHHHHHhhhcCCCceEEEec----
Confidence            4566799999999999976  5557888876532 22222            446888888877333334444432    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHH
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLV  126 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l  126 (152)
                            .-++.|||+.|-+|.++.
T Consensus        86 ------~~~i~me~i~G~~L~~~~  103 (201)
T COG2112          86 ------EDFIRMEYIDGRPLGKLE  103 (201)
T ss_pred             ------hhhhhhhhhcCcchhhhh
Confidence                  234559999987877765

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.04  E-value=0.006  Score=40.44  Aligned_cols=86  Identities=17%  Similarity=0.129  Sum_probs=54.5

Q ss_pred             EEeeccceeEEEEEEEcC------CCCeEEEEEeecCCCchhhHH---------------HHHHHhhhhhHHHHHHHHhc
Q psy2812          26 ELIGEGTYGEVYWAKDVE------TGDHVAIKIMENIPENIEEIE---------------EEYLVLKDLSIEEEYLVLKD   84 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~------~~~~~a~K~i~~~~~~~~~~~---------------~~~~~~~~~~~~~e~~~~~~   84 (152)
                      ..||.|.=+.||.+....      .+..+|+|+.+.+...-+...               .....+...+..+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468889999999997543      246899998764332211111               11222334556789999998


Q ss_pred             cCC-CCCcceeeeeeeecCCCCCCceEEEEEcccCCCC
Q psy2812          85 LSV-HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS  121 (152)
Q Consensus        85 ~~~-~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~  121 (152)
                      +.. .-+++.++...          .-+++|||+.++.
T Consensus        83 l~~~Gv~vP~pi~~~----------~~~lvME~Ig~~~  110 (197)
T cd05146          83 MQKAGIPCPEVVVLK----------KHVLVMSFIGDDQ  110 (197)
T ss_pred             HHHcCCCCCeEEEec----------CCEEEEEEcCCCC
Confidence            863 25667766532          3578999996543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601|consensus

Probab=97.01  E-value=0.0008  Score=50.55  Aligned_cols=112  Identities=18%  Similarity=0.216  Sum_probs=78.7

Q ss_pred             CceEEEEEeec--cceeEEEEEEE--cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          20 NKFKLQELIGE--GTYGEVYWAKD--VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        20 ~~~~~~~~lg~--G~~g~V~~~~~--~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..+.+...+|.  |.+|.+|.+..  +.++..+|+|.-.........-..         -.+|.....+++.|++.++.+
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~---------k~~~~~s~~~i~~~~~~v~~~  184 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKR---------KLREFLSHHKIDSHENPVRDS  184 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcccccc---------ccchhhcccccCccccccccC
Confidence            34667788999  99999998887  778888898863322111110000         124566666777799999988


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      ..+      +..+.+|+-+|+| +.+|..+..   .....++...++.++.+..+
T Consensus       185 ~~~------e~~~~lfiqtE~~-~~sl~~~~~---~~~~~~p~~~l~~~~~~~~~  229 (524)
T KOG0601|consen  185 PAW------EGSGILFIQTELC-GESLQSYCH---TPCNFLPDNLLWNSLRDWLS  229 (524)
T ss_pred             ccc------ccCCcceeeeccc-cchhHHhhh---cccccCCchhhhhHHhhhhh
Confidence            888      7899999999999 567777663   33335888888888877655

>KOG1266|consensus

Probab=96.98  E-value=0.00041  Score=49.24  Aligned_cols=67  Identities=18%  Similarity=0.244  Sum_probs=55.0

Q ss_pred             ccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          84 DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        84 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      .+. |.|+++++.++.++-. +......+++||++.|++..+|++.+.....+....-..++-||++|+
T Consensus       123 qlv-HsnlvkfH~yw~d~K~-~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal  189 (458)
T KOG1266|consen  123 QLV-HSNLVKFHKYWTDKKY-EEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSAL  189 (458)
T ss_pred             HHH-HHHHHHHHHhhccccc-ccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhh
Confidence            444 8999999988854332 245668999999999999999999888777899999999999999874

>KOG0590|consensus

Probab=96.79  E-value=0.00075  Score=52.02  Aligned_cols=109  Identities=25%  Similarity=0.290  Sum_probs=69.2

Q ss_pred             EEEEEeeccceeEEEEEEEcCCCCeEEEEEeecC--CCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENI--PENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .....+|.|.+|.|+.+........++.|.....  ....+.....     +  +..|..+-..+. |||++....... 
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~-----~--i~sE~~i~~~l~-h~~~~e~l~~~~-  391 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNY-----N--ITSEFCIGSSLS-HPNIIETLDIVQ-  391 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhh-----h--hhhheeeccccc-CCchhhhHHHHh-
Confidence            4566789999998887776665555555433210  1111111111     0  335777777887 999887776663 


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                           ......-.||||++ ||+.++..   . ..+....+..++.|++.
T Consensus       392 -----~~~~~~~~mE~~~~-Dlf~~~~~---~-~~~~~~e~~c~fKqL~~  431 (601)
T KOG0590|consen  392 -----EIDGILQSMEYCPY-DLFSLVMS---N-GKLTPLEADCFFKQLLR  431 (601)
T ss_pred             -----hcccchhhhhcccH-HHHHHHhc---c-cccchhhhhHHHHHHHH
Confidence                 22233333999998 99999842   1 24888899999999874

>KOG0590|consensus

Probab=96.75  E-value=0.0006  Score=52.55  Aligned_cols=117  Identities=21%  Similarity=0.263  Sum_probs=80.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCC-CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVET-GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      +...|.+.+.||+|.|+.+-......+ ...++.|.+..... .......        ...|..+-..+..|+|+++.++
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~-~~~~~~~--------i~~e~~~~~~~s~h~n~~~~~~   88 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPK-SEDSSEH--------IDTETDIQKKLSKHSNTVHMIE   88 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCC-ccchhhh--------cCccccccccccccccccccCC
Confidence            467899999999999999988875443 34466666654321 1111111        2245555556656999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..      ......++.+++..|+++++.+.  .......+...+..++.|+..+
T Consensus        89 ~~------~~~~~~~~~~~~s~g~~~f~~i~--~~~~~~~~~~~~~~~~~ql~s~  135 (601)
T KOG0590|consen   89 PS------SSPRSYLLSLSYSDGGSLFSKIS--HPDSTGTSSSSASRYLPQLNSG  135 (601)
T ss_pred             cc------CCCcccccccCcccccccccccc--cCCccCCCCcchhhhhhhhccC
Confidence            88      78899999999999999988873  1111146777777888887654

>PLN02876 acyl-CoA dehydrogenase

Probab=96.54  E-value=0.023  Score=45.74  Aligned_cols=86  Identities=19%  Similarity=0.278  Sum_probs=51.0

Q ss_pred             EEEEeeccceeEEEEEEEcCCC--CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC--cceeeeeee
Q psy2812          24 LQELIGEGTYGEVYWAKDVETG--DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN--IPSFYGLYL   99 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~--~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--i~~l~~~~~   99 (152)
                      -++.++.|....+|+......+  ..+++|..+.........          .+.+|..+++.+..|++  +++.+..+.
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~----------~~~rE~~~l~~L~~~~~vpVP~v~~~~~  111 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAH----------AVEREYQVLRALGEHTDVPVPKVYCLCT  111 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHH----------HHHHHHHHHHHHhhcCCCCCCcEEEEec
Confidence            3567899999999988754332  356666554322111110          14478888888753444  466666551


Q ss_pred             ecCCCCCCceEEEEEcccCCCCh
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSV  122 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L  122 (152)
                      +.   ...+..|+||||++|..+
T Consensus       112 d~---~v~G~~flVME~v~G~~~  131 (822)
T PLN02876        112 DA---SVIGTAFYIMEYLEGRIF  131 (822)
T ss_pred             CC---CcCCCceEEEEecCCccc
Confidence            10   112568999999987543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.46  E-value=0.0064  Score=46.11  Aligned_cols=117  Identities=17%  Similarity=0.193  Sum_probs=65.7

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchh-h--------------------------HHHHHH--HhhhhhHH
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE-E--------------------------IEEEYL--VLKDLSIE   76 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~-~--------------------------~~~~~~--~~~~~~~~   76 (152)
                      +.|+.++-|.||.+.. .+|+.||||+.+++....- .                          ...++.  ...++.+.
T Consensus       131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            5789999999999996 4599999999886532210 0                          000000  01122244


Q ss_pred             HHHHHHhccC----CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHH--HhhhCCCCCCHHHHHHHHHhhh
Q psy2812          77 EEYLVLKDLS----VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ--GMKKRGVSLSEDQIAYILYGTV  149 (152)
Q Consensus        77 ~e~~~~~~~~----~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~l~~~~~~~~~~qi~  149 (152)
                      +|+..+..+.    +.+++ ..-.+++     +-.+.-.|+|||++|-.+.+...  ........+.+.-+..++.|+.
T Consensus       210 ~EA~n~~~~~~nf~~~~~v-~VP~V~w-----e~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~  282 (517)
T COG0661         210 REAANAERFRENFKDDPDV-YVPKVYW-----EYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLL  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCe-Eeceeeh-----hccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            5555555432    12332 2222222     33455789999999988888742  2111111345556666666664

>KOG1240|consensus

Probab=96.21  E-value=0.001  Score=53.90  Aligned_cols=107  Identities=16%  Similarity=0.211  Sum_probs=76.6

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCC--CchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP--ENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ++...+.||++.|=+|.++++  ....+++|++-+..  .....+.+.+         .|+. ..... +||++.+....
T Consensus        24 e~~~~~~LGstRFlKv~r~k~--~eG~vVvKVFvk~~p~~sL~~~~qrL---------~~ik-~~l~~-~pn~lPfqk~~   90 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKD--REGLVVVKVFVKQDPTISLRPFKQRL---------EEIK-FALMK-APNCLPFQKVL   90 (1431)
T ss_pred             ceeeecccCchhhhhhhhccC--CCceEEEEEEeccCCCCCchHHHHHH---------HHHH-HHhhc-CCcccchHHHH
Confidence            788999999999999999975  44458999875432  1223333322         3333 33334 99999988776


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            .++...|||-+|. ..+|+|.+.   . ++.+..-+-+.|+.|++.|
T Consensus        91 ------~t~kAAylvRqyv-khnLyDRlS---T-RPFL~~iEKkWiaFQLL~a  132 (1431)
T KOG1240|consen   91 ------VTDKAAYLVRQYV-KHNLYDRLS---T-RPFLVLIEKKWIAFQLLKA  132 (1431)
T ss_pred             ------HhhHHHHHHHHHH-hhhhhhhhc---c-chHHHHHHHHHHHHHHHHH
Confidence                  6788899999999 568888873   2 3358888888999999877

>PRK10593 hypothetical protein; Provisional

Probab=95.75  E-value=0.11  Score=36.78  Aligned_cols=84  Identities=19%  Similarity=0.223  Sum_probs=52.5

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC--CCcceeeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH--PNIPSFYGLYL   99 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~l~~~~~   99 (152)
                      ..-.+.||.|..+.||.... .++ .+.+|..+. ......            +..|...++.+...  ..+++.++.+.
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~-~~~~~~------------~~~Ea~~L~~L~~~~~vpVP~V~~~~~   80 (297)
T PRK10593         16 LSRVECISEQPYAALWALYD-SQG-NPMPLMARS-FSTPGV------------AQQEAWKLSMLARSGTVRMPTVYGVMT   80 (297)
T ss_pred             hheeeecCCccceeEEEEEc-CCC-CEEEEEecc-cccchH------------HHHHHHHHHHHccCCCCCcCcEEEEec
Confidence            34467899999999998863 223 456676432 111111            34677777766533  46777776551


Q ss_pred             ecCCCCCCceEEEEEcccCCCChH
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~  123 (152)
                      .   ....+..++|||+++|+++.
T Consensus        81 ~---~~~~g~~~LVmE~i~G~~~~  101 (297)
T PRK10593         81 H---EQSPGPDVLLLERLRGVSVE  101 (297)
T ss_pred             c---CCcCCCeEEEEeccCCEecC
Confidence            1   02346689999999987664

>KOG1235|consensus

Probab=95.70  E-value=0.088  Score=40.27  Aligned_cols=107  Identities=22%  Similarity=0.298  Sum_probs=60.8

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch--hhH----------------------HHHH--HHhhhhhHHHHH
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI--EEI----------------------EEEY--LVLKDLSIEEEY   79 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~----------------------~~~~--~~~~~~~~~~e~   79 (152)
                      +.||.-+.|.|++++.+. |+.||+|+..+.....  .+.                      ..|+  ....++.+.+|+
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            578999999999999755 9999999887543221  000                      0011  011123345555


Q ss_pred             HHHhccCC---CCC------cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHH
Q psy2812          80 LVLKDLSV---HPN------IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI  144 (152)
Q Consensus        80 ~~~~~~~~---~~~------i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~  144 (152)
                      ....+...   |-+      |++++-        +-...-.|+|||++|..+.|+- .+.+.+  ++...+...
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--------~~st~RVLtME~~~G~~i~Dl~-~i~~~g--i~~~~i~~~  308 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--------DLSTKRVLTMEYVDGIKINDLD-AIDKRG--ISPHDILNK  308 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--------hcCcceEEEEEecCCccCCCHH-HHHHcC--CCHHHHHHH
Confidence            54333211   323      444333        2345578999999998887764 233333  565554443

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=95.27  E-value=0.23  Score=33.71  Aligned_cols=73  Identities=22%  Similarity=0.275  Sum_probs=45.8

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCcceeeeeeeecCCC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l~~~~~~~~~~  104 (152)
                      ..||+|.-+.||+.    .+..+++|...... ....            ..+|..++..+... -.+++.+.+.      
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~------------i~~E~~~l~~l~~~glpvP~~~~~~------   63 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKET------------IKREFDASRKVFSLGIPTPHPFDLV------   63 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHH------------HHHHHHHHHHHHHcCCCCCceEEEE------
Confidence            57899999999974    24456777665322 1111            23566666665422 2356666665      


Q ss_pred             CCCceEEEEEcccCCCC
Q psy2812         105 PEEDQLWFVMELCTGGS  121 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~  121 (152)
                      +..+...++||+++|.+
T Consensus        64 ~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        64 EDGGRLGLIYELIVGKR   80 (226)
T ss_pred             ecCCeeeeeeeecCCcc
Confidence            55666789999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.00  E-value=0.28  Score=32.67  Aligned_cols=82  Identities=18%  Similarity=0.282  Sum_probs=50.3

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCcceeeeeeeecCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSFYGLYLRRGG  103 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l~~~~~~~~~  103 (152)
                      ++.++.|..+.+|.+....  ..+++|..... .....            +.+|..++..+..+ ..+++++..... . 
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~------------~~~e~~~~~~l~~~~~pvP~~~~~~~~-~-   64 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAER------------LRREAAVLRQLAEHGIPVPRVLAFDTS-D-   64 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHH------------HHHHHHHHHHHHHTTSBS--EEEEEEE-T-
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHH------------HHHHHHHHHHHHhcCCCCceEEeeccc-c-
Confidence            5678999999999998643  58888876532 01111            33566666665423 235566653211 1 


Q ss_pred             CCCCceEEEEEcccCCCChHH
Q psy2812         104 QPEEDQLWFVMELCTGGSVTD  124 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~  124 (152)
                       ......+++|++++|.++..
T Consensus        65 -~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   65 -EFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             -EETSEEEEEEEEESSEEHHH
T ss_pred             -cccccceEEEEEeccccccc
Confidence             23445899999999887766

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=94.96  E-value=0.16  Score=35.55  Aligned_cols=92  Identities=24%  Similarity=0.282  Sum_probs=61.4

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh-----------HHHHHHHhhhhhHHHHHHHHhccCCC-C
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE-----------IEEEYLVLKDLSIEEEYLVLKDLSVH-P   89 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~-----------~~~~~~~~~~~~~~~e~~~~~~~~~~-~   89 (152)
                      ..+...||.|.=+.||.|.+ ..|..+++|.=+........           ....+.....+...+|..+|.++.+. -
T Consensus        93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            45678899999999999986 46788999965432211111           11123334455678999999999743 3


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHH
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD  124 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~  124 (152)
                      .|++.++          .+.-.++||+++|-.|..
T Consensus       172 ~VP~P~~----------~nRHaVvMe~ieG~eL~~  196 (304)
T COG0478         172 KVPKPIA----------WNRHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCCCccc----------cccceeeeehcccceeec
Confidence            5666554          355789999998866544

>KOG1023|consensus

Probab=94.81  E-value=0.051  Score=40.94  Aligned_cols=57  Identities=21%  Similarity=0.412  Sum_probs=44.2

Q ss_pred             ccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812          84 DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        84 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                      .+. |.|+.++++..+      ..+..+++.+||..|+|.|.+..   ....++......++++|++
T Consensus         3 ~l~-h~n~~~f~g~~~------~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~   59 (484)
T KOG1023|consen    3 QLD-HDNLNKFIGASV------DGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISK   59 (484)
T ss_pred             ccc-hhhhhhheeeEe------cCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHH
Confidence            444 999999999995      45889999999999999999953   3345777777677666653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.79  E-value=0.2  Score=35.32  Aligned_cols=37  Identities=30%  Similarity=0.489  Sum_probs=32.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCC
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP   57 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~   57 (152)
                      .+...+.||.|+++.||.+.+..+++.+|+|+.....
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~   49 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA   49 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc
Confidence            5677889999999999999999999999999876433

>KOG3087|consensus

Probab=94.21  E-value=1.1  Score=29.98  Aligned_cols=95  Identities=19%  Similarity=0.151  Sum_probs=52.3

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      .++.+-+|+=+.|+++..  .|+.+.+|.=... ..........  +..-....|+.++.++. --.|.-..-++     
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K-~YRHP~LD~k--Ltr~Rt~~Ear~l~k~~-~~GI~~P~l~~-----   79 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSK-RYRHPALDQK--LTRKRTKQEARLLAKCR-ALGIPAPRLIF-----   79 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccc-cccchHHHHH--HHHHHHHHHHHHHHHHH-HhCCCCceEEE-----
Confidence            466788899888888864  6777777753211 1111111111  11112346888777654 32333222233     


Q ss_pred             CCCCceEEEEEcccCC-CChHHHHHHhh
Q psy2812         104 QPEEDQLWFVMELCTG-GSVTDLVQGMK  130 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~-g~L~~~l~~~~  130 (152)
                       .+.+.-.+.|||++| -++.+++...-
T Consensus        80 -~D~~~~~i~ME~~~g~~~vk~~i~~~~  106 (229)
T KOG3087|consen   80 -IDTYGGQIYMEFIDGASTVKDFILSTM  106 (229)
T ss_pred             -EecCCCeEEEEeccchhHHHHHHHHHc
Confidence             234456788999976 47778876433

>KOG2270|consensus

Probab=94.02  E-value=0.23  Score=36.60  Aligned_cols=110  Identities=25%  Similarity=0.221  Sum_probs=65.5

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchh--------h-------HHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE--------E-------IEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~--------~-------~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      +-..|..|.=+.||.+. ..+|..+|||+.+-+....+        +       .....+.|-..+..+|+.-+.+++ .
T Consensus       148 inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~-~  225 (520)
T KOG2270|consen  148 INGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLN-N  225 (520)
T ss_pred             cccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHH-h
Confidence            34467778888999987 46788899998764422111        0       112334455667889999999887 6


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHh
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG  147 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~q  147 (152)
                      ..|+..-.+.+        ..-.|||+|+. ++-+-.-   +-....++...+..+-.|
T Consensus       226 aGIP~PePIlL--------k~hVLVM~FlG-rdgw~aP---kLKd~~ls~~ka~~~Y~~  272 (520)
T KOG2270|consen  226 AGIPCPEPILL--------KNHVLVMEFLG-RDGWAAP---KLKDASLSTSKARELYQQ  272 (520)
T ss_pred             cCCCCCCceee--------ecceEeeeecc-CCCCcCc---ccccccCChHHHHHHHHH
Confidence            66665555442        22468999994 4432221   111224665555544433

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=93.96  E-value=0.52  Score=34.95  Aligned_cols=86  Identities=22%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc-hhh--HHHHHHHhhhhhHHHHHHHHhccCC--CCCccee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-IEE--IEEEYLVLKDLSIEEEYLVLKDLSV--HPNIPSF   94 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~-~~~--~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~l   94 (152)
                      +... .+.||.|.+..||++.....++.+.+|.-.+.... .+.  ...+.       ...|...|..+..  ..+++++
T Consensus        27 ~~~~-~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR-------~~~Eae~L~~l~~~~p~~VPkV   98 (401)
T PRK09550         27 ALLT-AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDR-------ARIEAEALKIQAKYVPDLVPKV   98 (401)
T ss_pred             ccce-eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHH-------HHHHHHHHHHHHhhCCCCCCeE
Confidence            3344 46799999999999987433347888975321100 000  00000       2245555554322  3467777


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCC
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGS  121 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~  121 (152)
                      +...        ++..+++||++++..
T Consensus        99 ~~~D--------~~~~~lVME~L~~~~  117 (401)
T PRK09550         99 YHYD--------EELAVTVMEDLSDHK  117 (401)
T ss_pred             EEEC--------CCCCEEEEecCCCcc
Confidence            7654        355789999998654

>KOG1033|consensus

Probab=93.52  E-value=0.01  Score=44.42  Aligned_cols=71  Identities=23%  Similarity=0.432  Sum_probs=51.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..++.....+|.|+||.|+.+....++..+|||.|.....  +.....        ..+|+..+.++. |+++++++..|
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~--e~s~~r--------vl~~~~s~a~fe-h~g~~~~~ha~  116 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNR--EESRSR--------VLREVSSLAEFE-HPGIKRYFHAW  116 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccch--hhhhhh--------hhccccchhhhc-ccchhhheece
Confidence            3467888999999999999999877777899998874322  111111        335666677777 99999998877


Q ss_pred             ee
Q psy2812          99 LR  100 (152)
Q Consensus        99 ~~  100 (152)
                      ..
T Consensus       117 ~~  118 (516)
T KOG1033|consen  117 YE  118 (516)
T ss_pred             ec
Confidence            53

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.45  E-value=0.6  Score=31.76  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=47.3

Q ss_pred             Eeeccce-eEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCC
Q psy2812          27 LIGEGTY-GEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQP  105 (152)
Q Consensus        27 ~lg~G~~-g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~  105 (152)
                      .|..|.. ..||+...  .+..+.+|......  ...            +.+|+.++..+.++--+++++...      .
T Consensus         5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~--~~~------------~~~E~~~l~~l~~~~~vP~v~~~~------~   62 (244)
T cd05150           5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP--TYE------------LEREAERLRWLAGKLPVPEVIDYG------S   62 (244)
T ss_pred             ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc--ccc------------hHHHHHHHHHHHhcCCCCeEEEEE------e
Confidence            3445555 56888864  23567777665321  111            335777777665454466777666      4


Q ss_pred             CCceEEEEEcccCCCChHHH
Q psy2812         106 EEDQLWFVMELCTGGSVTDL  125 (152)
Q Consensus       106 ~~~~~~lv~e~~~~g~L~~~  125 (152)
                      ..+..+++||+++|.++...
T Consensus        63 ~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          63 DDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCccEEEEEeeCCccHhHh
Confidence            44668899999998777543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN00181 protein SPA1-RELATED; Provisional

Probab=93.29  E-value=0.03  Score=44.87  Aligned_cols=59  Identities=14%  Similarity=0.125  Sum_probs=40.0

Q ss_pred             CCcceeeeeeeec--CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          89 PNIPSFYGLYLRR--GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        89 ~~i~~l~~~~~~~--~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +||.++++.|-..  ++ .....+++++|++ +++|.+++..   ....+++..++.++.||++|+
T Consensus        33 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al   93 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDG-LDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIV   93 (793)
T ss_pred             HHHHHhhcccCCccccc-cccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHH
Confidence            4666666654110  11 1234578888987 7799999952   223599999999999999873

>KOG4158|consensus

Probab=93.14  E-value=0.15  Score=37.70  Aligned_cols=61  Identities=21%  Similarity=0.299  Sum_probs=45.1

Q ss_pred             cCCCCCcceeeeeeeec---------------------CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHH
Q psy2812          85 LSVHPNIPSFYGLYLRR---------------------GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY  143 (152)
Q Consensus        85 ~~~~~~i~~l~~~~~~~---------------------~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~  143 (152)
                      +..||||+++...|.++                     .+......+|+||... ..+|..++..  +   ..+......
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~--~---~~s~r~~~~  345 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWT--R---HRSYRTGRV  345 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhc--C---CCchHHHHH
Confidence            34599999999888663                     1223457799999988 4588888842  1   367788888


Q ss_pred             HHHhhhcc
Q psy2812         144 ILYGTVQV  151 (152)
Q Consensus       144 ~~~qi~~a  151 (152)
                      ++.|+++|
T Consensus       346 ~laQlLEa  353 (598)
T KOG4158|consen  346 ILAQLLEA  353 (598)
T ss_pred             HHHHHHHH
Confidence            88999876

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=92.07  E-value=0.83  Score=30.64  Aligned_cols=102  Identities=15%  Similarity=0.144  Sum_probs=58.1

Q ss_pred             CCCceEEEEEeeccce-eEEEEEEEcCCCCeEEEEEeec---CCC-ch-hhHH-HHH--H--HhhhhhHHHHHHHHhccC
Q psy2812          18 PRNKFKLQELIGEGTY-GEVYWAKDVETGDHVAIKIMEN---IPE-NI-EEIE-EEY--L--VLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~-g~V~~~~~~~~~~~~a~K~i~~---~~~-~~-~~~~-~~~--~--~~~~~~~~~e~~~~~~~~   86 (152)
                      -..+++.++.||.|.. |.|+++.-  .|..||+|....   ... .. +... .+.  .  ....-.+.+|......+.
T Consensus        35 h~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk  112 (207)
T PF13095_consen   35 HGDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK  112 (207)
T ss_pred             CCCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence            3478999999999999 99999974  677999998331   110 00 0000 000  0  011112557777766654


Q ss_pred             C--CCCc--ceeeeeeeecC------------CCCCCceEEEEEcccCCCC
Q psy2812          87 V--HPNI--PSFYGLYLRRG------------GQPEEDQLWFVMELCTGGS  121 (152)
Q Consensus        87 ~--~~~i--~~l~~~~~~~~------------~~~~~~~~~lv~e~~~~g~  121 (152)
                      .  +.++  ++.+++...+.            .........||.||.+...
T Consensus       113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~  163 (207)
T PF13095_consen  113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP  163 (207)
T ss_pred             hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc
Confidence            3  3344  77777764431            0012234567888876543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=92.04  E-value=1.1  Score=29.50  Aligned_cols=81  Identities=26%  Similarity=0.297  Sum_probs=42.8

Q ss_pred             EEEEEEEcCCCCeEEEEEeecCCCchhhHH---------------HHHHHhhhhhHHHHHHHHhccCCC-CCcceeeeee
Q psy2812          35 EVYWAKDVETGDHVAIKIMENIPENIEEIE---------------EEYLVLKDLSIEEEYLVLKDLSVH-PNIPSFYGLY   98 (152)
Q Consensus        35 ~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~---------------~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l~~~~   98 (152)
                      .||.|.. ..+..+|+|.-+.....-+...               .........+..+|...|..+... -++++++...
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            3788875 5667899998764322211110               111222334578999999998743 3677777543


Q ss_pred             eecCCCCCCceEEEEEcccC--CCChHHHH
Q psy2812          99 LRRGGQPEEDQLWFVMELCT--GGSVTDLV  126 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~--~g~L~~~l  126 (152)
                            .    -.++|||++  |..+..+.
T Consensus        80 ------~----~~ivME~I~~~G~~~~~l~   99 (188)
T PF01163_consen   80 ------R----NVIVMEYIGEDGVPLPRLK   99 (188)
T ss_dssp             ------T----TEEEEE--EETTEEGGCHH
T ss_pred             ------C----CEEEEEecCCCccchhhHH
Confidence                  1    369999998  55554443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.79  E-value=2.8  Score=28.24  Aligned_cols=77  Identities=22%  Similarity=0.295  Sum_probs=44.1

Q ss_pred             EEEeeccceeEEEEEEEcC-CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          25 QELIGEGTYGEVYWAKDVE-TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      ++.|..|-...+|++.... .+..+++|........  ...          ..+|..++..+..+.-.++++...     
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--~~d----------~~~E~~~~~~l~~~gl~P~v~~~~-----   65 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--IID----------RERELRIHKLLSKHGLAPKLYATF-----   65 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--eec----------HHHHHHHHHHHHhCCCCCeEEEEe-----
Confidence            4567777778899886433 2567888865432111  000          124666666664333345555433     


Q ss_pred             CCCCceEEEEEcccCCCChH
Q psy2812         104 QPEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~  123 (152)
                       + .   .++|||++|.++.
T Consensus        66 -~-~---~~l~e~i~G~~l~   80 (235)
T cd05157          66 -Q-N---GLIYEFIPGRTLE   80 (235)
T ss_pred             -C-C---cEEEEeeCCCcCC
Confidence             2 1   3799999987653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=91.06  E-value=2.7  Score=29.26  Aligned_cols=84  Identities=23%  Similarity=0.220  Sum_probs=52.4

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHH-------------HHHHhhhhhHHHHHHHHhccCC-CCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE-------------EYLVLKDLSIEEEYLVLKDLSV-HPN   90 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~-------------~~~~~~~~~~~~e~~~~~~~~~-~~~   90 (152)
                      ...|++|.-+.||++.. .++..+|+|+........+....             ....+...+..+|..-|..+.. +-.
T Consensus        53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            44677888889999974 56788999988754433222111             1122223456778887777642 345


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCC
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTG  119 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~  119 (152)
                      +++.+...          .-.++|||+..
T Consensus       132 vP~Pi~~~----------~nVLvMEfIg~  150 (268)
T COG1718         132 VPEPIAFR----------NNVLVMEFIGD  150 (268)
T ss_pred             CCCceeec----------CCeEEEEeccC
Confidence            56666554          24699999843

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=90.84  E-value=0.055  Score=32.86  Aligned_cols=30  Identities=23%  Similarity=0.325  Sum_probs=25.3

Q ss_pred             EEeeccceeEEEEEEEcCCCCeEEEEEeecC
Q psy2812          26 ELIGEGTYGEVYWAKDVETGDHVAIKIMENI   56 (152)
Q Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~   56 (152)
                      +.|++|+.|.||++.. .+|+.+|+|+..+.
T Consensus        17 ~PlasASiaQVh~a~l-~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARL-KDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeee-cccchhhhhhcchH
Confidence            5799999999999986 44899999988753

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.61  E-value=3.6  Score=27.40  Aligned_cols=87  Identities=21%  Similarity=0.239  Sum_probs=49.3

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEE-eecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC-CCCcceeeeeeeecCCC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKI-MENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV-HPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~-i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~l~~~~~~~~~~  104 (152)
                      .+++|+=+.|+.+..  -|..+.+|. +++.-. ..+....+..   ....+|+.++..+.. .-+++.++++.      
T Consensus         3 ~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR-~p~LD~klrr---~Rt~~Earil~~a~~~GV~~P~v~dvD------   70 (204)
T COG3642           3 LIKQGAEAIIYLTDF--LGLPAVVKERIPKRYR-HPELDEKLRR---ERTRREARILAKAREAGVPVPIVYDVD------   70 (204)
T ss_pred             hhhCCcceeEEeeec--cCcceEEEeecCcccC-ChHHHHHHHH---HHHHHHHHHHHHHHHcCCCCCeEEEEc------
Confidence            466788788887754  333455554 222211 1111111110   113478888887652 34455555543      


Q ss_pred             CCCceEEEEEcccCCCChHHHHH
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQ  127 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~  127 (152)
                        ++.-.|+|||++|..|.+.+.
T Consensus        71 --~~~~~I~me~I~G~~lkd~l~   91 (204)
T COG3642          71 --PDNGLIVMEYIEGELLKDALE   91 (204)
T ss_pred             --CCCCEEEEEEeCChhHHHHHH
Confidence              555779999999888887874

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=88.69  E-value=1  Score=29.65  Aligned_cols=65  Identities=20%  Similarity=0.283  Sum_probs=43.6

Q ss_pred             HHHHHHHhccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          76 EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        76 ~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..|..+++.+.+.++++++++.+         + -++++||...+++.......... ..-++.....++.++++.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C---------G-~~~v~E~~~~~~~~~~~~~l~~~-~~~~w~~R~~iA~~lL~~   71 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC---------G-RFYVVEYVGAGSLYGIYRPLSQF-LQSPWEQRAKIALQLLEL   71 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC---------C-CEEEEEeecCccccccccccccc-cccCHHHHHHHHHHHHHH
Confidence            46888899988557999999988         2 25688999766554210000010 126888999999888754

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=87.03  E-value=7.7  Score=27.52  Aligned_cols=77  Identities=19%  Similarity=0.251  Sum_probs=40.4

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC--CCCCcceeeeeee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPSFYGLYL   99 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~l~~~~~   99 (152)
                      .+-.+.++-|....+|...  .+++.+-+|.-...  ...-            +..|..-|+.+.  ..-.+++.+... 
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~--~~~~------------f~~Ea~gL~~L~~~~~~~vP~vi~~G-   81 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES--GRDM------------FEGEAEGLKALAEANPIRVPKVIAWG-   81 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG--GCCH------------HHHHHHHHHHHCHTTTSBS--EEEEE-
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecChh--hHHH------------HHHHHHHHHHHHhcCCCCCCeEEEEE-
Confidence            3446678888888888876  56778888877621  1122            223444444442  145677888776 


Q ss_pred             ecCCCCCCceEEEEEcccCCC
Q psy2812         100 RRGGQPEEDQLWFVMELCTGG  120 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g  120 (152)
                           +..+..+++|||++.+
T Consensus        82 -----~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   82 -----EYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             -----E-SSCCEEEEE-----
T ss_pred             -----eecCCceEEEEeecCC
Confidence                 4455569999999765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG0576|consensus

Probab=82.79  E-value=0.28  Score=38.47  Aligned_cols=82  Identities=18%  Similarity=0.293  Sum_probs=54.4

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC-cce
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN-IPS   93 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-i~~   93 (152)
                      ..+....+......++++++++++.+..... ....+.+...        .        ...-++.+|.+++ ||| .+.
T Consensus       237 lkDk~kws~~fh~fvK~altknpKkRptaek-lL~h~fvs~~--------l--------~~rl~~eLLdK~n-~P~~~v~  298 (829)
T KOG0576|consen  237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEK-LLQHPFVSQT--------L--------SRRLAIELLDKVN-NPNPVVR  298 (829)
T ss_pred             ccCCccchHHHHHHHHHHhcCCCccCCChhh-heeceeeccc--------h--------hhHHHHHHHHHcc-CCCCccc
Confidence            3444455555566788999999888643332 2234544432        0        0224778899998 999 666


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCC
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGG  120 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g  120 (152)
                      .++.+      +.+.+.++.++++.+|
T Consensus       299 ~~~d~------~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  299 YLEDY------DGEDYLWIPMRICSTG  319 (829)
T ss_pred             ccccC------CcccccchhhhhhcCC
Confidence            66666      7888999999999877

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=82.34  E-value=4.3  Score=27.47  Aligned_cols=78  Identities=17%  Similarity=0.197  Sum_probs=41.0

Q ss_pred             EEEeeccceeE-EEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC--CCcceeeeeeeec
Q psy2812          25 QELIGEGTYGE-VYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH--PNIPSFYGLYLRR  101 (152)
Q Consensus        25 ~~~lg~G~~g~-V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~l~~~~~~~  101 (152)
                      ++.++.|+... ||+..     ..+++|..... .....            +.+|..++..+..+  -.++..+....  
T Consensus         2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~-~~~~~------------~~~E~~~l~~L~~~~~v~vP~~~~~~~--   61 (235)
T cd05155           2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAA-GYAGQ------------VRKEQRWLPRLAPHLPLPVPEPLGKGE--   61 (235)
T ss_pred             ceeccCCCcccceEEcC-----CceEEEcCCcc-chHHH------------HHHHHHHHHHHhccCCCCCCceeecCC--
Confidence            35677777765 88652     24566653321 11111            34677777766522  13444443320  


Q ss_pred             CCCCCCceEEEEEcccCCCChH
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~  123 (152)
                       ..+..+..+++|++++|.++.
T Consensus        62 -~~~~~~~~~~l~~~i~G~~l~   82 (235)
T cd05155          62 -PGEGYPWPWSVYRWLEGETAT   82 (235)
T ss_pred             -CccCCCcceEEEEeecCCCCC
Confidence             001123458899999987764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=82.31  E-value=13  Score=25.42  Aligned_cols=35  Identities=14%  Similarity=0.147  Sum_probs=25.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME   54 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~   54 (152)
                      ...+|+..+.+-......|.+..  -+++.+.+|..+
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr   63 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPR   63 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccc
Confidence            34578888888777777777775  367788888765

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02721 ycfN_thiK thiamine kinase

Probab=82.14  E-value=4.7  Score=27.66  Aligned_cols=72  Identities=15%  Similarity=0.254  Sum_probs=39.1

Q ss_pred             eeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCCC
Q psy2812          28 IGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE  107 (152)
Q Consensus        28 lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~~  107 (152)
                      +..|-...+|+..  .++..+++|..........  ..         ...|..+++.+..+.-.++++...      .  
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~--~~---------r~~E~~~l~~l~~~g~~P~~i~~~------~--   62 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALG--VD---------RQREYQILQALSALGLAPKPILVN------E--   62 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCccccccc--Cc---------HHHHHHHHHHHHhcCCCCceEEEe------C--
Confidence            4456666788775  3455677776432211100  00         235667777665332234444433      2  


Q ss_pred             ceEEEEEcccCCCCh
Q psy2812         108 DQLWFVMELCTGGSV  122 (152)
Q Consensus       108 ~~~~lv~e~~~~g~L  122 (152)
                        -++++||++|..+
T Consensus        63 --~~~v~e~i~G~~~   75 (256)
T TIGR02721        63 --HWLLVEWLEGEVI   75 (256)
T ss_pred             --CEEEEEeccCccc
Confidence              2589999988664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1035|consensus

Probab=81.39  E-value=1.1  Score=37.75  Aligned_cols=43  Identities=14%  Similarity=0.196  Sum_probs=32.0

Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCC-CHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL-SEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l-~~~~~~~~~~qi~~a  151 (152)
                      +..-.+||.||||+..++.+++++..    .. ..+..+.+|+||+++
T Consensus       666 q~~~~LYIQMEyCE~~ll~~iI~~N~----~~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  666 QKPLILYIQMEYCEKTLLRDIIRRNH----FNSQRDEAWRLFREILEG  709 (1351)
T ss_pred             ccceEEEEEHhhhhhhHHHHHHHhcc----cchhhHHHHHHHHHHHHH
Confidence            34577999999999877777774311    12 588999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-19
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		9e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		9e-09
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		9e-09
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-08
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-08
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		8e-08
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		4e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		9e-04

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLV 69
           I++ +LRDP   F+L EL+G GTYG+VY  + V+TG   A                    
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----------- 62
Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
            ++  I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDL++  
Sbjct: 63  -EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 130 KKRGVSLSEDQIAYIL 145
           K  G +L E+ IAYI 
Sbjct: 122 K--GNTLKEEWIAYIC 135

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 36/150 (24%)
Query: 8   RHINIDSL-RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXX 66
           + ++ DSL + P   F + E +GEG+YG VY A   ETG  VA                 
Sbjct: 16  KKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVA----------------- 58
Query: 67  YLVLKDLSIEEEYL-VLKDLSV-----HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
              +K + +E +   ++K++S+      P++  +YG Y +         LW VME C  G
Sbjct: 59  ---IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN------TDLWIVMEYCGAG 109
Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
           SV+D++   + R  +L+ED+IA IL  T++
Sbjct: 110 SVSDII---RLRNKTLTEDEIATILQSTLK 136

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
           L +  +I S+ DP+ K+   E IG+G  G VY A DV TG  VA                
Sbjct: 7   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 61
Query: 66  XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                K+L I  E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 62  -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 108
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
           V         + E QIA +    +Q 
Sbjct: 109 VT-----ETCMDEGQIAAVCRECLQA 129

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
           L +  +I S+ DP+ K+   E IG+G  G VY A DV TG  VA                
Sbjct: 6   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66  XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                K+L I  E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 61  -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
           V         + E QIA +    +Q 
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
           L +  +I S+ DP+ K+   E IG+G  G VY A DV TG  VA                
Sbjct: 6   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66  XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                K+L I  E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 61  -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
           V         + E QIA +    +Q 
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
           L +  +I S+ DP+ K+   E IG+G  G VY A DV TG  VA                
Sbjct: 6   LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66  XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                K+L I  E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+
Sbjct: 61  -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
           V         + E QIA +    +Q 
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 12  IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLK 71
           I S+ DP+ K+   E IG+G  G VY A DV TG  VA                     K
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----------K 62
Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
           +L I  E LV+++ + +PNI ++   YL        D+LW VME   GGS+TD+V     
Sbjct: 63  ELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDVVT---- 110
Query: 132 RGVSLSEDQIAYILYGTVQV 151
               + E QIA +    +Q 
Sbjct: 111 -ETCMDEGQIAAVCRECLQA 129

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F     IG G++G VY+A+DV   + VA                     K   I 
Sbjct: 51  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------KWQDII 102
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E   L+ L  HPN   + G YLR      E   W VME C  GS +DL++  KK    L
Sbjct: 103 KEVRFLQKLR-HPNTIQYRGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK---PL 151
Query: 137 SEDQIAYILYGTVQ 150
            E +IA + +G +Q
Sbjct: 152 QEVEIAAVTHGALQ 165

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F     IG G++G VY+A+DV   + VA                     K   I 
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------KWQDII 63
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E   L+ L  HPN   + G YLR      E   W VME C  GS +DL++  KK    L
Sbjct: 64  KEVRFLQKLR-HPNTIQYRGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK---PL 112
Query: 137 SEDQIAYILYGTVQ 150
            E +IA + +G +Q
Sbjct: 113 QEVEIAAVTHGALQ 126

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
           R+ ++LQE+IG G    V  A      + VA                  L     S++E 
Sbjct: 14  RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-------------LEKCQTSMDEL 60
Query: 79  YLVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-----QGMKK 131
              ++ +S   HPNI S+Y  ++ +      D+LW VM+L +GGSV D++     +G  K
Sbjct: 61  LKEIQAMSQCHHPNIVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHK 114
Query: 132 RGVSLSEDQIAYIL 145
            GV L E  IA IL
Sbjct: 115 SGV-LDESTIATIL 127

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
           R+ ++LQE+IG G    V  A      + VA                   +LK++    +
Sbjct: 9   RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE----LLKEIQAMSQ 64
Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-----QGMKKRG 133
                    HPNI S+Y  ++ +      D+LW VM+L +GGSV D++     +G  K G
Sbjct: 65  -------CHHPNIVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 134 VSLSEDQIAYIL 145
           V L E  IA IL
Sbjct: 112 V-LDESTIATIL 122

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   +++   +G+G +G+VY AK+ ETG   A                    L+D  +E
Sbjct: 8   DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---------LEDYIVE 58
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E L   D   HP I    G Y   G      +LW ++E C GG+V D +     RG  L
Sbjct: 59  IEILATCD---HPYIVKLLGAYYHDG------KLWIMIEFCPGGAV-DAIMLELDRG--L 106
Query: 137 SEDQIAYI 144
           +E QI  +
Sbjct: 107 TEPQIQVV 114

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   +++   +G+G +G+VY AK+ ETG   A                    L+D  +E
Sbjct: 16  DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---------LEDYIVE 66
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E L   D   HP I    G Y   G      +LW ++E C GG+V D +     RG  L
Sbjct: 67  IEILATCD---HPYIVKLLGAYYHDG------KLWIMIEFCPGGAV-DAIMLELDRG--L 114
Query: 137 SEDQIAYI 144
           +E QI  +
Sbjct: 115 TEPQIQVV 122

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYL 80
           + +++ ++ EG +  VY A+DV +G   A                     K+ +I +E  
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE-----------KNRAIIQEVC 77
Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEED----QLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +K LS HPNI  F        G+ E D    +   + ELC  G + + ++ M+ RG  L
Sbjct: 78  FMKKLSGHPNIVQFCSAA--SIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRG-PL 133
Query: 137 SEDQIAYILYGTVQV 151
           S D +  I Y T + 
Sbjct: 134 SCDTVLKIFYQTCRA 148

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DPR        IGEG+ G V  A +  TG  VA                  L+  ++ I 
Sbjct: 42  DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRE-----LLFNEVVIM 96
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        D+LW VME   GG++TD+V   +     +
Sbjct: 97  RDYH-------HDNVVDMYSSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 138
Query: 137 SEDQIAYILYGTVQ 150
           +E+QIA +    ++
Sbjct: 139 NEEQIATVCLSVLR 152

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F   E IG+G++GEV+   D  T   VA                         I+
Sbjct: 4   DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 53
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E  VL      P +  +YG YL+      + +LW +ME   GGS  DL++        L
Sbjct: 54  QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 101
Query: 137 SEDQIAYIL 145
            E QIA IL
Sbjct: 102 DETQIATIL 110

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F   E IG+G++GEV+   D  T   VA                         I+
Sbjct: 4   DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 53
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E  VL      P +  +YG YL+      + +LW +ME   GGS  DL++        L
Sbjct: 54  QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 101
Query: 137 SEDQIAYIL 145
            E QIA IL
Sbjct: 102 DETQIATIL 110

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F   E IG+G++GEV+   D  T   VA                         I+
Sbjct: 19  DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 68
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E  VL      P +  +YG YL+      + +LW +ME   GGS  DL++        L
Sbjct: 69  QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 116
Query: 137 SEDQIAYIL 145
            E QIA IL
Sbjct: 117 DETQIATIL 125

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DP   F   E IG+G++GEV+   D  T   VA                         I+
Sbjct: 24  DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 73
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E  VL      P +  +YG YL+      + +LW +ME   GGS  DL++        L
Sbjct: 74  QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 121
Query: 137 SEDQIAYIL 145
            E QIA IL
Sbjct: 122 DETQIATIL 130

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DPR        IGEG+ G V  A++  +G  VA                  L+  ++ I 
Sbjct: 42  DPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE-----LLFNEVVIM 96
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        ++LW +ME   GG++TD+V       V L
Sbjct: 97  RDYQ-------HFNVVEMYKSYL------VGEELWVLMEFLQGGALTDIVS-----QVRL 138
Query: 137 SEDQIAYILYGTVQ 150
           +E+QIA +    +Q
Sbjct: 139 NEEQIATVCEAVLQ 152

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
           DPR+       IGEG+ G V  A    +G  VA                  L+  ++ I 
Sbjct: 17  DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 71
Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            +Y        H N+   Y  YL        D+LW VME   GG++TD+V   +     +
Sbjct: 72  RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 113
Query: 137 SEDQIAYILYGTVQ 150
           +E+QIA +    +Q
Sbjct: 114 NEEQIAAVCLAVLQ 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-49
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-41
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-40
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-37
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-36
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-35
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-35
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-34
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-34
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-26
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-25
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-24
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-24
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-23
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-22
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-21
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-21
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-21
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-21
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-19
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-19
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-19
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-19
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-19
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-18
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-18
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-18
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-18
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-17
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-17
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-17
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-17
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-16
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-16
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-16
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-16
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-16
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-16
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-16
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-16
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-16
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	7e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-16
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-15
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-15
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-15
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-15
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-15
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-15
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-14
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-14
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-14
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-14
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-14
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-14
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	8e-14
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-14
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-13
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-13
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-13
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-13
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-13
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-13
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-13
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-13
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-13
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-13
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-13
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-12
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-12
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-12
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-12
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-12
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	7e-12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-12
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	8e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-11
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-11
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-11
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-11
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-11
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	6e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	6e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	7e-11
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	9e-11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-10
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-10
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-10
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-10
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-10
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-10
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-10
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-10
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-09
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-09
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-09
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-09
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	9e-09
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-08
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-08
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	6e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-08
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-07
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	3e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	5e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	7e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-05
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-04

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  159 bits (404), Expect = 4e-49
 Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 14/142 (9%)

Query: 9   HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYL 68
            I++ +LRDP   F+L EL+G GTYG+VY  + V+TG   AIK+M+   +  EE      
Sbjct: 13  EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------ 66

Query: 69  VLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG 128
                 I++E  +LK  S H NI ++YG ++++     +DQLW VME C  GSVTDL++ 
Sbjct: 67  ------IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120

Query: 129 MKKRGVSLSEDQIAYILYGTVQ 150
            K    +L E+ IAYI    ++
Sbjct: 121 TKGN--TLKEEWIAYICREILR 140

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  137 bits (347), Expect = 9e-41
 Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 23/150 (15%)

Query: 2   AYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-I 60
           + R    + ++    DP   +++   +G+G +G+VY AK+ ETG   A K++E   E  +
Sbjct: 1   SMRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL 60

Query: 61  EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           E+   E  +L                 HP I    G Y        + +LW ++E C GG
Sbjct: 61  EDYIVEIEILATCD-------------HPYIVKLLGAYYH------DGKLWIMIEFCPGG 101

Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
           +V  +   M +    L+E QI  +    ++
Sbjct: 102 AVDAI---MLELDRGLTEPQIQVVCRQMLE 128

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  136 bits (345), Expect = 2e-40
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 23/147 (15%)

Query: 4   RGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI 63
           R L +       + P   F + E +GEG+YG VY A   ETG  VAIK +  +  +++EI
Sbjct: 13  RQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEI 71

Query: 64  EEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVT 123
            +E  +++                 P++  +YG Y +         LW VME C  GSV+
Sbjct: 72  IKEISIMQQCD-------------SPHVVKYYGSYFK------NTDLWIVMEYCGAGSVS 112

Query: 124 DLVQGMKKRGVSLSEDQIAYILYGTVQ 150
           D+   ++ R  +L+ED+IA IL  T++
Sbjct: 113 DI---IRLRNKTLTEDEIATILQSTLK 136

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  127 bits (322), Expect = 4e-37
 Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 28/154 (18%)

Query: 1   MAYRGLSRHI-NIDSLR-DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENI 56
           MA+  +   +  + +L+ DP   F   E IG+G++GEV+   D  T   VAIKI+  E  
Sbjct: 1   MAHSPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA 60

Query: 57  PENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMEL 116
            + IE+I++E  VL                  P +  +YG YL+      + +LW +ME 
Sbjct: 61  EDEIEDIQQEITVLSQCD-------------SPYVTKYYGSYLK------DTKLWIIMEY 101

Query: 117 CTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
             GGS  DL   ++     L E QIA IL   ++
Sbjct: 102 LGGGSALDL---LEPGP--LDETQIATILREILK 130

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  125 bits (316), Expect = 8e-36
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 19/139 (13%)

Query: 12  IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLK 71
           +    DP   F     IG G++G VY+A+DV   + VAIK M    +   E  ++     
Sbjct: 46  LFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD----- 100

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
              I +E   L+ L  HPN   + G YLR      E   W VME C  GS +DL   ++ 
Sbjct: 101 ---IIKEVRFLQKLR-HPNTIQYRGCYLR------EHTAWLVMEYC-LGSASDL---LEV 146

Query: 132 RGVSLSEDQIAYILYGTVQ 150
               L E +IA + +G +Q
Sbjct: 147 HKKPLQEVEIAAVTHGALQ 165

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  123 bits (311), Expect = 3e-35
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 25/141 (17%)

Query: 11  NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLV 69
            +    DPR        IGEG+ G V  A++  +G  VA+K+M+    +  E +  E ++
Sbjct: 36  MVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVI 95

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
           ++D               H N+   Y  YL        ++LW +ME   GG++TD+V  +
Sbjct: 96  MRDYQ-------------HFNVVEMYKSYLV------GEELWVLMEFLQGGALTDIVSQV 136

Query: 130 KKRGVSLSEDQIAYILYGTVQ 150
           +     L+E+QIA +    +Q
Sbjct: 137 R-----LNEEQIATVCEAVLQ 152

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  121 bits (306), Expect = 8e-35
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 25/138 (18%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKD 72
           S+ DP+ K+   E IG+G  G VY A DV TG  VAI+ M        E I  E LV+++
Sbjct: 14  SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
                          +PNI ++   YL        D+LW VME   GGS+TD+V      
Sbjct: 74  NK-------------NPNIVNYLDSYLV------GDELWVVMEYLAGGSLTDVV-----T 109

Query: 133 GVSLSEDQIAYILYGTVQ 150
              + E QIA +    +Q
Sbjct: 110 ETCMDEGQIAAVCRECLQ 127

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  122 bits (308), Expect = 2e-34
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 7   SRHINIDSLRDPRNKFKLQELIGEG--TYGEVYWAKDVETGDHVAIKIM--ENIP-ENIE 61
                + S       ++L  +IG+G      V  A+   TG++V ++ +  E    E + 
Sbjct: 12  LYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT 71

Query: 62  EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
            ++ E  V K  +             HPNI  +   ++       +++LW V      GS
Sbjct: 72  FLQGELHVSKLFN-------------HPNIVPYRATFIA------DNELWVVTSFMAYGS 112

Query: 122 VTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
             DL+      G  ++E  IAYIL G ++
Sbjct: 113 AKDLICTHFMDG--MNELAIAYILQGVLK 139

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  120 bits (302), Expect = 4e-34
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 25/140 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLS 74
             R+ ++LQE+IG G    V  A      + VAIK +  E    +++E+ +E   +    
Sbjct: 12  INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HPNI S+Y  ++       +D+LW VM+L +GGSV D+++ +  +G 
Sbjct: 72  -------------HPNIVSYYTSFVV------KDELWLVMKLLSGGSVLDIIKHIVAKGE 112

Query: 135 S----LSEDQIAYILYGTVQ 150
                L E  IA IL   ++
Sbjct: 113 HKSGVLDESTIATILREVLE 132

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 99.4 bits (248), Expect = 4e-26
 Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 27/132 (20%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
             R+  +    Q  +G G++GEV+  KD +TG   A+K +      +EE+         L
Sbjct: 52  EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV----ACAGL 107

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
           S              P I   YG         E   +   MEL  GGS+  L   +K+ G
Sbjct: 108 S-------------SPRIVPLYGAVR------EGPWVNIFMELLEGGSLGQL---IKQMG 145

Query: 134 VSLSEDQIAYIL 145
             L ED+  Y L
Sbjct: 146 -CLPEDRALYYL 156

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 97.0 bits (242), Expect = 2e-25
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
               +F   E IG G +G V+       G   AIK     P      E+        ++ 
Sbjct: 8   RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-KKPLAGSVDEQN-------ALR 59

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           E Y     L  H ++  ++  +       E+D +    E C GGS+ D +    +     
Sbjct: 60  EVY-AHAVLGQHSHVVRYFSAWA------EDDHMLIQNEYCNGGSLADAISENYRIMSYF 112

Query: 137 SEDQIAYILY 146
            E ++  +L 
Sbjct: 113 KEAELKDLLL 122

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 95.1 bits (237), Expect = 1e-24
 Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 21/136 (15%)

Query: 17  DPRNKF-KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
               +F K    IG G++  VY   D ET   VA   +++      E +           
Sbjct: 22  SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------F 72

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
           +EE  +LK L  HPNI  FY  +        +  +  V EL T G++   ++  K     
Sbjct: 73  KEEAEMLKGLQ-HPNIVRFYDSWE--STVKGKKCIVLVTELMTSGTLKTYLKRFKV---- 125

Query: 136 LSEDQIAY----ILYG 147
           +    +      IL G
Sbjct: 126 MKIKVLRSWCRQILKG 141

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 95.1 bits (237), Expect = 1e-24
 Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
            + F+   ++G+G +G+V  A++     + AIK + +  E +  I  E ++L  L+    
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN---- 60

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ-------LWFVMELCTGGSVTDLVQGMKK 131
                    H  +  +Y  +L R    +          L+  ME C  G++ DL   +  
Sbjct: 61  ---------HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDL---IHS 108

Query: 132 RGVSLSEDQIAYIL 145
             ++   D+   + 
Sbjct: 109 ENLNQQRDEYWRLF 122

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 94.7 bits (236), Expect = 3e-24
 Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 16/138 (11%)

Query: 13  DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
                     K    IG G YG V       +G  +A+K +     + +E ++       
Sbjct: 15  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQ------- 66

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
             +  +  V+   S  P I  FYG   R      E   W  MEL +              
Sbjct: 67  --LLMDLDVVMRSSDCPYIVQFYGALFR------EGDCWICMELMSTSFDKFYKYVYSVL 118

Query: 133 GVSLSEDQIAYILYGTVQ 150
              + E+ +  I   TV+
Sbjct: 119 DDVIPEEILGKITLATVK 136

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 92.3 bits (230), Expect = 1e-23
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
           S+    +  +    +G G YG V   + V +G  +A+K    I   +   E++ L L DL
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKR---IRATVNSQEQKRL-LMDL 56

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
            I             P   +FYG   R      E  +W  MEL    S+    + +  +G
Sbjct: 57  DI------SMRTVDCPFTVTFYGALFR------EGDVWICMELM-DTSLDKFYKQVIDKG 103

Query: 134 VSLSEDQIAYILYGTVQ 150
            ++ ED +  I    V+
Sbjct: 104 QTIPEDILGKIAVSIVK 120

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 89.7 bits (223), Expect = 2e-22
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 15/127 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F++++ IG G + EVY A  +  G  VA+K +  I + ++               +E 
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV-QIFDLMDAKARA-------DCIKEI 83

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK L+ HPN+  +Y  ++      E+++L  V+EL   G ++ +++  KK+   + E 
Sbjct: 84  DLLKQLN-HPNVIKYYASFI------EDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136

Query: 140 QIAYILY 146
            +     
Sbjct: 137 TVWKYFV 143

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 88.6 bits (220), Expect = 5e-22
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 16/133 (12%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKDLSIEE 77
              +   + +GEG +  V   + +  G   A+K +  +  ++ EE + E  + +  +   
Sbjct: 28  NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN--- 84

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPNI       LR  G   E   W ++     G++ + ++ +K +G  L+
Sbjct: 85  ----------HPNILRLVAYCLRERGAKHE--AWLLLPFFKRGTLWNEIERLKDKGNFLT 132

Query: 138 EDQIAYILYGTVQ 150
           EDQI ++L G  +
Sbjct: 133 EDQILWLLLGICR 145

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 86.2 bits (214), Expect = 2e-21
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIK-IMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
            ++G+GTYG VY  +D+     +AIK I E      + + EE  + K L           
Sbjct: 28  VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK---------- 77

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY- 143
              H NI  + G +       E   +   ME   GGS++ L++         +E  I + 
Sbjct: 78  ---HKNIVQYLGSFS------ENGFIKIFMEQVPGGSLSALLRSKWGPL-KDNEQTIGFY 127

Query: 144 ---ILYG 147
              IL G
Sbjct: 128 TKQILEG 134

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 86.6 bits (215), Expect = 2e-21
 Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 19/125 (15%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            F+    +G G+YGEV+  +  E G   A+K   +     ++            + E   
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRAR--------KLAEVG- 108

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
             + +  HP        +       E   L+   ELC       L Q  +  G SL E Q
Sbjct: 109 SHEKVGQHPCCVRLEQAWE------EGGILYLQTELCGP----SLQQHCEAWGASLPEAQ 158

Query: 141 IAYIL 145
           +   L
Sbjct: 159 VWGYL 163

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 86.3 bits (214), Expect = 4e-21
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 24/143 (16%)

Query: 10  INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEY 67
           I     +   N  +    +G GT G+V+  +  +TG  +A+K M      E  + I    
Sbjct: 15  IGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI---- 70

Query: 68  LVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
             L DL +      +      P I   +G ++          ++  MEL    +      
Sbjct: 71  --LMDLDV------VLKSHDCPYIVQCFGTFIT------NTDVFIAMELMGTCAEKL--- 113

Query: 128 GMKKRGVSLSEDQIAYILYGTVQ 150
             K+    + E  +  +    V+
Sbjct: 114 -KKRMQGPIPERILGKMTVAIVK 135

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 86.1 bits (213), Expect = 6e-21
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 21/135 (15%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
               + F+    +G G  G V+      +G  +A K+   I   I+      + +++L +
Sbjct: 29  ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL---IHLEIKPAIRNQI-IRELQV 84

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                 L +    P I  FYG +        + ++   ME   GGS+  ++    K+   
Sbjct: 85  ------LHE-CNSPYIVGFYGAFYS------DGEISICMEHMDGGSLDQVL----KKAGR 127

Query: 136 LSEDQIAYILYGTVQ 150
           + E  +  +    ++
Sbjct: 128 IPEQILGKVSIAVIK 142

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 80.8 bits (200), Expect = 3e-19
 Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 28/138 (20%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
              FK  ELIG G +G+V+ AK    G    IK    +  N E+ E E   L  L     
Sbjct: 10  GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKLD---- 62

Query: 79  YLVLKDLSVHPNIPSFYGLYL----------RRGGQPEEDQLWFVMELCTGGSVTDLVQG 128
                    H NI  + G +           +   + +   L+  ME C  G++   ++ 
Sbjct: 63  ---------HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE- 112

Query: 129 MKKRGVSLSEDQIAYILY 146
            K+RG  L +     +  
Sbjct: 113 -KRRGEKLDKVLALELFE 129

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 81.0 bits (200), Expect = 3e-19
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME--NIPENIEEIEEEYLVLKDLSIE 76
            + + L +++G+G    V+  +  +TGD  AIK+    +    ++    E+ VLK L+  
Sbjct: 8   NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-- 65

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      H NI   + +      +        +ME C  GS+  +++        L
Sbjct: 66  -----------HKNIVKLFAIE----EETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGL 109

Query: 137 SEDQIAYIL 145
            E +   +L
Sbjct: 110 PESEFLIVL 118

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 79.6 bits (197), Expect = 6e-19
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 14/126 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             +++   IG G+YG     +    G  +  K ++       E +          +  E 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQ---------MLVSEV 56

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +L++L  HPNI  +Y   + R        L+ VME C GG +  ++    K    L E+
Sbjct: 57  NLLRELK-HPNIVRYYDRIIDR----TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111

Query: 140 QIAYIL 145
            +  ++
Sbjct: 112 FVLRVM 117

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 80.5 bits (199), Expect = 6e-19
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            K+   + IGEG++G+    K  E G    IK +     NI  +  +           E 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-----NISRMSSKERE----ESRREV 74

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            VL ++  HPNI  +   +       E   L+ VM+ C GG +   +    ++GV   ED
Sbjct: 75  AVLANMK-HPNIVQYRESFE------ENGSLYIVMDYCEGGDLFKRIN--AQKGVLFQED 125

Query: 140 QIAYILY 146
           QI     
Sbjct: 126 QILDWFV 132

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 80.7 bits (199), Expect = 7e-19
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 20/129 (15%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIE 76
            + + L +++G+G    V+  +  +TGD  AIK+    +    ++    E+ VLK L+  
Sbjct: 8   NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-- 65

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      H NI   + +      +        +ME C  GS+  +++        L
Sbjct: 66  -----------HKNIVKLFAIE----EETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGL 109

Query: 137 SEDQIAYIL 145
            E +   +L
Sbjct: 110 PESEFLIVL 118

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 77.9 bits (192), Expect = 4e-18
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 15/134 (11%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
             + +++ ++ EG +  VY A+DV +G   A+K +  +    E+            I +E
Sbjct: 27  ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRA---------IIQE 75

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ--LWFVMELCTGGSVTDLVQGMKKRGVSL 136
              +K LS HPNI  F         + +  Q     + ELC G  V  L +   +    L
Sbjct: 76  VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK--MESRGPL 133

Query: 137 SEDQIAYILYGTVQ 150
           S D +  I Y T +
Sbjct: 134 SCDTVLKIFYQTCR 147

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 78.6 bits (193), Expect = 5e-18
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 16/127 (12%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEE 78
            ++++E +G G +G V      +TG+ VAIK    E  P+N E    E  ++K L+    
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN---- 70

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
                    HPN+ S   +          D     ME C GG +   +    +    L E
Sbjct: 71  ---------HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKE 120

Query: 139 DQIAYIL 145
             I  +L
Sbjct: 121 GPIRTLL 127

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 77.8 bits (192), Expect = 6e-18
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 13/128 (10%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
             K+  +++IG G    V       TG   A+KI   +    E +  E L     +   E
Sbjct: 93  YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKI---MEVTAERLSPEQLEEVREATRRE 149

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
             +L+ ++ HP+I +    Y           ++ V +L   G   +L   + ++  +LSE
Sbjct: 150 THILRQVAGHPHIITLIDSY------ESSSFMFLVFDLMRKG---ELFDYLTEKV-ALSE 199

Query: 139 DQIAYILY 146
            +   I+ 
Sbjct: 200 KETRSIMR 207

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 76.9 bits (190), Expect = 7e-18
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 21/141 (14%)

Query: 7   SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME--NIPENIEEIE 64
           S   N+       + F  +  +G G +G+V+  ++  +G    IK +        +E+IE
Sbjct: 9   SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIE 68

Query: 65  EEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
            E  VLK L              HPNI   + ++       +   ++ VME C GG + +
Sbjct: 69  AEIEVLKSLD-------------HPNIIKIFEVF------EDYHNMYIVMETCEGGELLE 109

Query: 125 LVQGMKKRGVSLSEDQIAYIL 145
            +   + RG +LSE  +A ++
Sbjct: 110 RIVSAQARGKALSEGYVAELM 130

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 77.8 bits (192), Expect = 8e-18
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 15/144 (10%)

Query: 3   YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE 62
           +  L+        +  R+++ + + +G G  GEV  A + +T   VAI+I   I +    
Sbjct: 118 FFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRI---ISKRKFA 174

Query: 63  IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
           I         L++E E  +LK L+ HP I      +       + +  + V+EL  GG  
Sbjct: 175 IGSAREADPALNVETEIEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGG-- 224

Query: 123 TDLVQGMKKRGVSLSEDQIAYILY 146
            +L   +      L E       Y
Sbjct: 225 -ELFDKVVGNK-RLKEATCKLYFY 246

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 75.0 bits (185), Expect = 5e-17
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 15/128 (11%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
           R+++ + + +G G  GEV  A + +T   VAIKI   I +    I         L++E E
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKI---ISKRKFAIGSAREADPALNVETE 65

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
             +LK L+ HP I      +       + +  + V+EL  GG   +L   +      L E
Sbjct: 66  IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGG---ELFDKVVGNK-RLKE 113

Query: 139 DQIAYILY 146
                  Y
Sbjct: 114 ATCKLYFY 121

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 75.5 bits (186), Expect = 5e-17
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 13/128 (10%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME--NIPENIEEIEEEYLVLKDLSIE 76
              +     +G G YGEV   K+       AIK+++     +     + + +      I 
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E  +LK L  HPNI   + ++       ++   + V E   GG   +L + +  R    
Sbjct: 95  NEISLLKSLD-HPNIIKLFDVF------EDKKYFYLVTEFYEGG---ELFEQIINRH-KF 143

Query: 137 SEDQIAYI 144
            E   A I
Sbjct: 144 DECDAANI 151

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 75.5 bits (186), Expect = 6e-17
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 27/131 (20%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME----NIPENIEEIEEEYLVLKDLS 74
            +++K Q ++G+G++GEV   KD  TG   A+K++         + E +  E  +LK L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HPNI   Y  +       ++   + V E+ TGG   +L   +  R  
Sbjct: 85  -------------HPNIMKLYEFF------EDKGYFYLVGEVYTGG---ELFDEIISRK- 121

Query: 135 SLSEDQIAYIL 145
             SE   A I+
Sbjct: 122 RFSEVDAARII 132

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 74.2 bits (183), Expect = 7e-17
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
                ++ +E++G G    V       T    A+KI++           E +     +  
Sbjct: 14  GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDV--TGGGSFSAEEVQELREATL 71

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           +E  +L+ +S HPNI      Y            + V +L   G
Sbjct: 72  KEVDILRKVSGHPNIIQLKDTY------ETNTFFFLVFDLMKKG 109

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 13  DSLRDPRN--KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           + L DPR+  ++     +G+G + + +   D +T +  A KI+         + + +   
Sbjct: 32  EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIV-----PKSLLLKPHQRE 86

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
           K   +  E  + + L+ H ++  F+G +       + D ++ V+ELC   S+ +L    K
Sbjct: 87  K---MSMEISIHRSLA-HQHVVGFHGFF------EDNDFVFVVLELCRRRSLLELH---K 133

Query: 131 KRGVSLSEDQIAYILY 146
           +R  +L+E +  Y L 
Sbjct: 134 RRK-ALTEPEARYYLR 148

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 74.4 bits (183), Expect = 1e-16
 Identities = 20/139 (14%), Positives = 53/139 (38%), Gaps = 25/139 (17%)

Query: 13  DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
             +   +  F  ++++G G  G +   + +     VA+K +  +PE     + E      
Sbjct: 17  SVVIVGKISFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFADRE------ 67

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
             ++    +L++   HPN+  ++          +    +  +ELC   ++ + V+   ++
Sbjct: 68  --VQ----LLRESDEHPNVIRYFCTEK------DRQFQYIAIELC-AATLQEYVE---QK 111

Query: 133 GVSLSEDQIAYILYGTVQV 151
             +    +   +L  T   
Sbjct: 112 DFAHLGLEPITLLQQTTSG 130

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 26/142 (18%)

Query: 7   SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME---NIPENIEEI 63
           S   N+        ++ +  ++G+G++GEV   KD  T    A+K++       ++   I
Sbjct: 9   SGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI 68

Query: 64  EEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVT 123
             E  +LK L              HPNI   + +        +    + V EL TGG   
Sbjct: 69  LREVELLKKLD-------------HPNIMKLFEIL------EDSSSFYIVGELYTGG--- 106

Query: 124 DLVQGMKKRGVSLSEDQIAYIL 145
           +L   + KR    SE   A I+
Sbjct: 107 ELFDEIIKRK-RFSEHDAARII 127

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 26/130 (20%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME---NIPENIEEIEEEYLVLKDLSI 75
              ++  + +G G YGEV   +D  T    AIKI+        +  ++ EE  VLK L  
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD- 94

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HPNI   Y  +       ++   + VME   GG   +L   +  R   
Sbjct: 95  ------------HPNIMKLYDFF------EDKRNYYLVMECYKGG---ELFDEIIHRM-K 132

Query: 136 LSEDQIAYIL 145
            +E   A I+
Sbjct: 133 FNEVDAAVII 142

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 73.0 bits (180), Expect = 2e-16
 Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 13  DSLRDPRN--KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           + L DPR+  ++     +G+G + + +   D +T +  A KI+         + + +   
Sbjct: 6   EVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIV-----PKSLLLKPHQRE 60

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
           K   +  E  + + L+ H ++  F+G +       + D ++ V+ELC   S+ +L    K
Sbjct: 61  K---MSMEISIHRSLA-HQHVVGFHGFF------EDNDFVFVVLELCRRRSLLELH---K 107

Query: 131 KRGVSLSEDQIAYILY 146
           +R  +L+E +  Y L 
Sbjct: 108 RRK-ALTEPEARYYLR 122

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 73.0 bits (180), Expect = 2e-16
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 26/138 (18%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME---NIPENIEEIEEEYLVLKDL 73
               ++ +  ++G+G++GEV   KD  T    A+K++       ++   I  E  +LK L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
                         HPNI   + +        +    + V EL TGG   +L   + KR 
Sbjct: 79  D-------------HPNIMKLFEIL------EDSSSFYIVGELYTGG---ELFDEIIKRK 116

Query: 134 VSLSEDQIAYILYGTVQV 151
              SE   A I+      
Sbjct: 117 -RFSEHDAARIIKQVFSG 133

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 73.0 bits (180), Expect = 2e-16
 Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
           ++   K+ + E +G G +G V+   +  +      K ++    +   +++E  +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR- 59

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       H NI   +  +         ++L  + E  +G    D+ + +      
Sbjct: 60  ------------HRNILHLHESF------ESMEELVMIFEFISGL---DIFERINTSAFE 98

Query: 136 LSEDQIAYIL 145
           L+E +I   +
Sbjct: 99  LNEREIVSYV 108

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 72.8 bits (179), Expect = 4e-16
 Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 23/130 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKDLSI 75
              + + + E +G G +G V+   +  TG     K +    P +   ++ E  ++  L  
Sbjct: 48  SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH- 106

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HP + + +  +       ++ ++  ++E  +GG   +L   +      
Sbjct: 107 ------------HPKLINLHDAF------EDKYEMVLILEFLSGG---ELFDRIAAEDYK 145

Query: 136 LSEDQIAYIL 145
           +SE ++   +
Sbjct: 146 MSEAEVINYM 155

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 71.8 bits (177), Expect = 5e-16
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 20/103 (19%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKDLSIEE 77
           R  F   E++G G + EV+  K   TG   A+K ++ +       +E E  VLK +    
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK--- 64

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                     H NI +   +Y            + VM+L +GG
Sbjct: 65  ----------HENIVTLEDIY------ESTTHYYLVMQLVSGG 91

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 71.9 bits (177), Expect = 6e-16
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 25/136 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-----------NIPENIEEIEEEYL 68
           N++ L++ IG+G+YG V  A +     + A+K++              P           
Sbjct: 13  NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72

Query: 69  VLKDLS----IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
            ++       + +E  +LK L  HPN+     +       P ED L+ V EL   G V +
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVL----DDPNEDHLYMVFELVNQGPVME 127

Query: 125 LVQGMKKRGVSLSEDQ 140
           +     K    LSEDQ
Sbjct: 128 VPT--LKP---LSEDQ 138

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 71.5 bits (176), Expect = 7e-16
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 30/136 (22%)

Query: 14  SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP----ENIEEIEEEYLV 69
           +  D    + L+  IG G++GEV  A    T    A K    IP    E+++  ++E  +
Sbjct: 3   TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEI 59

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
           +K L              HPNI   Y  +       +   ++ VMELCTGG   +L + +
Sbjct: 60  MKSLD-------------HPNIIRLYETF------EDNTDIYLVMELCTGG---ELFERV 97

Query: 130 KKRGVSLSEDQIAYIL 145
             +     E   A I+
Sbjct: 98  VHKR-VFRESDAARIM 112

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 71.1 bits (175), Expect = 7e-16
 Identities = 22/135 (16%), Positives = 45/135 (33%), Gaps = 27/135 (20%)

Query: 6   LSRHINIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEE 62
           +++H  ID       +      + E   GE++   W      G+ + +K++  + +    
Sbjct: 1   MNKHSGID-----FKQLNFLTKLNENHSGELWKGRWQ-----GNDIVVKVL-KVRDWSTR 49

Query: 63  IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
              ++         EE   L+  S HPN+    G        P       +      GS+
Sbjct: 50  KSRDFN--------EECPRLRIFS-HPNVLPVLGACQ----SPPAPHPTLITHWMPYGSL 96

Query: 123 TDLVQGMKKRGVSLS 137
            +++       V  S
Sbjct: 97  YNVLHEGTNFVVDQS 111

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 72.2 bits (177), Expect = 9e-16
 Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 23/131 (17%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIK-IMENIPENIEEIEEEYLVLKDLS 74
               + + + E +G G +G V+   +  TG++ A K +M     + E + +E   +  L 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HP + + +  +       +++++  + E  +GG   +L + +     
Sbjct: 213 -------------HPTLVNLHDAF------EDDNEMVMIYEFMSGG---ELFEKVADEHN 250

Query: 135 SLSEDQIAYIL 145
            +SED+    +
Sbjct: 251 KMSEDEAVEYM 261

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 70.8 bits (174), Expect = 2e-15
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 16/102 (15%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
             +++L E +G+G +  V     V  G   A  I+     +  + +          +E E
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---------KLERE 60

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
             + + L  HPNI   +          EE   + + +L TGG
Sbjct: 61  ARICRLLK-HPNIVRLHDSI------SEEGHHYLIFDLVTGG 95

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 21/102 (20%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEE 78
            + L + +GEG YGEV  A +  T + VA+KI+  +   +  E I++E  + K L+    
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---- 63

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                    H N+  FYG         E +  +  +E C+GG
Sbjct: 64  ---------HENVVKFYGHRR------EGNIQYLFLEYCSGG 90

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 69.7 bits (171), Expect = 3e-15
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 18/133 (13%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F+  + +G G +G V+ AK+     + AIK +  +P      E+         +  E 
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREK---------VMREV 54

Query: 80  LVLKDLSVHPNIPSFYGLYL------RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
             L  L  HP I  ++  +L      +      +  L+  M+LC   ++ D +   +   
Sbjct: 55  KALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN-GRCTI 112

Query: 134 VSLSEDQIAYILY 146
                    +I  
Sbjct: 113 EERERSVCLHIFL 125

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 69.5 bits (171), Expect = 3e-15
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 26/130 (20%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMEN---IPENIEEIEEEYLVLKDLSI 75
            + + ++E +G+G +  V       TG   A KI+        + +++E E  + + L  
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ- 63

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HPNI   +          EE   + V +L TGG   +L + +  R   
Sbjct: 64  ------------HPNIVRLHDSI------QEESFHYLVFDLVTGG---ELFEDIVARE-F 101

Query: 136 LSEDQIAYIL 145
            SE   ++ +
Sbjct: 102 YSEADASHCI 111

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 69.7 bits (171), Expect = 3e-15
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
             N+ + ++ IG+G +G V+  + V+    VAIK +       E    E         + 
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF----QEFQR 72

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
           E  ++ +L+ HPNI   YGL          +    VME    G +      +  +   + 
Sbjct: 73  EVFIMSNLN-HPNIVKLYGLMH--------NPPRMVMEFVPCGDLYHR---LLDKAHPIK 120

Query: 138 EDQI 141
               
Sbjct: 121 WSVK 124

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 69.9 bits (171), Expect = 4e-15
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 25/140 (17%)

Query: 9   HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM------ENIPENIEE 62
           +    SL + + K+ L+  IG+G+YG V  A + +T    AIKIM      +  P+++E 
Sbjct: 15  YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER 74

Query: 63  IEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
           I+ E  ++K L              HPNI   Y +Y       +E  +  VMELC GG +
Sbjct: 75  IKTEVRLMKKLH-------------HPNIARLYEVY------EDEQYICLVMELCHGGHL 115

Query: 123 TDLVQGMKKRGVSLSEDQIA 142
            D +              + 
Sbjct: 116 LDKLNVFIDDSTGKCAMDVV 135

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 69.7 bits (171), Expect = 5e-15
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 23/126 (18%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKDLSIEEEY 79
                E++G G +G+V+  ++  TG  +A KI++    ++ EE++ E  V+  L      
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD----- 144

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                   H N+   Y  +        ++ +  VME   GG   +L   +     +L+E 
Sbjct: 145 --------HANLIQLYDAF------ESKNDIVLVMEYVDGG---ELFDRIIDESYNLTEL 187

Query: 140 QIAYIL 145
                +
Sbjct: 188 DTILFM 193

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 69.3 bits (170), Expect = 5e-15
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 21/102 (20%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEE 78
            + L + +GEG YGEV  A +  T + VA+KI+  +   +  E I++E  + K L+    
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN---- 63

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                    H N+  FYG         E +  +  +E C+GG
Sbjct: 64  ---------HENVVKFYGHRR------EGNIQYLFLEYCSGG 90

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 67.9 bits (167), Expect = 1e-14
 Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 22/129 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             FK+  L+G+G++  VY A+ + TG  VAIK++     + + + +  +V +   ++ E 
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-----DKKAMYKAGMVQR---VQNEV 62

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ--LWFVMELCTGGSVTDLVQGMKKRGVSLS 137
            +   L  HP+I   Y  +        ED   ++ V+E+C  G +      +K R    S
Sbjct: 63  KIHCQLK-HPSILELYNYF--------EDSNYVYLVLEMCHNGEMNRY---LKNRVKPFS 110

Query: 138 EDQIAYILY 146
           E++  + ++
Sbjct: 111 ENEARHFMH 119

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 68.1 bits (167), Expect = 2e-14
 Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 25/139 (17%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME------NIPENIEEIEEEYLVLKD 72
            + ++L E+IG+G +  V    + ETG   A+KI++      +   + E+++ E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              HP+I      Y        +  L+ V E   G  +   +      
Sbjct: 83  LK-------------HPHIVELLETY------SSDGMLYMVFEFMDGADLCFEIVKRADA 123

Query: 133 GVSLSEDQIAYILYGTVQV 151
           G   SE   ++ +   ++ 
Sbjct: 124 GFVYSEAVASHYMRQILEA 142

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 16/102 (15%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
            + + ++E +G+G +  V       TG   A KI+     +  + +          +E E
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---------KLERE 78

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
             + + L  HPNI   +          EE   + V +L TGG
Sbjct: 79  ARICRKLQ-HPNIVRLHDSI------QEESFHYLVFDLVTGG 113

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 20/127 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            K++    IGEG+YG V+  ++ +TG  VAIK             E+  V+K +++ E  
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLE--------SEDDPVIKKIALREIR 54

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           + LK L  HPN+ +   ++        + +L  V E C       ++  + +    + E 
Sbjct: 55  M-LKQLK-HPNLVNLLEVF------RRKRRLHLVFEYCD----HTVLHELDRYQRGVPEH 102

Query: 140 QIAYILY 146
            +  I +
Sbjct: 103 LVKSITW 109

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 67.8 bits (166), Expect = 3e-14
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 20/123 (16%)

Query: 24  LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK 83
             +++G G  G+V    +  T +  A+K++++ P+   E+E                +  
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVE----------------LHW 109

Query: 84  DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY 143
             S  P+I     +Y           L  VME   GG +   +Q   +   + +E + + 
Sbjct: 110 RASQCPHIVRIVDVY--ENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASE 165

Query: 144 ILY 146
           I+ 
Sbjct: 166 IMK 168

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 66.9 bits (164), Expect = 3e-14
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 20/123 (16%)

Query: 24  LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK 83
             +++G G  G+V    +  T +  A+K++++ P+   E+E                +  
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVE----------------LHW 65

Query: 84  DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY 143
             S  P+I     +Y           L  VME   GG +   +Q   +   + +E + + 
Sbjct: 66  RASQCPHIVRIVDVY--ENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASE 121

Query: 144 ILY 146
           I+ 
Sbjct: 122 IMK 124

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 67.4 bits (165), Expect = 3e-14
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            +   ++IG G++G VY AK  ++G+ VAIK    + ++      E  +++ L       
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---KVLQDKRFKNRELQIMRKLD------ 105

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK---KRGVSLS 137
                  H NI      +   G + +E  L  V++         + +  +   +   +L 
Sbjct: 106 -------HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLP 154

Query: 138 EDQIAYILY 146
              +   +Y
Sbjct: 155 VIYVKLYMY 163

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 66.5 bits (163), Expect = 6e-14
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 24/128 (18%)

Query: 24  LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK 83
             + +GEG++         ++    A+KI   I + +E            + ++E   LK
Sbjct: 15  KDKPLGEGSFSICRKCVHKKSNQAFAVKI---ISKRMEA-----------NTQKEITALK 60

Query: 84  DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY 143
               HPNI   + ++       ++   + VMEL  GG   +L + +KK+    SE + +Y
Sbjct: 61  LCEGHPNIVKLHEVF------HDQLHTFLVMELLNGG---ELFERIKKKK-HFSETEASY 110

Query: 144 ILYGTVQV 151
           I+   V  
Sbjct: 111 IMRKLVSA 118

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 66.2 bits (162), Expect = 7e-14
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 23/131 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENI-PENIEEIEEEYLVLKDLSIE 76
             +     E++G+G +G+       ETG+ + +K +     E      +E  V++ L   
Sbjct: 8   RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-- 65

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      HPN+  F G+  +      + +L F+ E   GG++  +   +K      
Sbjct: 66  -----------HPNVLKFIGVLYK------DKRLNFITEYIKGGTLRGI---IKSMDSQY 105

Query: 137 SEDQIAYILYG 147
              Q       
Sbjct: 106 PWSQRVSFAKD 116

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 66.5 bits (162), Expect = 8e-14
 Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 24/133 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
               +  L+GEG + +VY A      D +      +K+ +  P N  E      +++ L 
Sbjct: 65  KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK--PANPWEFYIGTQLMERLK 122

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-G 133
                       +      FY  +L       ++    V EL + G++ + +   K    
Sbjct: 123 PS----------MQHMFMKFYSAHL------FQNGSVLVGELYSYGTLLNAINLYKNTPE 166

Query: 134 VSLSEDQIAYILY 146
             + +  +     
Sbjct: 167 KVMPQGLVISFAM 179

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 66.2 bits (162), Expect = 8e-14
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 27/134 (20%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI-EEIEEEYLVLKDLSIEE 77
            + ++++E IG G+Y          T    A+KI++    +  EEIE             
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE------------- 67

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
              +L     HPNI +   +Y       +   ++ V EL  GG   +L+  + ++    S
Sbjct: 68  ---ILLRYGQHPNIITLKDVY------DDGKYVYVVTELMKGG---ELLDKILRQK-FFS 114

Query: 138 EDQIAYILYGTVQV 151
           E + + +L+   + 
Sbjct: 115 EREASAVLFTITKT 128

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 65.8 bits (161), Expect = 1e-13
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 20/102 (19%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
            + F+++  +G G    VY  K   T    A+K++     + + +  E  VL  LS    
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKIVRTEIGVLLRLS---- 106

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                    HPNI     ++          ++  V+EL TGG
Sbjct: 107 ---------HPNIIKLKEIF------ETPTEISLVLELVTGG 133

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 20/127 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            K++   L+GEG+YG V   ++ +TG  VAIK        +E  +++  ++K +++ E  
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF------LESDDDK--MVKKIAMREIK 76

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           L LK L  H N+ +   +        ++ + + V E         ++  ++     L   
Sbjct: 77  L-LKQLR-HENLVNLLEVC------KKKKRWYLVFEFVD----HTILDDLELFPNGLDYQ 124

Query: 140 QIAYILY 146
            +   L+
Sbjct: 125 VVQKYLF 131

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 65.7 bits (159), Expect = 1e-13
 Identities = 38/165 (23%), Positives = 57/165 (34%), Gaps = 44/165 (26%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM---------ENIPENIEEIEEEYL 68
           P  K +  E IGEG +GEV+  + +     VAIKI+          +  +  EEI  E +
Sbjct: 18  PTEKLQRCEKIGEGVFGEVF--QTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75

Query: 69  VLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPE---------------------- 106
           + K    E   L  +  +          ++  +G  P                       
Sbjct: 76  ISK----ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDF 131

Query: 107 --EDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTV 149
             +DQL+ V+E   GG   DL Q   K     S      IL+   
Sbjct: 132 FKDDQLFIVLEFEFGG--IDLEQMRTKL---SSLATAKSILHQLT 171

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 65.4 bits (160), Expect = 1e-13
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 22/105 (20%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-----NIPENIEEIEEEYLVLKDLSI 75
           K+ + +L+GEG+YG+V    D ET    A+KI++      IP     +++E  +L+ L  
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
                       H N+     +        E+ +++ VME C  G
Sbjct: 65  ------------HKNVIQLVDVL----YNEEKQKMYMVMEYCVCG 93

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 20/122 (16%)

Query: 25  QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD 84
           ++++G G  G+V       TG   A+K++ + P+  +E++                    
Sbjct: 34  KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVD----------------HHWQ 77

Query: 85  LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI 144
            S  P+I     +Y        +  L  +ME   GG +   +Q  ++   + +E + A I
Sbjct: 78  ASGGPHIVCILDVY--ENMHHGKRCLLIIMECMEGGELFSRIQ--ERGDQAFTEREAAEI 133

Query: 145 LY 146
           + 
Sbjct: 134 MR 135

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 30/134 (22%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM-------ENIPENIEEIEEEYLVLK 71
            + +   E +G G +  V   ++  TG   A K +            + E+IE E  +LK
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
           ++              HPN+ + + +Y        +  +  ++EL  GG   +L   + +
Sbjct: 70  EIQ-------------HPNVITLHEVY------ENKTDVILILELVAGG---ELFDFLAE 107

Query: 132 RGVSLSEDQIAYIL 145
           +  SL+E++    L
Sbjct: 108 KE-SLTEEEATEFL 120

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 30/134 (22%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM-------ENIPENIEEIEEEYLVLK 71
            + + + E +G G +  V   ++  TG   A K +            + EEIE E  +L+
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            +              H N+ + + +Y           +  ++EL +GG   +L   + +
Sbjct: 71  QVL-------------HHNVITLHDVY------ENRTDVVLILELVSGG---ELFDFLAQ 108

Query: 132 RGVSLSEDQIAYIL 145
           +  SLSE++    +
Sbjct: 109 KE-SLSEEEATSFI 121

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 17/96 (17%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           +++GEG +  V    ++ T    A+KI+E  P +I              +  E  +L   
Sbjct: 19  DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS-----------RVFREVEMLYQC 67

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
             H N+      +       EED+ + V E   GGS
Sbjct: 68  QGHRNVLELIEFF------EEEDRFYLVFEKMRGGS 97

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 64.9 bits (158), Expect = 2e-13
 Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 16/108 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           +  KL ELIG G YG VY          VA+K+      N +    E  + +   +E   
Sbjct: 13  DNLKLLELIGRGRYGAVYKGS--LDERPVAVKVFS--FANRQNFINEKNIYRVPLME--- 65

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                   H NI  F      R       +   VME    GS+   + 
Sbjct: 66  --------HDNIARFIV-GDERVTADGRMEYLLVMEYYPNGSLXKYLS 104

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 30/134 (22%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM-------ENIPENIEEIEEEYLVLK 71
            + + + E +G G +  V   ++  TG   A K +              EEIE E  +L+
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            +              HPNI + + +Y           +  ++EL +GG   +L   + +
Sbjct: 71  QVL-------------HPNIITLHDVY------ENRTDVVLILELVSGG---ELFDFLAQ 108

Query: 132 RGVSLSEDQIAYIL 145
           +  SLSE++    +
Sbjct: 109 KE-SLSEEEATSFI 121

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 64.1 bits (157), Expect = 3e-13
 Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 30/134 (22%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM-------ENIPENIEEIEEEYLVLK 71
            + +++ E +G G +  V   +   TG   A K +            + EEIE E  +L+
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
           ++              HPNI + + ++        +  +  ++EL +GG   +L   + +
Sbjct: 64  EIR-------------HPNIITLHDIF------ENKTDVVLILELVSGG---ELFDFLAE 101

Query: 132 RGVSLSEDQIAYIL 145
           +  SL+ED+    L
Sbjct: 102 KE-SLTEDEATQFL 114

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F++   +G+G +G VY A++ ++   +A+K++        ++E+  +  +   +  E 
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL-----FKAQLEKAGVEHQ---LRREV 60

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +   L  HPNI   YG +       +  +++ ++E    G+V   +Q + K      E 
Sbjct: 61  EIQSHLR-HPNILRLYGYF------HDATRVYLILEYAPLGTVYRELQKLSK----FDEQ 109

Query: 140 QIAYILY 146
           + A  + 
Sbjct: 110 RTATYIT 116

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 64.7 bits (157), Expect = 4e-13
 Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 14/149 (9%)

Query: 15  LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVL 70
           L     K KL E +  G    V+  +DVE  +  A+K+     EN    +E + E     
Sbjct: 57  LSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAA 116

Query: 71  K--------DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
                    +       L+  D     + P F  L   +           +M       +
Sbjct: 117 ARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDD-YAVANYLLLMPAA-SVDL 174

Query: 123 TDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
             L   +    V   ++ I  +   T Q+
Sbjct: 175 ELLFSTLDFVYVFRGDEGILALHILTAQL 203

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 64.1 bits (157), Expect = 4e-13
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 37/137 (27%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPENIE--------EIEEEYLV 69
            +++  + +GEG +  VY A+D  T   VAIK   + +  E  +        EI+    +
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK----L 65

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
           L++LS             HPNI      +        +  +  V +       TDL   +
Sbjct: 66  LQELS-------------HPNIIGLLDAF------GHKSNISLVFDFME----TDLEVII 102

Query: 130 KKRGVSLSEDQIAYILY 146
           K   + L+   I   + 
Sbjct: 103 KDNSLVLTPSHIKAYML 119

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 64.4 bits (157), Expect = 4e-13
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 26/144 (18%)

Query: 7   SRHINIDSL-RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           SR  NI +  +  +N    ++++G G+ G V   +    G  VA+K M    +  +    
Sbjct: 1   SRIANIPNFEQSLKNLVVSEKILGYGSSGTVV-FQGSFQGRPVAVKRML--IDFCDIALM 57

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
           E        I+    +L +   HPN+  +Y           +  L+  +ELC   ++ DL
Sbjct: 58  E--------IK----LLTESDDHPNVIRYYCSE------TTDRFLYIALELC-NLNLQDL 98

Query: 126 VQGMKK---RGVSLSEDQIAYILY 146
           V+             E     +L 
Sbjct: 99  VESKNVSDENLKLQKEYNPISLLR 122

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 30/136 (22%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPEN-----IEEIEEEYLVLKD 72
           +K++    IG+GT+GEV+ A+  +TG  VA+K  +MEN  E      + EI     +L+ 
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI----KILQL 72

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRG--GQPEEDQLWFVMELCTGGSVTDLVQGMK 130
           L              H N+ +   +   +       +  ++ V + C      DL   + 
Sbjct: 73  LK-------------HENVVNLIEICRTKASPYNRCKGSIYLVFDFCE----HDLAGLLS 115

Query: 131 KRGVSLSEDQIAYILY 146
              V  +  +I  ++ 
Sbjct: 116 NVLVKFTLSEIKRVMQ 131

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 63.1 bits (154), Expect = 7e-13
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 24/117 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIP-ENIEEIEEEYLVLKDL 73
              +  L+E+IG G +G+VY   W      GD VA+K   + P E+I +  E        
Sbjct: 5   DFAELTLEEIIGIGGFGKVYRAFWI-----GDEVAVKAARHDPDEDISQTIENVR----- 54

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
              +E  +   L  HPNI +  G+ L+      E  L  VME   GG +  ++ G +
Sbjct: 55  ---QEAKLFAMLK-HPNIIALRGVCLK------EPNLCLVMEFARGGPLNRVLSGKR 101

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 63.3 bits (154), Expect = 1e-12
 Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 17/105 (16%)

Query: 23  KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL 82
            LQE IG+G +GEV+  K    G+ VA+KI  +  E     E E      L         
Sbjct: 45  VLQESIGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTVMLR-------- 94

Query: 83  KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                H NI  F     +  G     QLW V +    GS+ D + 
Sbjct: 95  -----HENILGFIAADNKDNGTWT--QLWLVSDYHEHGSLFDYLN 132

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 23/120 (19%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++   + IG G +G     +D  T + VA+K +E      E ++ E +  + L       
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR------ 74

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
                  HPNI  F  + L          L  +ME  +GG + + +    +     SED+
Sbjct: 75  -------HPNIVRFKEVILT------PTHLAIIMEYASGGELYERICNAGR----FSEDE 117

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 30/134 (22%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-------IEEIEEEYLVLKD 72
           ++++++ LIG G+YG V  A D      VAIK +  + E+       + EI     +L  
Sbjct: 53  DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIA----ILNR 108

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L+             H ++     + + +  +  ++ L+ V+E+      +D  +  +  
Sbjct: 109 LN-------------HDHVVKVLDIVIPKDVEKFDE-LYVVLEIAD----SDFKKLFRT- 149

Query: 133 GVSLSEDQIAYILY 146
            V L+E  I  +LY
Sbjct: 150 PVYLTELHIKTLLY 163

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 18/140 (12%)

Query: 7   SRHINIDSLRDPRNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE 65
           + ++   S+ +  N + L  + +G G +  V       TG   A K ++      +   E
Sbjct: 15  TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE 74

Query: 66  EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
                    I  E  VL+     P + + + +Y          ++  ++E   GG +  L
Sbjct: 75  ---------ILHEIAVLELAKSCPRVINLHEVY------ENTSEIILILEYAAGGEIFSL 119

Query: 126 VQGMKKRGVSLSEDQIAYIL 145
              + +    +SE+ +  ++
Sbjct: 120 C--LPELAEMVSENDVIRLI 137

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 62.8 bits (153), Expect = 1e-12
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 25/118 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           P  + ++ ELIG+G +G+VY   W  +      VAI+++ +I  + E+  + +       
Sbjct: 31  PFEQLEIGELIGKGRFGQVYHGRWHGE------VAIRLI-DIERDNEDQLKAFK------ 77

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
              E +  +    H N+  F G  +          L  +  LC G ++  +V+  K  
Sbjct: 78  --REVMAYRQTR-HENVVLFMGACMS------PPHLAIITSLCKGRTLYSVVRDAKIV 126

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 62.4 bits (152), Expect = 2e-12
 Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 17/105 (16%)

Query: 23  KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL 82
            L E +G+G YGEV+       G++VA+KI  +  E     E E      L         
Sbjct: 11  TLLECVGKGRYGEVWRGS--WQGENVAVKIFSSRDEKSWFRETELYNTVMLR-------- 60

Query: 83  KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                H NI  F    +         QLW +      GS+ D +Q
Sbjct: 61  -----HENILGFIASDMTSRHSST--QLWLITHYHEMGSLYDYLQ 98

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 23/132 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK-IMENIPENIEEIEEEYLVLKDLSIEEE 78
           ++F+++ + G+GT+G V   K+  TG  VAIK ++++      E++     ++DL++   
Sbjct: 23  DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI----MQDLAVLH- 77

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ-LWFVMELCTGGSVTDLVQGMK---KRGV 134
                    HPNI      +   G +   D  L  VME         L +  +   +R V
Sbjct: 78  ---------HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP----DTLHRCCRNYYRRQV 124

Query: 135 SLSEDQIAYILY 146
           +     I   L+
Sbjct: 125 APPPILIKVFLF 136

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 62.1 bits (151), Expect = 2e-12
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 17/112 (15%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
           R    + ++ + IG+G YGEV+  K    G+ VA+K+     E     E E      +  
Sbjct: 33  RTIAKQIQMVKQIGKGRYGEVWMGK--WRGEKVAVKVFFTTEEASWFRETEIYQTVLMR- 89

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                       H NI  F    ++  G     QL+ + +    GS+ D ++
Sbjct: 90  ------------HENILGFIAADIK--GTGSWTQLYLITDYHENGSLYDYLK 127

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 62.0 bits (150), Expect = 3e-12
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 20/160 (12%)

Query: 8   RHINIDSLRDPRNK-FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEE 62
           +   ++S    R +      ++G+        A D ETG+   + +           I++
Sbjct: 65  QPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ 124

Query: 63  IEEEYLVLKDLS---------IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFV 113
           ++EE L L+ L          +   ++   DL   P       + L           +F+
Sbjct: 125 MKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL-DERDMWVLSRFFL 183

Query: 114 MEL--CTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
                    +  +++        SL       +   T+QV
Sbjct: 184 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQL---TLQV 220

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 24/115 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
              + +++E++G G +G V  AK       VAIK +E+     +    E   L  ++   
Sbjct: 6   DYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIES-ESERKAFIVELRQLSRVN--- 59

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
                     HPNI   YG  L        + +  VME   GGS+ +++ G +  
Sbjct: 60  ----------HPNIVKLYGACL--------NPVCLVMEYAEGGSLYNVLHGAEPL 96

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 61.1 bits (149), Expect = 4e-12
 Identities = 22/121 (18%), Positives = 52/121 (42%), Gaps = 19/121 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           + F +   +G+G +G VY A++ +    +A+K++        ++E+E +  +   +  E 
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVL-----FKSQLEKEGVEHQ---LRREI 65

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +   L  HPNI   Y  +       +  +++ ++E    G +   +Q   +      E 
Sbjct: 66  EIQSHLR-HPNILRMYNYF------HDRKRIYLMLEFAPRGELYKELQKHGR----FDEQ 114

Query: 140 Q 140
           +
Sbjct: 115 R 115

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 61.3 bits (149), Expect = 4e-12
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 17/122 (13%)

Query: 7   SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEE 66
              +  ++L       +L E+   G +G V+ A      ++VA+KI     +   + E E
Sbjct: 11  GVDLGTENLYFQSMPLQLLEVKARGRFGCVWKA--QLLNEYVAVKIFPIQDKQSWQNEYE 68

Query: 67  YLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
              L  +              H NI  F G   +RG    +  LW +      GS++D +
Sbjct: 69  VYSLPGMK-------------HENILQFIG-AEKRGTSV-DVDLWLITAFHEKGSLSDFL 113

Query: 127 QG 128
           + 
Sbjct: 114 KA 115

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 61.2 bits (149), Expect = 5e-12
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 13/107 (12%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           P  +F L  ++G+G +G V      ++  +   VA+K+++   + I   + E  +     
Sbjct: 21  PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK--ADIIASSDIEEFL----- 73

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
              E   +K+   HP++    G+ LR   +        ++     G 
Sbjct: 74  --REAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            + L + +G GT+G+V   +   TG  VA+KI+     N ++I    +V K   I+ E  
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL-----NRQKIRSLDVVGK---IKREIQ 63

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
            LK    HP+I   Y +             + VME  +GG
Sbjct: 64  NLKLFR-HPHIIKLYQVI------STPTDFFMVMEYVSGG 96

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P     ++E IG G++G V+ A+    G  VA+KI+    +   E   E+L         
Sbjct: 35  PWCDLNIKEKIGAGSFGTVHRAE--WHGSDVAVKIL-MEQDFHAERVNEFL--------R 83

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
           E  ++K L  HPNI  F G   +         L  V E  + GS+  L+         L 
Sbjct: 84  EVAIMKRLR-HPNIVLFMGAVTQ------PPNLSIVTEYLSRGSLYRLLHK-SGAREQLD 135

Query: 138 EDQIAYI 144
           E +   +
Sbjct: 136 ERRRLSM 142

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 22/120 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIM-ENIPENIEEIEEEYLVLKD 72
                K  + +G+G +G V   +       TG+ VA+K +  +  E++ + E E  +LK 
Sbjct: 8   EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 67

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              H NI  + G+    G +     L  +ME    GS+ D +Q  K+R
Sbjct: 68  LQ-------------HDNIVKYKGVCYSAGRRN----LKLIMEYLPYGSLRDYLQKHKER 110

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 60.2 bits (147), Expect = 7e-12
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 34/134 (25%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPE-----NIEEIEEEYLVLKD 72
            K++  E IGEGTYG V+ AK+ ET + VA+K   +++  E      + EI     +LK+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC----LLKE 57

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              H NI   + +         + +L  V E C      DL +     
Sbjct: 58  LK-------------HKNIVRLHDVL------HSDKKLTLVFEFCD----QDLKKYFDSC 94

Query: 133 GVSLSEDQIAYILY 146
              L  + +   L+
Sbjct: 95  NGDLDPEIVKSFLF 108

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 60.8 bits (148), Expect = 8e-12
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 24/130 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             +   ++IG G++G V+ AK VE+   VAIK +          ++ +   ++L I    
Sbjct: 40  IAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKV--------LQDKRF-KNRELQI---- 85

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK---KRGVSL 136
             ++ +  HPN+      +   G + +E  L  V+E         + +  +   K   ++
Sbjct: 86  --MRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTM 138

Query: 137 SEDQIAYILY 146
               I   +Y
Sbjct: 139 PMLLIKLYMY 148

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 60.7 bits (148), Expect = 8e-12
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 24/132 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSI 75
                 L E IG G +GEV+  +       VA+K       P+   +  +E  +LK  S 
Sbjct: 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS- 170

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HPNI    G+  +   QP    ++ VMEL  GG     +  ++  G  
Sbjct: 171 ------------HPNIVRLIGVCTQ--KQP----IYIVMELVQGGD---FLTFLRTEGAR 209

Query: 136 LSEDQIAYILYG 147
           L    +  ++  
Sbjct: 210 LRVKTLLQMVGD 221

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 60.5 bits (147), Expect = 8e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 22/120 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIM-ENIPENIEEIEEEYLVLKD 72
                K  + +G+G +G V   +       TG+ VA+K +  +  E++ + E E  +LK 
Sbjct: 39  EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 98

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              H NI  + G+    G +     L  +ME    GS+ D +Q  K+R
Sbjct: 99  LQ-------------HDNIVKYKGVCYSAGRRN----LKLIMEYLPYGSLRDYLQKHKER 141

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             + + + IG G   +V+   + E     AIK +     N+EE + + L     S   E 
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYV-----NLEEADNQTLD----SYRNEI 58

Query: 80  LVLKDLSVHPN--IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
             L  L    +  I   Y   +       +  ++ VME C    +      +KK+  S+ 
Sbjct: 59  AYLNKLQ-QHSDKIIRLYDYEI------TDQYIYMVME-CGNIDLNSW---LKKKK-SID 106

Query: 138 EDQIAYILY 146
             +      
Sbjct: 107 PWERKSYWK 115

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 60.2 bits (146), Expect = 1e-11
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 15/100 (15%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            + L + +G GT+G+V   K   TG  VA+KI+     N ++I    +V K   I  E  
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKIL-----NRQKIRSLDVVGK---IRREIQ 68

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
            LK    HP+I   Y +            ++ VME  +GG
Sbjct: 69  NLKLFR-HPHIIKLYQVI------STPSDIFMVMEYVSGG 101

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 18/132 (13%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPENIEEIEEEYLVLKDLSIEE 77
           ++++    IG G YG VY A+D  +G  VA+K   + N                 +S   
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN--------GGGGGGGLPISTVR 60

Query: 78  EYLVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-GV 134
           E  +L+ L    HPN+     +         E ++  V E        DL   + K    
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDV-CATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPP 115

Query: 135 SLSEDQIAYILY 146
            L  + I  ++ 
Sbjct: 116 GLPAETIKDLMR 127

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             + + + IG G   +V+   + E     AIK +     N+EE + + L     S   E 
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYV-----NLEEADNQTLD----SYRNEI 77

Query: 80  LVLKDLSVHPN--IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
             L  L    +  I   Y   +       +  ++ VME C    +      +KK+  S+ 
Sbjct: 78  AYLNKLQ-QHSDKIIRLYDYEI------TDQYIYMVME-CGNIDLNSW---LKKKK-SID 125

Query: 138 EDQIAYILY 146
             +      
Sbjct: 126 PWERKSYWK 134

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F++ + IG G +GE+   K++ T ++VAIK        +E ++     L       EY
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIK--------LEPMKSRAPQLHL-----EY 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
              K L     IP  Y       G         V+EL  G S+ DL     + 
Sbjct: 56  RFYKQLGSGDGIPQVYYF-----GP-CGKYNAMVLELL-GPSLEDLFDLCDRT 101

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 59.3 bits (143), Expect = 3e-11
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 20/113 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           NKF+L   IG G++GE+Y   +++T + VAIK        +E ++ ++  L       E 
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--------LENVKTKHPQLLY-----ES 53

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
            + + L     IP+         G  E D    VM+L  G S+ DL     ++
Sbjct: 54  KIYRILQGGTGIPNVRWF-----GV-EGDYNVLVMDLL-GPSLEDLFNFCSRK 99

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 33/133 (24%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMEN---IPEN-IEEIEEEYLVLKDL 73
             +   + +GEGTY  VY  K   T + VA+K   +E+    P   I E+          
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREV---------- 51

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
           S+      LKDL  H NI + + +         E  L  V E        DL Q +   G
Sbjct: 52  SL------LKDLK-HANIVTLHDII------HTEKSLTLVFEYLD----KDLKQYLDDCG 94

Query: 134 VSLSEDQIAYILY 146
             ++   +   L+
Sbjct: 95  NIINMHNVKLFLF 107

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 22/120 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIM-ENIPENIEEIEEEYLVLKD 72
                K    +G+G +G V   +       TG  VA+K +  + P+   + + E  +LK 
Sbjct: 21  EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKA 80

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L                 I  + G+    G Q     L  VME    G + D +Q  + R
Sbjct: 81  LH-------------SDFIVKYRGVSYGPGRQS----LRLVMEYLPSGCLRDFLQRHRAR 123

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 23/127 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P  +  + + IG G++G VY  K       VA+K++ N+     +  + +          
Sbjct: 22  PDGQITVGQRIGSGSFGTVYKGK---WHGDVAVKML-NVTAPTPQQLQAFK--------N 69

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
           E  VL+    H NI  F G            QL  V + C G S+   +           
Sbjct: 70  EVGVLRKTR-HVNILLFMGYST-------APQLAIVTQWCEGSSLYHHLH---ASETKFE 118

Query: 138 EDQIAYI 144
             ++  I
Sbjct: 119 MKKLIDI 125

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 31/136 (22%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVE-TGDHVAIKIM--ENIPENIEEIEEEYLVLK 71
            +   K    +GEG +G+V    +    + TG+ VA+K +  +  P++    ++E  +L+
Sbjct: 29  HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILR 88

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            L              H +I  + G     G       L  VME    GS   L   + +
Sbjct: 89  TLY-------------HEHIIKYKGCCEDAGAAS----LQLVMEYVPLGS---LRDYLPR 128

Query: 132 RGVSLSE-----DQIA 142
             + L++      QI 
Sbjct: 129 HSIGLAQLLLFAQQIC 144

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 58.6 bits (142), Expect = 5e-11
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIP---------------ENIEEIE 64
            K+ L + +G G++G V    D+E+G   A+K +   P                NI ++ 
Sbjct: 7   KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLV 66

Query: 65  E-EYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVT 123
           +  Y    +     +     +     N               +   L  +ME        
Sbjct: 67  DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP----D 122

Query: 124 DLVQGMK---KRGVSLSEDQIAYILY 146
            L + +K   + G S+  + I+  +Y
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIY 148

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 58.3 bits (141), Expect = 5e-11
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             + + + IG G   +V+   + E     AIK +     N+EE + + L     S   E 
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYV-----NLEEADNQTLD----SYRNEI 105

Query: 80  LVLKDLSVHPN--IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
             L  L    +  I   Y   +       +  ++ VME C    +      +KK+  S+ 
Sbjct: 106 AYLNKLQ-QHSDKIIRLYDYEI------TDQYIYMVME-CGNIDLNSW---LKKKK-SID 153

Query: 138 EDQIAYILY 146
             +      
Sbjct: 154 PWERKSYWK 162

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 58.1 bits (141), Expect = 5e-11
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 12/101 (11%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           ++++  L+G G +G VY    V     VAIK +       + I +   +     +  E +
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV-----EKDRISDWGELPNGTRVPMEVV 98

Query: 81  VLKDLS-VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           +LK +S     +      + R       D    ++E     
Sbjct: 99  LLKKVSSGFSGVIRLLDWFER------PDSFVLILERPEPV 133

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 58.2 bits (141), Expect = 5e-11
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 20/113 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N+++L   IG G++G++Y   D+  G+ VAIK        +E ++ ++  L       E 
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--------LECVKTKHPQLHI-----ES 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
            + K +     IP+         G  E D    VMEL  G S+ DL     ++
Sbjct: 56  KIYKMMQGGVGIPTIRWC-----GA-EGDYNVMVMELL-GPSLEDLFNFCSRK 101

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 58.1 bits (141), Expect = 5e-11
 Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           +++L  L+G+G +G V+    +     VAIK++         +     +   ++   E  
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVI-----PRNRVLGWSPLSDSVTCPLEVA 86

Query: 81  VLKDLSV---HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           +L  +     HP +      +        ++    V+E     
Sbjct: 87  LLWKVGAGGGHPGVIRLLDWFET------QEGFMLVLERPLPA 123

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 22/107 (20%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMEN---IPENIEEIEEEYLVLKDLSIEE 77
            ++L + IG+G + +V  A+ + TG  VAIKI++     P +++++  E  ++K L+   
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--- 72

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
                     HPNI   + +         E  L+ +ME  +GG V D
Sbjct: 73  ----------HPNIVKLFEVI------ETEKTLYLIMEYASGGEVFD 103

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 57.7 bits (140), Expect = 6e-11
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVE-TGDHVAIKIM--ENIPENIEEIEEEYLVLK 71
            +   K    +GEG +G+V    +  + + TG+ VA+K +  E+   +I ++++E  +L+
Sbjct: 19  EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILR 78

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
           +L              H NI  + G+    GG      +  +ME    GS   L + + K
Sbjct: 79  NLY-------------HENIVKYKGICTEDGGNG----IKLIMEFLPSGS---LKEYLPK 118

Query: 132 RGVSLSEDQIAYILYG 147
               ++  Q       
Sbjct: 119 NKNKINLKQQLKYAVQ 134

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.1 bits (140), Expect = 7e-11
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 20/160 (12%)

Query: 8   RHINIDSLRDPRNK-FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEE 62
           +   ++S    R +      ++G+        A D ETG+   + +           I++
Sbjct: 60  QPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ 119

Query: 63  IEEEYLVLKDLS---------IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFV 113
           ++EE L L+ L          +   ++   DL   P       + L           +F+
Sbjct: 120 MKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL-DERDMWVLSRFFL 178

Query: 114 MELCTG--GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV 151
                    +  +++        SL       +   T+QV
Sbjct: 179 YPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQL---TLQV 215

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 57.7 bits (140), Expect = 7e-11
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 14/107 (13%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            RN   L +++GEG +G V      ++  T   VA+K M+    +  EIEE         
Sbjct: 32  DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEE--------- 82

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
              E   +KD S HPN+    G+ +    Q    +   ++     G 
Sbjct: 83  FLSEAACMKDFS-HPNVIRLLGVCIEMSSQGIP-KPMVILPFMKYGD 127

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 57.2 bits (139), Expect = 9e-11
 Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 35/135 (25%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPE-----NIEEIEEEYLVLKD 72
             F+  E IGEGTYG VY A++  TG+ VA+K   ++   E      I EI     +LK+
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREIS----LLKE 58

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L+             HPNI     +         E++L+ V E        DL + M   
Sbjct: 59  LN-------------HPNIVKLLDVI------HTENKLYLVFEFLH----QDLKKFMDAS 95

Query: 133 GVS-LSEDQIAYILY 146
            ++ +    I   L+
Sbjct: 96  ALTGIPLPLIKSYLF 110

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE---IEEEYLVLKDLSIE 76
           + + ++ LIG G+YG VY A D  T  +VAIK +  + E++ +   I  E  +L  L   
Sbjct: 26  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK-- 83

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                         I   Y L +       ++ L+ V+E+      +DL +  K   + L
Sbjct: 84  -----------SDYIIRLYDLIIPDDLLKFDE-LYIVLEIAD----SDLKKLFKT-PIFL 126

Query: 137 SEDQIAYILY 146
           +E+ I  ILY
Sbjct: 127 TEEHIKTILY 136

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 14/102 (13%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS--IEEE 78
           K+     +G G +G V+ A D E    V +K +       E++ E+  +       +  E
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFI-----KKEKVLEDCWIEDPKLGKVTLE 79

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
             +L  +  H NI     ++        +     VME    G
Sbjct: 80  IAILSRVE-HANIIKVLDIF------ENQGFFQLVMEKHGSG 114

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 35/134 (26%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE-------EIEEEYLVLKDL 73
           K++L + +G+G YG V+ + D  TG+ VA+K + +  +N         EI          
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI---------- 59

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ-LWFVMELCTGGSVTDLVQGMKKR 132
                 ++L +LS H NI +   +      + + D+ ++ V +       TDL   +  R
Sbjct: 60  ------MILTELSGHENIVNLLNVL-----RADNDRDVYLVFDYME----TDLHAVI--R 102

Query: 133 GVSLSEDQIAYILY 146
              L      Y++Y
Sbjct: 103 ANILEPVHKQYVVY 116

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 34/134 (25%), Positives = 47/134 (35%), Gaps = 35/134 (26%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPE-----NIEEIEEEYLVLKD 72
            K+   E IGEGTYG VY A++   G+  A+K   +E   E      I EI     +LK+
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREIS----ILKE 56

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              H NI   Y +         + +L  V E        DL + +   
Sbjct: 57  LK-------------HSNIVKLYDVI------HTKKRLVLVFEHLD----QDLKKLLDVC 93

Query: 133 GVSLSEDQIAYILY 146
              L        L 
Sbjct: 94  EGGLESVTAKSFLL 107

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 38/138 (27%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMEN---IPEN-IEEIEEEYLVLKDL 73
           ++FK  E +G GTY  VY   +  TG +VA+K   +++    P   I EI     ++K+L
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREIS----LMKEL 60

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
                         H NI   Y +         E++L  V E        DL + M  R 
Sbjct: 61  K-------------HENIVRLYDVI------HTENKLTLVFEFMD----NDLKKYMDSRT 97

Query: 134 VS-----LSEDQIAYILY 146
           V      L  + + Y  +
Sbjct: 98  VGNTPRGLELNLVKYFQW 115

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 56.0 bits (136), Expect = 3e-10
 Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 35/134 (26%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPE-----NIEEIEEEYLVLKD 72
            K++  E +GEGTYG VY AKD   G  VA+K   ++   E      I EI     +LK+
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREIS----LLKE 75

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              HPNI S   +         E  L  V E        DL + + + 
Sbjct: 76  LH-------------HPNIVSLIDVI------HSERCLTLVFEFME----KDLKKVLDEN 112

Query: 133 GVSLSEDQIAYILY 146
              L + QI   LY
Sbjct: 113 KTGLQDSQIKIYLY 126

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 35/134 (26%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIK--IMENIPE-----NIEEIEEEYLVLKD 72
           ++++    +GEGTYGEVY A D  T + VAIK   +E+  E      I E+     +LK+
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS----LLKE 89

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           L              H NI     +           +L  + E        DL + M K 
Sbjct: 90  LQ-------------HRNIIELKSVI------HHNHRLHLIFEYAE----NDLKKYMDKN 126

Query: 133 GVSLSEDQIAYILY 146
              +S   I   LY
Sbjct: 127 P-DVSMRVIKSFLY 139

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 55.9 bits (135), Expect = 3e-10
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEE 77
           N +++   + +G + ++   +  +     A+K      + +  +  +     +   S  +
Sbjct: 31  NDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88

Query: 78  ----EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM---- 129
               E  ++ D+  +    +  G+          D+++ + E     S+    +      
Sbjct: 89  DFKNELQIITDIK-NEYCLTCEGII------TNYDEVYIIYEYMENDSILKFDEYFFVLD 141

Query: 130 KKRGVSLSEDQIAYI 144
           K     +    I  I
Sbjct: 142 KNYTCFIPIQVIKCI 156

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 55.4 bits (134), Expect = 4e-10
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 17/127 (13%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             +     +G G YG V  A D  +G+ VAIK +    ++    +  Y          E 
Sbjct: 24  KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY---------REL 74

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           L+LK +  H N+     ++            + VM        TDL + M  +    SE+
Sbjct: 75  LLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGLK---FSEE 126

Query: 140 QIAYILY 146
           +I Y++Y
Sbjct: 127 KIQYLVY 133

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 55.5 bits (134), Expect = 5e-10
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 19/121 (15%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
            R    ++  +G G YGEVY     +    VA+K ++     +EE  +E  V+K++    
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK--- 274

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPN+    G+         E   + + E  T G++ D ++   ++ VS  
Sbjct: 275 ----------HPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYLRECNRQEVSAV 318

Query: 138 E 138
            
Sbjct: 319 V 319

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 55.4 bits (134), Expect = 5e-10
 Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            + ++E +GEG++G+V  A   +T   VA+K +     + + +++  + ++   +E E  
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFI-----SRQLLKKSDMHMR---VEREIS 61

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTG 119
            LK L  HP+I   Y +            +  V+E   G
Sbjct: 62  YLKLLR-HPHIIKLYDVI------TTPTDIVMVIEYAGG 93

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 55.3 bits (134), Expect = 6e-10
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 25/134 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDL 73
              +FK  +++G G +G VY   W  + E     VAIK +        +  +E L     
Sbjct: 13  KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL----- 65

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
              +E  V+  +  +P++    G+ L          +  + +L   G    L+  +++  
Sbjct: 66  ---DEAYVMASVD-NPHVCRLLGICL-------TSTVQLITQLMPFGC---LLDYVREHK 111

Query: 134 VSLSEDQIAYILYG 147
            ++    +      
Sbjct: 112 DNIGSQYLLNWCVQ 125

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 20/109 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           PR++ KL + +G G +G+V  A         T   VA+K++    E     E   L+   
Sbjct: 25  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALM--- 78

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  +L  +  H N+ +  G   + GG      L  ++E C  G+
Sbjct: 79  ----SELKILIHIGHHLNVVNLLGACTKPGG-----PLMVIVEFCKFGN 118

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 54.7 bits (132), Expect = 8e-10
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 20/113 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             +K+   IGEG++G ++   ++     VAIK         E    +   L+D     EY
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK--------FEPRRSDAPQLRD-----EY 56

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
              K L+    IP+ Y       GQ E      V++L  G S+ DL+    ++
Sbjct: 57  RTYKLLAGCTGIPNVYYF-----GQ-EGLHNVLVIDLL-GPSLEDLLDLCGRK 102

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 37/155 (23%)

Query: 1   MAYRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDV-ETGDHVAIK--IMENIP 57
           M   GL R            +++    IGEG YG+V+ A+D+   G  VA+K   ++   
Sbjct: 1   MEKDGLCRADQ---------QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE 51

Query: 58  E-----NIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWF 112
           E      I E+     VL+ L   E          HPN+   + +         E +L  
Sbjct: 52  EGMPLSTIREVA----VLRHLETFE----------HPNVVRLFDV-CTVSRTDRETKLTL 96

Query: 113 VMELCTGGSVTDLVQGMKK-RGVSLSEDQIAYILY 146
           V E        DL   + K     +  + I  +++
Sbjct: 97  VFEHVD----QDLTTYLDKVPEPGVPTETIKDMMF 127

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 19/118 (16%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
                +L E +G+G++G V    W         VA+K ++    +  E  ++++      
Sbjct: 16  GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI------ 69

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
              E   +  L  H N+   YG+ L          +  V EL   GS+ D ++  +  
Sbjct: 70  --REVNAMHSLD-HRNLIRLYGVVL-------TPPMKMVTELAPLGSLLDRLRKHQGH 117

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 54.5 bits (131), Expect = 1e-09
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 17/126 (13%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           +++  + IG G  G V  A D     +VAIK +    +N    +  Y          E +
Sbjct: 63  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY---------RELV 113

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           ++K ++ H NI S   ++  +    E   ++ VMEL       +L Q ++     L  ++
Sbjct: 114 LMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMD----ANLCQVIQME---LDHER 165

Query: 141 IAYILY 146
           ++Y+LY
Sbjct: 166 MSYLLY 171

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 25/127 (19%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           + ++L   +G G Y EV+ A ++   + V +KI++  P   ++I+ E      + I    
Sbjct: 36  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKKKIKRE------IKI---- 83

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
             L++L   PNI +   +       P       V E       TD  Q  +     L++ 
Sbjct: 84  --LENLRGGPNIITLADIVK----DPVSRTPALVFEHVNN---TDFKQLYQT----LTDY 130

Query: 140 QIAYILY 146
            I + +Y
Sbjct: 131 DIRFYMY 137

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 54.1 bits (130), Expect = 2e-09
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   +L+  +G+G +GEV+      T   VAIK ++    + E   +E  V+K L    
Sbjct: 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLR--- 320

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   Y +         E+ ++ V E  + GS+ D ++   + G  L 
Sbjct: 321 ----------HEKLVQLYAVVS-------EEPIYIVTEYMSKGSLLDFLK--GETGKYLR 361

Query: 138 EDQIAYILYG 147
             Q+  +   
Sbjct: 362 LPQLVDMAAQ 371

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 24/133 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R + +L   IGEG +G+V+   +         VAIK  +      + + E++L      
Sbjct: 13  QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFL------ 64

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
             +E L ++    HP+I    G+       P    +W +MELCT G   +L   ++ R  
Sbjct: 65  --QEALTMRQFD-HPHIVKLIGVITE---NP----VWIIMELCTLG---ELRSFLQVRKY 111

Query: 135 SLSEDQIAYILYG 147
           SL    +    Y 
Sbjct: 112 SLDLASLILYAYQ 124

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 28/137 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH-------VAIKIMENIPENIEEIEEEYLVL 70
                   E +G+GT+ +++     E GD+       V +K++    +      E +   
Sbjct: 6   RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL---DKAHRNYSESFF-- 60

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
                 E   ++  LS H ++   YG+ +   G         V E    GS   L   +K
Sbjct: 61  ------EAASMMSKLS-HKHLVLNYGVCVC--GDE----NILVQEFVKFGS---LDTYLK 104

Query: 131 KRGVSLSEDQIAYILYG 147
           K    ++      +   
Sbjct: 105 KNKNCINILWKLEVAKQ 121

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 23/111 (20%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIME----NIPENIEEIEEEYLVLKDLSIEE 77
           ++L    G     + + A D      VA+  ++       + ++E     L L  +    
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID--- 89

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG 128
                      P +     +               V E   GGS+ ++   
Sbjct: 90  ----------KPGVARVLDV-----VH-TRAGGLVVAEWIRGGSLQEVADT 124

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 18/106 (16%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH--VAIKIMENIPENIEEIEEEYLVLKDLSI 75
             N  K Q++IGEG +G+V  A+  + G     AIK M    E   + +           
Sbjct: 23  DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM---KEYASKDDHRDFA------ 73

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
             E  VL  L  HPNI +  G    RG       L+  +E    G+
Sbjct: 74  -GELEVLCKLGHHPNIINLLGACEHRG------YLYLAIEYAPHGN 112

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 31/139 (22%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE------------EY 67
           + + +Q  I  G+YG V    D   G  VAIK + N   +   +              E 
Sbjct: 22  SPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 68  LVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
            +L         L L+D+ VH   P+ + LYL             V EL      TDL Q
Sbjct: 81  RLLNHFH-HPNILGLRDIFVHFEEPAMHKLYL-------------VTELMR----TDLAQ 122

Query: 128 GMKKRGVSLSEDQIAYILY 146
            +  + + +S   I Y +Y
Sbjct: 123 VIHDQRIVISPQHIQYFMY 141

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 23/111 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK-------DVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           PR+K  L + +GEG +G+V  A+         +    VA+K++    ++  E +   LV 
Sbjct: 33  PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML---KDDATEKDLSDLV- 88

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                  E  ++K +  H NI +  G   +    P    L+ ++E  + G+
Sbjct: 89  ------SEMEMMKMIGKHKNIINLLGACTQ--DGP----LYVIVEYASKGN 127

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 24/133 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R    L  ++GEG +GEVY   +        +VA+K  +   +   + +E+++      
Sbjct: 10  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK--KDCTLDNKEKFM------ 61

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E +++K+L  HP+I    G+      +P     W +MEL   G    L   +++   
Sbjct: 62  --SEAVIMKNLD-HPHIVKLIGIIEE---EP----TWIIMELYPYGE---LGHYLERNKN 108

Query: 135 SLSEDQIAYILYG 147
           SL    +      
Sbjct: 109 SLKVLTLVLYSLQ 121

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 3e-09
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 20/112 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           PR++ KL + +G G +G+V  A         T   VA+K+++       E          
Sbjct: 20  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALM----- 73

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
                E  +L  +  H N+ +  G   + GG      L  ++E C  G+++ 
Sbjct: 74  ----SELKILIHIGHHLNVVNLLGACTKPGG-----PLMVIVEFCKFGNLST 116

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 31/134 (23%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
              + KL + IG+G +G+V        G+ VA+K                  +K+ +  +
Sbjct: 19  NMKELKLLQTIGKGEFGDVMLGD--YRGNKVAVK-----------------CIKNDATAQ 59

Query: 78  EYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
            +L    V+  L  H N+    G+ +      E+  L+ V E    GS+ D ++   +  
Sbjct: 60  AFLAEASVMTQLR-HSNLVQLLGVIVE-----EKGGLYIVTEYMAKGSLVDYLR--SRGR 111

Query: 134 VSLSEDQIAYILYG 147
             L  D +      
Sbjct: 112 SVLGGDCLLKFSLD 125

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
           PRN+    + +G G +G+V    A  +   D    VA+K++     +    E E L+   
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML---KPSAHLTEREALM--- 74

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  VL  L  H NI +  G      G P       + E C  G 
Sbjct: 75  ----SELKVLSYLGNHMNIVNLLGACTI--GGP----TLVITEYCCYGD 113

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 23/111 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK-------DVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           PR+K  L + +GEG +G+V  A+         +    VA+K++    ++  E +   LV 
Sbjct: 79  PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML---KDDATEKDLSDLV- 134

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                  E  ++K +  H NI +  G   +    P    L+ ++E  + G+
Sbjct: 135 ------SEMEMMKMIGKHKNIINLLGACTQ--DGP----LYVIVEYASKGN 173

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 22/133 (16%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
                   E+IG G +G VY      +     H A+K +       +  E    +     
Sbjct: 87  SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFL----- 138

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E +++KD S HPN+ S  G+ LR  G P       V+     G   DL   ++    
Sbjct: 139 --TEGIIMKDFS-HPNVLSLLGICLRSEGSP-----LVVLPYMKHG---DLRNFIRNETH 187

Query: 135 SLSEDQIAYILYG 147
           + +   +      
Sbjct: 188 NPTVKDLIGFGLQ 200

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   +L+  +G+G +GEV+      T   VAIK ++    + E   +E  V+K L    
Sbjct: 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLR--- 237

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   Y +         E+ ++ V E  + GS+ D ++   + G  L 
Sbjct: 238 ----------HEKLVQLYAVVS-------EEPIYIVTEYMSKGSLLDFLK--GETGKYLR 278

Query: 138 EDQIAYILYG 147
             Q+  +   
Sbjct: 279 LPQLVDMAAQ 288

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 22/132 (16%)

Query: 19  RNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
                  E+IG G +G VY      +     H A+K +       +  E    +      
Sbjct: 24  SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL---NRITDIGEVSQFL------ 74

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
             E +++KD S HPN+ S  G+ LR  G P       V+     G   DL   ++    +
Sbjct: 75  -TEGIIMKDFS-HPNVLSLLGICLRSEGSP-----LVVLPYMKHG---DLRNFIRNETHN 124

Query: 136 LSEDQIAYILYG 147
            +   +      
Sbjct: 125 PTVKDLIGFGLQ 136

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 22/119 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDL 73
              + +  +++G G +G V+   W  + E+    V IK++E+      +  +        
Sbjct: 11  KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVT----- 63

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
              +  L +  L  H +I    GL            L  V +    GS+ D V+  +  
Sbjct: 64  ---DHMLAIGSLD-HAHIVRLLGLCP-------GSSLQLVTQYLPLGSLLDHVRQHRGA 111

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 24/130 (18%)

Query: 23  KLQELIGEGTYGEVYWA--KDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
                +G GTYG VY A  KD +     A+K          +IE   +    +S   E  
Sbjct: 24  YEGCKVGRGTYGHVYKAKRKDGKDDKDYALK----------QIEGTGI---SMSACREIA 70

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L++L  HPN+ S   ++L       + ++W + +        DL   +K    S +  +
Sbjct: 71  LLRELK-HPNVISLQKVFLSHA----DRKVWLLFDYAE----HDLWHIIKFHRASKANKK 121

Query: 141 IAYILYGTVQ 150
              +  G V+
Sbjct: 122 PVQLPRGMVK 131

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 29/125 (23%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
              + KL + IG+G +G+V        G+ VA+K                  +K+ +  +
Sbjct: 191 NMKELKLLQTIGKGEFGDVM--LGDYRGNKVAVK-----------------CIKNDATAQ 231

Query: 78  EYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
            +L    V+  L  H N+    G+ +      E+  L+ V E    GS+ D ++   +  
Sbjct: 232 AFLAEASVMTQLR-HSNLVQLLGVIVE-----EKGGLYIVTEYMAKGSLVDYLRSRGRSV 285

Query: 134 VSLSE 138
           +    
Sbjct: 286 LGGDC 290

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R + +L   IGEG +G+V+   +         VAIK  +      + + E++L      
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKFL------ 439

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
             +E L ++    HP+I    G+         E+ +W +MELCT G   +L   ++ R  
Sbjct: 440 --QEALTMRQFD-HPHIVKLIGVIT-------ENPVWIIMELCTLG---ELRSFLQVRKF 486

Query: 135 SLSEDQIAYILYG 147
           SL    +    Y 
Sbjct: 487 SLDLASLILYAYQ 499

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 25/134 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDL 73
              +FK  +++G G +G VY   W  + E     VAIK +        +  +E L     
Sbjct: 13  KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EATSPKANKEIL----- 65

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
              +E  V+  +  +P++    G+ L          +  + +L   G    L+  +++  
Sbjct: 66  ---DEAYVMASVD-NPHVCRLLGICL-------TSTVQLITQLMPFGC---LLDYVREHK 111

Query: 134 VSLSEDQIAYILYG 147
            ++    +      
Sbjct: 112 DNIGSQYLLNWCVQ 125

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
             ++  ++++IG G  GEV         +    VAIK ++      E    ++L      
Sbjct: 47  EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK--AGYTERQRRDFL------ 98

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E  ++     HPNI    G+  R  G+        V E    GS   L   ++    
Sbjct: 99  --SEASIMGQFD-HPNIIRLEGVVTR--GRL----AMIVTEYMENGS---LDTFLRTHDG 146

Query: 135 SLSEDQIAYILYG 147
             +  Q+  +L G
Sbjct: 147 QFTIMQLVGMLRG 159

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 21/130 (16%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
            R    ++  +G G YGEVY     +    VA+K ++     +EE  +E  V+K++    
Sbjct: 11  ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK--- 67

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HPN+    G+  R    P     + + E  T G++ D ++  +     +S
Sbjct: 68  ----------HPNLVQLLGVCTR--EPP----FYIITEFMTYGNLLDYLR--ECNRQEVS 109

Query: 138 EDQIAYILYG 147
              + Y+   
Sbjct: 110 AVVLLYMATQ 119

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 52.4 bits (126), Expect = 5e-09
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 17/127 (13%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            +++  + IG G  G V  A D     +VAIK +    +N    +  Y          E 
Sbjct: 25  KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY---------REL 75

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           +++K ++ H NI     ++  +    E   ++ VMEL       +L Q ++     L  +
Sbjct: 76  VLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQME---LDHE 127

Query: 140 QIAYILY 146
           +++Y+LY
Sbjct: 128 RMSYLLY 134

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 52.3 bits (126), Expect = 5e-09
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            +++    +G G YG V  A D +TG  VA+K +    ++I   +  Y          E 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------REL 79

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK +  H N+     ++       E + ++ V  L       DL   +K +   L++D
Sbjct: 80  RLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKCQ--KLTDD 132

Query: 140 QIAYILY 146
            + +++Y
Sbjct: 133 HVQFLIY 139

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 52.4 bits (126), Expect = 6e-09
 Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
                 + +++G G +GEV         +    VAIK ++      E+   ++L      
Sbjct: 43  DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK--VGYTEKQRRDFL------ 94

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E  ++     HPNI    G+  +   +P    +  V E    GS+   ++   K   
Sbjct: 95  --GEASIMGQFD-HPNIIRLEGVVTK--SKP----VMIVTEYMENGSLDSFLR---KHDA 142

Query: 135 SLSEDQIAYILYG 147
             +  Q+  +L G
Sbjct: 143 QFTVIQLVGMLRG 155

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKD 72
            R K  +   +G+G++G VY   AK V   +    VAIK +    E     E    +   
Sbjct: 23  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV---NEAASMRERIEFL--- 76

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  V+K+ +   ++    G+  +  GQP       +MEL T G 
Sbjct: 77  ----NEASVMKEFN-CHHVVRLLGVVSQ--GQP----TLVIMELMTRGD 114

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.4 bits (126), Expect = 6e-09
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 21/121 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   KL++ +G G +GEV+ A   +    VA+K M+    ++E    E  V+K L    
Sbjct: 186 PRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQ--- 241

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   + +         ++ ++ + E    GS+ D ++  +     L 
Sbjct: 242 ----------HDKLVKLHAVVT-------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP 284

Query: 138 E 138
           +
Sbjct: 285 K 285

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 52.4 bits (126), Expect = 7e-09
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 23/111 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK-------DVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           PR++  L + +GEG +G+V  A+              VA+K++     +  E +   L+ 
Sbjct: 67  PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML---KSDATEKDLSDLI- 122

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                  E  ++K +  H NI +  G   +    P    L+ ++E  + G+
Sbjct: 123 ------SEMEMMKMIGKHKNIINLLGACTQ--DGP----LYVIVEYASKGN 161

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 52.3 bits (126), Expect = 7e-09
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH-----VAIKIMENIPENIEEIEEEYLVLKD 72
           PRN  +  + +G G +G+V  A     G       VA+K++          E+E L+   
Sbjct: 44  PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML---KSTAHADEKEALM--- 97

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  ++  L  H NI +  G      G P    +  + E C  G 
Sbjct: 98  ----SELKIMSHLGQHENIVNLLGACTH--GGP----VLVITEYCCYGD 136

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 51.9 bits (125), Expect = 9e-09
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDL 73
             +    Q++IG G +GEVY           +  VAIK ++      E+   ++L     
Sbjct: 42  HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK--AGYTEKQRVDFL----- 94

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
               E  ++   S H NI    G+  +   +P    +  + E    G    L + ++++ 
Sbjct: 95  ---GEAGIMGQFS-HHNIIRLEGVISK--YKP----MMIITEYMENG---ALDKFLREKD 141

Query: 134 VSLSEDQIAYILYG 147
              S  Q+  +L G
Sbjct: 142 GEFSVLQLVGMLRG 155

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 19/101 (18%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           FK  +++GEG++  V  A+++ T    AIKI+   +I   I+E +  Y       +  E 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI---IKENKVPY-------VTRER 81

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
            V+  L  HP     Y  +     Q ++++L+F +     G
Sbjct: 82  DVMSRLD-HPFFVKLYFTF-----Q-DDEKLYFGLSYAKNG 115

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 51.4 bits (124), Expect = 9e-09
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 29/133 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R +  L + +G G +G V    W    +    VA+K+++    + +E  +E   +  LS
Sbjct: 6   KREEITLLKELGSGQFGVVKLGKWKGQYD----VAVKMIKEGSMSEDEFFQEAQTMMKLS 61

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HP +  FYG+  +    P    ++ V E  + G    L+  ++  G 
Sbjct: 62  -------------HPKLVKFYGVCSK--EYP----IYIVTEYISNGC---LLNYLRSHGK 99

Query: 135 SLSEDQIAYILYG 147
            L   Q+  + Y 
Sbjct: 100 GLEPSQLLEMCYD 112

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 16/127 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             ++  + +G G YG V  A D  TG  VAIK +    ++    +  Y          E 
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY---------REL 75

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK +  H N+     ++       +    + VM        TDL + MK     L ED
Sbjct: 76  RLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMG----TDLGKLMKHE--KLGED 128

Query: 140 QIAYILY 146
           +I +++Y
Sbjct: 129 RIQFLVY 135

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 29/133 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
                   + +G G +G V    W    +    VAIK+++    + +E  EE  V+ +LS
Sbjct: 22  DPKDLTFLKELGTGQFGVVKYGKWRGQYD----VAIKMIKEGSMSEDEFIEEAKVMMNLS 77

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        H  +   YG+  +   +P    ++ + E    G    L+  +++   
Sbjct: 78  -------------HEKLVQLYGVCTK--QRP----IFIITEYMANGC---LLNYLREMRH 115

Query: 135 SLSEDQIAYILYG 147
                Q+  +   
Sbjct: 116 RFQTQQLLEMCKD 128

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
           PR    L   +G G +GEVY      +        VA+K +   PE   E +E   +   
Sbjct: 28  PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFL--- 81

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E L++   + H NI    G+ L+    P     + +MEL  GG 
Sbjct: 82  ----MEALIISKFN-HQNIVRCIGVSLQ--SLP----RFILMELMAGGD 119

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 21/109 (19%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
           PR   +  +++G G +G+V    A  +        VA+K++    E  +  E E L+   
Sbjct: 43  PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML---KEKADSSEREALM--- 96

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  ++  L  H NI +  G        P    ++ + E C  G 
Sbjct: 97  ----SELKMMTQLGSHENIVNLLGACTL--SGP----IYLIFEYCCYGD 135

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 23/130 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
             ++    + IG G +G V+        D VAIK +     + E+  EE  V+  LS   
Sbjct: 6   DPSELTFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS--- 61

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     HP +   YG+ L     P    +  V E    G    L   ++ +    +
Sbjct: 62  ----------HPKLVQLYGVCLE--QAP----ICLVTEFMEHGC---LSDYLRTQRGLFA 102

Query: 138 EDQIAYILYG 147
            + +  +   
Sbjct: 103 AETLLGMCLD 112

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
           PRN  +    IGEG +G V+   A  +   +    VA+K++    E      +       
Sbjct: 45  PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML---KEEASADMQADFQ--- 98

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  ++ +   +PNI    G+     G+P    +  + E    G 
Sbjct: 99  ----REAALMAEFD-NPNIVKLLGVCAV--GKP----MCLLFEYMAYGD 136

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           PR    L + +GEG +G+V  A             VA+K++    EN    E   L+   
Sbjct: 21  PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML---KENASPSELRDLL--- 74

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E+ VLK ++ HP++   YG   +    P    L  ++E    GS
Sbjct: 75  ----SEFNVLKQVN-HPHVIKLYGACSQ--DGP----LLLIVEYAKYGS 112

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N++ L + IG G +G +Y A      +  A  +++   +    +  E    + ++ ++  
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96

Query: 80  LVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
               +     +  IP FY               + VME   G  +  +
Sbjct: 97  KKWIERKQLDYLGIPLFY--GSGLTEFKGRSYRFMVMERL-GIDLQKI 141

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
           PR    L   +G G +GEVY      +        VA+K +   PE   E +E   +   
Sbjct: 69  PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL---PEVCSEQDELDFL--- 122

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E L++   + H NI    G+ L+    P     + ++EL  GG 
Sbjct: 123 ----MEALIISKFN-HQNIVRCIGVSLQ--SLP----RFILLELMAGGD 160

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 19/108 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
             R       +IG+G +G VY   +    +     AIK +       E  + E  +    
Sbjct: 18  HERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL---SRITEMQQVEAFL---- 70

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
               E L+++ L+ HPN+ +  G+ L   G P       ++     G 
Sbjct: 71  ---REGLLMRGLN-HPNVLALIGIMLPPEGLP-----HVLLPYMCHGD 109

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   KL E +G G +GEV+          VA+K ++    + +    E  ++K L    
Sbjct: 11  PRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ--- 66

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   Y +  +   +P    ++ + E    GS+ D ++     G+ L+
Sbjct: 67  ----------HQRLVRLYAVVTQ---EP----IYIITEYMENGSLVDFLK--TPSGIKLT 107

Query: 138 EDQIAYILYG 147
            +++  +   
Sbjct: 108 INKLLDMAAQ 117

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 17/112 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVE-TGDHVAIKIMENI--PENIEEIEEEYLVLKDLSIE 76
            +++++  I  G  G +Y A D    G  V +K + +    E       E   L ++   
Sbjct: 80  GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV-- 137

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG 128
                      HP+I   +  ++    +  +   + VME   G S+      
Sbjct: 138 -----------HPSIVQIFN-FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ 177

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 26/135 (19%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           +++   + +G G  G V+ A D +    VAIK +  +  + + ++             E 
Sbjct: 11  SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHAL---------REI 59

Query: 80  LVLKDLSVHPNI--------PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            +++ L  H NI        PS   L    G   E + ++ V E       TDL   +++
Sbjct: 60  KIIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME----TDLANVLEQ 114

Query: 132 RGVSLSEDQIAYILY 146
               L E+     +Y
Sbjct: 115 G--PLLEEHARLFMY 127

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 23/109 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVYW--AKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
            R    L+  +GEG +G+V+     ++        VA+K +    +      +++     
Sbjct: 13  KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQ---- 65

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  +L +L  H +I  FYG+     G P    L  V E    G 
Sbjct: 66  ----REAELLTNLQ-HEHIVKFYGVCGD--GDP----LIMVFEYMKHGD 103

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 18/127 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           + F+L+ L+GEG YG V  A    TG+ VAIK        IE  ++    L+ L    E 
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK-------KIEPFDKPLFALRTL---REI 60

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK    H NI + + +      +   + ++ + EL      TDL + +  +   LS+D
Sbjct: 61  KILKHFK-HENIITIFNIQRPDSFENFNE-VYIIQELMQ----TDLHRVISTQ--MLSDD 112

Query: 140 QIAYILY 146
            I Y +Y
Sbjct: 113 HIQYFIY 119

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 23/109 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
            R    L+  +GEG +G+V+     ++        VA+K +    E  E   +++     
Sbjct: 39  KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL---KEASESARQDFQ---- 91

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E  +L  L  H +I  F+G+     G+P    L  V E    G 
Sbjct: 92  ----REAELLTMLQ-HQHIVRFFGVCTE--GRP----LLMVFEYMRHGD 129

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 20/118 (16%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           +++ ++IG G +GEV   +   T    A+K++ +  E I+  +  +         EE  +
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAF-------FWEERDI 122

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           +   +  P +   +  +     Q ++  L+ VME   GG   DLV  M      + E 
Sbjct: 123 MAFAN-SPWVVQLFYAF-----Q-DDRYLYMVMEYMPGG---DLVNLMSNYD--VPEK 168

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 16/126 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGD--------HVAIKIMENIPENIEEIEEEYLVLK 71
            ++KL+        G +Y A    T            ++K+         E        K
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            L + +   +    +    IP+  G      G  ++   + V+    G S+   +    K
Sbjct: 102 PLQVNKWKKLYS--TPLLAIPTCMGF-----GVHQDKYRFLVLPSL-GRSLQSALDVSPK 153

Query: 132 RGVSLS 137
             +S  
Sbjct: 154 HVLSER 159

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 13  DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           +  +D R  + L   +G G +  V+ AKD+    HVA+KI+       E  E+E  +L+ 
Sbjct: 14  EPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 71

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           ++  +     +D     +I      +  +G  P    +  V E+  G ++  L++  + R
Sbjct: 72  VN--DADNTKEDSMGANHILKLLDHFNHKG--PNGVHVVMVFEVL-GENLLALIKKYEHR 126

Query: 133 GVSLS 137
           G+ L 
Sbjct: 127 GIPLI 131

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            ++     IGEG YG V  A D      VAIK        I   E +    + L    E 
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK-------KISPFEHQTYCQRTL---REI 76

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +L     H NI     +      +  +D ++ V +L      TDL + +K +   LS D
Sbjct: 77  KILLRFR-HENIIGINDIIRAPTIEQMKD-VYIVQDLME----TDLYKLLKTQ--HLSND 128

Query: 140 QIAYILY 146
            I Y LY
Sbjct: 129 HICYFLY 135

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 16/55 (29%), Positives = 33/55 (60%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            ++++ ++IG+G++G+V  A D +   HVA+K++ N      +  EE  +L+ L 
Sbjct: 97  YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 30/136 (22%)

Query: 18  PRNKFKLQEL-IGEGTYGEVY---WAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLK 71
            R+   + ++ +G G +G V    +    +  D VAIK++       + EE+  E  ++ 
Sbjct: 7   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMREAQIMH 65

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
            L              +P I    G+          + L  VME+  GG +   +     
Sbjct: 66  QLD-------------NPYIVRLIGVCQ-------AEALMLVMEMAGGGPLHKFLV---G 102

Query: 132 RGVSLSEDQIAYILYG 147
           +   +    +A +L+ 
Sbjct: 103 KREEIPVSNVAELLHQ 118

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 22/109 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVY--WAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKD 72
             +  +  E +GE  +G+VY         G+    VAIK +    +  E    E     +
Sbjct: 7   SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL---KDKAEGPLRE-----E 58

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
                E ++   L  HPN+    G+  +   QP    L  +   C+ G 
Sbjct: 59  F--RHEAMLRARLQ-HPNVVCLLGVVTK--DQP----LSMIFSYCSHGD 98

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 14/55 (25%), Positives = 29/55 (52%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
          N F +   +G+GT+G V   + ++   + A+K++ NI +     + E  +LK + 
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQ 89

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 46.9 bits (111), Expect = 6e-07
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 30/141 (21%)

Query: 13  DSLRDPRNKFKLQEL-IGEGTYGEVY---WAKDVETGDHVAIKIM--ENIPENIEEIEEE 66
             L   R+   + ++ +G G +G V    +    +  D VAIK++       + EE+  E
Sbjct: 328 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID-VAIKVLKQGTEKADTEEMMRE 386

Query: 67  YLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
             ++  L              +P I    G+          + L  VME+  GG    L 
Sbjct: 387 AQIMHQLD-------------NPYIVRLIGVCQA-------EALMLVMEMAGGGP---LH 423

Query: 127 QGMKKRGVSLSEDQIAYILYG 147
           + +  +   +    +A +L+ 
Sbjct: 424 KFLVGKREEIPVSNVAELLHQ 444

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 46.4 bits (110), Expect = 7e-07
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 15/93 (16%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKI--MENIPENIEEIEEEYLVLKDLSIE 76
              F+  + +G G +G V+ AK+     + AIK   + N     E++  E   L  L   
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE-- 62

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQ 109
                      HP I  ++  +L    +  +++
Sbjct: 63  -----------HPGIVRYFNAWLETPPEKWQEE 84

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 18/119 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           F++ ++IG G + EV   K  +TG   A+KIM N  + ++  E            EE  V
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM-NKWDMLKRGEVSC-------FREERDV 114

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           L +      I   +  +     Q +E+ L+ VME   GG   DL+  + K G  +  + 
Sbjct: 115 LVNGD-RRWITQLHFAF-----Q-DENYLYLVMEYYVGG---DLLTLLSKFGERIPAEM 163

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 16/55 (29%), Positives = 35/55 (63%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           +++++  LIG+G++G+V  A D    + VAIKI++N    + + + E  +L+ ++
Sbjct: 54  DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 15/113 (13%), Positives = 40/113 (35%), Gaps = 13/113 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWA-----KDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
             +K+   IG+G +G +Y A     + V +     +K+    P +   +  E    +  +
Sbjct: 35  AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVE---PSDNGPLFTELKFYQRAA 91

Query: 75  IEEEYLVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
             E+           +  +P ++        +  +   + +M+   G  +  +
Sbjct: 92  KPEQIQKWIRTRKLKYLGVPKYW--GSGLHDKNGKSYRFMIMDRF-GSDLQKI 141

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 31/114 (27%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL- 80
           ++L+ L+G G  G+VY A+D      VA+K+M                 + LS +  +  
Sbjct: 36  YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMS----------------ETLSSDPVFRT 79

Query: 81  -------VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
                      L   P++   +       G+  + QL+  M L  G  +  +++
Sbjct: 80  RMQREARTAGRLQ-EPHVVPIHDF-----GE-IDGQLYVDMRLINGVDLAAMLR 126

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 44.0 bits (104), Expect = 5e-06
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 20/120 (16%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS-IEEEYL 80
           F++ ++IG G +GEV   K        A+KI+          + E L   + +   EE  
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILN---------KWEMLKRAETACFREERD 126

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           VL +      I + +  +     Q +++ L+ VM+   GG   DL+  + K    L E+ 
Sbjct: 127 VLVNGD-SKWITTLHYAF-----Q-DDNNLYLVMDYYVGG---DLLTLLSKFEDRLPEEM 176

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.5 bits (102), Expect = 7e-06
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 30/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F    ++G+G++G+V  ++   T +  A+KI+  + + ++ +++E             E 
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-DDVE---------CTMVEK 392

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            VL      P +      F         Q  +  L+FVME   GG   DL+  +++ G  
Sbjct: 393 RVLALPGKPPFLTQLHSCF---------QTMDR-LYFVMEYVNGG---DLMYHIQQVGR- 438

Query: 136 LSEDQ 140
             E  
Sbjct: 439 FKEPH 443

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 28/121 (23%)

Query: 18  PRNKFKLQE-LIGEGTYGEVY---WAKDVETGDHVAIKIM---ENIPENIEEIEEEYLVL 70
            R    L++  +G G +G V    +         VA+KI+    N P   +E+  E  V+
Sbjct: 14  DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKT-VAVKILKNEANDPALKDELLAEANVM 72

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
           + L              +P I    G+          +    VME+   G +   +Q  +
Sbjct: 73  QQLD-------------NPYIVRMIGICE-------AESWMLVMEMAELGPLNKYLQQNR 112

Query: 131 K 131
            
Sbjct: 113 H 113

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDL 73
           ++++ + +GEG +G+V    D + G  HVA+KI++N+    E    E  VL+ L
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 11/55 (20%), Positives = 28/55 (50%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
           ++ +   +G G +  V+ + D++    VA+K++++     E   +E  +LK + 
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVR 91

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS-IEEEYL 80
           F++   +G G++G V+  +    G + A+K++       E +      LK +    +E L
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL-----KKEIVVR----LKQVEHTNDERL 58

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           +L  ++ HP I   +G +     Q +  Q++ +M+   GG
Sbjct: 59  MLSIVT-HPFIIRMWGTF-----Q-DAQQIFMIMDYIEGG 91

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 20 NKFKLQELIGEGTYGEVYWAKD-VETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
           ++++   +GEGT+G+V    D       VA+KI+ N+ +  E    E  VLK +
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKI 73

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 21/124 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           + F    ++G G +GEV+  +   TG   A K +    + +++ +     +       E 
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK--KRLKKRKGYQGAMV------EK 236

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL---VQGMKKRGVSL 136
            +L  +     I S    +     +  +  L  VM +  GG   D+   +  + +     
Sbjct: 237 KILAKVH-SRFIVSLAYAF-----E-TKTDLCLVMTIMNGG---DIRYHIYNVDEDNPGF 286

Query: 137 SEDQ 140
            E +
Sbjct: 287 QEPR 290

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 29/131 (22%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM----ENIPENIEEIEEEYLVLKDLSI 75
            ++K+ + +G G    VY A+D      VAIK +        E ++  E E      LS 
Sbjct: 11  ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS- 69

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWF-VMELCTGGSVTDLVQGMKKRGV 134
                       H NI S            EED  ++ VME   G     L + ++  G 
Sbjct: 70  ------------HQNIVSMI-------DVDEEDDCYYLVMEYIEG---PTLSEYIESHG- 106

Query: 135 SLSEDQIAYIL 145
            LS D      
Sbjct: 107 PLSVDTAINFT 117

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           F   + +G G++G V   K  E+G+H A+KI+ +  + ++  + E+          E  +
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL-DKQKVVKLKQIEH-------TLNEKRI 94

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           L+ ++  P +      +     + +   L+ VME   GG
Sbjct: 95  LQAVN-FPFLVKLEFSF-----K-DNSNLYMVMEYVAGG 126

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.0 bits (96), Expect = 5e-05
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N F +  +IG G +GEVY  +  +TG   A+K ++   + I+  + E L L     E   
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK--KRIKMKQGETLAL----NERIM 242

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
           L L      P I      +         D+L F+++L  GG
Sbjct: 243 LSLVSTGDCPFIVCMSYAF-----H-TPDKLSFILDLMNGG 277

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 30/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F L  +IG G+Y +V   +  +T    A+K++  E + ++ E+I+          ++ E 
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDID---------WVQTEK 60

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            V +  S HP +      F         Q  E +L+FV+E   GG   DL+  M+++   
Sbjct: 61  HVFEQASNHPFLVGLHSCF---------QT-ESRLFFVIEYVNGG---DLMFHMQRQRK- 106

Query: 136 LSEDQ 140
           L E+ 
Sbjct: 107 LPEEH 111

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 22/121 (18%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F+   ++G+G++G+V  A+  ETGD  A+K++  + I ++ +++E             E 
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDVE---------CTMTEK 74

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +L     HP +       L    Q  +  L+FVME   GG   DL+  ++K      E 
Sbjct: 75  RILSLARNHPFL-----TQLFCCFQTPDR-LFFVMEFVNGG---DLMFHIQKSRR-FDEA 124

Query: 140 Q 140
           +
Sbjct: 125 R 125

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 30/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F L +++G+G++G+V+ A+  +T    AIK +  + +  + +++E             E 
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD-DDVE---------CTMVEK 68

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            VL     HP +     +F         Q  ++ L+FVME   GG   DL+  ++     
Sbjct: 69  RVLSLAWEHPFLTHMFCTF---------Q-TKENLFFVMEYLNGG---DLMYHIQSCHK- 114

Query: 136 LSEDQ 140
               +
Sbjct: 115 FDLSR 119

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 30/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F    ++G+G++G+V  ++   T +  A+KI+  + + ++ +++E             E 
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-DDVE---------CTMVEK 71

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            VL      P +      F         Q   D+L+FVME   GG   DL+  +++ G  
Sbjct: 72  RVLALPGKPPFLTQLHSCF---------QT-MDRLYFVMEYVNGG---DLMYHIQQVGR- 117

Query: 136 LSEDQ 140
             E  
Sbjct: 118 FKEPH 122

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 30/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F L  +IG G+Y +V   +  +T    A++++  E + ++ E+I+          ++ E 
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDID---------WVQTEK 103

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            V +  S HP +      F         Q  E +L+FV+E   GG   DL+  M+++   
Sbjct: 104 HVFEQASNHPFLVGLHSCF---------QT-ESRLFFVIEYVNGG---DLMFHMQRQRK- 149

Query: 136 LSEDQ 140
           L E+ 
Sbjct: 150 LPEEH 154

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 23/162 (14%), Positives = 41/162 (25%), Gaps = 61/162 (37%)

Query: 12  IDSLRDPRNKFKLQELIGEGTYGEVYWAK-------------------DVETGDHVAIKI 52
           +D        +K+Q  +      +++W                      ++         
Sbjct: 168 LDVCLS----YKVQCKMD----FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 53  MENIPENIEEIEEEYLVLKDLSIEEEY----LVLKDLSVHPNIPSFYGLYLRRGGQPEED 108
             NI   I  I+ E   L+ L   + Y    LVL ++  +                    
Sbjct: 220 SSNIKLRIHSIQAE---LRRLLKSKPYENCLLVLLNVQ-NAKA----------------- 258

Query: 109 QLWFVMEL-CT------GGSVTDLVQGMKKRGVSLSEDQIAY 143
             W    L C          VTD +       +SL    +  
Sbjct: 259 --WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 31/125 (24%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEEEY 79
           F   +L+G+GT+G+V   ++  TG + A+KI+  E I    +E+              E 
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVA---------HTVTES 56

Query: 80  LVLKDLSVHPNI----PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
            VL++   HP +     +F         Q   D+L FVME   GG   +L   + +  V 
Sbjct: 57  RVLQNTR-HPFLTALKYAF---------QT-HDRLCFVMEYANGG---ELFFHLSRERV- 101

Query: 136 LSEDQ 140
            +E++
Sbjct: 102 FTEER 106

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 15/101 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N F+   ++G+G +GEV   +   TG   A K +E   + I++ + E + L       E 
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEK--KRIKKRKGEAMALN------EK 235

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
            +L+ ++    + S    Y     +  +D L  V+ L  GG
Sbjct: 236 QILEKVN-SRFVVSLAYAY-----E-TKDALCLVLTLMNGG 269

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 23/34 (67%)

Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM 53
          ++++L E++G G   EV+ A+D+     VA+K++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL 45

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 23/105 (21%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           + F++   IG+G++G+V   +  +T    A+K M    +   E  E   V K      E 
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNK--QKCVERNEVRNVFK------EL 66

Query: 80  LVLKDLSVHPNIP----SFYGLYLRRGGQPEEDQLWFVMELCTGG 120
            +++ L  HP +     SF         Q EED ++ V++L  GG
Sbjct: 67  QIMQGLE-HPFLVNLWYSF---------QDEED-MFMVVDLLLGG 100

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 33/143 (23%)

Query: 7   SRHINIDSLRDPRNK---FKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIE 61
           S+ IN+    +P  K   F   ++IG+G++G+V  A+        A+K++  + I +  +
Sbjct: 22  SQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-K 80

Query: 62  EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP----SFYGLYLRRGGQPEEDQLWFVMELC 117
           E +          I  E  VL     HP +     SF         Q   D+L+FV++  
Sbjct: 81  EEK---------HIMSERNVLLKNVKHPFLVGLHFSF---------Q-TADKLYFVLDYI 121

Query: 118 TGGSVTDLVQGMKKRGVSLSEDQ 140
            GG   +L   +++      E +
Sbjct: 122 NGG---ELFYHLQRERC-FLEPR 140

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.94
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.92
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.91
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.91
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.9
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.89
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.86
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.83
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.83
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.83
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.82
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.82
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.82
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.82
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.82
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.82
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.82
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.82
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.82
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.81
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.81
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.81
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.81
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.81
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.81
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.81
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.81
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.81
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.81
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.81
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.8
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.8
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.8
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.8
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.8
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.8
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.79
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.79
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.79
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.79
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.79
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.79
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.79
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.79
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.79
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.79
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.79
3uqc_A	286	Probable conserved transmembrane protein; structur	99.79
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.79
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.79
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.79
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.79
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.78
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.78
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.78
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.78
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.78
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.78
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.78
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.78
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.78
3bhy_A	283	Death-associated protein kinase 3; death associate	99.78
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.78
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.77
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.77
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.77
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.77
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.77
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.77
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.77
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.77
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.77
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.77
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.77
3niz_A	311	Rhodanese family protein; structural genomics, str	99.77
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.77
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.77
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.77
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.77
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.76
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.76
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.76
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.76
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.76
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.76
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.76
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.76
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.76
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.76
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.76
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.76
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.76
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.76
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.76
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.76
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.76
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.76
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.76
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.76
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.76
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.76
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.76
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.76
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.76
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.75
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.75
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.75
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.75
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.75
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.75
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.75
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.75
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.75
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.75
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.75
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.75
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.75
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.75
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.75
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.75
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.75
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.75
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.74
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.74
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.74
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.74
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.74
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.74
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.74
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.74
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.74
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.74
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.74
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.74
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.74
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.74
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.73
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.73
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.73
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.73
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.73
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.73
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.73
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.73
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.73
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.73
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.73
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.73
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.73
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.73
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.72
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.72
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.72
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.72
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.72
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.72
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.72
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.71
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.71
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.71
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.71
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.71
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.71
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.71
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.71
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.71
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.7
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.7
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.7
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.7
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.7
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.7
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.69
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.69
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.69
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.69
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.69
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.69
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.69
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.69
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.69
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.69
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.68
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.68
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.68
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.68
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.68
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.68
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.68
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.67
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.67
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.67
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.67
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.67
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.67
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.67
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.66
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.66
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.66
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.66
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.66
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.66
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.66
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.66
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.65
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.64
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.64
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.64
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.64
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.64
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.63
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.63
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.63
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.63
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.63
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.62
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.62
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.61
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.58
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.58
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.55
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.54
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.43
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.32
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.28
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.26
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.05
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.94
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.32
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.55
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.31
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.23
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.31
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.85
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.51
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.26
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.05
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.01
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.02
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	93.61
3ats_A	357	Putative uncharacterized protein; hypothetical pro	90.93
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	86.71
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	85.92

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.94  E-value=3.4e-26  Score=161.29  Aligned_cols=116  Identities=29%  Similarity=0.487  Sum_probs=93.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||++.++.+++.||+|++.+..........         +.+|+.+++.++ ||||++++++
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~---------~~~E~~il~~l~-HpnIV~~~~~   91 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREE---------SRREVAVLANMK-HPNIVQYRES   91 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHH---------HHHHHHHHHHCC-CCCCCcEEEE
Confidence            457899999999999999999999999999999999865443332221         568999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ++++.+|||||||+||+|.+++..  ..+..+++..++.++.||+.|
T Consensus        92 ~------~~~~~~yiVmEy~~gg~L~~~i~~--~~~~~~~e~~~~~~~~qi~~a  137 (350)
T 4b9d_A           92 F------EENGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLA  137 (350)
T ss_dssp             E------EETTEEEEEEECCTTCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHH
T ss_pred             E------EECCEEEEEEeCCCCCcHHHHHHH--cCCCCCCHHHHHHHHHHHHHH
Confidence            9      778899999999999999999963  233458999999999999987

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.94  E-value=3.1e-26  Score=159.19  Aligned_cols=114  Identities=23%  Similarity=0.401  Sum_probs=96.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.++.+++.||+|++.+..........        .+.+|+.+++.++ ||||++++++|
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~--------~~~~E~~il~~l~-HpnIv~l~~~~  101 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP--------YVTRERDVMSRLD-HPFFVKLYFTF  101 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHH--------HHHHHHHHHHhCC-CCCCCeEEEEE
Confidence            46799999999999999999999999999999999753211111111        1568999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ++++.+|+|||||+||+|.++++..    ..+++..++.++.||+.|
T Consensus       102 ------~~~~~~yivmEy~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~a  144 (311)
T 4aw0_A          102 ------QDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSA  144 (311)
T ss_dssp             ------ECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             ------EeCCEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                  7889999999999999999999632    259999999999999987

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=4.8e-25  Score=155.21  Aligned_cols=112  Identities=34%  Similarity=0.528  Sum_probs=96.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.+.|++.+.||+|+||.||+|.++.+|+.||+|++........+           .+.+|+.+++.++ ||||+++++
T Consensus        71 dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~-----------~~~~Ei~il~~l~-HpnIV~l~~  138 (346)
T 4fih_A           71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----------LLFNEVVIMRDYQ-HENVVEMYN  138 (346)
T ss_dssp             CGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGG-----------GGHHHHHHHHHCC-CTTBCCEEE
T ss_pred             ChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHH-----------HHHHHHHHHHhCC-CCCCCcEEE
Confidence            3457799999999999999999999999999999999753322111           1458999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +|      ++++.+|||||||+||+|.++++.   .  .+++..++.++.||+.|
T Consensus       139 ~~------~~~~~~~ivmEy~~gg~L~~~l~~---~--~l~e~~~~~~~~qi~~a  182 (346)
T 4fih_A          139 SY------LVGDELWVVMEFLEGGALTDIVTH---T--RMNEEQIAAVCLAVLQA  182 (346)
T ss_dssp             EE------EETTEEEEEECCCTTEEHHHHHHH---S--CCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEeCCCCCcHHHHHHc---C--CCCHHHHHHHHHHHHHH
Confidence            99      778899999999999999999852   2  49999999999999987

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=1.4e-24  Score=156.27  Aligned_cols=114  Identities=33%  Similarity=0.519  Sum_probs=97.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++.+.|++++.||+|+||.||+|.++.+|+.||+|.+........+.           +.+|+.+|+.++ ||||++++
T Consensus       147 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~-----------~~~Ei~il~~l~-HpnIV~l~  214 (423)
T 4fie_A          147 GDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL-----------LFNEVVIMRDYQ-HENVVEMY  214 (423)
T ss_dssp             SCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGG-----------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             CChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHH-----------HHHHHHHHHhCC-CCCCCceE
Confidence            345678999999999999999999999999999999997543322111           458999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      ++|      .+.+.+|||||||+||+|.++++.   .  .+++..++.++.||+.|+
T Consensus       215 ~~~------~~~~~~~iVmEy~~gG~L~~~i~~---~--~l~e~~~~~~~~qil~aL  260 (423)
T 4fie_A          215 NSY------LVGDELWVVMEFLEGGALTDIVTH---T--RMNEEQIAAVCLAVLQAL  260 (423)
T ss_dssp             EEE------EETTEEEEEEECCTTEEHHHHHHH---S--CCCHHHHHHHHHHHHHHH
T ss_pred             EEE------EECCEEEEEEeCCCCCcHHHHHhc---c--CCCHHHHHHHHHHHHHHH
Confidence            999      678899999999999999999842   2  499999999999999873

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=1.4e-25  Score=155.64  Aligned_cols=123  Identities=18%  Similarity=0.421  Sum_probs=94.5

Q ss_pred             cccccccCCCCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc
Q psy2812           9 HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL   85 (152)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~   85 (152)
                      +..-+......++|++++.||+|+||.||++++.   .+++.||+|.+++.........         .+.+|+.+++.+
T Consensus        13 ~~~~~~~~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~---------~~~~E~~il~~l   83 (304)
T 3ubd_A           13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV---------RTKMERDILVEV   83 (304)
T ss_dssp             EECTTCCCCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC---------------CCCCCC
T ss_pred             HHhhccccCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHH---------HHHHHHHHHHHC
Confidence            3333334445578999999999999999999874   3577899999975432221111         145799999999


Q ss_pred             CCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          86 SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        86 ~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      + ||||+++++++      ++++.+|+|||||+||+|.++++..    ..+++..++.++.||+.|
T Consensus        84 ~-HpnIv~l~~~~------~~~~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~a  138 (304)
T 3ubd_A           84 N-HPFIVKLHYAF------QTEGKLYLILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALA  138 (304)
T ss_dssp             C-CTTEECEEEEE------EETTEEEEEECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             C-CCCCCeEEEEE------EECCEEEEEEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            8 99999999999      7889999999999999999999632    259999999999999987

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=2.2e-24  Score=147.85  Aligned_cols=112  Identities=26%  Similarity=0.472  Sum_probs=89.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||+|.++.+++.||+|++.+..........        .+.+|+.+++.++ ||||+++++++ 
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~--------~~~~Ei~il~~l~-HpnIv~~~~~~-   82 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--------RIEREISYLRLLR-HPHIIKLYDVI-   82 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHH--------HHHHHHHHHHHCC-CTTBCCEEEEE-
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHH--------HHHHHHHHHHHCC-CCCCCeEEEEE-
Confidence            5899999999999999999999999999999999865433222111        1568999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ++++.+|+||||| +|+|.+++..   . ..+++..++.++.||+.|
T Consensus        83 -----~~~~~~~ivmEy~-~g~L~~~l~~---~-~~l~e~~~~~~~~qi~~a  124 (275)
T 3hyh_A           83 -----KSKDEIIMVIEYA-GNELFDYIVQ---R-DKMSEQEARRFFQQIISA  124 (275)
T ss_dssp             -----ECSSEEEEEEECC-CEEHHHHHHH---S-CSCCHHHHHHHHHHHHHH
T ss_pred             -----EECCEEEEEEeCC-CCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                 7889999999999 7899998853   2 359999999999999987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.92  E-value=2.8e-24  Score=150.85  Aligned_cols=107  Identities=32%  Similarity=0.390  Sum_probs=94.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..+.|++.+.||+|+||.||++.++.+|+.||+|.++....                ..+|+.+++.++ ||||++++++
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------------~~~E~~il~~l~-HpnIV~l~~~  118 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------------RVEELVACAGLS-SPRIVPLYGA  118 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------------CTHHHHTTTTCC-CTTBCCEEEE
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------------HHHHHHHHHhCC-CCCCCcEEEE
Confidence            45679999999999999999999999999999999975321                236899999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ++++.+|||||||+||+|.++++..    ..+++..++.++.||+.|
T Consensus       119 ~------~~~~~~~ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~a  162 (336)
T 4g3f_A          119 V------REGPWVNIFMELLEGGSLGQLIKQM----GCLPEDRALYYLGQALEG  162 (336)
T ss_dssp             E------EETTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------EECCEEEEEEeccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            9      6788999999999999999999632    259999999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.91  E-value=4.7e-24  Score=147.95  Aligned_cols=117  Identities=24%  Similarity=0.380  Sum_probs=93.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ..+++|.+.+.||+|+||.||+|.+.     .++..||+|.++...  .. ...        .+.+|+.++++++ ||||
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~-~~~--------~f~~E~~il~~l~-HpnI   77 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DN-ARK--------DFHREAELLTNLQ-HEHI   77 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HH-HHH--------HHHHHHHHHTTCC-CTTB
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hH-HHH--------HHHHHHHHHHhCC-CCCC
Confidence            45679999999999999999999865     346789999997432  11 111        1568999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh---------hCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK---------KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ..++.+|+|||||++|+|.++++...         .....+++..++.++.||++|
T Consensus        78 V~l~g~~------~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~g  140 (299)
T 4asz_A           78 VKFYGVC------VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG  140 (299)
T ss_dssp             CCEEEEE------CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHH
T ss_pred             ccEEEEE------eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence            9999999      67888999999999999999996532         123469999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.91  E-value=1.6e-23  Score=144.55  Aligned_cols=114  Identities=25%  Similarity=0.306  Sum_probs=93.4

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      |++.+.||+|+||.||+|.++.++..||+|.+............         +.+|+.+++.++ ||||+++++++.+.
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~---------~~~E~~il~~l~-HpnIV~~~~~~~~~   97 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------FKEEAEMLKGLQ-HPNIVRFYDSWEST   97 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH---------HHHHHHHHHTCC-CTTBCCEEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHH---------HHHHHHHHHhCC-CCCCCcEEEEEeec
Confidence            47888999999999999999999999999999754333222211         668999999998 99999999998432


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .  ..++.+|||||||+||+|.++++..    ..+++..++.++.||++|
T Consensus        98 ~--~~~~~~~lvmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~a  141 (290)
T 3fpq_A           98 V--KGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKG  141 (290)
T ss_dssp             E--TTEEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             c--CCCcEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            1  2356799999999999999999632    259999999999999987

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.90  E-value=3.7e-23  Score=144.00  Aligned_cols=119  Identities=20%  Similarity=0.359  Sum_probs=94.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ..+.+++++.+.||+|+||.||+|...     .+++.||+|.++......  ...+        +.+|+.++++++ |||
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~--~~~~--------f~~E~~il~~l~-HpN   90 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP--LREE--------FRHEAMLRARLQ-HPN   90 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHH--------HHHHHHHHHHCC-CTT
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChH--HHHH--------HHHHHHHHHhCC-CCC
Confidence            456778999999999999999999863     356789999986432211  1111        568999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      ..++.+++|||||++|+|.+++.....            .+..+++..+..++.||++|
T Consensus        91 IV~l~g~~------~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~g  157 (308)
T 4gt4_A           91 VVCLLGVV------TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAG  157 (308)
T ss_dssp             BCCEEEEE------CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHH
T ss_pred             CCCcceEE------EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHH
Confidence            99999999      678889999999999999999964221            12359999999999999976

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=3.2e-23  Score=144.06  Aligned_cols=116  Identities=27%  Similarity=0.346  Sum_probs=94.3

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..|..+.+++.+.+.||+|+||.||+|...   ..+|+|.++......+....         +.+|+.++++++ ||||+
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~---------f~~E~~il~~l~-HpNIV   95 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQA---------FRNEVAVLRKTR-HVNIL   95 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHH---------HHHHHHHHTTCC-CTTBC
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHH---------HHHHHHHHHhCC-CCCEe
Confidence            346778889999999999999999999753   35899998754333322221         668999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      . ++.+|||||||+||+|.+++.   ..+..+++..+..++.||++|
T Consensus        96 ~l~g~~------~-~~~~~iVmEy~~gGsL~~~l~---~~~~~l~~~~~~~i~~qia~g  144 (307)
T 3omv_A           96 LFMGYM------T-KDNLAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQG  144 (307)
T ss_dssp             CEEEEE------C-SSSCEEEEECCSSCBHHHHHH---TSCCCCCHHHHHHHHHHHHHH
T ss_pred             eEEEEE------E-CCeEEEEEEcCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHH
Confidence            999987      3 456899999999999999995   233469999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.90  E-value=8.7e-23  Score=146.57  Aligned_cols=119  Identities=24%  Similarity=0.384  Sum_probs=96.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|.++.+|+.||+|+++...........         +.+|+.+|+.++ ||||++++++
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~---------~~~Ei~il~~l~-HpnIv~l~~~  121 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKR---------TLRELKILKHFK-HDNIIAIKDI  121 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHH---------HHHHHHHHHhcC-CCCcceEeee
Confidence            456899999999999999999999999999999999754433322221         558999999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.........+.+|||||||+ |+|.+++.   . +..+++..++.++.||+.|
T Consensus       122 ~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~---~-~~~l~~~~~~~~~~qil~a  170 (398)
T 4b99_A          122 LRPTVPYGEFKSVYVVLDLME-SDLHQIIH---S-SQPLTLEHVRYFLYQLLRG  170 (398)
T ss_dssp             CCCSSCTTTCCCEEEEEECCS-EEHHHHHT---S-SSCCCHHHHHHHHHHHHHH
T ss_pred             eecccccccCCEEEEEEeCCC-CCHHHHHH---h-cCCCCHHHHHHHHHHHHHH
Confidence            843322234578999999995 68988884   2 3369999999999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.90  E-value=4.4e-23  Score=144.81  Aligned_cols=118  Identities=22%  Similarity=0.321  Sum_probs=95.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ...+++|.+.+.||+|+||.||+|..+     .++..||+|.++...   .....        .+.+|+.+++.++ |||
T Consensus        37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~--------~f~~E~~il~~l~-Hpn  104 (329)
T 4aoj_A           37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQ--------DFQREAELLTMLQ-HQH  104 (329)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---HHHHH--------HHHHHHHHHTTCC-CTT
T ss_pred             ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---HHHHH--------HHHHHHHHHHhCC-CCC
Confidence            345678999999999999999999865     357789999997432   11111        1668999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-----------CCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-----------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      ...+.+|||||||++|+|.++++....           ....+++..++.++.||++|
T Consensus       105 IV~l~g~~------~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~g  170 (329)
T 4aoj_A          105 IVRFFGVC------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG  170 (329)
T ss_dssp             BCCEEEEE------CSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEE------EECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHH
Confidence            99999999      678889999999999999999964321           12359999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=3e-23  Score=143.97  Aligned_cols=120  Identities=21%  Similarity=0.327  Sum_probs=90.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||+|.++.+++.||+|.++.....  ....        .+.+|+.+++.++ ||||+++++++.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~--------~~~~E~~il~~l~-HpnIV~~~~~~~   73 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LARE--------KVMREVKALAKLE-HPGIVRYFNAWL   73 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSH--HHHH--------HHHHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCH--HHHH--------HHHHHHHHHHhCC-CCCCCeEEEEEE
Confidence            4799999999999999999999999999999999754321  1111        1568999999998 999999999986


Q ss_pred             ecCCC------CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQ------PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+..      ....++|++||||+||+|.++++..... ...++..++.++.||++|
T Consensus        74 ~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~a  130 (299)
T 4g31_A           74 EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI-EERERSVCLHIFLQIAEA  130 (299)
T ss_dssp             EEC----------CEEEEEEEECCCSCCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHH
T ss_pred             ecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCC-ChhHHHHHHHHHHHHHHH
Confidence            53310      1234689999999999999999632211 124567789999999987

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=6e-23  Score=154.47  Aligned_cols=120  Identities=21%  Similarity=0.313  Sum_probs=95.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||.||+|.++.+|+.||+|++.+.............     ....++.++..++ ||||++++
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~-----~E~~~l~ll~~~~-HP~IV~l~  258 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIMLSLVSTGD-CPFIVCMS  258 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHH-----HHHHHHHHHSSSC-CTTBCCEE
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHH-----HHHHHHHHHhhCC-CCCEeEEE
Confidence            45678999999999999999999999999999999999753221111111100     0123456667777 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++|      ++++.+|||||||+||+|.++++..    ..+++..++.|+.||+.|
T Consensus       259 ~~f------~~~~~lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~a  304 (689)
T 3v5w_A          259 YAF------HTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILG  304 (689)
T ss_dssp             EEE------ECSSEEEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             EEE------EECCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      8899999999999999999999642    259999999999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.89  E-value=1.1e-22  Score=144.01  Aligned_cols=123  Identities=19%  Similarity=0.347  Sum_probs=96.8

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCC-----CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETG-----DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .|..++++|++.+.||+|+||.||+|.+...+     +.||+|.+...... .....         +.+|+.++..+..|
T Consensus        58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~-~~~~~---------~~~E~~il~~l~hh  127 (353)
T 4ase_A           58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRA---------LMSELKILIHIGHH  127 (353)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH-HHHHH---------HHHHHHHHHHHCCC
T ss_pred             ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh-HHHHH---------HHHHHHHHHHcCCC
Confidence            45688899999999999999999999876543     56899998753322 11111         56899999999746


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------------CCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++.     +..+.+|+|||||++|+|.++++.....            +..+++..+..++.||++|
T Consensus       128 pnIV~l~g~~~-----~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~g  197 (353)
T 4ase_A          128 LNVVNLLGACT-----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG  197 (353)
T ss_dssp             TTBCCEEEEEC-----CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEEEE-----ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHH
Confidence            99999999883     3446799999999999999999754321            2358999999999999976

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.89  E-value=1.2e-22  Score=151.80  Aligned_cols=112  Identities=20%  Similarity=0.395  Sum_probs=96.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.++.+|+.||+|.+........  .         .+.+|+.+|+.++ ||||++++++|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~--~---------~~~~Ei~il~~l~-hpnIv~l~~~~  223 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--E---------TVRKEIQTMSVLR-HPTLVNLHDAF  223 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHH--H---------HHHHHHHHHHHTC-CTTBCCEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhH--H---------HHHHHHHHHHhCC-CCCCCeEEEEE
Confidence            4689999999999999999999999999999999975432111  1         1458999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            +.++.+||+||||+||+|.+++.   .....+++..++.++.||++|
T Consensus       224 ------~~~~~~~iv~E~~~gg~L~~~i~---~~~~~l~e~~~~~~~~qi~~a  267 (573)
T 3uto_A          224 ------EDDNEMVMIYEFMSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKG  267 (573)
T ss_dssp             ------ECSSEEEEEEECCCCCBHHHHHT---CTTSCEEHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEeecCCCcHHHHHH---HhCCCCCHHHHHHHHHHHHHH
Confidence                  78899999999999999999984   223369999999999999986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.86  E-value=2.2e-21  Score=137.82  Aligned_cols=110  Identities=22%  Similarity=0.295  Sum_probs=91.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +...+.|++.+.||+|+||.||+|.++   .+++.||+|.+.+.... .   .         +.+|+.++..+.+||||+
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-~---~---------~~~E~~~l~~~~~h~nIv   83 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP-I---R---------IAAELQCLTVAGGQDNVM   83 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH-H---H---------HHHHHHHHHHTCSBTTBC
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH-H---H---------HHHHHHHHHHhcCCCCCc
Confidence            345578999999999999999999875   35678999988653211 1   1         447899999886699999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++|      +..+++|+|||||+||+|.++++       .+++..++.++.|+++|
T Consensus        84 ~l~~~~------~~~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~a  129 (361)
T 4f9c_A           84 GVKYCF------RKNDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKA  129 (361)
T ss_dssp             CCSEEE------EETTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHH
T ss_pred             eEEEEE------EECCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHH
Confidence            999999      77899999999999999999882       39999999999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=6.1e-20  Score=128.94  Aligned_cols=116  Identities=27%  Similarity=0.463  Sum_probs=97.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.++ ||||++++
T Consensus        11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpnIv~l~   80 (328)
T 3fe3_A           11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK---------LFREVRIMKILN-HPNIVKLF   80 (328)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH---------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHH---------HHHHHHHHHhCC-CCCEeeEE
Confidence            34456899999999999999999999999999999999764333222221         557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+.+|+||||+++|+|.+++...    ..+++..++.++.|+++|
T Consensus        81 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~a  126 (328)
T 3fe3_A           81 EVI------ETEKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSA  126 (328)
T ss_dssp             EEE------ECSSEEEEEECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             EEE------EECCEEEEEEECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            999      7888999999999999999999532    249999999999999876

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.84  E-value=2.1e-20  Score=130.02  Aligned_cols=110  Identities=27%  Similarity=0.350  Sum_probs=86.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||+|.+  +|+.||+|.+....  .....          ...|+..+..++ ||||+++++++.
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~--~~~~~----------~e~Ei~~~~~l~-HpNIv~l~g~~~   67 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWF----------REAEIYQTVMLR-HENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG--HHHHH----------HHHHHHTSTTCC-CTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhhHH----------HHHHHHHHhcCC-CCCCCcEEEEEE
Confidence            5789999999999999999986  58899999986421  11111          235667777888 999999999985


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+  .....+|||||||++|+|.++++.   .  .+++..+..++.|+++|
T Consensus        68 ~~~--~~~~~~~lV~Ey~~~gsL~~~l~~---~--~l~~~~~~~i~~~ia~g  112 (303)
T 3hmm_A           68 KDN--GTWTQLWLVSDYHEHGSLFDYLNR---Y--TVTVEGMIKLALSTASG  112 (303)
T ss_dssp             EEC--SSSEEEEEEEECCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             ecC--CCceEEEEEecCCCCCcHHHHHHh---C--CCCHHHHHHHHHHHHHH
Confidence            422  123468999999999999999952   2  48999999999999876

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.83  E-value=5.9e-20  Score=130.54  Aligned_cols=119  Identities=22%  Similarity=0.352  Sum_probs=97.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...+.|++.+.||+|+||.||++.+..++..+|+|.+...............     .+.+|+.++..+. ||||+++++
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~-----~~~~E~~il~~l~-hpnIv~l~~   82 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE-----EIEREVSILRQVL-HPNIITLHD   82 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHH-----HHHHHHHHHTTCC-CTTBCCEEE
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHH-----HHHHHHHHHHhCC-CcCCCcEEE
Confidence            3456899999999999999999999999999999999865432111000000     1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      +..+.+|+||||++||+|.+++..    ...+++..++.++.||+.|
T Consensus        83 ~~------~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~a  127 (361)
T 2yab_A           83 VY------ENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDG  127 (361)
T ss_dssp             EE------ECSSEEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHH
T ss_pred             EE------EeCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            99      788899999999999999999842    2369999999999999876

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.83  E-value=1.6e-19  Score=128.27  Aligned_cols=113  Identities=23%  Similarity=0.369  Sum_probs=96.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||.||++.+..+++.+|+|.+.......+.            +.+|+.+++.+. ||||++++
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-hpniv~~~   82 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------------VQREIINHRSLR-HPNIVRFK   82 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHH------------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHH------------HHHHHHHHHhCC-CCCCCcEE
Confidence            45567899999999999999999999999999999999754332221            347888899998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+.+++||||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        83 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~  128 (361)
T 3uc3_A           83 EVI------LTPTHLAIIMEYASGGELYERICNA----GRFSEDEARFFFQQLLSG  128 (361)
T ss_dssp             EEE------ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------eeCCEEEEEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      6788999999999999999998532    249999999999999876

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.82  E-value=2.6e-19  Score=127.22  Aligned_cols=113  Identities=22%  Similarity=0.354  Sum_probs=96.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. ||||+++++++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~---------~~~E~~il~~l~-hpnIv~~~~~~   97 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---------LEREARICRKLQ-HPNIVRLHDSI   97 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHH---------HHHHHHHHHhCC-CCCCCeEEEEE
Confidence            35799999999999999999999999999999999865433322221         558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..|++|||++||+|.+++..    ...+++..++.++.||++|
T Consensus        98 ------~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~a  140 (362)
T 2bdw_A           98 ------QEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILES  140 (362)
T ss_dssp             ------ECSSEEEEEECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHH
T ss_pred             ------EeCCEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence                  778899999999999999998842    2359999999999999876

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.82  E-value=2.7e-19  Score=128.03  Aligned_cols=120  Identities=27%  Similarity=0.375  Sum_probs=100.2

Q ss_pred             ccCCCCCceEEEEEeecc--ceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          14 SLRDPRNKFKLQELIGEG--TYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G--~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+....++|++.+.||+|  +||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||
T Consensus        19 ~~~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~ni   88 (389)
T 3gni_B           19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTF---------LQGELHVSKLFN-HPNI   88 (389)
T ss_dssp             CCCCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH---------HHHHHHHHHHCC-CTTB
T ss_pred             cccCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHH---------HHHHHHHHHhCC-CCCC
Confidence            445677899999999999  9999999999999999999999754332221111         557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+.+|+||||+++|+|.+++....  ...+++..++.++.||+.|
T Consensus        89 v~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~  140 (389)
T 3gni_B           89 VPYRATF------IADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKA  140 (389)
T ss_dssp             CCEEEEE------EETTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHH
T ss_pred             CcEeEEE------EECCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHH
Confidence            9999999      67788999999999999999996432  2359999999999999876

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.82  E-value=4.8e-20  Score=130.46  Aligned_cols=120  Identities=21%  Similarity=0.307  Sum_probs=96.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .+.|++.+.||+|+||.||++.++.+++.+|+|++........... ..     ..+.+|+.+++.+. ||||+++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~-~~-----~~~~~E~~~l~~l~-hpnIv~~~~~~   95 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGL-ST-----EDLKREASICHMLK-HPHIVELLETY   95 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSC-CH-----HHHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccc-hH-----HHHHHHHHHHHhCC-CCCCCcEEEEE
Confidence            4679999999999999999999999999999999864211000000 00     01558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.+|+||||++||+|.+++......+..+++..++.++.||++|
T Consensus        96 ------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~a  142 (351)
T 3c0i_A           96 ------SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA  142 (351)
T ss_dssp             ------EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ------EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Confidence                  67888999999999999999886655555569999999999999876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.82  E-value=3.1e-19  Score=122.43  Aligned_cols=117  Identities=21%  Similarity=0.301  Sum_probs=97.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+..+..+..||||+++++++ 
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~e~~~~~~l~~h~~iv~~~~~~-   80 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQN---------ALREVYAHAVLGQHSHVVRYFSAW-   80 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHH---------HHHHHHHHHHSCSCTTBCCEEEEE-
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHH---------HHHHHHHHHHhCCCCCeeeeeeee-
Confidence            5799999999999999999999889999999999854332222211         457888888884499999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++..+++|||+++|+|.+++.........+++..++.++.|+++|
T Consensus        81 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~a  127 (289)
T 1x8b_A           81 -----AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG  127 (289)
T ss_dssp             -----EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             -----ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHH
Confidence                 67789999999999999999997655444469999999999999886

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.82  E-value=5e-19  Score=121.18  Aligned_cols=120  Identities=22%  Similarity=0.383  Sum_probs=99.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++.
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~   73 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM---------LVSEVNLLRELK-HPNIVRYYDR   73 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHH---------HHHHHHHHHhcC-CCCCCeEEEE
Confidence            456899999999999999999999989999999999864433222111         558999999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..    ...+.++++|||+++++|.+++......+..+++..++.++.|++.|
T Consensus        74 ~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  123 (279)
T 2w5a_A           74 IID----RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA  123 (279)
T ss_dssp             EEE----GGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             Eec----CCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHH
Confidence            753    34678999999999999999998766555569999999999999876

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.82  E-value=1.5e-19  Score=128.14  Aligned_cols=117  Identities=22%  Similarity=0.359  Sum_probs=94.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||++.++.+++.+|+|++.+.........   .     .+..|..++..+..||||+++++
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~---~-----~~~~E~~il~~~~~hp~Iv~l~~   91 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDV---E-----CTMTEKRILSLARNHPFLTQLFC   91 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTH---H-----HHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHH---H-----HHHHHHHHHHhccCCCceeeEEE
Confidence            445789999999999999999999999999999999975321111111   1     14578888888855999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus        92 ~~------~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  136 (353)
T 3txo_A           92 CF------QTPDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISA  136 (353)
T ss_dssp             EE------ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EE------EeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            99      7888999999999999999999542    249999999999999876

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.82  E-value=3.9e-19  Score=125.59  Aligned_cols=116  Identities=23%  Similarity=0.335  Sum_probs=96.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||++.++.+++.+|+|.+.+...........        +.+|..++..+..||||++++++
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------~~~E~~~l~~~~~hp~iv~l~~~   78 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW--------VQTEKHVFEQASNHPFLVGLHSC   78 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHH--------HHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHH--------HHHHHHHHHhcCCCCccCeEEEE
Confidence            4568999999999999999999999999999999998643322222111        45788888887449999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus        79 ~------~~~~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~a  122 (345)
T 3a8x_A           79 F------QTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLA  122 (345)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------EeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            9      7788999999999999999998532    249999999999999876

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=1.8e-19  Score=129.43  Aligned_cols=117  Identities=22%  Similarity=0.319  Sum_probs=95.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||++.++.+++.+|+|++++...........        +..|..++..+..||||+++++
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~--------~~~E~~il~~~~~hp~Iv~l~~  120 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDW--------VQTEKHVFEQASNHPFLVGLHS  120 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCH--------HHHHHHHHHHHTTCTTBCCEEE
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHH--------HHHHHHHHHhcCCCCCcCeeEE
Confidence            34568999999999999999999999999999999998643222211111        4468888887745999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus       121 ~~------~~~~~~~lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~a  165 (396)
T 4dc2_A          121 CF------QTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLA  165 (396)
T ss_dssp             EE------ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            99      7888999999999999999998632    249999999999999876

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.82  E-value=6.4e-19  Score=121.84  Aligned_cols=115  Identities=27%  Similarity=0.343  Sum_probs=97.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+.............        +.+|+.++..+. ||||++++++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-hp~iv~~~~~   79 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR--------FEREVHNSSQLS-HQNIVSMIDV   79 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHH--------HHHHHHHHTTCC-BTTBCCEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHH--------HHHHHHHHhcCC-CCCCceEEEe
Confidence            4568999999999999999999999999999999987544333222221        557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||++|++|.+++...    ..+++..++.++.|+++|
T Consensus        80 ~------~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  123 (294)
T 4eqm_A           80 D------EEDDCYYLVMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDG  123 (294)
T ss_dssp             E------ECSSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             e------eeCCeEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      7888999999999999999999532    259999999999999876

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.82  E-value=1.9e-19  Score=128.47  Aligned_cols=120  Identities=23%  Similarity=0.361  Sum_probs=99.2

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+.+....++|.+.+.||+|+||.||++.+..+++.+|+|.+..... .. ...        .+.+|+.+++.+. ||||
T Consensus       106 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~-~~~--------~~~~E~~~l~~l~-hpni  174 (377)
T 3cbl_A          106 KDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP-PD-LKA--------KFLQEARILKQYS-HPNI  174 (377)
T ss_dssp             CCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSC-HH-HHT--------TTTHHHHHHTTCC-CTTB
T ss_pred             ccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCC-HH-HHH--------HHHHHHHHHHhCC-CCCE
Confidence            34566778899999999999999999999988899999999874321 11 111        1557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+.+|+||||+++|+|.++++...   ..+++..++.++.|+++|
T Consensus       175 v~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~  225 (377)
T 3cbl_A          175 VRLIGVC------TQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAG  225 (377)
T ss_dssp             CCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEE------ecCCCcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHH
Confidence            9999999      67788999999999999999996422   248999999999999876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.81  E-value=2.8e-19  Score=130.13  Aligned_cols=113  Identities=22%  Similarity=0.358  Sum_probs=94.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++.+
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~---------~~~E~~il~~l~-hpnIv~l~~~~   79 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK---------LEREARICRLLK-HPNIVRLHDSI   79 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHH---------HHHHHHHHHHCC-BTTBCCEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHH---------HHHHHHHHHhCC-CcCCCeEEEEE
Confidence            45899999999999999999999999999999999864432222211         568999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..|++|||++||+|.+.+..   . ..+++..++.++.||++|
T Consensus        80 ------~~~~~~~lv~E~~~gg~L~~~i~~---~-~~~~e~~~~~i~~qil~a  122 (444)
T 3soa_A           80 ------SEEGHHYLIFDLVTGGELFEDIVA---R-EYYSEADASHCIQQILEA  122 (444)
T ss_dssp             ------ECSSEEEEEECCCBCCBHHHHHHH---C-SCCCHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEEeCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence                  788999999999999999999853   2 359999999999999876

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.81  E-value=2.1e-19  Score=126.66  Aligned_cols=115  Identities=24%  Similarity=0.360  Sum_probs=94.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||++.++.+++.+|+|.+++........   ..     .+.+|+.++..+. ||||+++++.
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~---~~-----~~~~E~~~l~~l~-hp~iv~l~~~   73 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE---VA-----HTVTESRVLQNTR-HPFLTALKYA   73 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTC---HH-----HHHHHHHHHHSCC-CTTBCCEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhH---HH-----HHHHHHHHHHhCC-CCcCcceEEE
Confidence            3568999999999999999999999999999999997521111100   11     1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||++||+|.++++..    ..+++..++.++.||+.|
T Consensus        74 ~------~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  117 (337)
T 1o6l_A           74 F------QTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA  117 (337)
T ss_dssp             E------ECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHH
T ss_pred             E------EeCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      7888999999999999999998532    259999999999999876

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=4.3e-19  Score=124.24  Aligned_cols=112  Identities=16%  Similarity=0.257  Sum_probs=94.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.+.....   ...         .+.+|+.++..+. ||||++++++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~---------~~~~E~~~l~~l~-hpnIv~~~~~   69 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT---DQV---------LVKKEISILNIAR-HRNILHLHES   69 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH---HHH---------HHHHHHHHHHHSC-CTTBCCEEEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc---cHH---------HHHHHHHHHHhCC-CCCCCeEeEE
Confidence            45789999999999999999999999999999999874321   111         1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.++++|||++||+|.+++.   ..+..+++..++.++.|+++|
T Consensus        70 ~------~~~~~~~lv~e~~~g~~L~~~l~---~~~~~~~~~~~~~i~~qi~~a  114 (321)
T 1tki_A           70 F------ESMEELVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEA  114 (321)
T ss_dssp             E------EETTEEEEEECCCCCCBHHHHHT---SSSCCCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCEEEEEEEeCCCCCHHHHHH---hcCCCCCHHHHHHHHHHHHHH
Confidence            9      67889999999999999999984   233369999999999999876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.81  E-value=8.3e-20  Score=131.78  Aligned_cols=120  Identities=27%  Similarity=0.371  Sum_probs=98.6

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++.+.||+|+||.||++.++.+++.+|+|++.+......   ...     ..+.+|..++..+. ||||++
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~---~~~-----~~~~~E~~il~~~~-hp~Iv~  125 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR---GEV-----SCFREERDVLVNGD-RRWITQ  125 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHH---GGG-----CCHHHHHHHHHHSC-TTTBCC
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhH---HHH-----HHHHHHHHHHHhcC-CCCeee
Confidence            445677899999999999999999999999999999999974211111   011     11557899999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      +..+.+|+||||++||+|.++++..   +..+++..++.++.||+.|
T Consensus       126 l~~~~------~~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~a  174 (412)
T 2vd5_A          126 LHFAF------QDENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMA  174 (412)
T ss_dssp             EEEEE------ECSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------eeCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence            99999      7889999999999999999999642   2359999999999999876

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.81  E-value=4.5e-19  Score=122.02  Aligned_cols=117  Identities=27%  Similarity=0.523  Sum_probs=98.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..++..+|+|.+........ ..         .+.+|+.+++.+. ||||++++++
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~---------~~~~E~~~l~~l~-hp~iv~~~~~   88 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-ME---------QIEAEIEVLKSLD-HPNIIKIFEV   88 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSC-HH---------HHHHHHHHHHTCC-CTTBCCEEEE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchh-HH---------HHHHHHHHHHhCC-CchHHhHHHh
Confidence            44689999999999999999999999999999999875332111 11         1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++|+|.+++......+..+++..++.++.|+++|
T Consensus        89 ~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  136 (285)
T 3is5_A           89 F------EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA  136 (285)
T ss_dssp             E------ECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             e------ecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHH
Confidence            9      67888999999999999999997655444579999999999999876

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.81  E-value=8.9e-20  Score=132.51  Aligned_cols=120  Identities=23%  Similarity=0.338  Sum_probs=98.0

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++.+.||+|+||.||++.++.+++.+|+|++.+.......        ....+..|..++..+. ||||++
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~--------~~~~~~~E~~il~~~~-hp~Iv~  138 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA--------ETACFREERDVLVNGD-SKWITT  138 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTT--------TTCCHHHHHHHHHHSC-TTTBCC
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHH--------HHHHHHHHHHHHHhCC-CCCEEE
Confidence            3456678999999999999999999999999999999998742111000        0111457889999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      +..+.+|+||||++||+|.++++.   .+..+++..++.++.|++.|
T Consensus       139 l~~~~------~~~~~~~lV~Ey~~gg~L~~~l~~---~~~~l~e~~~~~~~~qi~~a  187 (437)
T 4aw2_A          139 LHYAF------QDDNNLYLVMDYYVGGDLLTLLSK---FEDRLPEEMARFYLAEMVIA  187 (437)
T ss_dssp             EEEEE------ECSSEEEEEECCCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------eeCCEEEEEEecCCCCcHHHHHHH---ccCCCCHHHHHHHHHHHHHH
Confidence            99999      788899999999999999999953   22359999999999999876

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.81  E-value=3.7e-19  Score=123.94  Aligned_cols=124  Identities=28%  Similarity=0.406  Sum_probs=97.2

Q ss_pred             cccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812           9 HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      ......+..+.++|++.+.||+|+||.||++.+  .++.+|+|.+............         +.+|+.+++.++ |
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h   93 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNE---------FLREVAIMKRLR-H   93 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHH---------HHHHHHHHHHCC-C
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHH---------HHHHHHHHHhCC-C
Confidence            334455677888999999999999999999976  6788999998754433322221         558999999998 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++      ...+..+++|||+++|+|.+++...... ..+++..++.++.|+++|
T Consensus        94 p~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~a  149 (309)
T 3p86_A           94 PNIVLFMGAV------TQPPNLSIVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKG  149 (309)
T ss_dssp             TTBCCEEEEE------CSTTCCEEEEECCTTCBHHHHHHSTTHH-HHSCHHHHHHHHHHHHHH
T ss_pred             CCEeeEEEEE------EECCceEEEEecCCCCcHHHHHhhcCCC-CCCCHHHHHHHHHHHHHH
Confidence            9999999999      7788899999999999999999642211 138999999999999876

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.81  E-value=2.6e-19  Score=125.26  Aligned_cols=115  Identities=17%  Similarity=0.360  Sum_probs=94.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.++.+++.+|+|.+.+.......   ...     .+.+|..++..+. ||||+++++.
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~-----~~~~E~~~l~~l~-hp~Iv~~~~~   74 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK---QVE-----HTNDERLMLSIVT-HPFIIRMWGT   74 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT---CHH-----HHHHHHHHHHSCC-BTTBCCEEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhh---HHH-----HHHHHHHHHhhCC-CCCCceEeEE
Confidence            346899999999999999999999999999999999752111100   011     1457899999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||++||+|.++++.   . ..+++..++.++.||+.|
T Consensus        75 ~------~~~~~~~lv~e~~~gg~L~~~l~~---~-~~~~~~~~~~~~~qi~~a  118 (318)
T 1fot_A           75 F------QDAQQIFMIMDYIEGGELFSLLRK---S-QRFPNPVAKFYAAEVCLA  118 (318)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHH---T-SSCCHHHHHHHHHHHHHH
T ss_pred             E------EeCCEEEEEEeCCCCCCHHHHHHH---c-CCCCHHHHHHHHHHHHHH
Confidence            9      778899999999999999999953   2 259999999999999876

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=2.3e-19  Score=126.81  Aligned_cols=118  Identities=21%  Similarity=0.334  Sum_probs=93.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|.+.+.||+|+||.||++.++.+++.+|+|.+.+..........        .+..|..++..+..||||++++
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~E~~il~~~~~hp~iv~l~   84 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE--------CTMVEKRVLSLAWEHPFLTHMF   84 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHHHTTCTTBCCEE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHH--------HHHHHHHHHHhcCCCCCCCcEE
Confidence            45567999999999999999999999999999999999753211110000        1346788887764499999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      +..+.+|+||||++||+|.++++..    ..+++..++.++.|++.|
T Consensus        85 ~~~------~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  130 (345)
T 1xjd_A           85 CTF------QTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILG  130 (345)
T ss_dssp             EEE------ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------EeCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            999      7888999999999999999999642    249999999999999876

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.81  E-value=3.6e-19  Score=124.77  Aligned_cols=118  Identities=22%  Similarity=0.365  Sum_probs=95.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..+.|.+.+.||+|+||.||++.+..++..+|+|.+...............     .+.+|+.+++.+. ||||++++++
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~-hp~iv~~~~~   82 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-----DIEREVSILKEIQ-HPNVITLHEV   82 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHH-----HHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHH-----HHHHHHHHHHhCC-CCCCCcEEEE
Confidence            446799999999999999999999999999999999764332111000000     1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.++++|||+++|+|.+++..    ...+++..++.++.|++.|
T Consensus        83 ~------~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~a  126 (326)
T 2y0a_A           83 Y------ENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNG  126 (326)
T ss_dssp             E------ECSSEEEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHH
T ss_pred             E------EeCCEEEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHH
Confidence            9      678899999999999999999842    2359999999999999876

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.81  E-value=5.9e-19  Score=122.69  Aligned_cols=114  Identities=20%  Similarity=0.330  Sum_probs=95.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..++..+|+|.+....  .. ....        +.+|+.++..+. ||||+++++
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~-~~~~--------~~~E~~~l~~l~-hp~iv~~~~   74 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EE-TQRT--------FLKEVKVMRCLE-HPNVLKFIG   74 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HH-HHHH--------HHHHHHHHTTCC-CTTBCCEEE
T ss_pred             eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HH-HHHH--------HHHHHHHHHhCC-CcCcccEEE
Confidence            34678999999999999999999999999999999885422  11 1111        558999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..++||||+++|+|.++++.   .+..+++..++.++.|+++|
T Consensus        75 ~~------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~a  120 (310)
T 3s95_A           75 VL------YKDKRLNFITEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASG  120 (310)
T ss_dssp             EE------EETTEEEEEEECCTTCBHHHHHHH---CCTTSCHHHHHHHHHHHHHH
T ss_pred             EE------ecCCeeEEEEEecCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence            99      667889999999999999999953   23359999999999999876

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.81  E-value=5.2e-19  Score=124.84  Aligned_cols=109  Identities=24%  Similarity=0.377  Sum_probs=92.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.++.+++.+|+|.+.+....               ..+|+.++..+..||||++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------------~~~E~~~l~~~~~hp~iv~~~~~   84 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---------------PTEEIEILLRYGQHPNIITLKDV   84 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC---------------CHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC---------------hHHHHHHHHHhcCCCCcCeEEEE
Confidence            356799999999999999999999999999999999754321               22567777777459999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      +..+.+|+||||++||+|.+++..    ...+++..++.++.||+.|
T Consensus        85 ~------~~~~~~~lv~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~a  128 (342)
T 2qr7_A           85 Y------DDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKT  128 (342)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHH
T ss_pred             E------EcCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHH
Confidence            9      788899999999999999999842    2359999999999999876

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.81  E-value=2.9e-19  Score=127.90  Aligned_cols=118  Identities=19%  Similarity=0.358  Sum_probs=97.3

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|++++.||+|+||.||++.+..+++.+|+|.+.+.........   .     .+.+|+.+++.+. ||||+++
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~---~-----~~~~E~~il~~l~-hp~Iv~l   80 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEV---R-----NVFKELQIMQGLE-HPFLVNL   80 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCH---H-----HHHHHHHHHHTCC-CTTBCCE
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHH---H-----HHHHHHHHHHhCC-CCCCCcE
Confidence            34556899999999999999999999999999999999874221111111   1     1557999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+.+|+||||+.||+|.++++.    +..+++..++.++.|++.|
T Consensus        81 ~~~~------~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~a  127 (384)
T 4fr4_A           81 WYSF------QDEEDMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMA  127 (384)
T ss_dssp             EEEE------ECSSEEEEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHH
T ss_pred             EEEE------EeCCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            9999      788899999999999999999852    2359999999999999876

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.80  E-value=1.2e-19  Score=130.81  Aligned_cols=118  Identities=19%  Similarity=0.336  Sum_probs=96.9

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++++.||+|+||.||++.++.+++.+|+|++.+.......        ....+.+|+.++..++ ||||++
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~--------~~~~~~~E~~il~~l~-hp~Iv~  133 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS--------DSAFFWEERDIMAFAN-SPWVVQ  133 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTC--------CCSTHHHHHHHHHHCC-CTTBCC
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhH--------HHHHHHHHHHHHHhCC-CCCCCe
Confidence            3456678999999999999999999999999999999998742110000        0011457899999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+.+|+||||++||+|.++++.   .  .+++..++.++.||+.|
T Consensus       134 l~~~~------~~~~~~~lV~E~~~gg~L~~~l~~---~--~~~e~~~~~~~~qi~~a  180 (410)
T 3v8s_A          134 LFYAF------QDDRYLYMVMEYMPGGDLVNLMSN---Y--DVPEKWARFYTAEVVLA  180 (410)
T ss_dssp             EEEEE------ECSSEEEEEECCCTTEEHHHHHHH---C--CCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------EECCEEEEEEeCCCCCcHHHHHHc---C--CCCHHHHHHHHHHHHHH
Confidence            99999      788899999999999999998842   2  48999999999999876

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.80  E-value=9.7e-19  Score=122.08  Aligned_cols=119  Identities=24%  Similarity=0.417  Sum_probs=95.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|.+........ ...         +.+|+.+++.+. ||||+++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~---------~~~E~~~l~~l~-h~~iv~~~~   74 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP-VDV---------QMREFEVLKKLN-HKNIVKLFA   74 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC-HHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccch-HHH---------HHHHHHHHHhcC-CCCcceEEE
Confidence            456789999999999999999999999999999999874321111 111         447999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..    ......+++|||+++|+|.++++..... ..+++..++.++.|+++|
T Consensus        75 ~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~~  124 (319)
T 4euu_A           75 IEEE----TTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGG  124 (319)
T ss_dssp             EEEC----TTTCCEEEEEECCTTCBHHHHHHSGGGT-TCCCHHHHHHHHHHHHHH
T ss_pred             Eeec----CCCceEEEEEeCCCCCCHHHHHHHhccc-cCCCHHHHHHHHHHHHHH
Confidence            8842    2344789999999999999999754332 249999999999999876

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.80  E-value=4.1e-19  Score=124.40  Aligned_cols=113  Identities=27%  Similarity=0.432  Sum_probs=93.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+........  ..        .+.+|+.+++.+. ||||++++++
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~--------~~~~E~~~l~~l~-hpnIv~~~~~   73 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PE--------NIKKEICINKMLN-HENVVKFYGH   73 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------CHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccch--HH--------HHHHHHHHHHhCC-CCCCCeEEEE
Confidence            34789999999999999999999998999999999874322111  01        1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..|++|||+++|+|.+++.    .+..+++..++.++.|++.|
T Consensus        74 ~------~~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~a  117 (323)
T 3tki_A           74 R------REGNIQYLFLEYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAG  117 (323)
T ss_dssp             E------ECSSEEEEEEECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCeEEEEEEcCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHH
Confidence            9      77889999999999999999884    22359999999999999876

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.80  E-value=3.2e-19  Score=132.49  Aligned_cols=122  Identities=17%  Similarity=0.189  Sum_probs=99.7

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|.+.+.||+|+||.||++.++.+++.+|+|.+.+..........        .+..|+.++..++ ||||+++
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~--------~~~~E~~iL~~l~-hp~Iv~l  250 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQ--------GAMVEKKILAKVH-SRFIVSL  250 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHHCC-CTTBCCE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHH--------HHHHHHHHHHhcC-CCCEeeE
Confidence            345668999999999999999999999999999999999753211111011        1557999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      +..+.+|+||||++||+|.+++......+..+++..++.++.||+.|
T Consensus       251 ~~~~------~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~a  301 (543)
T 3c4z_A          251 AYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG  301 (543)
T ss_dssp             EEEE------ECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHH
T ss_pred             EEEE------eeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHH
Confidence            9999      77889999999999999999996544334469999999999999876

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.80  E-value=5e-19  Score=125.29  Aligned_cols=116  Identities=21%  Similarity=0.331  Sum_probs=95.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||++.+..+++.+|+|++.+.........   .     .+.+|+.++..+. ||||+++++
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~-----~~~~E~~~l~~l~-hp~iv~~~~  108 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI---E-----HTLNEKRILQAVN-FPFLVKLEF  108 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCH---H-----HHHHHHHHHTTCC-CTTBCCEEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHH---H-----HHHHHHHHHHhCC-CCCCCeEEE
Confidence            456789999999999999999999999999999999874221111111   1     1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus       109 ~~------~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  153 (350)
T 1rdq_E          109 SF------KDNSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLT  153 (350)
T ss_dssp             EE------ECSSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             EE------EcCCEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            99      7788999999999999999999642    249999999999999876

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.80  E-value=2.9e-18  Score=116.97  Aligned_cols=115  Identities=22%  Similarity=0.324  Sum_probs=95.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .+....++|++.+.||+|+||.||++.+. ++..+|+|.+.......+.            +.+|+.+++.+. ||||++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i~~   69 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEED------------FIEEAEVMMKLS-HPKLVQ   69 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHH------------HHHHHHHHHTCC-CTTBCC
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHH------------HHHHHHHHHhCC-CCCEee
Confidence            34566789999999999999999999975 5677999999754433221            447999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+..+++|||+++++|.+++..   ....+++..++.++.|+++|
T Consensus        70 ~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~  118 (269)
T 4hcu_A           70 LYGVC------LEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEG  118 (269)
T ss_dssp             EEEEE------CSSSSEEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------ecCCceEEEEEeCCCCcHHHHHHh---cCcccCHHHHHHHHHHHHHH
Confidence            99999      678889999999999999999953   23359999999999999876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.80  E-value=1.7e-18  Score=121.32  Aligned_cols=116  Identities=21%  Similarity=0.302  Sum_probs=94.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ....++|++.+.||+|+||.||++.+..++.   .+|+|.+...... . ....        +.+|+.+++.+. ||||+
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~-~~~~--------~~~E~~~l~~l~-h~~iv  113 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-R-QRRD--------FLSEASIMGQFD-HPNII  113 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCH-H-HHHH--------HHHHHHHHTTCC-CTTBC
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCH-H-HHHH--------HHHHHHHHHhCC-CCCCC
Confidence            3456789999999999999999999876554   4999998753221 1 1111        557999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      ...+..|+||||+++|+|.++++.   ....+++..++.++.|++.|
T Consensus       114 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~  163 (325)
T 3kul_A          114 RLEGVV------TRGRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAG  163 (325)
T ss_dssp             CEEEEE------CGGGCCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHH
T ss_pred             cEEEEE------EeCCccEEEeeCCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            999999      678889999999999999999853   23369999999999999876

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.79  E-value=4.4e-19  Score=125.73  Aligned_cols=118  Identities=21%  Similarity=0.287  Sum_probs=94.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++++.||+|+||.||++.++.+++.+|+|++.+..........        .+..|..++..+..||+|++++
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~--------~~~~E~~~l~~~~~hp~iv~l~   87 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVE--------CTMVEKRVLALPGKPPFLTQLH   87 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHTCTTCCTTBCCEE
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHH--------HHHHHHHHHHhcCCCCEEeeEE
Confidence            34567899999999999999999999888999999999753211111111        1457888888875599999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      +..+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus        88 ~~~------~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  133 (353)
T 2i0e_A           88 SCF------QTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIG  133 (353)
T ss_dssp             EEE------ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------EcCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      7888999999999999999999632    249999999999999876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.79  E-value=3.5e-18  Score=118.70  Aligned_cols=120  Identities=24%  Similarity=0.411  Sum_probs=98.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..++..+|+|.+.............        +.+|+.+++.+. ||||+++++
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-h~~i~~~~~   99 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD--------CIKEIDLLKQLN-HPNVIKYYA   99 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHH--------HHHHHHHHHTCC-CTTBCCEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHH--------HHHHHHHHHhCC-CCCEeeEEE
Confidence            34568999999999999999999998899999999997533222221111        457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++|+|.+++......+..+++..++.++.|++.|
T Consensus       100 ~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  148 (310)
T 2wqm_A          100 SF------IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA  148 (310)
T ss_dssp             EE------EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             EE------EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence            99      56788999999999999999998766555679999999999999876

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.79  E-value=7.4e-19  Score=121.71  Aligned_cols=113  Identities=40%  Similarity=0.615  Sum_probs=95.2

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+..........           +.+|+.+++.+. ||||++++
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-----------~~~E~~~l~~l~-hp~iv~~~   83 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-----------IINEILVMRENK-NPNIVNYL   83 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHH-----------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHH-----------HHHHHHHHhcCC-CCCCCeEe
Confidence            445678999999999999999999998999999999987433222111           447899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..|++|||+++|+|.+++..   .  .+++..++.++.|++.|
T Consensus        84 ~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~--~~~~~~~~~~~~qi~~~  128 (297)
T 3fxz_A           84 DSY------LVGDELWVVMEYLAGGSLTDVVTE---T--CMDEGQIAAVCRECLQA  128 (297)
T ss_dssp             EEE------EETTEEEEEEECCTTCBHHHHHHH---S--CCCHHHHHHHHHHHHHH
T ss_pred             EEE------EECCEEEEEEECCCCCCHHHHHhh---c--CCCHHHHHHHHHHHHHH
Confidence            999      667889999999999999999852   2  49999999999999876

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.79  E-value=1.5e-18  Score=124.35  Aligned_cols=112  Identities=16%  Similarity=0.327  Sum_probs=94.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|.+.......  ..         .+.+|+.++..+. ||||+++++++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~---------~~~~E~~il~~l~-hpnIv~~~~~~  117 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD--KY---------TVKNEISIMNQLH-HPKLINLHDAF  117 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH--HH---------HHHHHHHHHTTCC-STTBCCEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh--HH---------HHHHHHHHHHhCC-CcCCCeEEEEE
Confidence            467999999999999999999999999999999987532111  11         1558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.++++|||++||+|.+++.   ..+..+++..++.++.||+.|
T Consensus       118 ------~~~~~~~lv~E~~~gg~L~~~l~---~~~~~l~~~~~~~i~~qi~~a  161 (387)
T 1kob_A          118 ------EDKYEMVLILEFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEG  161 (387)
T ss_dssp             ------ECSSEEEEEEECCCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHH
T ss_pred             ------EeCCEEEEEEEcCCCCcHHHHHH---hhcCCCCHHHHHHHHHHHHHH
Confidence                  67889999999999999999884   223359999999999999876

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=4.9e-19  Score=132.11  Aligned_cols=121  Identities=21%  Similarity=0.244  Sum_probs=98.4

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|.+.+.||+|+||.||++.++.+++.+|+|.+.+.........        ..+.+|+.++..++ ||||++
T Consensus       178 ~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~--------~~~~~E~~iL~~l~-hp~Iv~  248 (576)
T 2acx_A          178 RQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGE--------AMALNEKQILEKVN-SRFVVS  248 (576)
T ss_dssp             TSCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCH--------HHHHHHHHHHHHCC-CTTBCC
T ss_pred             hcCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHH--------HHHHHHHHHHHHcC-CCCEee
Confidence            334667889999999999999999999999999999999974221111100        11457999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      +..+.+|+||||++||+|.+++....  ...+++..++.++.||+.|
T Consensus       249 l~~~~------~~~~~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~a  298 (576)
T 2acx_A          249 LAYAY------ETKDALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCG  298 (576)
T ss_dssp             EEEEE------ECSSEEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------eeCCEEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHH
Confidence            99999      77889999999999999999985422  2349999999999999876

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.79  E-value=2.9e-18  Score=117.63  Aligned_cols=122  Identities=19%  Similarity=0.330  Sum_probs=95.5

Q ss_pred             cccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812           7 SRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      +.......+....++|++.+.||+|+||.||++.+. ++..+|+|.+.........            +.+|+.++..+.
T Consensus        11 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~   77 (283)
T 3gen_A           11 TAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDE------------FIEEAKVMMNLS   77 (283)
T ss_dssp             -----CCTTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHH------------HHHHHHHHHTCC
T ss_pred             ccCCCCCCccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHH------------HHHHHHHHhcCC
Confidence            334455677788899999999999999999999874 5667999999754433221            447899999998


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ||||+++++++      ...+..+++|||+++++|.+++....   ..+++..++.++.|++.|
T Consensus        78 -h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~  132 (283)
T 3gen_A           78 -HEKLVQLYGVC------TKQRPIFIITEYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEA  132 (283)
T ss_dssp             -CTTBCCEEEEE------CSSSSEEEEECCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHH
T ss_pred             -CCCEeeEEEEE------ecCCCeEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHH
Confidence             99999999999      77888999999999999999995422   259999999999999876

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.79  E-value=1.1e-18  Score=128.63  Aligned_cols=118  Identities=24%  Similarity=0.390  Sum_probs=99.3

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +.+....++|++.+.||+|+||.||++.+..++..+|+|.+.......+.            +.+|+.+++.+. ||||+
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-hpniv  279 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------------FLKEAAVMKEIK-HPNLV  279 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHH------------HHHHHHHHHHCC-CTTBC
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHH------------HHHHHHHHHhcC-CCCEe
Confidence            44566778999999999999999999999888899999998754332211            457999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      ...+.+|+||||+++|+|.++++...  ...+++..++.++.||+.|
T Consensus       280 ~l~~~~------~~~~~~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~  330 (495)
T 1opk_A          280 QLLGVC------TREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSA  330 (495)
T ss_dssp             CEEEEE------CSSSSCEEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHH
T ss_pred             eEEEEE------ecCCcEEEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHH
Confidence            999999      67788999999999999999996422  2358999999999999876

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.79  E-value=5.5e-18  Score=116.29  Aligned_cols=114  Identities=22%  Similarity=0.338  Sum_probs=96.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. ||||+++++.
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~   73 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK---------LEREARICRKLQ-HPNIVRLHDS   73 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHH---------HHHHHHHHHHcC-CCCcCeEEEE
Confidence            457899999999999999999999999999999999754333222221         557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        74 ~------~~~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~  117 (284)
T 3kk8_A           74 I------QEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILES  117 (284)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------EcCCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      6788899999999999999988532    259999999999999876

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.79  E-value=9e-19  Score=123.89  Aligned_cols=104  Identities=22%  Similarity=0.409  Sum_probs=81.4

Q ss_pred             cccccCCCCCceEEEEEeeccceeEEEEEE-----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc
Q psy2812          11 NIDSLRDPRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL   85 (152)
Q Consensus        11 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~   85 (152)
                      ....+..+.++|++.+.||+|+||.||++.     ...+++.+|+|.+...... .....         +.+|+.++..+
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l   82 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRA---------LMSELKILIHI   82 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-HHHHH---------HHHHHHHHHHH
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCH-HHHHH---------HHHHHHHHHhh
Confidence            334567788999999999999999999998     4456678999999753221 11111         55799999999


Q ss_pred             CCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHh
Q psy2812          86 SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM  129 (152)
Q Consensus        86 ~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  129 (152)
                      ..||||+++++++.     .....++++|||+++|+|.++++..
T Consensus        83 ~~hpniv~~~~~~~-----~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           83 GHHLNVVNLLGACT-----KPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             CCCTTBCCEEEEEC-----STTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             cCCcceeeeeeeee-----cCCCceEEEEEecCCCcHHHHHHhc
Confidence            55999999999983     3345599999999999999999653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.79  E-value=2.6e-18  Score=118.46  Aligned_cols=112  Identities=27%  Similarity=0.388  Sum_probs=92.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++++ 
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~~-   70 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS---------ALREICLLKELK-HKNIVRLHDVL-   70 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHH---------HHHHHHHHTTCC-CTTBCCEEEEE-
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchH---------HHHHHHHHhcCC-CCCEeeEEeEE-
Confidence            5799999999999999999999999999999999754432221111         457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.++++|||+++ ++.+.+.   ..+..+++..++.++.|++.|
T Consensus        71 -----~~~~~~~lv~e~~~~-~l~~~~~---~~~~~l~~~~~~~~~~ql~~~  113 (292)
T 3o0g_A           71 -----HSDKKLTLVFEFCDQ-DLKKYFD---SCNGDLDPEIVKSFLFQLLKG  113 (292)
T ss_dssp             -----EETTEEEEEEECCSE-EHHHHHH---HTTTCCCHHHHHHHHHHHHHH
T ss_pred             -----EeCCEEEEEEecCCC-CHHHHHH---hCCCCCCHHHHHHHHHHHHHH
Confidence                 678889999999964 6666663   223469999999999999876

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.79  E-value=6.4e-18  Score=118.08  Aligned_cols=130  Identities=43%  Similarity=0.753  Sum_probs=101.2

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..+++.......++|++.+.||+|+||.||++.+..+++.+|+|.+.........            +.+|+.++..+..
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~------------~~~e~~~l~~l~~   79 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE------------IKQEINMLKKYSH   79 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHH------------HHHHHHHHHHHCC
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHH------------HHHHHHHHHhccC
Confidence            4455667778889999999999999999999999889999999998754332221            4468888888844


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||||+++++.+.........+.++++|||+++|+|.+++.....  ..+++..++.++.|++.|
T Consensus        80 h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~  141 (326)
T 2x7f_A           80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRG  141 (326)
T ss_dssp             STTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHH
T ss_pred             CCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHH
Confidence            99999999998643221225789999999999999999965332  359999999999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.79  E-value=2.7e-18  Score=119.59  Aligned_cols=122  Identities=22%  Similarity=0.395  Sum_probs=97.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+.....  .....         +.+|+.+++.+. ||||++++
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~---------~~~E~~~l~~l~-h~~iv~~~   92 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQ--QDREE---------AQREADMHRLFN-HPNILRLV   92 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSH--HHHHH---------HHHHHHHHHTCC-CTTBCCCC
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCH--HHHHH---------HHHHHHHHhhcC-CCCeeeEE
Confidence            4556789999999999999999999989999999999865321  11111         457999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++....  ......+++|||+++|+|.+++......+..+++..++.++.|+++|
T Consensus        93 ~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  146 (317)
T 2buj_A           93 AYCLRER--GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG  146 (317)
T ss_dssp             EEEEEEE--TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             EEEEecc--CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            9885321  24568999999999999999998765555679999999999999876

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.79  E-value=1.4e-18  Score=128.00  Aligned_cols=112  Identities=29%  Similarity=0.441  Sum_probs=90.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      +.|++++.||+|+||.||++.+..++..+|+|++............         +.+|+.+++.+. ||||+++++++ 
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpniv~~~~~~-  105 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK---------LLEEVAVLKLLD-HPNIMKLYDFF-  105 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHH---------HHHHHHHHTTCC-CTTBCCEEEEE-
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHH---------HHHHHHHHHhCC-CCCCCeEEEEE-
Confidence            4699999999999999999999999999999999754322211111         457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.+|+|||||++|+|.+++...    ..+++..++.++.||++|
T Consensus       106 -----~~~~~~~lv~e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~  148 (494)
T 3lij_A          106 -----EDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSG  148 (494)
T ss_dssp             -----ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             -----EeCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                 7788999999999999999988532    249999999999999876

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.79  E-value=2.1e-18  Score=119.02  Aligned_cols=113  Identities=14%  Similarity=0.167  Sum_probs=92.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.++..+. ||||++++++
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-hp~iv~~~~~   99 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQE--------TLSRTLRLSRID-KPGVARVLDV   99 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHH--------HHHHHHHHHTCC-CTTBCCEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHH--------HHHHHHHHhcCC-CCCcceeeEE
Confidence            3467999999999999999999998889999999997544332222111        457889999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..|++|||++|++|.++++    .+  ..+..+..++.|++.|
T Consensus       100 ~------~~~~~~~lv~e~~~g~~L~~~l~----~~--~~~~~~~~i~~ql~~a  141 (286)
T 3uqc_A          100 V------HTRAGGLVVAEWIRGGSLQEVAD----TS--PSPVGAIRAMQSLAAA  141 (286)
T ss_dssp             E------EETTEEEEEEECCCEEEHHHHHT----TC--CCHHHHHHHHHHHHHH
T ss_pred             E------EECCcEEEEEEecCCCCHHHHHh----cC--CChHHHHHHHHHHHHH
Confidence            9      67788999999999999999983    12  4666788899999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.79  E-value=1.5e-18  Score=119.31  Aligned_cols=119  Identities=24%  Similarity=0.384  Sum_probs=100.1

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      +..+....++|++.+.||+|+||.||++.+..++..+|+|.+.......+.            +.+|+.+++.+. ||||
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i   71 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------------FLKEAAVMKEIK-HPNL   71 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHH------------HHHHHHHHHHCC-CTTB
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHH------------HHHHHHHHHhCC-CCCE
Confidence            456667888999999999999999999999888999999998753321111            457999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+..+++|||+++++|.+++...  ....+++..++.++.|++.|
T Consensus        72 ~~~~~~~------~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~  123 (288)
T 3kfa_A           72 VQLLGVC------TREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSA  123 (288)
T ss_dssp             CCEEEEE------CSSSSEEEEEECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------ccCCCEEEEEEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHH
Confidence            9999999      7788899999999999999999642  23359999999999999876

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.79  E-value=2.4e-18  Score=117.17  Aligned_cols=116  Identities=14%  Similarity=0.213  Sum_probs=94.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+  .++.+|+|.+............         +.+|+.+++.+. ||||++++
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~   73 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRD---------FNEECPRLRIFS-HPNVLPVL   73 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHH---------HHHHGGGGCCCS-CTTEECEE
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHH---------HHHHHHHHHhcC-CCchhheE
Confidence            44567999999999999999999987  4788999999754333222211         557999999998 99999999


Q ss_pred             eeeeecCCCCCC--ceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEE--DQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...  +..+++|||+++|+|.+++..  ..+..+++..++.++.|+++|
T Consensus        74 ~~~------~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~  123 (271)
T 3kmu_A           74 GAC------QSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARG  123 (271)
T ss_dssp             EEE------CTTTSSSCEEEEECCTTCBHHHHHHS--CSSCCCCHHHHHHHHHHHHHH
T ss_pred             EEE------ccCCCCCeEeeecccCCCcHHHHHhh--cccCCCCHHHHHHHHHHHHHH
Confidence            998      444  789999999999999999953  222358999999999999876

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.79  E-value=1.5e-18  Score=123.49  Aligned_cols=119  Identities=20%  Similarity=0.321  Sum_probs=94.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEE-----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKD-----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ....++|++.+.||+|+||.||++..     ..++..+|+|.+...... .....         +.+|+.++..++ |||
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l~-hpn  135 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELD---------FLMEALIISKFN-HQN  135 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCH-HHHHH---------HHHHHHHHHHCC-CTT
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccCh-hhHHH---------HHHHHHHHHhCC-CCC
Confidence            45678899999999999999999994     345678999998643221 11111         557999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh---CCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      ...+..++||||+++|+|.++++....   ....+++..++.++.|+++|
T Consensus       136 Iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  193 (367)
T 3l9p_A          136 IVRCIGVS------LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  193 (367)
T ss_dssp             BCCEEEEE------CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEE------ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHH
Confidence            99999999      677889999999999999999975432   12358999999999999876

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.79  E-value=4.1e-18  Score=117.17  Aligned_cols=120  Identities=21%  Similarity=0.382  Sum_probs=93.7

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +....++|++.+.||+|+||.||++.+..+++.+|+|.+...........  .       +..+...++.+. ||||+++
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--~-------~~~~~~~~~~~~-h~~iv~~   71 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR--L-------LMDLDISMRTVD-CPFTVTF   71 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHH--H-------HHHHHHHHTTCC-CTTBCCE
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHH--H-------HHHHHHHHHhCC-CCeEEEE
Confidence            34567899999999999999999999999999999999875432221111  1       223444566676 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+..+++|||++ |+|.+++......+..+++..++.++.|++.|
T Consensus        72 ~~~~------~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  121 (290)
T 3fme_A           72 YGAL------FREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA  121 (290)
T ss_dssp             EEEE------ECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             eeee------eccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            9999      67888999999996 58988887655555679999999999999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.78  E-value=3.5e-18  Score=126.09  Aligned_cols=124  Identities=21%  Similarity=0.343  Sum_probs=93.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHH--hhhhhHHHHHHHHhccCCCCCccee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLV--LKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...++|.+++.||+|+||.||+|.+..++..+|+|.+................  .....+.+|+.+++.+. ||||+++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~  111 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKL  111 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CTTBCCE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CCCCCeE
Confidence            34578999999999999999999999999999999997543221100000000  00011568999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      +..+.+|+|||||+||+|.+++..  .  ..+++..++.++.|++.|
T Consensus       112 ~~~~------~~~~~~~lv~e~~~gg~L~~~l~~--~--~~~~~~~~~~i~~qi~~~  158 (504)
T 3q5i_A          112 FDVF------EDKKYFYLVTEFYEGGELFEQIIN--R--HKFDECDAANIMKQILSG  158 (504)
T ss_dssp             EEEE------ECSSEEEEEEECCTTCBHHHHHHH--H--SCCCHHHHHHHHHHHHHH
T ss_pred             EEEE------EcCCEEEEEEecCCCCcHHHHHHH--c--CCCCHHHHHHHHHHHHHH
Confidence            9999      788899999999999999998853  2  259999999999999876

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.78  E-value=1.8e-18  Score=120.83  Aligned_cols=120  Identities=20%  Similarity=0.308  Sum_probs=91.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.++.+++.+|+|.+.......  ....        +.+|+.+++.++ ||||+++++++.
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~--------~~~E~~~l~~l~-hpniv~~~~~~~   74 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL--AREK--------VMREVKALAKLE-HPGIVRYFNAWL   74 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTT--HHHH--------HHHHHHHHTSCC-CTTBCCEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchh--HHHH--------HHHHHHHHHhCC-CCCEeeEEEEEE
Confidence            47999999999999999999999899999999997543211  1111        558999999998 999999999885


Q ss_pred             ecCC---------------------------------------------------CCCCceEEEEEcccCCCChHHHHHH
Q psy2812         100 RRGG---------------------------------------------------QPEEDQLWFVMELCTGGSVTDLVQG  128 (152)
Q Consensus       100 ~~~~---------------------------------------------------~~~~~~~~lv~e~~~~g~L~~~l~~  128 (152)
                      ....                                                   .....+++++|||+++|+|.++++.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~  154 (332)
T 3qd2_B           75 ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR  154 (332)
T ss_dssp             ECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred             EeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence            4211                                                   0122358999999999999999964


Q ss_pred             hhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         129 MKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       129 ~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .... ...++..++.++.|++.|
T Consensus       155 ~~~~-~~~~~~~~~~i~~qi~~a  176 (332)
T 3qd2_B          155 RCSL-EDREHGVCLHIFIQIAEA  176 (332)
T ss_dssp             CCSG-GGSCHHHHHHHHHHHHHH
T ss_pred             ccCc-cchhhHHHHHHHHHHHHH
Confidence            3222 235677789999999876

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.78  E-value=2.1e-18  Score=121.00  Aligned_cols=120  Identities=20%  Similarity=0.346  Sum_probs=92.1

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ......++|++.+.||+|+||.||++.+.   .+++.+|+|.+.+.........  ..     .+.+|+.+++.+. |||
T Consensus        11 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~--~~-----~~~~E~~~l~~l~-hp~   82 (327)
T 3a62_A           11 PEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TA-----HTKAERNILEEVK-HPF   82 (327)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------------HHHHHHHCC-CTT
T ss_pred             CCCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhH--HH-----HHHHHHHHHHhCC-CCC
Confidence            34456689999999999999999999975   5788999999975432111100  00     1457999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++.+      ...+.+|++|||++||+|.+++...    ..+++..++.++.|++.|
T Consensus        83 iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~a  133 (327)
T 3a62_A           83 IVDLIYAF------QTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMA  133 (327)
T ss_dssp             BCCEEEEE------ECSSCEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             ccceeEEE------EcCCEEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHH
Confidence            99999999      6788999999999999999998532    248999999999999876

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.78  E-value=1.5e-18  Score=121.28  Aligned_cols=118  Identities=20%  Similarity=0.335  Sum_probs=95.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+...............     .+.+|+.++..+. ||||++++++
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~-h~~iv~~~~~   83 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSRE-----EIEREVSILRQVL-HHNVITLHDV   83 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHH-----HHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHH-----HHHHHHHHHHhCC-CCCcceEEEE
Confidence            346799999999999999999999999999999999754332211000000     1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.+++..    +..+++..++.++.|++.|
T Consensus        84 ~------~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~a  127 (321)
T 2a2a_A           84 Y------ENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDG  127 (321)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHH
T ss_pred             E------ecCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            9      678899999999999999999842    2358999999999999876

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.78  E-value=1.1e-18  Score=128.36  Aligned_cols=114  Identities=26%  Similarity=0.435  Sum_probs=95.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|++...........         .+.+|+.+++.+. ||||++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~~E~~~l~~l~-hpniv~~~~~   89 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS---------TILREVELLKKLD-HPNIMKLFEI   89 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHH---------HHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHH---------HHHHHHHHHHhCC-CCCcCeEEEE
Confidence            34679999999999999999999999999999999864221111111         1557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        90 ~------~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~a  133 (486)
T 3mwu_A           90 L------EDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSG  133 (486)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------EcCCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      7888999999999999999988532    259999999999999876

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=1.2e-18  Score=124.29  Aligned_cols=116  Identities=22%  Similarity=0.354  Sum_probs=88.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH-HhccCCCCCcceee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV-LKDLSVHPNIPSFY   95 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~i~~l~   95 (152)
                      ...++|++++.||+|+||.||++.++.++..+|+|++.+...........        +..|..+ ++.+. ||||++++
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~--------~~~e~~~ll~~~~-hp~Iv~l~  105 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKH--------IMSERNVLLKNVK-HPFLVGLH  105 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------------CCBCCCC-CTTBCCEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHH--------HHHHHHHHHHhCC-CCCCCCEE
Confidence            34578999999999999999999999999999999997543222111111        3356665 45566 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus       106 ~~~------~~~~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  151 (373)
T 2r5t_A          106 FSF------QTADKLYFVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASA  151 (373)
T ss_dssp             EEE------ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------EeCCEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      7888999999999999999999642    258999999999999876

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.78  E-value=2.7e-18  Score=120.71  Aligned_cols=121  Identities=21%  Similarity=0.375  Sum_probs=97.0

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+....++|++.+.||+|+||.||++.+..     ++..+|+|.+..... .. ...        .+.+|+.+++.+. |
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~-~~~--------~~~~E~~~l~~l~-h  109 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-AD-MQA--------DFQREAALMAEFD-N  109 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HH-HHH--------HHHHHHHHHHTCC-C
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HH-HHH--------HHHHHHHHHHhCC-C
Confidence            346677899999999999999999999863     447899999875322 11 111        1558999999998 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC--------------------CCCCCHHHHHHHHHhh
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR--------------------GVSLSEDQIAYILYGT  148 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~~~~qi  148 (152)
                      |||+++++++      ...+..+++|||+++|+|.++++.....                    ...+++..++.++.|+
T Consensus       110 p~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  183 (343)
T 1luf_A          110 PNIVKLLGVC------AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV  183 (343)
T ss_dssp             TTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred             CCEEEEEEEE------ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence            9999999999      6788899999999999999999753211                    1469999999999999


Q ss_pred             hcc
Q psy2812         149 VQV  151 (152)
Q Consensus       149 ~~a  151 (152)
                      ++|
T Consensus       184 ~~~  186 (343)
T 1luf_A          184 AAG  186 (343)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=2.7e-18  Score=119.28  Aligned_cols=123  Identities=23%  Similarity=0.403  Sum_probs=97.9

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      ...+....++|.+.+.||+|+||.||++.+.     .++..+|+|.+..... ......         +.+|+.+++.+.
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~   84 (314)
T 2ivs_A           15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRD---------LLSEFNVLKQVN   84 (314)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHH---------HHHHHHHHTTCC
T ss_pred             CcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHH---------HHHHHHHHhhCC
Confidence            3456677889999999999999999999873     3457899999874322 111111         557999999998


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--------------------CCCCCCHHHHHHHHH
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--------------------RGVSLSEDQIAYILY  146 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~  146 (152)
                       ||||+++++++      ...+..+++|||+++|+|.+++.....                    ....+++..++.++.
T Consensus        85 -hp~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  157 (314)
T 2ivs_A           85 -HPHVIKLYGAC------SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAW  157 (314)
T ss_dssp             -CTTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHH
T ss_pred             -CCceeeEEEEE------ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHH
Confidence             99999999999      678889999999999999999975332                    112489999999999


Q ss_pred             hhhcc
Q psy2812         147 GTVQV  151 (152)
Q Consensus       147 qi~~a  151 (152)
                      |+++|
T Consensus       158 qi~~~  162 (314)
T 2ivs_A          158 QISQG  162 (314)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99876

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.78  E-value=9.3e-19  Score=128.35  Aligned_cols=116  Identities=26%  Similarity=0.392  Sum_probs=95.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|++............        .+.+|+.+++.+. ||||+++++
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~--------~~~~Ei~~l~~l~-HpnIv~l~~   83 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG--------KIRREIQNLKLFR-HPHIIKLYQ   83 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHH--------HHHHHHHHHTTCC-CTTBCCEEE
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHH--------HHHHHHHHHHhCC-CCCCCcEEE
Confidence            3456899999999999999999999999999999999742211111111        1558999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+.+|+||||++||+|.+++.   . +..+++..++.++.||+.|
T Consensus        84 ~~------~~~~~~~lv~E~~~gg~L~~~l~---~-~~~l~~~~~~~i~~qi~~a  128 (476)
T 2y94_A           84 VI------STPSDIFMVMEYVSGGELFDYIC---K-NGRLDEKESRRLFQQILSG  128 (476)
T ss_dssp             EE------ECSSEEEEEEECCSSEEHHHHTT---S-SSSCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEeCCCCCcHHHHHH---h-cCCCCHHHHHHHHHHHHHH
Confidence            99      67889999999999999999984   2 2359999999999999876

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.78  E-value=8.2e-18  Score=114.57  Aligned_cols=114  Identities=23%  Similarity=0.377  Sum_probs=95.1

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +....++|++.+.||+|+||.||++.+. ++..+|+|.+.........            +.+|+.++..+. ||||+++
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i~~~   68 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDE------------FFQEAQTMMKLS-HPKLVKF   68 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHH------------HHHHHHHHHHCC-CTTBCCE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHH------------HHHHHHHHHhCC-CCCEeeE
Confidence            4556789999999999999999999764 5667999999754433221            447889999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+..+++|||+++++|.++++...   ..+++..++.++.|+++|
T Consensus        69 ~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~  116 (268)
T 3sxs_A           69 YGVC------SKEYPIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEG  116 (268)
T ss_dssp             EEEE------CSSSSEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHH
T ss_pred             EEEE------ccCCceEEEEEccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHH
Confidence            9999      77888999999999999999996432   249999999999999876

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.78  E-value=1.9e-18  Score=124.08  Aligned_cols=119  Identities=24%  Similarity=0.417  Sum_probs=95.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|.+....... ....         +.+|+.+++.+. ||||+++++
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------~~~E~~~l~~l~-hpnIv~~~~   74 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDV---------QMREFEVLKKLN-HKNIVKLFA   74 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS-CHHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc-hHHH---------HHHHHHHHHhcC-CCCCCeEEE
Confidence            45678999999999999999999999999999999987422111 1111         447999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..    ......+++|||+++|+|.++++..... ..+++..++.++.|++.|
T Consensus        75 ~~~~----~~~~~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~a  124 (396)
T 4eut_A           75 IEEE----TTTRHKVLIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGG  124 (396)
T ss_dssp             EEEC----TTTCCEEEEECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHH
T ss_pred             eecc----CCCCeeEEEEecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHH
Confidence            8842    2344789999999999999999653332 249999999999999876

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.78  E-value=3.5e-18  Score=120.84  Aligned_cols=111  Identities=25%  Similarity=0.352  Sum_probs=90.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+..... .+            .+.+|+.++..+. ||||+++++
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~------------~~~~E~~~l~~l~-h~niv~~~~  115 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KK------------IVRTEIGVLLRLS-HPNIIKLKE  115 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------------CHHHHHCC-CTTBCCEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-HH------------HHHHHHHHHHhCC-CCCCcceee
Confidence            345679999999999999999999988999999999875321 11            0447889999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..+++|||+++|+|.+++..    +..+++..++.++.|+++|
T Consensus       116 ~~------~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~  160 (349)
T 2w4o_A          116 IF------ETPTEISLVLELVTGGELFDRIVE----KGYYSERDAADAVKQILEA  160 (349)
T ss_dssp             EE------ECSSEEEEEECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHH
T ss_pred             eE------ecCCeEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            99      678889999999999999998842    2359999999999999876

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.78  E-value=1.2e-17  Score=115.29  Aligned_cols=120  Identities=24%  Similarity=0.343  Sum_probs=97.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc---hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN---IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~---~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+......   .........     .+.+|+.++..+.+||||++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~-----~~~~e~~~l~~l~~h~~i~~   88 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE-----ATLKEVDILRKVSGHPNIIQ   88 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHH-----HHHHHHHHHHHHTTCTTBCC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHH-----HHHHHHHHHHHhcCCCCEee
Confidence            3467899999999999999999999999999999999754321   111111111     15689999999966999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+..+++|||+++++|.++++..    ..+++..++.++.|++.|
T Consensus        89 ~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  136 (298)
T 1phk_A           89 LKDTY------ETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEV  136 (298)
T ss_dssp             EEEEE------ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             eeeee------ccCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHH
Confidence            99999      6788999999999999999999532    259999999999999876

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.78  E-value=5.2e-18  Score=117.84  Aligned_cols=113  Identities=27%  Similarity=0.411  Sum_probs=93.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~i~~~~~~~   71 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI---------ALREIRMLKQLK-HPNLVNLLEVF   71 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHH---------HHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHH---------HHHHHHHHHhCC-CCCccchhhee
Confidence            36899999999999999999999999999999998654322211111         457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++++|.++++.    ...+++..++.++.|+++|
T Consensus        72 ------~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~  114 (311)
T 4agu_A           72 ------RRKRRLHLVFEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQA  114 (311)
T ss_dssp             ------EETTEEEEEEECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHH
T ss_pred             ------ecCCeEEEEEEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHH
Confidence                  677889999999999988887742    2359999999999999876

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.78  E-value=3.6e-18  Score=117.12  Aligned_cols=116  Identities=23%  Similarity=0.408  Sum_probs=94.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+.+.||+|+||.||++.+..+++.+|+|.+...............     .+.+|+.+++.+. ||||+++++++ 
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~-h~~i~~~~~~~-   77 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSRE-----EIEREVNILREIR-HPNIITLHDIF-   77 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHH-----HHHHHHHHHHHCC-CTTBCCEEEEE-
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHH-----HHHHHHHHHHhCC-CCCeeehhhee-
Confidence            5799999999999999999999889999999998764332211000000     1557999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++|||+++++|.+++..  .  ..+++..++.++.|+++|
T Consensus        78 -----~~~~~~~lv~e~~~~~~L~~~l~~--~--~~~~~~~~~~~~~~i~~~  120 (283)
T 3bhy_A           78 -----ENKTDVVLILELVSGGELFDFLAE--K--ESLTEDEATQFLKQILDG  120 (283)
T ss_dssp             -----ECSSEEEEEEECCCSCBHHHHHHH--H--SSCCHHHHHHHHHHHHHH
T ss_pred             -----cCCCeEEEEEeecCCCcHHHHHHh--c--CCCCHHHHHHHHHHHHHH
Confidence                 678889999999999999999953  2  259999999999999876

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.78  E-value=3.8e-18  Score=125.27  Aligned_cols=116  Identities=28%  Similarity=0.456  Sum_probs=96.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|++.............        +.+|+.+++.+. ||||+++++
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-hpniv~~~~   93 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES--------LLREVQLLKQLD-HPNIMKLYE   93 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHH--------HHHHHHHHTTCC-CTTBCCEEE
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHH--------HHHHHHHHHhCC-CCCCCcEEE
Confidence            34568999999999999999999999999999999997543221111111        457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..|++|||+.+|+|.+++..    ...+++..++.++.|++.|
T Consensus        94 ~~------~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~  138 (484)
T 3nyv_A           94 FF------EDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSG  138 (484)
T ss_dssp             EE------ECSSEEEEEECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHH
T ss_pred             EE------EeCCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            99      778899999999999999998842    2359999999999999876

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.77  E-value=1.6e-17  Score=114.32  Aligned_cols=120  Identities=23%  Similarity=0.283  Sum_probs=96.7

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ......|.+.+.||+|+||.||++.+..++..+|+|.+............         +.+|+.+++.+. ||||++++
T Consensus        22 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~iv~~~   91 (290)
T 1t4h_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------FKEEAEMLKGLQ-HPNIVRFY   91 (290)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH---------HHHHHHHHTTCC-CTTBCCEE
T ss_pred             ccCceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHH---------HHHHHHHHHhCC-CCCeeeee
Confidence            34566799999999999999999999999999999998754333222211         558999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++....  .....++++|||+++|+|.++++..    ..+++..++.++.|++.|
T Consensus        92 ~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  141 (290)
T 1t4h_A           92 DSWESTV--KGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKG  141 (290)
T ss_dssp             EEEEEES--SSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             eeecccc--CCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHH
Confidence            9874322  3457799999999999999999542    248999999999999876

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.77  E-value=1.1e-17  Score=113.72  Aligned_cols=114  Identities=22%  Similarity=0.320  Sum_probs=95.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +....++|++.+.||+|+||.||++.+. ++..+|+|.+.......+.            +.+|+.+++.+. ||||+++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~------------~~~e~~~l~~l~-h~~i~~~   68 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEED------------FIEEAEVMMKLS-HPKLVQL   68 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHH------------HHHHHHHHHTCC-CTTBCCE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHH------------HHHHHHHHHhCC-CCCEeeE
Confidence            4556789999999999999999999975 5678999999764432211            447999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+..+++|||+++++|.++++.   ....+++..++.++.|+++|
T Consensus        69 ~~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~  116 (267)
T 3t9t_A           69 YGVC------LEQAPICLVTEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEG  116 (267)
T ss_dssp             EEEE------CSSSSCEEEECCCTTCBHHHHHHH---TTTCCCHHHHHHHHHHHHHH
T ss_pred             EEEE------ccCCCeEEEEeCCCCCcHHHHHhh---CcccCCHHHHHHHHHHHHHH
Confidence            9999      677889999999999999999953   22358999999999999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.77  E-value=6.6e-18  Score=117.82  Aligned_cols=127  Identities=19%  Similarity=0.258  Sum_probs=100.6

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHH
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVL   82 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   82 (152)
                      ..+..+.+....++|++.+.||+|+||.||++.+.     .++..+|+|.+...... ....         .+.+|+.++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~---------~~~~E~~~l   82 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERI---------EFLNEASVM   82 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH-HHHH---------HHHHHHHHG
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH-HHHH---------HHHHHHHHH
Confidence            34445667788899999999999999999999875     34678999998743221 1111         155799999


Q ss_pred             hccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------CCCCCHHHHHHHHHhhhcc
Q psy2812          83 KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        83 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+. ||||+++++++      ...+..+++|||+++|+|.++++.....      ...+++..++.++.|++.|
T Consensus        83 ~~l~-h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  150 (322)
T 1p4o_A           83 KEFN-CHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG  150 (322)
T ss_dssp             GGCC-CTTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred             HhcC-CCCEeeeEEEE------ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHH
Confidence            9998 99999999999      6778899999999999999999754321      1247999999999999876

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.77  E-value=1.9e-18  Score=121.77  Aligned_cols=113  Identities=25%  Similarity=0.427  Sum_probs=92.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..+++.+|+|.+...........        ..+.+|+.+++.+. ||||+++++++
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~--------~~~~~E~~~l~~l~-hpnIv~l~~~~   78 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMH--------MRVEREISYLKLLR-HPHIIKLYDVI   78 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCS--------HHHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHH--------HHHHHHHHHHHhCC-CCCCCeEEEEE
Confidence            4689999999999999999999999999999999874211111100        11558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.++++|||+ +|+|.+++..  .  ..+++..++.++.|+++|
T Consensus        79 ------~~~~~~~lv~E~~-~g~l~~~l~~--~--~~l~~~~~~~i~~qi~~a  120 (336)
T 3h4j_B           79 ------TTPTDIVMVIEYA-GGELFDYIVE--K--KRMTEDEGRRFFQQIICA  120 (336)
T ss_dssp             ------ECSSEEEEEECCC-CEEHHHHHHH--H--CSCCHHHHHHHHHHHHHH
T ss_pred             ------EeCCEEEEEEECC-CCcHHHHHHH--c--CCCCHHHHHHHHHHHHHH
Confidence                  7788999999999 7899998853  2  259999999999999876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.77  E-value=5.7e-18  Score=120.66  Aligned_cols=120  Identities=20%  Similarity=0.400  Sum_probs=94.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcC-------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVE-------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      ....++|++.+.||+|+||.||++.+..       .+..+|+|.+..... ......         +.+|+.+++.+..|
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~~h  146 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSD---------LVSEMEMMKMIGKH  146 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHH---------HHHHHHHHHHSCCC
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHH---------HHHHHHHHHHhcCC
Confidence            4456789999999999999999998642       345699999875321 111111         56899999999449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++      ...+.+|+||||+++|+|.++++....            ....+++..++.++.||+.|
T Consensus       147 pnIv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~a  215 (370)
T 2psq_A          147 KNIINLLGAC------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG  215 (370)
T ss_dssp             TTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHH
T ss_pred             CCEeeEEEEE------ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            9999999999      778889999999999999999965321            12358999999999999876

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.77  E-value=7.6e-18  Score=120.41  Aligned_cols=119  Identities=22%  Similarity=0.404  Sum_probs=92.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+......               ..+|+.+++.+. ||||++++
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---------------~~~E~~il~~l~-hpnIv~l~   66 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---------------KNRELDIMKVLD-HVNIIKLV   66 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---------------CCHHHHHHTTCC-CTTBCCEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---------------HHHHHHHHHHcC-CCCccchh
Confidence            34567899999999999999999999999999999998753221               226888999998 99999999


Q ss_pred             eeeeecCCC--------------------------------CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHH
Q psy2812          96 GLYLRRGGQ--------------------------------PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY  143 (152)
Q Consensus        96 ~~~~~~~~~--------------------------------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~  143 (152)
                      +++......                                ....++++||||++ |+|.+.+......+..+++..++.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~  145 (383)
T 3eb0_A           67 DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISI  145 (383)
T ss_dssp             EEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             heeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHH
Confidence            998653211                                23456999999997 688888876555556799999999


Q ss_pred             HHHhhhcc
Q psy2812         144 ILYGTVQV  151 (152)
Q Consensus       144 ~~~qi~~a  151 (152)
                      ++.|+++|
T Consensus       146 i~~qi~~a  153 (383)
T 3eb0_A          146 YIYQLFRA  153 (383)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999876

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.77  E-value=5.2e-18  Score=117.32  Aligned_cols=117  Identities=30%  Similarity=0.561  Sum_probs=94.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ....+.++|++.+.||+|+||.||++.+..++..+|+|.+.......  ...         +.+|+.++..+. ||||++
T Consensus        13 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~---------~~~e~~~l~~l~-h~~i~~   80 (302)
T 2j7t_A           13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--LED---------YIVEIEILATCD-HPYIVK   80 (302)
T ss_dssp             SSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC--HHH---------HHHHHHHHHHCC-CTTBCC
T ss_pred             cccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH--HHH---------HHHHHHHHhcCC-CCCEee
Confidence            34467789999999999999999999998899999999986432111  111         457899999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ...+..+++|||+++++|.+++...   +..+++..++.++.|+++|
T Consensus        81 ~~~~~------~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~  129 (302)
T 2j7t_A           81 LLGAY------YHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEA  129 (302)
T ss_dssp             EEEEE------ECC-CEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHH
T ss_pred             eeeee------eeCCeEEEEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHH
Confidence            99999      5678899999999999999988532   2359999999999999876

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.77  E-value=4.8e-18  Score=116.83  Aligned_cols=114  Identities=19%  Similarity=0.245  Sum_probs=93.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCC-------CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETG-------DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      ...++|.+.+.||+|+||.||++.+..++       ..+|+|.+......   ...        .+.+|+.+++.+. ||
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~---~~~--------~~~~E~~~l~~l~-h~   72 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRN---YSE--------SFFEAASMMSKLS-HK   72 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGG---GHH--------HHHHHHHHHHTSC-CT
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHH---HHH--------HHHHHHHHHHhCC-CC
Confidence            45679999999999999999999987766       36899988642211   111        1557999999998 99


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++      ...+..+++|||+++|+|.+++...   +..+++..++.++.|+++|
T Consensus        73 ~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~  125 (289)
T 4fvq_A           73 HLVLNYGVC------VCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAA  125 (289)
T ss_dssp             TBCCEEEEE------CCTTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHH
T ss_pred             CEeEEEEEE------EeCCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHH
Confidence            999999999      6788899999999999999999642   2248999999999999876

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.77  E-value=9.4e-18  Score=118.86  Aligned_cols=115  Identities=21%  Similarity=0.327  Sum_probs=95.8

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..++..+|+|.+...... . ...        .+.+|+.++..+. ||||++++
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~-~-~~~--------~~~~E~~~l~~l~-h~~iv~~~   97 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-A-IRN--------QIIRELQVLHECN-SPYIVGFY   97 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCH-H-HHH--------HHHHHHGGGGGCC-CTTBCCEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCH-H-HHH--------HHHHHHHHHHHCC-CCCEEEEe
Confidence            34567899999999999999999999989999999998754221 1 111        1557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+..+++|||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        98 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~  143 (360)
T 3eqc_A           98 GAF------YSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKG  143 (360)
T ss_dssp             EEE------EETTEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------EECCEEEEEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            999      6678899999999999999999532    248999999999999876

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.77  E-value=1.8e-17  Score=114.37  Aligned_cols=116  Identities=22%  Similarity=0.386  Sum_probs=96.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.+++.+. ||||+++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~iv~~~~   82 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK--------MSMEISIHRSLA-HQHVVGFHG   82 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHH--------HHHHHHHHHTCC-CTTBCCEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHH--------HHHHHHHHHhCC-CCCEeeeee
Confidence            35678999999999999999999999899999999987543222211111        457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..+++|||+++++|.+++...    ..+++..++.++.|+++|
T Consensus        83 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~  127 (294)
T 2rku_A           83 FF------EDNDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLG  127 (294)
T ss_dssp             EE------ECSSEEEEEEECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             ee------ccCCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            99      6788899999999999999988532    259999999999999876

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.77  E-value=1.1e-17  Score=116.49  Aligned_cols=117  Identities=31%  Similarity=0.410  Sum_probs=92.1

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++++.||+|+||.||++.+. +++.+|+|.+............         +.+|+.+++.++ ||||++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hp~iv~   83 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPST---------AIREISLLKELH-HPNIVS   83 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHH---------HHHHHHHHHHCC-CTTBCC
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHH---------HHHHHHHHHHcC-CCCEee
Confidence            34556789999999999999999999984 5889999998753322111111         457999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+.++++|||++ |+|.+++.   .....+++..++.++.|++.|
T Consensus        84 ~~~~~------~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~  131 (311)
T 3niz_A           84 LIDVI------HSERCLTLVFEFME-KDLKKVLD---ENKTGLQDSQIKIYLYQLLRG  131 (311)
T ss_dssp             EEEEE------CCSSCEEEEEECCS-EEHHHHHH---TCTTCCCHHHHHHHHHHHHHH
T ss_pred             eeeEE------ccCCEEEEEEcCCC-CCHHHHHH---hccCCCCHHHHHHHHHHHHHH
Confidence            99999      78889999999996 57888774   333459999999999999876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.77  E-value=2.1e-18  Score=120.08  Aligned_cols=119  Identities=21%  Similarity=0.297  Sum_probs=94.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.++..+. ||||+++++.
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-hp~iv~~~~~   80 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR--------FRREAQNAAALN-HPAIVAVYDT   80 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHH--------HHHHHTTCCCCC-CTTBCCEEEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHH--------HHHHHHHHHcCC-CCCcceEEEe
Confidence            4578999999999999999999999999999999997543322222211        557999999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +....  ......|+||||++||+|.++++..    ..+++..++.++.|+++|
T Consensus        81 ~~~~~--~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  128 (311)
T 3ork_A           81 GEAET--PAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQA  128 (311)
T ss_dssp             EEEEE--TTEEEEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             eeccC--CCCcccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            84321  1223569999999999999999532    259999999999999876

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.77  E-value=1.5e-17  Score=120.72  Aligned_cols=119  Identities=29%  Similarity=0.463  Sum_probs=94.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.||+|.+............         +.+|+.+++.+. ||||+++++
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~nIv~l~~   92 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR---------ILREITILNRLK-SDYIIRLYD   92 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHH---------HHHHHHHHHHcC-CCCcceEEE
Confidence            4567899999999999999999999999999999999754332222211         568999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..... .....+|+||||++ |+|.++++   . +..+++..++.++.||++|
T Consensus        93 ~~~~~~~-~~~~~~~lv~e~~~-~~L~~~~~---~-~~~l~~~~~~~i~~qil~a  141 (432)
T 3n9x_A           93 LIIPDDL-LKFDELYIVLEIAD-SDLKKLFK---T-PIFLTEEHIKTILYNLLLG  141 (432)
T ss_dssp             ECCCSCT-TTCCCEEEEEECCS-EEHHHHHH---S-SCCCCHHHHHHHHHHHHHH
T ss_pred             EEecCCC-CcCCeEEEEEecCC-cCHHHHHh---c-cCCCCHHHHHHHHHHHHHH
Confidence            9843111 11267999999995 69999884   2 2359999999999999876

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.77  E-value=2.1e-17  Score=115.85  Aligned_cols=122  Identities=20%  Similarity=0.374  Sum_probs=96.9

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCC-----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGD-----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+....++|++.+.||+|+||.||++.+..++.     .+|+|.+...... .....         +.+|+.++..+..|
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l~~h  109 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA-DEKEA---------LMSELKIMSHLGQH  109 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCH-HHHHH---------HHHHHHHHHHHCCC
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccCh-HHHHH---------HHHHHHHHHhhcCC
Confidence            456677899999999999999999999876554     6999998753321 11111         55799999999449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh----------CCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK----------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++      ...+..+++|||+++|+|.+++.....          ....+++..++.++.|++.|
T Consensus       110 ~~iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  176 (333)
T 2i1m_A          110 ENIVNLLGAC------THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG  176 (333)
T ss_dssp             TTBCCEEEEE------CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHH
T ss_pred             CCeeeEEEEE------ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHH
Confidence            9999999999      678889999999999999999975432          12358999999999999876

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.77  E-value=1.8e-17  Score=116.49  Aligned_cols=116  Identities=22%  Similarity=0.386  Sum_probs=96.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.+++.+. ||||+++++
T Consensus        38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-h~~iv~~~~  108 (335)
T 2owb_A           38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK--------MSMEISIHRSLA-HQHVVGFHG  108 (335)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHH--------HHHHHHHHHTCC-CTTBCCEEE
T ss_pred             ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHH--------HHHHHHHHHhCC-CCCCCeEEE
Confidence            34678999999999999999999999999999999987543222111111        457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+.+|++|||+++++|.+++...    ..+++..++.++.|+++|
T Consensus       109 ~~------~~~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~a  153 (335)
T 2owb_A          109 FF------EDNDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLG  153 (335)
T ss_dssp             EE------ECSSEEEEEECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             EE------ecCCeEEEEEecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHH
Confidence            99      6788999999999999999988532    259999999999999876

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.76  E-value=4e-18  Score=119.56  Aligned_cols=116  Identities=26%  Similarity=0.340  Sum_probs=92.3

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~   98 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGT---------AIREVSLLKELQ-HRNIIEL   98 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------------CHHHHHHGGGCC-CTTBCCE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchh---------HHHHHHHHHHcC-CCCcceE
Confidence            344567899999999999999999999999999999999754322111111         457999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+.+++||||++ |+|.+++..   . ..+++..++.++.|++.|
T Consensus        99 ~~~~------~~~~~~~lv~e~~~-~~L~~~~~~---~-~~~~~~~~~~i~~ql~~~  144 (329)
T 3gbz_A           99 KSVI------HHNHRLHLIFEYAE-NDLKKYMDK---N-PDVSMRVIKSFLYQLING  144 (329)
T ss_dssp             EEEE------EETTEEEEEEECCS-EEHHHHHHH---C-TTCCHHHHHHHHHHHHHH
T ss_pred             EEEE------ecCCEEEEEEecCC-CCHHHHHhh---c-CCCCHHHHHHHHHHHHHH
Confidence            9999      67888999999996 599998853   2 259999999999999876

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.76  E-value=2e-18  Score=119.36  Aligned_cols=122  Identities=30%  Similarity=0.431  Sum_probs=83.1

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..+....++|.+.+.||+|+||.||++.+..+++.+|+|.+......  ....        .+.+|+.++..+. ||||+
T Consensus         8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~--------~~~~e~~~l~~l~-h~~i~   76 (303)
T 2vwi_A            8 LPWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMD--------ELLKEIQAMSQCH-HPNIV   76 (303)
T ss_dssp             -----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC--------------------------CCCCCC-CTTBC
T ss_pred             cccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHH--------HHHHHHHHHhhcC-CCCEe
Confidence            34556778999999999999999999998888999999988643211  1111        1457889999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC----CCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR----GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~----~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+..+++|||+++++|.+++......    ...+++..++.++.|+++|
T Consensus        77 ~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  133 (303)
T 2vwi_A           77 SYYTSF------VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG  133 (303)
T ss_dssp             CEEEEE------ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHH
T ss_pred             eEEEEE------eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHH
Confidence            999999      6677899999999999999999753321    2358999999999999876

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.76  E-value=5.2e-18  Score=116.11  Aligned_cols=116  Identities=23%  Similarity=0.498  Sum_probs=94.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.++..+. ||||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-h~~i~~~~~~   79 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ--------RVQNEVKIHCQLK-HPSILELYNY   79 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHTTBC-CTTBCCEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHH--------HHHHHHHHHHhCC-CCCeEeEEEE
Confidence            446899999999999999999999889999999998642111111111        1557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.+++.   .....+++..++.++.|+++|
T Consensus        80 ~------~~~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~  124 (278)
T 3cok_A           80 F------EDSNYVYLVLEMCHNGEMNRYLK---NRVKPFSENEARHFMHQIITG  124 (278)
T ss_dssp             E------ECSSEEEEEEECCTTEEHHHHHH---TCSSCCCHHHHHHHHHHHHHH
T ss_pred             E------ccCCeEEEEEecCCCCcHHHHHh---hccCCCCHHHHHHHHHHHHHH
Confidence            9      67889999999999999999985   233469999999999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.76  E-value=1.5e-17  Score=118.90  Aligned_cols=122  Identities=20%  Similarity=0.403  Sum_probs=96.4

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC-------CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET-------GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-------~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+....++|.+.+.||+|+||.||++.+...       +..+|+|.+..... ......         +.+|+.+++.+.
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~  132 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSD---------LISEMEMMKMIG  132 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHH---------HHHHHHHHHHHC
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHH---------HHHHHHHHHHhc
Confidence            3456778999999999999999999987532       34699999875422 111111         557999999994


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------------CCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++++      ...+..++||||+++|+|.+++......            ...+++..++.++.|++.|
T Consensus       133 ~hpnIv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  203 (382)
T 3tt0_A          133 KHKNIINLLGAC------TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG  203 (382)
T ss_dssp             CCTTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHH
T ss_pred             CCchhhhheeee------ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHH
Confidence            499999999999      7788899999999999999999753311            1359999999999999876

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.76  E-value=1.3e-17  Score=115.25  Aligned_cols=118  Identities=20%  Similarity=0.305  Sum_probs=90.9

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEE----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ......|++.+.||+|+||.||++.    +..+++.+|+|.+....... ...         .+.+|+.++..+. ||||
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~---------~~~~E~~~l~~l~-h~~i   85 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN-HIA---------DLKKEIEILRNLY-HENI   85 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C-CHH---------HHHHHHHHHHTCC-CTTB
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch-hHH---------HHHHHHHHHHhCC-CCCe
Confidence            3456679999999999999999998    45678899999987432111 111         1457999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++..    .....++++|||+++|+|.+++...   ...+++..++.++.|++.|
T Consensus        86 ~~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~  138 (302)
T 4e5w_A           86 VKYKGICTE----DGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKG  138 (302)
T ss_dssp             CCEEEEEEC-------CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHH
T ss_pred             eeeeeEEec----CCCceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHH
Confidence            999999842    2236799999999999999999532   2359999999999999876

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.76  E-value=8.6e-18  Score=122.63  Aligned_cols=119  Identities=25%  Similarity=0.402  Sum_probs=86.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.||+|.+............         +.+|+.++..+. ||||+++++
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~---------~~~E~~~l~~l~-h~niv~l~~  119 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR---------ILREIAILNRLN-HDHVVKVLD  119 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHH---------HHHHHHHHHhCC-CCCCCceEE
Confidence            3457899999999999999999999999999999998754333222221         558999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..... +....+|+||||+ +|+|.++++   . ...+++..++.++.||+.|
T Consensus       120 ~~~~~~~-~~~~~~~lv~e~~-~~~L~~~~~---~-~~~l~~~~~~~~~~qi~~a  168 (458)
T 3rp9_A          120 IVIPKDV-EKFDELYVVLEIA-DSDFKKLFR---T-PVYLTELHIKTLLYNLLVG  168 (458)
T ss_dssp             ECCCSCT-TTCCCEEEEECCC-SEEHHHHHH---S-SCCCCHHHHHHHHHHHHHH
T ss_pred             EEecCCc-ccCceEEEEEecc-ccchhhhcc---c-CCCCCHHHHHHHHHHHHHH
Confidence            9854221 2346799999998 678888884   2 2359999999999999876

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.76  E-value=3.5e-18  Score=117.94  Aligned_cols=117  Identities=24%  Similarity=0.368  Sum_probs=93.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEE----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ....++|++.+.||+|+||.||++.    +..+++.+|+|.+....  ......         +.+|+.++..+. ||||
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~---------~~~E~~~l~~l~-h~~i   73 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRD---------FEREIEILKSLQ-HDNI   73 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHH---------HHHHHHHHHTCC-CTTB
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHH---------HHHHHHHHHhCC-CCCE
Confidence            3456799999999999999999998    45678899999987432  111111         558999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++..    .....++++|||+++|+|.+++....   ..+++..++.++.|++.|
T Consensus        74 v~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~  126 (295)
T 3ugc_A           74 VKYKGVCYS----AGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKG  126 (295)
T ss_dssp             CCEEEEECH----HHHTSCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEEec----CCCCceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHH
Confidence            999998832    22356899999999999999996432   249999999999999876

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.76  E-value=1.1e-17  Score=116.20  Aligned_cols=123  Identities=21%  Similarity=0.347  Sum_probs=97.3

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEE-----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKD-----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..+..+.++|++.+.||+|+||.||++.+     ..++..+|+|.+...... ....         .+.+|+.++..+..
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~---------~~~~E~~~l~~l~~   85 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TERE---------ALMSELKVLSYLGN   85 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-HHHH---------HHHHHHHHHHHHCC
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhH-HHHH---------HHHHHHHHHhhccc
Confidence            34567788999999999999999999985     345678999998754321 1111         15589999999944


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC--------------CCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR--------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||||+++++++      ...+..+++|||+++|+|.+++......              ...+++..++.++.|+++|
T Consensus        86 h~~i~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  157 (313)
T 1t46_A           86 HMNIVNLLGAC------TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG  157 (313)
T ss_dssp             CTTBCCEEEEE------CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHH
T ss_pred             CCCeeeEEEEE------ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            99999999999      6788899999999999999999653321              1248999999999999876

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.76  E-value=1e-17  Score=115.33  Aligned_cols=111  Identities=27%  Similarity=0.337  Sum_probs=90.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||++.+ .+++.+|+|.+............         +.+|+.+++.+. ||||+++++++ 
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~~-   69 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPST---------TIREISILKELK-HSNIVKLYDVI-   69 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHH---------HHHHHHGGGGCC-CTTBCCEEEEE-
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchh---------HHHHHHHHHhcC-CCCEeeeeeEE-
Confidence            5799999999999999999998 67889999998754322111111         457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.++++|||+++ +|.+++..   ....+++..++.++.|+++|
T Consensus        70 -----~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~  112 (288)
T 1ob3_A           70 -----HTKKRLVLVFEHLDQ-DLKKLLDV---CEGGLESVTAKSFLLQLLNG  112 (288)
T ss_dssp             -----ECSSCEEEEEECCSE-EHHHHHHT---STTCCCHHHHHHHHHHHHHH
T ss_pred             -----ccCCeEEEEEEecCC-CHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence                 677889999999964 88888853   22359999999999999876

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.76  E-value=1.3e-17  Score=114.03  Aligned_cols=112  Identities=29%  Similarity=0.453  Sum_probs=94.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+.........  .         +.+|+.+++.+. ||||+++++.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~--~---------~~~E~~~l~~l~-h~~i~~~~~~   74 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVD--R---------FKQEIEIMKSLD-HPNIIRLYET   74 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHH--H---------HHHHHHHHHTCC-CTTBCCEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHH--H---------HHHHHHHHHhCC-CCCEeeEEEE
Confidence            346799999999999999999999999999999998753322111  1         457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++++|.+++..  .  ..+++..++.++.|++.|
T Consensus        75 ~------~~~~~~~lv~e~~~~~~L~~~~~~--~--~~~~~~~~~~i~~~i~~~  118 (277)
T 3f3z_A           75 F------EDNTDIYLVMELCTGGELFERVVH--K--RVFRESDAARIMKDVLSA  118 (277)
T ss_dssp             E------ECSSEEEEEEECCCSCBHHHHHHH--H--CSCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCeEEEEEeccCCCcHHHHHHH--c--CCCCHHHHHHHHHHHHHH
Confidence            9      678889999999999999998853  2  249999999999999876

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.76  E-value=2.1e-18  Score=125.59  Aligned_cols=117  Identities=27%  Similarity=0.371  Sum_probs=90.2

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.||+|.+............        .+.+|+.+++.+. ||||++++
T Consensus       144 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-h~~iv~l~  214 (446)
T 4ejn_A          144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA--------HTLTENRVLQNSR-HPFLTALK  214 (446)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------------CCCCCS-CTTSCCEE
T ss_pred             CCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHH--------HHHHHHHHHHhCC-CCeEeeEE
Confidence            34557899999999999999999999999999999998742111111111        1457889999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+.+|+||||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus       215 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~a  260 (446)
T 4ejn_A          215 YSF------QTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA  260 (446)
T ss_dssp             EEE------EETTEEEEEECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHH
T ss_pred             EEE------eeCCEEEEEEeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      6778899999999999999998532    259999999999999876

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.76  E-value=1e-17  Score=116.99  Aligned_cols=130  Identities=18%  Similarity=0.320  Sum_probs=87.6

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      +.....+.++|++.+.||+|+||.||++.+..++.   .+|+|.+............         +.+|+.+++.++ |
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h   84 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE---------FLREAACMKEFD-H   84 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHH---------HHHHHHHHTTCC-C
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHH---------HHHHHHHHHHCC-C
Confidence            34556778899999999999999999999876654   7999998754322222111         568999999998 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--CCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++............+++|||+++|+|.+++.....  ....+++..++.++.|+++|
T Consensus        85 ~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  149 (323)
T 3qup_A           85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG  149 (323)
T ss_dssp             TTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred             CceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence            9999999998432111111234999999999999999965432  22258999999999999876

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.76  E-value=1.4e-17  Score=115.42  Aligned_cols=111  Identities=27%  Similarity=0.497  Sum_probs=92.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..+++.+|+|.+.........           .+.+|+.++..+. ||||+++++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~e~~~l~~l~-h~~i~~~~~~~   75 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS-----------SLENEIAVLKKIK-HENIVTLEDIY   75 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------------HHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchH-----------HHHHHHHHHHhCC-CCCeeehhhhc
Confidence            46899999999999999999999889999999999754321111           1457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        76 ------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  118 (304)
T 2jam_A           76 ------ESTTHYYLVMQLVSGGELFDRILER----GVYTEKDASLVIQQVLSA  118 (304)
T ss_dssp             ------ECSSEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHH
T ss_pred             ------ccCCEEEEEEEcCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence                  6788999999999999999998532    259999999999999876

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.76  E-value=3.8e-18  Score=121.72  Aligned_cols=115  Identities=19%  Similarity=0.280  Sum_probs=92.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...++|++.+.||+|+||.||++.+.   ..+..+|+|.+..... .. ...        .+.+|+.++..+. ||||++
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~-~~~--------~~~~E~~~l~~l~-h~niv~  110 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT-EK-QRR--------DFLGEASIMGQFD-HPNIIR  110 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC-HH-HHH--------HHHHHHHHHTTCC-CTTBCC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC-HH-HHH--------HHHHHHHHHHhCC-CCCCCe
Confidence            34568999999999999999999876   3566799999875321 11 111        1568999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+..++||||+++|+|.++++.   .+..+++..++.++.|+++|
T Consensus       111 ~~~~~------~~~~~~~lv~e~~~~~sL~~~l~~---~~~~~~~~~~~~i~~qi~~a  159 (373)
T 2qol_A          111 LEGVV------TKSKPVMIVTEYMENGSLDSFLRK---HDAQFTVIQLVGMLRGIASG  159 (373)
T ss_dssp             EEEEE------CSSSSCEEEEECCTTCBHHHHHHT---TTTCSCHHHHHHHHHHHHHH
T ss_pred             EEEEE------eeCCceEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            99999      677889999999999999999953   23359999999999999876

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.76  E-value=7.7e-18  Score=117.21  Aligned_cols=112  Identities=23%  Similarity=0.401  Sum_probs=92.3

Q ss_pred             CCceEEE-EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          19 RNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      .+.|.+. +.||+|+||.||++.+..+++.+|+|.+.........  .         +.+|+.++..+.+||||++++++
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~---------~~~E~~~l~~~~~h~~i~~~~~~   79 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--R---------VFREVEMLYQCQGHRNVLELIEF   79 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHH--H---------HHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHH--H---------HHHHHHHHHHhcCCCCeeeEEEE
Confidence            4678885 7899999999999999889999999999754322111  1         44788888885459999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        80 ~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~  123 (316)
T 2ac3_A           80 F------EEEDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASA  123 (316)
T ss_dssp             E------EETTEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------eeCCEEEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHH
Confidence            9      6778899999999999999999542    259999999999999876

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.76  E-value=1.3e-17  Score=114.76  Aligned_cols=113  Identities=27%  Similarity=0.445  Sum_probs=94.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++++
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h~~i~~~~~~~   90 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST---------ILREVELLKKLD-HPNIMKLFEIL   90 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHH---------HHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHH---------HHHHHHHHHhcc-CCCccEEEEEE
Confidence            35799999999999999999999889999999998753322111111         457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+++++|.+++...    ..+++..++.++.|++.|
T Consensus        91 ------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~  133 (287)
T 2wei_A           91 ------EDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSG  133 (287)
T ss_dssp             ------ECSSEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             ------eCCCeEEEEEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence                  6788899999999999999988532    249999999999999876

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.76  E-value=7.1e-19  Score=122.99  Aligned_cols=126  Identities=18%  Similarity=0.297  Sum_probs=100.8

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..++..+.....++|++.+.||+|+||.||++.+ .+++.+|+|.+..........          .+.+|+.++..+. 
T Consensus        18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~----------~~~~e~~~l~~l~-   85 (326)
T 3uim_A           18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGEL----------QFQTEVEMISMAV-   85 (326)
T ss_dssp             EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCC----------HHHHHHHGGGTCC-
T ss_pred             ceecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHH----------HHHHHHHHHHhcc-
Confidence            3455566777889999999999999999999974 468889999987532211111          1457999999998 


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||||+++++++      ...+..+++|||+++|+|.++++........+++..++.++.|++.|
T Consensus        86 h~~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  143 (326)
T 3uim_A           86 HRNLLRLRGFC------MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARG  143 (326)
T ss_dssp             CTTBCCCCEEE------CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHH
T ss_pred             CCCccceEEEE------ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence            99999999999      67888999999999999999997544444569999999999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.76  E-value=2.3e-17  Score=120.25  Aligned_cols=116  Identities=23%  Similarity=0.372  Sum_probs=94.3

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ..+....++|++.+.||+|+||.||++.+.  ++.+|+|.++.... .+            .+.+|+.+++.+. ||||+
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~-~~------------~~~~E~~~l~~l~-h~niv  249 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT-AQ------------AFLAEASVMTQLR-HSNLV  249 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTT-SH------------HHHHHHHHHHTCC-CTTBC
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchH-HH------------HHHHHHHHHHhcc-CCCEE
Confidence            345677889999999999999999999873  67899999975321 11            1557999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++.     ...+.+|+||||+++|+|.++++..  ....+++..++.++.|+++|
T Consensus       250 ~~~~~~~-----~~~~~~~iv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~  301 (450)
T 1k9a_A          250 QLLGVIV-----EEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEA  301 (450)
T ss_dssp             CEEEEEE-----CTTSCEEEEEECCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEE-----cCCCceEEEEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHH
Confidence            9999874     3445799999999999999999643  22347999999999999876

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.76  E-value=1.6e-17  Score=121.24  Aligned_cols=117  Identities=21%  Similarity=0.338  Sum_probs=95.7

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ...+....++|++.+.||+|+||.||++.+. .+..+|+|.+.......+.            +.+|+.+++.+. ||||
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-h~~i  245 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEA------------FLAEANVMKTLQ-HDKL  245 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHH------------HHHHHHHHTTCC-CTTB
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHH------------HHHHHHHHhhCC-CCCE
Confidence            3456778889999999999999999999874 4677999999754322111            557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      . .+.+|+||||+++|+|.++++.....  .+++..++.++.||+.|
T Consensus       246 v~l~~~~------~-~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~~qi~~~  296 (454)
T 1qcf_A          246 VKLHAVV------T-KEPIYIITEFMAKGSLLDFLKSDEGS--KQPLPKLIDFSAQIAEG  296 (454)
T ss_dssp             CCEEEEE------C-SSSCEEEECCCTTCBHHHHHHSHHHH--TCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------e-CCccEEEEeecCCCcHHHHHHhccCC--CCCHHHHHHHHHHHHHH
Confidence            9999988      3 56799999999999999999643322  48999999999999876

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.76  E-value=9.5e-18  Score=117.09  Aligned_cols=115  Identities=25%  Similarity=0.344  Sum_probs=80.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.+..+++.+|+|.+........ ...         +.+|+.+++.+. ||||+++++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~---------~~~E~~~l~~l~-hp~iv~~~~~~   72 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT-PST---------AIREISLMKELK-HENIVRLYDVI   72 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCS-CHH---------HHHHHHHHTTCC-BTTBCCEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccccc-HHH---------HHHHHHHHHhcC-CCCcceEEEEE
Confidence            4689999999999999999999988999999999975432111 111         447999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhC--CCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR--GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.++++|||++ |+|.+++......  ...+++..++.++.|+++|
T Consensus        73 ------~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~a  120 (317)
T 2pmi_A           73 ------HTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG  120 (317)
T ss_dssp             ------CCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHH
T ss_pred             ------EECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHH
Confidence                  78889999999997 6999998654321  2358999999999999876

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.76  E-value=2.1e-17  Score=115.10  Aligned_cols=113  Identities=25%  Similarity=0.323  Sum_probs=89.8

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+............         ...|+..+..+..||||+++++++ 
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~e~~~~~~~~~h~~iv~l~~~~-  126 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRAR---------KLAEVGSHEKVGQHPCCVRLEQAW-  126 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHH---------HHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHH---------HHHHHHHHHHhcCCCcEEEEEEEE-
Confidence            5799999999999999999999989999999988654333222222         234555555553499999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+.++++|||+ +++|.+++...   +..+++..++.++.|++.|
T Consensus       127 -----~~~~~~~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~a  169 (311)
T 3p1a_A          127 -----EEGGILYLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLA  169 (311)
T ss_dssp             -----EETTEEEEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHH
T ss_pred             -----EeCCEEEEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence                 6788899999999 77999888542   3369999999999999876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.76  E-value=1.5e-17  Score=113.83  Aligned_cols=119  Identities=20%  Similarity=0.340  Sum_probs=96.3

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +..+++..+.++|++.+.||+|+||.||++.+. .+..+|+|.+.......+.            +.+|+.+++.+. ||
T Consensus         3 ~~~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-h~   68 (279)
T 1qpc_A            3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDA------------FLAEANLMKQLQ-HQ   68 (279)
T ss_dssp             TTTCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHH------------HHHHHHHHHHCC-CT
T ss_pred             cchhhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHH------------HHHHHHHHHhCC-Cc
Confidence            344677888899999999999999999999864 5667999998754322211            457999999998 99


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++      . .+..+++|||+++++|.+++.....  ..+++..++.++.|++.|
T Consensus        69 ~i~~~~~~~------~-~~~~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~  121 (279)
T 1qpc_A           69 RLVRLYAVV------T-QEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEG  121 (279)
T ss_dssp             TBCCEEEEE------C-SSSCEEEEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHH
T ss_pred             CcceEEEEE------c-CCCcEEEEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHH
Confidence            999999988      3 4568999999999999999964322  248999999999999876

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.76  E-value=1.7e-17  Score=116.47  Aligned_cols=122  Identities=20%  Similarity=0.400  Sum_probs=94.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEc-------CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDV-------ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+....++|.+.+.||+|+||.||++.+.       .++..+|+|.+..... ......         +.+|+.+++.+.
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~   98 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSD---------LVSEMEMMKMIG   98 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHH---------HHHHHHHHHHHC
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHH---------HHHHHHHHHHhh
Confidence            45667789999999999999999999875       3466799999875322 111111         557999999994


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------------CCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++++      ...+.+++||||+++|+|.+++......            ...+++..++.++.|+++|
T Consensus        99 ~hp~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~a  169 (334)
T 2pvf_A           99 KHKNIINLLGAC------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG  169 (334)
T ss_dssp             CCTTBCCEEEEE------CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHH
T ss_pred             cCCCEeeEEEEE------ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            499999999999      6788899999999999999999643211            1248999999999999876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.76  E-value=7.4e-18  Score=115.48  Aligned_cols=115  Identities=21%  Similarity=0.434  Sum_probs=95.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+............        .+.+|+.+++.+. ||||++++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-h~~i~~~~~~   77 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--------QLRREVEIQSHLR-HPNILRLYGY   77 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHH--------HHHHHHHHHTTCC-CTTBCCEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHH--------HHHHHHHHHHcCC-CCCCcchhhe
Confidence            457899999999999999999999999999999998642211111111        1557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++|+|.+++...    ..+++..++.++.|++.|
T Consensus        78 ~------~~~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~  121 (279)
T 3fdn_A           78 F------HDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANA  121 (279)
T ss_dssp             E------ECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      6788899999999999999998542    249999999999999876

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.76  E-value=4.9e-18  Score=119.02  Aligned_cols=107  Identities=23%  Similarity=0.388  Sum_probs=89.9

Q ss_pred             ceEEE---EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQ---ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~---~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +|++.   +.||+|+||.||++.+..+++.+|+|.+....  ...            ..+|+.++..+.+||||++++++
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~------------~~~e~~~l~~l~~h~niv~~~~~   74 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM--EAN------------TQKEITALKLCEGHPNIVKLHEV   74 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG--HHH------------HHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh--hhh------------HHHHHHHHHHhcCCCCeeEEEEE
Confidence            56664   67999999999999999999999999986421  111            34688888888779999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......|+||||+++|+|.+++..    +..+++..++.++.|++.|
T Consensus        75 ~------~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~  118 (325)
T 3kn6_A           75 F------HDQLHTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSA  118 (325)
T ss_dssp             E------ECSSEEEEEECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHH
T ss_pred             E------EcCCEEEEEEEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence            9      778899999999999999999953    2359999999999999876

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.76  E-value=1.3e-17  Score=118.11  Aligned_cols=121  Identities=18%  Similarity=0.286  Sum_probs=95.8

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC---
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS---   86 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---   86 (152)
                      +++.......++|++++.||+|+||.||++.+..+++.+|+|.+.........            ...|+.++..+.   
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~e~~~l~~l~~~~   92 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS------------AKIEADILKKIQNDD   92 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHH------------HHHHHHHHHHTCCCS
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhh------------hHHHHHHHHHhcccC
Confidence            33444455678999999999999999999999999999999998642111111            335777777764   


Q ss_pred             -CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          87 -VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 -~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       .||||+++++.+      ...+..+++|||+ +++|.+++.....  ..+++..++.++.||+.|
T Consensus        93 ~~h~~iv~~~~~~------~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~a  149 (360)
T 3llt_A           93 INNNNIVKYHGKF------MYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKA  149 (360)
T ss_dssp             TTGGGBCCEEEEE------EETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHH
T ss_pred             CCCCCeeccccee------eECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHH
Confidence             399999999999      5678899999999 9999999964322  249999999999999876

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.3e-17  Score=117.40  Aligned_cols=122  Identities=19%  Similarity=0.394  Sum_probs=93.4

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|.+.+.||+|+||.||++.+.     .++..+|+|.+....... ...         .+.+|+.++..+..|
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~---------~~~~E~~~l~~l~~h  108 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS-ERE---------ALMSELKMMTQLGSH  108 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CH---------HHHHHHHHHHHHCCC
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHH-HHH---------HHHHHHHHHHhhcCC
Confidence            34567789999999999999999999973     345579999987432111 111         155799999999449


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-------------------CCCCCHHHHHHHHHhhh
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-------------------GVSLSEDQIAYILYGTV  149 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~~~~qi~  149 (152)
                      |||+++++++      ...+.++++|||+++|+|.+++......                   ...+++..++.++.|++
T Consensus       109 p~iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~  182 (344)
T 1rjb_A          109 ENIVNLLGAC------TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA  182 (344)
T ss_dssp             TTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHH
T ss_pred             CCeeeEEEEE------eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHH
Confidence            9999999999      6788899999999999999999643211                   12489999999999998


Q ss_pred             cc
Q psy2812         150 QV  151 (152)
Q Consensus       150 ~a  151 (152)
                      .|
T Consensus       183 ~a  184 (344)
T 1rjb_A          183 KG  184 (344)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.75  E-value=7.4e-18  Score=121.85  Aligned_cols=118  Identities=28%  Similarity=0.438  Sum_probs=91.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..+++.+|+|.+.............   .....+.+|+.+++.+. ||||+++++++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~  209 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREA---DPALNVETEIEILKKLN-HPCIIKIKNFF  209 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-----------CCHHHHHHHHHHCC-CTTBCCCCEEE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccc---hhHHHHHHHHHHHHhCC-CCCEeeEEEEE
Confidence            467999999999999999999999999999999997532211110000   00011558999999998 99999999988


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            . .+..|++|||+++|+|.+++.    .+..+++..++.++.|++.|
T Consensus       210 ------~-~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~  251 (419)
T 3i6u_A          210 ------D-AEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLA  251 (419)
T ss_dssp             ------E-SSEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHH
T ss_pred             ------e-cCceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHH
Confidence                  3 345899999999999998873    22369999999999999876

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.75  E-value=5.5e-18  Score=128.90  Aligned_cols=116  Identities=20%  Similarity=0.268  Sum_probs=94.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||++.++.+++.||+|++.+.........        ..+..|..++..+..||+|++++++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~--------~~~~~E~~~l~~~~~~~~i~~l~~~  410 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDV--------ECTMVEKRVLALPGKPPFLTQLHSC  410 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTT--------HHHHHHHHHHTCTTCCTTBCCEEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHH--------HHHHHHHHHHHhccCCCeEEEEEEE
Confidence            45689999999999999999999999999999999975211111100        1145788888888669999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      +..+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus       411 ~------~~~~~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~a  454 (674)
T 3pfq_A          411 F------QTMDRLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIG  454 (674)
T ss_dssp             C------BCSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------EeCCEEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            9      7889999999999999999999642    249999999999999876

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.75  E-value=1.6e-17  Score=115.45  Aligned_cols=113  Identities=39%  Similarity=0.674  Sum_probs=88.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..++..+|+|.+...... ..            +.+|+.++..+. ||||++++
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~------------~~~e~~~l~~l~-h~~i~~~~   90 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QE------------IIKEISIMQQCD-SPHVVKYY   90 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCC-HH------------HHHHHHHHHTCC-CTTBCCEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHH-HH------------HHHHHHHHHhCC-CCCCccEE
Confidence            45567899999999999999999999888999999998753211 11            447899999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ...+..+++|||+++++|.+++..   .+..+++..++.++.|++.|
T Consensus        91 ~~~------~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~  137 (314)
T 3com_A           91 GSY------FKNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKG  137 (314)
T ss_dssp             EEE------EETTEEEEEEECCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHH
T ss_pred             EEE------EeCCEEEEEeecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            999      567889999999999999999853   22359999999999999876

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.75  E-value=3.3e-17  Score=119.52  Aligned_cols=117  Identities=25%  Similarity=0.373  Sum_probs=95.3

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ...+..+.++|++.+.||+|+||.||++.+.. +..+|+|.+.......+.            +.+|+.+++.+. ||||
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-hp~i  241 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEA------------FLQEAQVMKKLR-HEKL  241 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHH------------HHHHHHHHHHCC-CTTB
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHH------------HHHHHHHHHhCC-CCCE
Confidence            34566788899999999999999999999754 456999998754332211            457999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      .. +.+++||||+++|+|.++++....  ..+++..++.++.|++.|
T Consensus       242 v~~~~~~------~~-~~~~iv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~  292 (452)
T 1fmk_A          242 VQLYAVV------SE-EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASG  292 (452)
T ss_dssp             CCEEEEE------CS-SSCEEEECCCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------cC-CceEEEehhhcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHH
Confidence            9999988      33 678999999999999999964332  248999999999999876

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.75  E-value=1.5e-17  Score=116.70  Aligned_cols=116  Identities=22%  Similarity=0.307  Sum_probs=95.2

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||++++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~   90 (331)
T 4aaa_A           21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI---------AMREIKLLKQLR-HENLVNLL   90 (331)
T ss_dssp             CBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHH---------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             hhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHH---------HHHHHHHHhhCC-CCCEeeEE
Confidence            34567899999999999999999999999999999998754332211111         457999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+..+++|||+++++|.+++.    ....+++..++.++.|++.|
T Consensus        91 ~~~------~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~  136 (331)
T 4aaa_A           91 EVC------KKKKRWYLVFEFVDHTILDDLEL----FPNGLDYQVVQKYLFQIING  136 (331)
T ss_dssp             EEE------EETTEEEEEEECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHH
T ss_pred             EEe------ecCCEEEEEEecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHH
Confidence            999      67888999999999888877763    22359999999999999876

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.75  E-value=1.1e-17  Score=117.03  Aligned_cols=119  Identities=22%  Similarity=0.348  Sum_probs=91.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEE-----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      ....++|++.+.||+|+||.||++.     +..++..+|+|.+...... .....         +.+|+.+++.+. |||
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l~-h~~   94 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE-QDELD---------FLMEALIISKFN-HQN   94 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCH-HHHHH---------HHHHHHHHHHCC-CTT
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch-hhHHH---------HHHHHHHHhhCC-CCC
Confidence            4567899999999999999999998     4456778999998643221 11111         557999999997 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC---CCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR---GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~---~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      ...+..|++|||+++|+|.+++......   ...+++..++.++.|++.|
T Consensus        95 iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  152 (327)
T 2yfx_A           95 IVRCIGVS------LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  152 (327)
T ss_dssp             BCCEEEEE------CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEE------cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence            99999999      6778899999999999999999653321   1348999999999999876

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.75  E-value=1.2e-17  Score=114.10  Aligned_cols=116  Identities=23%  Similarity=0.367  Sum_probs=94.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|.+............        .+.+|+.+++.+. ||||+++++
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-h~~i~~~~~   78 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG--------KIKREIQNLKLFR-HPHIIKLYQ   78 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHTCC-CTTBCCEEE
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHH--------HHHHHHHHHhcCC-CCCEeEEEE
Confidence            3457899999999999999999999889999999998742111111111        1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..+++|||+++++|.+++...    ..+++..++.++.|+++|
T Consensus        79 ~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  123 (276)
T 2h6d_A           79 VI------STPTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSA  123 (276)
T ss_dssp             EE------ECSSEEEEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             EE------ecCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHH
Confidence            99      6788999999999999999999532    248999999999999876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.75  E-value=2.1e-17  Score=113.35  Aligned_cols=118  Identities=28%  Similarity=0.487  Sum_probs=92.6

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      ..+....++|++.+.||+|+||.||++.+..+   +..+|+|.+.....  .....        .+.+|+.+++.+. ||
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~--------~~~~e~~~l~~l~-h~   76 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVRE--------KFLQEALTMRQFD-HP   76 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS--HHHHH--------HHHHHHHHHHTCC-CT
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC--HHHHH--------HHHHHHHHHHhCC-CC
Confidence            34567788999999999999999999998654   34588888764321  11111        1557999999998 99


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++       .++..|++|||+++|+|.++++.   .+..+++..++.++.|+++|
T Consensus        77 ~iv~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~  128 (281)
T 1mp8_A           77 HIVKLIGVI-------TENPVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTA  128 (281)
T ss_dssp             TBCCEEEEE-------CSSSCEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHH
T ss_pred             ccceEEEEE-------ccCccEEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            999999988       34568999999999999999953   23359999999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=2.8e-17  Score=115.48  Aligned_cols=116  Identities=21%  Similarity=0.239  Sum_probs=93.0

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCC----CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETG----DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~----~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ....++|.+.+.||+|+||.||++.+..++    ..+|+|.+..... .....         .+.+|+.++..+. ||||
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~---------~~~~E~~~l~~l~-h~~i  108 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRV---------DFLGEAGIMGQFS-HHNI  108 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHH---------HHHHHHHHHHTCC-CTTB
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHH---------HHHHHHHHHHhCC-CCCC
Confidence            456778999999999999999999876543    3489999874322 11111         1557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+..+++|||+++|+|.+++..   .+..+++..++.++.|+++|
T Consensus       109 v~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~a  159 (333)
T 1mqb_A          109 IRLEGVI------SKYKPMMIITEYMENGALDKFLRE---KDGEFSVLQLVGMLRGIAAG  159 (333)
T ss_dssp             CCEEEEE------CSSSSEEEEEECCTTEEHHHHHHH---TTTCSCHHHHHHHHHHHHHH
T ss_pred             CcEEEEE------ecCCCcEEEEeCCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHH
Confidence            9999999      778889999999999999999853   23369999999999999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.75  E-value=1.3e-17  Score=116.92  Aligned_cols=111  Identities=26%  Similarity=0.333  Sum_probs=92.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+...... .            .+.+|+.+++.+..||||++++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~------------~~~~E~~~l~~l~~h~~i~~~~~~   73 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-P------------QLHLEYRFYKQLGSGDGIPQVYYF   73 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-C------------CHHHHHHHHHHHCSCTTSCCEEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-H------------HHHHHHHHHHHhhCCCCCCEEEEE
Confidence            457899999999999999999999899999999998743221 1            144788999999449999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+ +++|.+++...   +..+++..++.++.|+++|
T Consensus        74 ~------~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~  117 (330)
T 2izr_A           74 G------PCGKYNAMVLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISR  117 (330)
T ss_dssp             E------EETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCccEEEEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHH
Confidence            8      6678899999999 99999999643   2369999999999999876

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.75  E-value=8.8e-18  Score=114.76  Aligned_cols=111  Identities=28%  Similarity=0.460  Sum_probs=92.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+.......  ...        .+.+|+.+++.+. ||||+++++++ 
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~--------~~~~e~~~l~~l~-h~~i~~~~~~~-   74 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPE--------NIKKEICINKMLN-HENVVKFYGHR-   74 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTT--HHH--------HHHHHHHHHHTCC-CTTBCCEEEEE-
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchh--hhH--------HHHHHHHHHHhcC-CCCceeeeeEE-
Confidence            57999999999999999999998899999999987432211  111        1457999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++|||+++++|.+++..    +..+++..++.++.|+++|
T Consensus        75 -----~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~  117 (276)
T 2yex_A           75 -----REGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAG  117 (276)
T ss_dssp             -----EETTEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHH
T ss_pred             -----EcCCEEEEEEEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHH
Confidence                 677889999999999999998832    2359999999999999876

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.75  E-value=3.9e-17  Score=112.23  Aligned_cols=118  Identities=22%  Similarity=0.303  Sum_probs=93.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhH-HHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI-EEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+.......... .....     .+.+|+.++..++ ||||++++
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~-h~~i~~~~   89 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-----EFQREVFIMSNLN-HPNIVKLY   89 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSH-----HHHHHHHHHTTCC-CTTBCCEE
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHH-----HHHHHHHHHHhCC-CCCchhhh
Confidence            45678999999999999999999999999999999987543322111 11001     1568999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ....  +++|||+++|+|.+++.   .....+++..++.++.|++.|
T Consensus        90 ~~~------~~~~--~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~~l~~~  134 (287)
T 4f0f_A           90 GLM------HNPP--RMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALG  134 (287)
T ss_dssp             EEE------TTTT--EEEEECCTTCBHHHHHH---CTTSCCCHHHHHHHHHHHHHH
T ss_pred             eee------cCCC--eEEEEecCCCCHHHHHh---cccCCccHHHHHHHHHHHHHH
Confidence            998      4444  69999999999988884   233469999999999999876

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.75  E-value=1.8e-17  Score=116.01  Aligned_cols=119  Identities=26%  Similarity=0.386  Sum_probs=93.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeE--EEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHV--AIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~--a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ...++|++.+.||+|+||.||++.+..++..+  ++|.+....... .. .        .+.+|+.++..+..||||+++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~-~~-~--------~~~~E~~~l~~l~~hp~iv~~   91 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-DH-R--------DFAGELEVLCKLGHHPNIINL   91 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------C--------HHHHHHHHHTTCCCCTTBCCE
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchH-HH-H--------HHHHHHHHHHhccCCCchhhh
Confidence            44578999999999999999999988888755  888886432111 11 1        145799999999449999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh------------hCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK------------KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+.+|++|||+++|+|.+++....            .....+++..++.++.|+++|
T Consensus        92 ~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~a  154 (327)
T 1fvr_A           92 LGAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  154 (327)
T ss_dssp             EEEE------EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHH
T ss_pred             ceee------eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHH
Confidence            9999      67788999999999999999996432            122369999999999999876

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.75  E-value=1.2e-17  Score=119.09  Aligned_cols=110  Identities=23%  Similarity=0.430  Sum_probs=85.9

Q ss_pred             ceEE--EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          21 KFKL--QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        21 ~~~~--~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .|.+  .+.||+|+||.||++.+..++..+|+|++.....  ....         .+.+|+.++..+. ||||+++++++
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~---------~~~~E~~~l~~l~-hpnIv~~~~~~  155 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKE---------EVKNEISVMNQLD-HANLIQLYDAF  155 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHH---------HHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHH---------HHHHHHHHHHhCC-CCCCCeEEEEE
Confidence            3544  6789999999999999999999999999975322  1111         1558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.+++||||+++|+|.+++..   .+..+++..++.++.||++|
T Consensus       156 ------~~~~~~~lv~E~~~~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~a  199 (373)
T 2x4f_A          156 ------ESKNDIVLVMEYVDGGELFDRIID---ESYNLTELDTILFMKQICEG  199 (373)
T ss_dssp             ------ECSSEEEEEEECCTTCEEHHHHHH---TGGGCCHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEeCCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence                  678889999999999999998853   22359999999999999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.75  E-value=1.6e-17  Score=115.55  Aligned_cols=116  Identities=20%  Similarity=0.290  Sum_probs=94.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.++..+. ||||+++++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-hp~iv~~~~  101 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTR--------MQREARTAGRLQ-EPHVVPIHD  101 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHH--------HHHHHHHHTTCC-CTTBCCEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHH--------HHHHHHHHhhcC-CCCeeEEEE
Confidence            34568999999999999999999998899999999987533222221111        557999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+.+|++|||+++++|.+++...    ..+++..++.++.|+++|
T Consensus       102 ~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~  146 (309)
T 2h34_A          102 FG------EIDGQLYVDMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSA  146 (309)
T ss_dssp             EE------EETTEEEEEEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             EE------eeCCeEEEEEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            99      6678899999999999999999532    259999999999999876

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.75  E-value=3.7e-18  Score=119.25  Aligned_cols=123  Identities=26%  Similarity=0.373  Sum_probs=97.9

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +++.......++|++.+.||+|+||.||++.+ .++..+|+|.+.......  ...         +.+|+.+++.+. ||
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~---------~~~E~~~l~~l~-h~   95 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQG--IEE---------FETEIETLSFCR-HP   95 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSH--HHH---------HHHHHHGGGSCC-CT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHH--HHH---------HHHHHHHHHhCC-CC
Confidence            34445556778999999999999999999985 468899999876533211  111         457999999998 99


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++      ...+..+++|||+++|+|.+++.........+++..++.++.|+++|
T Consensus        96 ~iv~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  151 (321)
T 2qkw_B           96 HLVSLIGFC------DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG  151 (321)
T ss_dssp             TBCCEEEEC------CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHH
T ss_pred             CEeeEEEEE------cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHH
Confidence            999999999      77888999999999999999985433223358999999999999876

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.75  E-value=3.4e-17  Score=116.54  Aligned_cols=120  Identities=23%  Similarity=0.361  Sum_probs=88.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.++ ||||++++
T Consensus        21 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpnIv~l~   90 (367)
T 1cm8_A           21 WEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR---------AYRELRLLKHMR-HENVIGLL   90 (367)
T ss_dssp             ECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHH---------HHHHHHHHHHCC-BTTBCCCS
T ss_pred             eeecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHH---------HHHHHHHHHhCC-CcCCCCce
Confidence            34567899999999999999999999999999999998654322211111         558999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++...........+|++|||+ +++|.++++.     ..+++..++.++.|+++|
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~  140 (367)
T 1cm8_A           91 DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKG  140 (367)
T ss_dssp             EEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHH
T ss_pred             eeEecCCccccCceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHH
Confidence            9984322112235579999999 8899998853     249999999999999876

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.75  E-value=1.4e-17  Score=114.30  Aligned_cols=117  Identities=20%  Similarity=0.400  Sum_probs=95.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..++..+|+|.+............        .+.+|+.++..+. ||||++++
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------~~~~e~~~l~~l~-h~~i~~~~   80 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH--------QLRREIEIQSHLR-HPNILRMY   80 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHTCC-CTTBCCEE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHH--------HHHHHHHHHhcCC-CCCEeeEE
Confidence            34557899999999999999999999888999999998642111111111        1557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+..+++|||+++|+|.+++...    ..+++..++.++.|+++|
T Consensus        81 ~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~  126 (284)
T 2vgo_A           81 NYF------HDRKRIYLMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADA  126 (284)
T ss_dssp             EEE------ECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EEE------EcCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            999      6788999999999999999998542    249999999999999876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.74  E-value=3.4e-17  Score=112.20  Aligned_cols=114  Identities=25%  Similarity=0.362  Sum_probs=92.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|++.+.||+|+||.||++.+..+++.+|+|.+.....   .            +.+|+.++..+. ||||+++++++.
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~------------~~~e~~~l~~l~-h~~i~~~~~~~~   74 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE---K------------AEREVKALAKLD-HVNIVHYNGCWD   74 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG---G------------GHHHHHHHHHCC-CTTBCCEEEEEE
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH---H------------HHHHHHHHHhCC-CCCEEEEeeeEe
Confidence            579999999999999999999988999999999875321   1            447889999998 999999999873


Q ss_pred             ecC----------CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRG----------GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~----------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...          .......++++|||+++|+|.+++.....  ..+++..++.++.|++.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~  134 (284)
T 2a19_B           75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKG  134 (284)
T ss_dssp             EEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHH
T ss_pred             ccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHH
Confidence            210          00124568999999999999999965332  359999999999999876

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.74  E-value=6.9e-18  Score=118.26  Aligned_cols=117  Identities=19%  Similarity=0.283  Sum_probs=94.3

Q ss_pred             CCCceEEE-EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          18 PRNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..+.|.+. +.||+|+||.||++.+..+++.+|+|.+............         +.+|+.++..+..||||+++++
T Consensus        26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE---------ILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHH---------HHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHH---------HHHHHHHHHhccCCCCEEEEEE
Confidence            34568887 8999999999999999999999999998753322211111         4578899998876899999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..+++|||+++|+|.+++..  .....+++..++.++.|++.|
T Consensus        97 ~~------~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~ql~~~  143 (327)
T 3lm5_A           97 VY------ENTSEIILILEYAAGGEIFSLCLP--ELAEMVSENDVIRLIKQILEG  143 (327)
T ss_dssp             EE------ECSSEEEEEEECCTTEEGGGGGSS--CC-CCCCHHHHHHHHHHHHHH
T ss_pred             EE------EeCCeEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHH
Confidence            99      778889999999999999998842  223469999999999999876

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.74  E-value=7.4e-17  Score=114.68  Aligned_cols=117  Identities=26%  Similarity=0.416  Sum_probs=94.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc--hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN--IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~--~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ++|.+.+.||+|+||.||++.+..+|+.||+|++......  ..........     +.+|+.++..+.+||||++++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~-----~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA-----TRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHH-----HHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHH-----HHHHHHHHHHhcCCCCEeEEEEE
Confidence            4699999999999999999999889999999999754321  1111111111     55899999998449999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..|++|||++|++|.+++...    ..+++..++.++.||+.|
T Consensus       169 ~------~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~  212 (365)
T 2y7j_A          169 Y------ESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEA  212 (365)
T ss_dssp             E------EBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             E------eeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHH
Confidence            8      6788899999999999999998532    259999999999999875

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.74  E-value=4.9e-17  Score=113.71  Aligned_cols=108  Identities=32%  Similarity=0.559  Sum_probs=91.3

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|+..+.||+|+||.||++.+..+++.+|+|.+..........           +.+|+.+++.+. ||||+++++.+  
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~-----------~~~E~~~l~~l~-h~niv~~~~~~--  111 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL-----------LFNEVVIMRDYQ-HFNVVEMYKSY--  111 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHH-----------HHHHHHHHTTCC-CTTBCCEEEEE--
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHH-----------HHHHHHHHHhCC-CCCcceEEEEE--
Confidence            5888999999999999999998899999999997543221111           447999999998 99999999999  


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ...+..+++|||+++|+|.+++.   .  ..+++..++.++.|+++|
T Consensus       112 ----~~~~~~~lv~e~~~~~~L~~~l~---~--~~l~~~~~~~i~~qi~~~  153 (321)
T 2c30_A          112 ----LVGEELWVLMEFLQGGALTDIVS---Q--VRLNEEQIATVCEAVLQA  153 (321)
T ss_dssp             ----EETTEEEEEECCCCSCBHHHHHT---T--CCCCHHHHHHHHHHHHHH
T ss_pred             ----EECCEEEEEEecCCCCCHHHHHH---h--cCCCHHHHHHHHHHHHHH
Confidence                56788999999999999999884   2  249999999999999876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.74  E-value=7.9e-18  Score=121.07  Aligned_cols=113  Identities=19%  Similarity=0.273  Sum_probs=87.7

Q ss_pred             CCceEEE-EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          19 RNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      .++|.+. +.||+|+||.||++.+..+++.+|+|.+...    ..            +.+|+.++..+..||||++++++
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~------------~~~E~~~~~~~~~hp~iv~l~~~  123 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PK------------ARREVELHWRASQCPHIVRIVDV  123 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HH------------HHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hh------------HHHHHHHHHHhcCCCCcceEeEE
Confidence            4567776 7899999999999999999999999998632    11            33577766555449999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +....  ....++|+||||++||+|.+++....  +..+++..++.++.||+.|
T Consensus       124 ~~~~~--~~~~~~~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~a  173 (400)
T 1nxk_A          124 YENLY--AGRKCLLIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEA  173 (400)
T ss_dssp             EEEEE--TTEEEEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHH
T ss_pred             Eeecc--cCCcEEEEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHH
Confidence            73211  23677999999999999999996322  2359999999999999876

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.74  E-value=1.5e-17  Score=115.05  Aligned_cols=124  Identities=26%  Similarity=0.352  Sum_probs=90.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHH-HH-------------HH-HhhhhhHHHHHHHH
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIE-EE-------------YL-VLKDLSIEEEYLVL   82 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~-~~-------------~~-~~~~~~~~~e~~~~   82 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+........... ..             .. ......+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            45689999999999999999999999999999999975432111000 00             00 00001256899999


Q ss_pred             hccCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          83 KDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        83 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+. ||||+++++++..    ...+.+|++|||+++++|.+++.     ...+++..++.++.|+++|
T Consensus        91 ~~l~-h~~iv~~~~~~~~----~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~  149 (298)
T 2zv2_A           91 KKLD-HPNVVKLVEVLDD----PNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKG  149 (298)
T ss_dssp             HTCC-CTTBCCEEEEEEC----SSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHH
T ss_pred             HhCC-CCCCCeEEEEEEc----CCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHH
Confidence            9998 9999999999842    23678999999999999988652     2359999999999999876

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.74  E-value=4.5e-17  Score=113.98  Aligned_cols=116  Identities=22%  Similarity=0.350  Sum_probs=93.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEE----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|++.+.||+|+||.||++.    +..++..+|+|.+.....  .....         +.+|+.+++.+. ||||+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~---------~~~E~~~l~~l~-h~~i~   87 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP--DQQRD---------FQREIQILKALH-SDFIV   87 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCH--HHHHH---------HHHHHHHHHTCC-CTTBC
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCH--HHHHH---------HHHHHHHHHhcC-CCcee
Confidence            445789999999999999999998    456788899999875321  11111         558999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++..    .....++++|||+++++|.+++.....   .+++..++.++.|++.|
T Consensus        88 ~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~a  139 (327)
T 3lxl_A           88 KYRGVSYG----PGRQSLRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKG  139 (327)
T ss_dssp             CEEEEEEC----SSSCEEEEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHH
T ss_pred             EEEEEEec----CCCceEEEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHH
Confidence            99998743    356779999999999999999964332   49999999999999876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.74  E-value=4.7e-17  Score=120.96  Aligned_cols=117  Identities=25%  Similarity=0.373  Sum_probs=95.5

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .+.+....++|++.+.||+|+||.||++.+.. +..+|+|.+.......+.            +.+|+.+++.+. ||||
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-hpni  324 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEA------------FLQEAQVMKKLR-HEKL  324 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHH------------HHHHHHHHHHCC-CTTB
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHH------------HHHHHHHHHhCC-CCCE
Confidence            34567788899999999999999999999754 456999999754332221            457999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      .. +.+|+||||+++|+|.++++....  ..+++..++.++.||++|
T Consensus       325 v~~~~~~------~~-~~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~  375 (535)
T 2h8h_A          325 VQLYAVV------SE-EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASG  375 (535)
T ss_dssp             CCEEEEE------CS-SSCEEEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------ee-ccceEeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHH
Confidence            9999988      33 679999999999999999964332  248999999999999876

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.74  E-value=3.9e-17  Score=113.11  Aligned_cols=113  Identities=39%  Similarity=0.618  Sum_probs=94.3

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      .+.+.|++.+.||+|+||.||++.+..+++.+|+|.+....... ....         +.+|+.++..+. ||||+++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------~~~e~~~l~~l~-h~~i~~~~~   87 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED-EIED---------IQQEITVLSQCD-SPYVTKYYG   87 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST-THHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH-HHHH---------HHHHHHHHHhCC-CCCEeEEEE
Confidence            45567999999999999999999998899999999997543221 1111         457899999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      ...+..+++|||+++++|.+++.   .  ..+++..++.++.|++.|
T Consensus        88 ~~------~~~~~~~lv~e~~~~~~L~~~~~---~--~~~~~~~~~~~~~qi~~~  131 (303)
T 3a7i_A           88 SY------LKDTKLWIIMEYLGGGSALDLLE---P--GPLDETQIATILREILKG  131 (303)
T ss_dssp             EE------EETTEEEEEEECCTTEEHHHHHT---T--SCCCHHHHHHHHHHHHHH
T ss_pred             EE------ecCCeEEEEEEeCCCCcHHHHHh---c--CCCCHHHHHHHHHHHHHH
Confidence            99      56788999999999999999884   2  259999999999999876

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.74  E-value=5.4e-17  Score=114.78  Aligned_cols=115  Identities=37%  Similarity=0.569  Sum_probs=93.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +.+.|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.+++.+. ||||++++++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-hpniv~~~~~  122 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD--------IIKEVRFLQKLR-HPNTIQYRGC  122 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHH--------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHH--------HHHHHHHHHhCC-CCCEeeEEEE
Confidence            3456999999999999999999998899999999997544332222211        557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..++||||+. |+|.+++...   +..+++..++.++.|+++|
T Consensus       123 ~------~~~~~~~lv~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~a  166 (348)
T 1u5q_A          123 Y------LREHTAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQG  166 (348)
T ss_dssp             E------EETTEEEEEEECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHH
T ss_pred             E------EECCeEEEEEecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence            9      56788999999996 6888887532   2369999999999999876

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.74  E-value=2.3e-18  Score=121.22  Aligned_cols=97  Identities=35%  Similarity=0.554  Sum_probs=78.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+........ ......     .+.+|+.+++.++ ||||++++++
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~-----~~~~E~~~l~~l~-hpniv~~~~~   96 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI-NPKDVE-----RIKTEVRLMKKLH-HPNIARLYEV   96 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC----CHHH-----HHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhccc-CHHHHH-----HHHHHHHHHHhCC-CCCcceeehh
Confidence            35679999999999999999999999999999999874311000 000111     1568999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHH
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQ  127 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  127 (152)
                      +      ...+..++||||++||+|.+++.
T Consensus        97 ~------~~~~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A           97 Y------EDEQYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             E------ECSSEEEEEEECCCSCBHHHHEE
T ss_pred             h------ccCCeEEEEEeCCCCCcHHHHHH
Confidence            9      67889999999999999999884

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.74  E-value=2.4e-17  Score=115.26  Aligned_cols=114  Identities=23%  Similarity=0.319  Sum_probs=90.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+.  ++.||+|.+.....  ... .         ...|+.++..+. ||||++++
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~--~~~-~---------~~~E~~~l~~l~-hpniv~~~   84 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK--QSW-Q---------NEYEVYSLPGMK-HENILQFI   84 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH--HHH-H---------HHHHHHTSTTCC-CTTBCCEE
T ss_pred             ccchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch--HHH-H---------HHHHHHHHhcCC-CCCchhhc
Confidence            445678999999999999999999864  78899999864211  111 1         345888899998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++....  .....++++|||+++|+|.++++.   .  .+++..++.++.|+++|
T Consensus        85 ~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~---~--~~~~~~~~~i~~qi~~a  133 (322)
T 3soc_A           85 GAEKRGT--SVDVDLWLITAFHEKGSLSDFLKA---N--VVSWNELCHIAETMARG  133 (322)
T ss_dssp             EEEEEEC--SSSEEEEEEEECCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             ceeccCC--CCCceEEEEEecCCCCCHHHHHHh---c--CCCHHHHHHHHHHHHHH
Confidence            9985422  224568999999999999999943   2  49999999999999876

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.74  E-value=3.1e-17  Score=113.29  Aligned_cols=114  Identities=29%  Similarity=0.407  Sum_probs=90.2

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+...........         .+.+|+.+++.+. ||||+++++++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~~e~~~l~~l~-h~~i~~~~~~~   71 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---------TAIREISLLKELN-HPNIVKLLDVI   71 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCH---------HHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHH---------HHHHHHHHHHHcC-CCCeeeEEEEE
Confidence            4689999999999999999999988999999999864322111111         1457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||++ |+|.+++.....  ..+++..++.++.|+++|
T Consensus        72 ------~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~  115 (299)
T 2r3i_A           72 ------HTENKLYLVFEFLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQG  115 (299)
T ss_dssp             ------EETTEEEEEEECCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHH
T ss_pred             ------ecCCceEEEEEccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHH
Confidence                  66788999999996 699999864322  348999999999999876

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.74  E-value=1.4e-17  Score=115.72  Aligned_cols=123  Identities=20%  Similarity=0.352  Sum_probs=94.9

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+....++|++.+.||+|+||.||++.+.     .+++.+|+|.+...... .....         +.+|+.++..+..|
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~~l~~l~~h   90 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRA---------LMSELKILIHIGHH   90 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCH-HHHHH---------HHHHHHHHHHHCCC
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCc-HHHHH---------HHHHHHHHHhcccC
Confidence            45677889999999999999999999853     45678999998754321 11111         55799999999559


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC------------CCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR------------GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++.     .....++++|||+++|+|.+++......            +..+++..++.++.|+++|
T Consensus        91 p~iv~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  160 (316)
T 2xir_A           91 LNVVNLLGACT-----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG  160 (316)
T ss_dssp             TTBCCEEEEEC-----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHH
T ss_pred             CCeeeEEEEEe-----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHH
Confidence            99999999983     2345699999999999999999643221            1138999999999999876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.73  E-value=2.7e-17  Score=113.82  Aligned_cols=114  Identities=19%  Similarity=0.263  Sum_probs=89.4

Q ss_pred             CCCceEEE-EEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          18 PRNKFKLQ-ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..++|.+. +.||+|+||.||++.+..+++.+|+|.++..    ..            ..+|+.++..+..||||+++++
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~------------~~~e~~~~~~~~~h~~i~~~~~   78 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PK------------ARREVELHWRASQCPHIVRIVD   78 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HH------------HHHHHHHHHHHTTSTTBCCEEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HH------------HHHHHHHHHHhccCCCchhHHh
Confidence            44568887 7899999999999999999999999998642    11            3357777644444999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++....  .....++++|||+++|+|.+++...  .+..+++..++.++.|++.|
T Consensus        79 ~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~  129 (299)
T 3m2w_A           79 VYENLY--AGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEA  129 (299)
T ss_dssp             EEEEEE--TTEEEEEEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHH
T ss_pred             hhhhhc--CCCceEEEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHH
Confidence            883211  2367899999999999999999642  22359999999999999876

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.73  E-value=6.3e-17  Score=112.52  Aligned_cols=129  Identities=20%  Similarity=0.273  Sum_probs=93.6

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcC---CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVE---TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      +.......++|.+.+.||+|+||.||++....   ++..+|+|.+............         +.+|+.+++.+. |
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h   95 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEE---------FLSEAACMKDFS-H   95 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHH---------HHHHHHHHHTCC-C
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHH---------HHHHHHHHhcCC-C
Confidence            34556677899999999999999999998765   3457999998754333322221         557999999998 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhh--hCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK--KRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++..... ......+++|||+++|+|.+++....  .....+++..++.++.|+++|
T Consensus        96 ~~iv~~~~~~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  159 (313)
T 3brb_A           96 PNVIRLLGVCIEMSS-QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG  159 (313)
T ss_dssp             TTBCCCCEEEEC--------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHH
T ss_pred             CCeeeeeEEEeeccc-cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHH
Confidence            999999999853211 11235699999999999999985432  233469999999999999876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.73  E-value=4.7e-17  Score=110.91  Aligned_cols=114  Identities=26%  Similarity=0.395  Sum_probs=87.4

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+  .+..+|+|.+.........  ....     .+.+|+.+++.+. ||||+++++
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~--~~~~-----~~~~e~~~l~~l~-h~~i~~~~~   73 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDIS--QTIE-----NVRQEAKLFAMLK-HPNIIALRG   73 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC------------CHH-----HHHHHHHHHHHCC-CTTBCCEEE
T ss_pred             cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHH--HHHH-----HHHHHHHHHHhcC-CCCEeeEEE
Confidence            4567899999999999999999987  4788999998753322111  1011     1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ...+..+++|||+++++|.++++   .  ..+++..++.++.|+++|
T Consensus        74 ~~------~~~~~~~lv~e~~~~~~L~~~~~---~--~~~~~~~~~~i~~~l~~~  117 (271)
T 3dtc_A           74 VC------LKEPNLCLVMEFARGGPLNRVLS---G--KRIPPDILVNWAVQIARG  117 (271)
T ss_dssp             EE------CCC--CEEEEECCTTEEHHHHHT---S--SCCCHHHHHHHHHHHHHH
T ss_pred             EE------ecCCceEEEEEcCCCCCHHHHhh---c--CCCCHHHHHHHHHHHHHH
Confidence            99      67888999999999999998883   2  259999999999999876

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.73  E-value=3.6e-17  Score=112.70  Aligned_cols=120  Identities=21%  Similarity=0.326  Sum_probs=91.2

Q ss_pred             cccccCCCCCceEEEE-EeeccceeEEEEEEE--cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812          11 NIDSLRDPRNKFKLQE-LIGEGTYGEVYWAKD--VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus        11 ~~~~~~~~~~~~~~~~-~lg~G~~g~V~~~~~--~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ....+....++|.+.+ .||+|+||.||++.+  ..++..+|+|.+........ ....        +.+|+.+++.+. 
T Consensus         7 ~~~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~--------~~~e~~~l~~l~-   76 (291)
T 1xbb_A            7 RPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-LKDE--------LLAEANVMQQLD-   76 (291)
T ss_dssp             ----CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-HHHH--------HHHHHHHHHTCC-
T ss_pred             CcceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHH-HHHH--------HHHHHHHHHhCC-
Confidence            3455667788999999 999999999999954  45677899999875322111 1111        557999999998 


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||||+++++++       ..+..+++|||+++++|.++++.    +..+++..++.++.|+++|
T Consensus        77 h~~i~~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~  129 (291)
T 1xbb_A           77 NPYIVRMIGIC-------EAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMG  129 (291)
T ss_dssp             CTTBCCEEEEE-------ESSSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEEE-------CCCCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHH
Confidence            99999999988       24568999999999999999953    2259999999999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.73  E-value=3.1e-17  Score=114.56  Aligned_cols=118  Identities=31%  Similarity=0.457  Sum_probs=89.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..+++.+|+|.+............ .  .....+.+|+.+++.+. ||||+++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~-~--~~~~~~~~E~~~l~~l~-h~~i~~~~~~~   84 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE-A--DPALNVETEIEILKKLN-HPCIIKIKNFF   84 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC------------------CHHHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhccccc-c--hhhhhHHHHHHHHHhCC-CCCCceEeeEE
Confidence            35799999999999999999999999999999998753221110000 0  00011558999999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ... ..|++|||+++|+|.+++..    +..+++..++.++.|++.|
T Consensus        85 ------~~~-~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~  126 (322)
T 2ycf_A           85 ------DAE-DYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLA  126 (322)
T ss_dssp             ------ESS-SEEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHH
T ss_pred             ------cCC-ceEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHH
Confidence                  333 38999999999999998842    2359999999999999876

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.73  E-value=6.3e-17  Score=118.39  Aligned_cols=116  Identities=24%  Similarity=0.375  Sum_probs=91.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.++ ||||+++++++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpnIv~l~~~~  130 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR---------AYRELVLMKCVN-HKNIISLLNVF  130 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHH---------HHHHHHHHHhCC-CCCCCcEEEEE
Confidence            46899999999999999999999999999999999754222222111         558999999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......+....+|+||||+++ +|.+.+.      ..+++..++.++.|++.|
T Consensus       131 ~~~~~~~~~~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~a  176 (464)
T 3ttj_A          131 TPQKTLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCG  176 (464)
T ss_dssp             CSCCSTTTCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHH
T ss_pred             ccCCccccCCeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHH
Confidence            543222334678999999965 5666662      138999999999999876

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.73  E-value=1.5e-17  Score=116.95  Aligned_cols=119  Identities=22%  Similarity=0.300  Sum_probs=93.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+.............   .....+.+|+.+++.+. ||||+++++++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~   98 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIED---PKLGKVTLEIAILSRVE-HANIIKVLDIF   98 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEE---TTTEEEEHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccch---HHHHHHHHHHHHHHhCC-CCCEeeEEEEE
Confidence            457999999999999999999999999999999998643221100000   00001447999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCC-ChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGG-SVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+.+| +|.++++.    ...+++..++.++.|++.|
T Consensus        99 ------~~~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~  142 (335)
T 3dls_A           99 ------ENQGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSA  142 (335)
T ss_dssp             ------ECSSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHH
T ss_pred             ------eeCCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHH
Confidence                  7888999999998766 99888842    2359999999999999876

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.73  E-value=1.1e-17  Score=117.00  Aligned_cols=111  Identities=24%  Similarity=0.323  Sum_probs=89.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|.+++.||+|+||.||++.+..+++.+|+|.+.........  .        .+.+|+.+++.+. ||||+++++++ 
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~--------~~~~E~~~l~~l~-h~~iv~~~~~~-   69 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP--C--------TAIREVSLLKDLK-HANIVTLHDII-   69 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------C--C--------CCCCCHHHHSCCC-CTTBCCEEEEE-
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccc--h--------hHHHHHHHHHhcC-CCCCCeeeeEE-
Confidence            5799999999999999999999889999999998643211100  0        0235888999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ...+..+++|||++ |+|.+++..   .+..+++..++.++.|++.|
T Consensus        70 -----~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~a  112 (324)
T 3mtl_A           70 -----HTEKSLTLVFEYLD-KDLKQYLDD---CGNIINMHNVKLFLFQLLRG  112 (324)
T ss_dssp             -----ECSSCEEEEEECCS-EEHHHHHHH---TTTCCCHHHHHHHHHHHHHH
T ss_pred             -----eeCCEEEEEecccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence                 67888999999996 688888853   33369999999999999876

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.73  E-value=1.1e-16  Score=110.49  Aligned_cols=111  Identities=24%  Similarity=0.349  Sum_probs=93.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+...... ..            +.+|+.++..+..|+++++++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~------------~~~e~~~~~~l~~~~~i~~~~~~   74 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-PQ------------LRDEYRTYKLLAGCTGIPNVYYF   74 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-CC------------HHHHHHHHHHTTTCTTCCCEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-HH------------HHHHHHHHHHHhcCCCCCeEEee
Confidence            457899999999999999999999889999999998643211 11            44688888888559999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ......+++|||+ +++|.++++..   +..+++..++.++.|++.|
T Consensus        75 ~------~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~  118 (298)
T 1csn_A           75 G------QEGLHNVLVIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLAR  118 (298)
T ss_dssp             E------EETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHH
T ss_pred             c------CCCceeEEEEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHH
Confidence            8      6788899999999 99999999642   3359999999999999876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.73  E-value=8.1e-17  Score=115.22  Aligned_cols=114  Identities=23%  Similarity=0.422  Sum_probs=84.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||++.+..+++.||+|.+............         ..+|+.++..+.+||||+++++++
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~---------~~~E~~~l~~l~~h~niv~l~~~~   78 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQR---------TFREIMILTELSGHENIVNLLNVL   78 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHH---------HHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHH---------HHHHHHHHHhccCCCCCCeeeeEE
Confidence            36899999999999999999999999999999998654333222222         457999999997799999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..    .....+|+||||++ |+|.++++.     ..+++..++.++.|++.|
T Consensus        79 ~~----~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~  121 (388)
T 3oz6_A           79 RA----DNDRDVYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKV  121 (388)
T ss_dssp             EC----TTSSCEEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHH
T ss_pred             ec----CCCCEEEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHH
Confidence            42    23457999999996 688888842     259999999999999876

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.73  E-value=7.5e-17  Score=116.64  Aligned_cols=115  Identities=22%  Similarity=0.336  Sum_probs=92.7

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|++.+.||+|+||.||++.+..+++.||+|.+......               ..+|+.+++.+. ||||+++++++.
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~---------------~~~E~~il~~l~-hpniv~l~~~~~  117 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---------------KNRELQIMRKLD-HCNIVRLRYFFY  117 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS---------------CCHHHHHHHTCC-CTTBCCEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh---------------HHHHHHHHHHcC-CCCccceeeEEe
Confidence            4699999999999999999999889999999998643211               226889999998 999999999886


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .........+++++|||++ +++.+++......+..+++..++.++.||++|
T Consensus       118 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  168 (420)
T 1j1b_A          118 SSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS  168 (420)
T ss_dssp             EEETTTTEEEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCcceeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence            5433234456889999996 47777776555555579999999999999876

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.73  E-value=8.7e-17  Score=114.16  Aligned_cols=117  Identities=15%  Similarity=0.193  Sum_probs=90.2

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEE-----EcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC--
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV--   87 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--   87 (152)
                      .....++|.+.+.||+|+||.||+|.     +..+++.+|+|.+....  ...            +..|..++..+..  
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~------------~~~e~~~~~~l~~~~  125 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWE------------FYIGTQLMERLKPSM  125 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHH------------HHHHHHHHHHSCGGG
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhH------------HHHHHHHHHHhhhhh
Confidence            34556789999999999999999994     56678899999987532  222            2234555544432  


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-CCCCCCHHHHHHHHHhhhcc
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+|++++++.+      ...+..|+||||+++|+|.++++.... ....+++..++.++.|+++|
T Consensus       126 ~~~iv~~~~~~------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~  184 (365)
T 3e7e_A          126 QHMFMKFYSAH------LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYM  184 (365)
T ss_dssp             GGGBCCEEEEE------ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhheee------ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHH
Confidence            89999999999      677889999999999999999976543 23469999999999999886

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.73  E-value=2.7e-17  Score=113.53  Aligned_cols=116  Identities=22%  Similarity=0.470  Sum_probs=92.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+....   ....         .+.+|+.+++.+. ||||+++++.+.
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~---------~~~~E~~~l~~l~-h~~i~~~~~~~~   72 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE---EKLS---------TILSEVMLLASLN-HQYVVRYYAAWL   72 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH---HHHH---------HHHHHHHHHTTCC-CTTBCCEEEEEE
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH---HHHH---------HHHHHHHHHHhcC-chHHHHHHHHHH
Confidence            57999999999999999999998899999999986421   1111         1557999999998 999999999875


Q ss_pred             ecC-------CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRG-------GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~-------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...       .....+..|++|||+++|+|.++++.   .+..+++..++.++.|+++|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~  128 (303)
T 1zy4_A           73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS---ENLNQQRDEYWRLFRQILEA  128 (303)
T ss_dssp             ECCCCCC------CEEEEEEEEECCCSCBHHHHHHH---SCGGGCHHHHHHHHHHHHHH
T ss_pred             hhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc---cccccchHHHHHHHHHHHHH
Confidence            321       01235789999999999999999953   23358899999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.73  E-value=7.7e-17  Score=114.44  Aligned_cols=125  Identities=13%  Similarity=0.254  Sum_probs=92.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCC-----CCeEEEEEeecCCCchhhHHHHHHHhhh---hhHHHHHHHHhccCCC
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVET-----GDHVAIKIMENIPENIEEIEEEYLVLKD---LSIEEEYLVLKDLSVH   88 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~~a~K~i~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~~~~~~~   88 (152)
                      ...++|++.+.||+|+||.||++.+..+     ++.+|+|.+.....   ....+...+..   .....|+..+..+. |
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h  107 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---PLFTELKFYQRAAKPEQIQKWIRTRKLK-Y  107 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH---HHHHHHHHHHHHCCHHHHHHHHHHTTCS-C
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch---hHHHHHHHHHhhhhhHHHHHHHHHhhcc-C
Confidence            3456899999999999999999998654     57899999875432   22223322222   23456777788888 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++....  ....+.|++|||+ |++|.+++..   .+..+++..++.++.||+.|
T Consensus       108 ~~iv~~~~~~~~~~--~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~  164 (364)
T 3op5_A          108 LGVPKYWGSGLHDK--NGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDI  164 (364)
T ss_dssp             CCSCCEEEEEEEEE--TTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHH
T ss_pred             CCCCeEEeeeeecc--CCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence            99999999985321  2236699999999 9999999953   33469999999999999876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.72  E-value=1.4e-16  Score=111.56  Aligned_cols=117  Identities=24%  Similarity=0.369  Sum_probs=91.3

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEE----cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKD----VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ....++|++++.||+|+||.||++..    ..+++.+|+|.+.....  .....         +.+|+.+++.+. ||||
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~---------~~~E~~~l~~l~-h~~i  104 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE--EHLRD---------FEREIEILKSLQ-HDNI  104 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS--HHHHH---------HHHHHHHHHTCC-CTTB
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCH--HHHHH---------HHHHHHHHHhCC-CCCe
Confidence            34566799999999999999999984    45788999999875321  11111         557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++..    .....++++|||+++++|.+++..   .+..+++..++.++.|+++|
T Consensus       105 v~~~~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~a  157 (326)
T 2w1i_A          105 VKYKGVCYS----AGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKG  157 (326)
T ss_dssp             CCEEEEECC--------CCEEEECCCTTCBHHHHHHH---STTSSCHHHHHHHHHHHHHH
T ss_pred             eeEEEEEEe----cCCCceEEEEECCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            999998832    223478999999999999999953   22359999999999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.72  E-value=8.6e-17  Score=110.77  Aligned_cols=116  Identities=24%  Similarity=0.370  Sum_probs=91.0

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +......++|++.+.||+|+||.||++.+.   ..+|+|.+............         +.+|+.+++.+. ||||+
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv   83 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQA---------FKNEVGVLRKTR-HVNIL   83 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHH---------HHHHHHHHTTCC-CTTBC
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHH---------HHHHHHHHHhCC-CCcEE
Confidence            455678889999999999999999999753   35999998754433222221         558999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++.       ..+..+++|||+++++|.+++..   ....+++..++.++.|++.|
T Consensus        84 ~~~~~~-------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~  132 (289)
T 3og7_A           84 LFMGYS-------TAPQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARG  132 (289)
T ss_dssp             CEEEEE-------CSSSCEEEEECCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHH
T ss_pred             EEEeec-------cCCccEEEEEecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHH
Confidence            999865       45668999999999999999842   23359999999999999876

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.72  E-value=1.3e-16  Score=112.50  Aligned_cols=115  Identities=16%  Similarity=0.211  Sum_probs=92.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l   94 (152)
                      ....++|++.+.||+|+||.||++.+ .+++.+|+|.+............         +.+|+.++..+..| |||+++
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~~~~~~iv~~   74 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDS---------YRNEIAYLNKLQQHSDKIIRL   74 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHH---------HHHHHHHHHHHTTTCTTBCCE
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHH---------HHHHHHHHHhhhhcCCceEEE
Confidence            34567899999999999999999987 56888999999754433222211         55799999998722 999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      ...+.+|++||+ .+|+|.+++..   . ..+++..++.++.|++.|
T Consensus        75 ~~~~------~~~~~~~lv~e~-~~~~L~~~l~~---~-~~~~~~~~~~i~~qi~~a  120 (343)
T 3dbq_A           75 YDYE------ITDQYIYMVMEC-GNIDLNSWLKK---K-KSIDPWERKSYWKNMLEA  120 (343)
T ss_dssp             EEEE------ECSSEEEEEECC-CSEEHHHHHHH---S-CCCCHHHHHHHHHHHHHH
T ss_pred             eeeE------eeCCEEEEEEeC-CCCCHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            9999      678899999994 58899999953   2 359999999999999876

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.72  E-value=2.2e-16  Score=112.41  Aligned_cols=117  Identities=23%  Similarity=0.359  Sum_probs=92.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||++++++
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpniv~~~~~   92 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR---------AYRELVLMKCVN-HKNIIGLLNV   92 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHH---------HHHHHHHHHhcC-CCCccceEEe
Confidence            357899999999999999999999999999999999754332222111         457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +...........+|+||||++ |+|.++++      ..+++..++.++.|++.|
T Consensus        93 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~a  139 (371)
T 2xrw_A           93 FTPQKSLEEFQDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCG  139 (371)
T ss_dssp             ECSCCSTTTCCEEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHH
T ss_pred             eccccccccccceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHH
Confidence            843222123347999999996 57888773      148999999999999876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=1.4e-16  Score=109.52  Aligned_cols=116  Identities=22%  Similarity=0.349  Sum_probs=91.5

Q ss_pred             cCCCCCceEEEE-EeeccceeEEEEEEEc--CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          15 LRDPRNKFKLQE-LIGEGTYGEVYWAKDV--ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~-~lg~G~~g~V~~~~~~--~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      +....++|.+.+ .||+|+||.||++.++  ..+..+|+|.+..... ......         +.+|+.++..+. ||||
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~~i   72 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEE---------MMREAQIMHQLD-NPYI   72 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHH---------HHHHHHHHHHCC-CTTB
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHH---------HHHHHHHHHhCC-CCCE
Confidence            455677898887 9999999999999864  3567799999875421 111111         557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      . .+..+++|||+++++|.+++.   ..+..+++..++.++.|+++|
T Consensus        73 ~~~~~~~------~-~~~~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~qi~~~  122 (287)
T 1u59_A           73 VRLIGVC------Q-AEALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMG  122 (287)
T ss_dssp             CCEEEEE------E-SSSEEEEEECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHH
T ss_pred             eEEEEEe------c-CCCcEEEEEeCCCCCHHHHHH---hCCccCCHHHHHHHHHHHHHH
Confidence            9999998      2 345899999999999999984   233459999999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.72  E-value=7.1e-17  Score=110.53  Aligned_cols=117  Identities=23%  Similarity=0.380  Sum_probs=91.9

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ...+....++|++.+.||+|+||.||++.+  .++.+|+|.+..... .+            .+.+|+.++..+. ||||
T Consensus        13 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~------------~~~~E~~~l~~l~-h~~i   76 (278)
T 1byg_A           13 RSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQ------------AFLAEASVMTQLR-HSNL   76 (278)
T ss_dssp             --CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC---H------------HHHHTHHHHTTCC-CTTB
T ss_pred             hccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhH-HH------------HHHHHHHHHHhCC-CCCE
Confidence            345567788999999999999999999986  478899999874321 11            1457899999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++.+.     ...+..+++|||+++|+|.+++......  .+++..++.++.|++.|
T Consensus        77 v~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~i~~~  129 (278)
T 1byg_A           77 VQLLGVIV-----EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEA  129 (278)
T ss_dssp             CCEEEEEC-----CC--CCEEEECCCTTEEHHHHHHHHHHH--HCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEEE-----cCCCceEEEEecCCCCCHHHHHHhcccc--cCCHHHHHHHHHHHHHH
Confidence            99999863     3455799999999999999999654322  38999999999999876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.71  E-value=1.8e-16  Score=109.44  Aligned_cols=114  Identities=23%  Similarity=0.403  Sum_probs=88.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCC---CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETG---DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~---~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ...|++.+.||+|+||.||++.+..++   ..+|+|.+..... ......         +.+|+.+++.+. ||||++++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~~iv~~~   92 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQ---------FLTEGIIMKDFS-HPNVLSLL   92 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHH---------HHHHHHHHHTCC-CTTBCCCC
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHH---------HHHHHHHHHhCC-CCCEeeee
Confidence            457999999999999999999875443   2478888764322 111111         557999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.     ..++..+++|||+++|+|.++++.   ....+++..++.++.|+++|
T Consensus        93 ~~~~-----~~~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~  140 (298)
T 3f66_A           93 GICL-----RSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKG  140 (298)
T ss_dssp             EEEC-----CSSSCCEEEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHH
T ss_pred             eEEE-----cCCCceEEEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHH
Confidence            9853     556789999999999999999953   33458999999999999876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.71  E-value=2e-16  Score=108.43  Aligned_cols=117  Identities=24%  Similarity=0.369  Sum_probs=91.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      .+....++|.+.+.||+|+||.||++.+...   +..+|+|.+...... ....         .+.+|+.+++.+. |||
T Consensus         6 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~---------~~~~E~~~l~~l~-h~~   74 (281)
T 3cc6_A            6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTL-DNKE---------KFMSEAVIMKNLD-HPH   74 (281)
T ss_dssp             CCSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCH-HHHH---------HHHHHHHHHHHHC-CTT
T ss_pred             cceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCc-hHHH---------HHHHHHHHHHhCC-CCC
Confidence            3456678999999999999999999986543   335899988753221 1111         1557999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      . .+..+++|||+++++|.+++...   +..+++..++.++.|+++|
T Consensus        75 i~~~~~~~------~-~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~  125 (281)
T 3cc6_A           75 IVKLIGII------E-EEPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKA  125 (281)
T ss_dssp             BCCEEEEE------C-SSSCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHH
T ss_pred             cceEEEEE------c-CCCCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHH
Confidence            99999988      3 34578999999999999999642   2358999999999999876

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.71  E-value=1.7e-16  Score=113.75  Aligned_cols=112  Identities=15%  Similarity=0.235  Sum_probs=90.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC-CCCcceeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV-HPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~l~~~   97 (152)
                      ..+|++.+.||+|+||.||++.+.. ++.+|+|.+............         +.+|+.++..+.. ||||++++++
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~---------~~~Ei~~l~~l~~~~~~iv~~~~~  124 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDS---------YRNEIAYLNKLQQHSDKIIRLYDY  124 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHH---------HHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHH---------HHHHHHHHHHcccCCCeEEEEEEE
Confidence            4569999999999999999998754 889999999764433222211         5589999999873 6999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+.+|++|| +.+++|.+++..   . ..+++..++.++.||+.|
T Consensus       125 ~------~~~~~~~lv~E-~~~~~L~~~l~~---~-~~~~~~~~~~i~~qi~~a  167 (390)
T 2zmd_A          125 E------ITDQYIYMVME-CGNIDLNSWLKK---K-KSIDPWERKSYWKNMLEA  167 (390)
T ss_dssp             E------ECSSEEEEEEE-CCSEEHHHHHHH---C-SSCCHHHHHHHHHHHHHH
T ss_pred             E------ecCCEEEEEEe-cCCCCHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            8      67788999999 568899999853   2 258999999999999876

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=2.4e-17  Score=116.78  Aligned_cols=117  Identities=19%  Similarity=0.370  Sum_probs=91.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ..++|++.+.||+|+||.||++.+.   .+++.+|+|.++...........+       .+.+|+.++..+..||||+++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~-------~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE-------HTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGG-------GCCCHHHHHHHHHTCTTBCCE
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHH-------HHHHHHHHHHHccCCCceeEE
Confidence            4478999999999999999999984   478899999986432111000000       033578888888459999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+      ...+.+++||||+++|+|.+++...    ..+++..++.++.|+++|
T Consensus       125 ~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~a  171 (355)
T 1vzo_A          125 HYAF------QTETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLA  171 (355)
T ss_dssp             EEEE------EETTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHH
T ss_pred             EEEE------eeCceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHH
Confidence            9999      6778899999999999999999532    259999999999999876

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.71  E-value=2.6e-16  Score=118.65  Aligned_cols=115  Identities=23%  Similarity=0.360  Sum_probs=90.1

Q ss_pred             CCCCCceEEEE-EeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQE-LIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~-~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ....+++.+.+ .||+|+||.||++.++.  .+..||+|.++...... ....         +.+|+.+++.+. ||||+
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~-~~~~---------~~~E~~il~~l~-hpniv  399 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEE---------MMREAQIMHQLD-NPYIV  399 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST-THHH---------HHHHHHHHTTCC-CTTBC
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH-HHHH---------HHHHHHHHHhCC-CCCEe
Confidence            34566777777 89999999999998753  45569999987542211 1111         557999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      .. +.+++||||+++|+|.+++..   .+..+++..++.++.||++|
T Consensus       400 ~l~~~~------~~-~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~  448 (613)
T 2ozo_A          400 RLIGVC------QA-EALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMG  448 (613)
T ss_dssp             CEEEEE------ES-SSEEEEEECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHH
T ss_pred             eEEEEe------cc-CCeEEEEEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHH
Confidence            999998      33 569999999999999999842   23469999999999999876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.71  E-value=5.8e-17  Score=114.30  Aligned_cols=127  Identities=18%  Similarity=0.214  Sum_probs=89.7

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcC---CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVE---TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...++|.+.+.||+|+||.||++.+..   ++..+|+|.+.....................+.+|+..+..+. ||||++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~  112 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPL  112 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCcce
Confidence            345789999999999999999999876   6778999998754322111111111222223567889999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+....  ......|++|||+ +++|.+++....    .+++..++.++.|++.|
T Consensus       113 ~~~~~~~~~--~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~a  163 (345)
T 2v62_A          113 FYGSGLTEF--KGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDV  163 (345)
T ss_dssp             EEEEEEEES--SSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHH
T ss_pred             eeccccccc--CCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHH
Confidence            999984321  2367899999999 999999985322    59999999999999876

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.71  E-value=7.9e-17  Score=113.74  Aligned_cols=121  Identities=21%  Similarity=0.324  Sum_probs=91.6

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~   83 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---------ALREIKILQLLK-HENVVNLIE   83 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHH---------HHHHHHHHHhcc-CCCcccHhh
Confidence            3457899999999999999999999999999999998654322211111         447999999998 999999999


Q ss_pred             eeeecCC--CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGG--QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~--~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.....  ....+.+|+||||++ |+|.+.+.   .....+++..++.++.|++.|
T Consensus        84 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~i~~qi~~~  136 (351)
T 3mi9_A           84 ICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLS---NVLVKFTLSEIKRVMQMLLNG  136 (351)
T ss_dssp             EEEEC--------CEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHH
T ss_pred             eeeccccccccCCceEEEEEeccC-CCHHHHHh---hccCCCCHHHHHHHHHHHHHH
Confidence            9853210  011567999999996 47777774   222359999999999999876

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.71  E-value=7.1e-17  Score=112.99  Aligned_cols=114  Identities=20%  Similarity=0.319  Sum_probs=89.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCe----EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDH----VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~----~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|++.+.||+|+||.||++.+..++..    +++|.+...... .....         +.+|+.++..+. ||||+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-~~~~~---------~~~e~~~l~~l~-h~~iv   78 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQA---------VTDHMLAIGSLD-HAHIV   78 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC-SCBCS---------CCHHHHHHHTCC-CTTBC
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH-HHHHH---------HHHHHHHHhcCC-CCCcC
Confidence            4567899999999999999999998877765    666766432211 11111         346888899998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      . .+..+++|||+++|+|.+++...   +..+++..++.++.|+++|
T Consensus        79 ~~~~~~------~-~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~  127 (325)
T 3kex_A           79 RLLGLC------P-GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKG  127 (325)
T ss_dssp             CEEEEE------C-BSSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHH
T ss_pred             eEEEEE------c-CCccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHH
Confidence            999988      3 56699999999999999998532   2358999999999999876

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.71  E-value=2e-16  Score=110.66  Aligned_cols=108  Identities=23%  Similarity=0.453  Sum_probs=90.8

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+....  .+.            +.+|+.++..+.+||||+++++++
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~------------~~~E~~~l~~l~~~~~i~~~~~~~  100 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKK------------IKREIKILENLRGGPNIITLADIV  100 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHH------------HHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHH------------HHHHHHHHHHcCCCCCEEEeeeee
Confidence            468999999999999999999999999999999986422  111            447889999987799999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..    ......+++|||+++++|.++++       .+++..++.++.|++.|
T Consensus       101 ~~----~~~~~~~lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~  142 (330)
T 3nsz_A          101 KD----PVSRTPALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKA  142 (330)
T ss_dssp             EC----TTTCCEEEEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHH
T ss_pred             cc----CCCCceEEEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHH
Confidence            42    22677999999999999988873       38999999999999876

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=6.3e-17  Score=114.18  Aligned_cols=117  Identities=21%  Similarity=0.346  Sum_probs=86.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+........... .     ...+.+|+.+++.+. ||||++++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~-~-----~~~~~~E~~~l~~l~-h~~iv~~~~~   80 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDG-I-----NRTALREIKLLQELS-HPNIIGLLDA   80 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------------CTHHHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhh-h-----hHHHHHHHHHHhhCC-CCCCCeEEEE
Confidence            45689999999999999999999988999999999874322111000 0     001457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+++ +|.+++.   .....+++..++.++.|+++|
T Consensus        81 ~------~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~~~~qi~~~  124 (346)
T 1ua2_A           81 F------GHKSNISLVFDFMET-DLEVIIK---DNSLVLTPSHIKAYMLMTLQG  124 (346)
T ss_dssp             E------CCTTCCEEEEECCSE-EHHHHHT---TCCSSCCSSHHHHHHHHHHHH
T ss_pred             E------eeCCceEEEEEcCCC-CHHHHHH---hcCcCCCHHHHHHHHHHHHHH
Confidence            9      778889999999975 8888774   333469999999999999876

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.70  E-value=4.9e-16  Score=110.33  Aligned_cols=121  Identities=24%  Similarity=0.308  Sum_probs=93.9

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      +......++|++++.||+|+||.||++.+..++..+|+|.+..... ......         +.+|+.++..+. ||||+
T Consensus        20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~niv   88 (364)
T 3qyz_A           20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQR---------TLREIKILLRFR-HENII   88 (364)
T ss_dssp             -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHH---------HHHHHHHHHHCC-CTTBC
T ss_pred             cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHH---------HHHHHHHHHhcC-CCCCc
Confidence            3445566799999999999999999999988999999999874321 111111         457999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++..... ......|++|||++ |+|.++++.   .  .+++..++.++.|++.|
T Consensus        89 ~~~~~~~~~~~-~~~~~~~iv~e~~~-~~L~~~l~~---~--~~~~~~~~~i~~qi~~a  140 (364)
T 3qyz_A           89 GINDIIRAPTI-EQMKDVYIVQDLME-TDLYKLLKT---Q--HLSNDHICYFLYQILRG  140 (364)
T ss_dssp             CCCEEECCSST-TTCCCEEEEEECCS-EEHHHHHHH---C--CCCHHHHHHHHHHHHHH
T ss_pred             cceeEEecCCc-cccceEEEEEcccC-cCHHHHHHh---C--CCCHHHHHHHHHHHHHH
Confidence            99999843221 22357999999996 689888842   2  49999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.70  E-value=3.5e-16  Score=109.39  Aligned_cols=120  Identities=23%  Similarity=0.316  Sum_probs=92.6

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHH-HHhccCCCCCcc
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL-VLKDLSVHPNIP   92 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~   92 (152)
                      .+....++|++.+.||+|+||.||++.+..+++.+|+|.+........ ...         +..|.. +++.+. ||||+
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~---------~~~e~~~~~~~~~-h~niv   84 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE-QKQ---------LLMDLDVVMRSSD-CPYIV   84 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHH-HHH---------HHHHHHHHHSSCC-CTTBC
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchH-HHH---------HHHHHHHHHHcCC-CCcEe
Confidence            456677899999999999999999999988999999999975432211 111         234555 556666 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-CCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      ..++..+++|||++ |+|.+++..... ....+++..++.++.|++.|
T Consensus        85 ~~~~~~------~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~  137 (327)
T 3aln_A           85 QFYGAL------FREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKA  137 (327)
T ss_dssp             CEEEEE------ECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred             eeeeEE------EeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHH
Confidence            999999      67788999999996 588888864332 24469999999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.70  E-value=2.1e-16  Score=110.73  Aligned_cols=113  Identities=19%  Similarity=0.334  Sum_probs=84.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeE----EEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHV----AIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~----a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|++.+.||+|+||.||++.+..++..+    |+|.+......  ....        .+.+|+.+++.+. ||||++
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~--------~~~~E~~~l~~l~-h~~iv~   81 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANK--------EILDEAYVMASVD-NPHVCR   81 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHH--------HHHHHHHHHHHCC-BTTBCC
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCH--HHHH--------HHHHHHHHHHhCC-CCCEeE
Confidence            4578999999999999999999987776654    66666432111  1111        1557999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      .. +..++++||+.+|+|.+++..   .+..+++..++.++.|+++|
T Consensus        82 ~~~~~------~~-~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~  129 (327)
T 3poz_A           82 LLGIC------LT-STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKG  129 (327)
T ss_dssp             EEEEE------ES-SSEEEEEECCTTCBHHHHHHH---STTSCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------ec-CCeEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            99998      33 348899999999999999853   23359999999999999876

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.70  E-value=4.4e-16  Score=108.94  Aligned_cols=124  Identities=28%  Similarity=0.460  Sum_probs=96.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +.....+|++.+.||+|+||.||++.+..+++.+|+|.+.....  .....         +.+|+.++..+.+||||+++
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~---------~~~e~~~l~~l~~h~~iv~~   91 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE--EKNRA---------IIQEVCFMKKLSGHPNIVQF   91 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSH--HHHHH---------HHHHHHHHHHHTTSTTBCCE
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCch--HHHHH---------HHHHHHHHHHhccCCChhhc
Confidence            34455689999999999999999999988999999999864321  11111         45788889888669999999


Q ss_pred             eeeeeecC--CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRG--GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~--~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++....  .......++++|||+. |+|.+++......+ .+++..++.++.|++.|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~-~~~~~~~~~i~~qi~~~  148 (337)
T 3ll6_A           92 CSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRG-PLSCDTVLKIFYQTCRA  148 (337)
T ss_dssp             EEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTC-SCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccC-CCCHHHHHHHHHHHHHH
Confidence            98874321  1134566999999995 79999997644433 59999999999999876

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.70  E-value=2.7e-16  Score=109.37  Aligned_cols=123  Identities=15%  Similarity=0.228  Sum_probs=95.1

Q ss_pred             ccccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812           8 RHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..+.+.......++|++.+.||+|+||.||++.+. +++.+|+|.+............         +.+|+.++..+..
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~---------~~~E~~~l~~l~~   85 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDS---------YRNEIAYLNKLQQ   85 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHH---------HHHHHHHHHHHGG
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHH---------HHHHHHHHHhccc
Confidence            34445556667788999999999999999999874 5888999999754333222211         5578899988873


Q ss_pred             -CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          88 -HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        88 -~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ||||+++++++      ...+.++++|| +.+++|.+++..   . ..+++..++.++.|+++|
T Consensus        86 ~~~~iv~~~~~~------~~~~~~~lv~e-~~~~~L~~~l~~---~-~~~~~~~~~~i~~qi~~a  139 (313)
T 3cek_A           86 HSDKIIRLYDYE------ITDQYIYMVME-CGNIDLNSWLKK---K-KSIDPWERKSYWKNMLEA  139 (313)
T ss_dssp             GCTTBCCEEEEE------ECSSEEEEEEC-CCSEEHHHHHHH---C-SSCCHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEEe------ecCCEEEEEEe-cCCCcHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence             59999999998      67888999999 558899999853   2 358999999999999876

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.69  E-value=2.9e-16  Score=109.56  Aligned_cols=112  Identities=23%  Similarity=0.272  Sum_probs=88.2

Q ss_pred             CceEEEEEeeccceeEEEEEEEc----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDV----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..|++++.||+|+||.||++...    .+++.+|+|.+..... ......         +.+|+.+++.+. ||||++++
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~~iv~~~   99 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSG---------WKQEIDILRTLY-HEHIIKYK   99 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHH---------HHHHHHHHHHCC-CTTBCCEE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHH---------HHHHHHHHHhCC-CcchhhEE
Confidence            33599999999999999888643    4678899999975422 111111         558999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++..    .....++++|||+++|+|.+++.   ..  .+++..++.++.|++.|
T Consensus       100 ~~~~~----~~~~~~~lv~e~~~~~~L~~~l~---~~--~~~~~~~~~i~~~l~~~  146 (318)
T 3lxp_A          100 GCCED----AGAASLQLVMEYVPLGSLRDYLP---RH--SIGLAQLLLFAQQICEG  146 (318)
T ss_dssp             EEEEE----TTTTEEEEEECCCTTCBHHHHGG---GS--CCCHHHHHHHHHHHHHH
T ss_pred             EEEec----CCCceEEEEEecccCCcHHHHHh---hC--CCCHHHHHHHHHHHHHH
Confidence            99853    23578999999999999999984   22  39999999999999876

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=5.8e-16  Score=106.79  Aligned_cols=112  Identities=21%  Similarity=0.405  Sum_probs=86.5

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      .|.+.+.||+|+||.||++.+..++.   .+|+|.+..... ......         +.+|+.+++.+. ||||++++++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~   90 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEA---------FLREGLLMRGLN-HPNVLALIGI   90 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHH---------HHHHHHHHHTCC-CTTBCCCCEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHH---------HHHHHHHHHhCC-CCCeeeEEEE
Confidence            46677999999999999998765544   689998864322 111111         557999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.     ......+++|||+.+|+|.+++..   .+..+++..++.++.|+++|
T Consensus        91 ~~-----~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~  136 (298)
T 3pls_A           91 ML-----PPEGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARG  136 (298)
T ss_dssp             EC-----CSSSCCEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHH
T ss_pred             Ee-----cCCCCcEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHH
Confidence            83     233445999999999999999953   23468999999999999876

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.69  E-value=5.5e-16  Score=108.67  Aligned_cols=114  Identities=19%  Similarity=0.311  Sum_probs=89.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeE----EEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHV----AIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~----a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|++.+.||+|+||.||++.+..++..+    ++|.+....... ....         +.+|+.++..+. ||||+
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~-~~~~---------~~~E~~~l~~l~-hp~iv   80 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKE---------ILDEAYVMASVD-NPHVC   80 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCC-CHHH---------HHHHHHHHTTCC-BTTBC
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHH-HHHH---------HHHHHHHHHhCC-CCCee
Confidence            34678999999999999999999988777655    666654322111 1111         457999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      .. +..+++++++.+|+|.+++..   .+..+++..++.++.|++.|
T Consensus        81 ~~~~~~------~~-~~~~~v~~~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~a  129 (327)
T 3lzb_A           81 RLLGIC------LT-STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKG  129 (327)
T ss_dssp             CCCEEE------ES-SSEEEEECCCSSCBHHHHHHH---TTTCCCHHHHHHHHHHHHHH
T ss_pred             EEEEEE------ec-CCceEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHH
Confidence            999998      33 348899999999999999953   23359999999999999876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.69  E-value=1.7e-16  Score=111.69  Aligned_cols=115  Identities=20%  Similarity=0.294  Sum_probs=86.8

Q ss_pred             CCCCCceEEEE-EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHH-HHhccCCCCCcce
Q psy2812          16 RDPRNKFKLQE-LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL-VLKDLSVHPNIPS   93 (152)
Q Consensus        16 ~~~~~~~~~~~-~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~   93 (152)
                      ....++|.+.+ .||+|+||.||++.++.+++.+|+|.+....    ...            .|.. .+..+. |||+++
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~------------~e~~~~~~~~~-h~~i~~   86 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KAR------------QEVDHHWQASG-GPHIVC   86 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHH------------HHHHHHHHHTT-STTBCC
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHH------------HHHHHHHHhcC-CCChHH
Confidence            34567899965 6999999999999999999999999986421    111            1222 233444 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++....  .....++++|||++||+|.+++...  .+..+++..++.++.|++.|
T Consensus        87 ~~~~~~~~~--~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~  140 (336)
T 3fhr_A           87 ILDVYENMH--HGKRCLLIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTA  140 (336)
T ss_dssp             EEEEEEEEE--TTEEEEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcc--CCCceEEEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHH
Confidence            999884321  2356699999999999999999642  22359999999999999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.69  E-value=3.6e-16  Score=118.29  Aligned_cols=114  Identities=21%  Similarity=0.310  Sum_probs=87.5

Q ss_pred             CCCCceEEEE-EeeccceeEEEEEEEc--CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQE-LIGEGTYGEVYWAKDV--ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~-~lg~G~~g~V~~~~~~--~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...+.+.+.. .||+|+||.||++.+.  ..+..+|+|.++......... ..        +.+|+.++..++ ||||++
T Consensus       365 ~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~-~~--------~~~E~~il~~l~-hpnIv~  434 (635)
T 4fl3_A          365 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK-DE--------LLAEANVMQQLD-NPYIVR  434 (635)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGH-HH--------HHHHHHHHHHCC-CTTBCC
T ss_pred             ccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHH-HH--------HHHHHHHHHhCC-CCCEee
Confidence            3444555544 7999999999999653  456789999987532221111 11        558999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      + .+..++||||+++|+|.++++.    +..+++..++.++.||+.|
T Consensus       435 l~~~~------~-~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~  481 (635)
T 4fl3_A          435 MIGIC------E-AESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMG  481 (635)
T ss_dssp             EEEEE------E-SSSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------e-cCCEEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHH
Confidence            99988      3 3458999999999999999952    2359999999999999876

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.69  E-value=7.4e-17  Score=111.67  Aligned_cols=118  Identities=22%  Similarity=0.356  Sum_probs=89.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..++..+|+|.+........  .....     .+.+|+.+++.+. ||||+++++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--~~~~~-----~~~~E~~~l~~l~-h~~i~~~~~~~   75 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI--PNGEA-----NVKKEIQLLRRLR-HKNVIQLVDVL   75 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS--TTHHH-----HHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc--chhHH-----HHHHHHHHHHhcC-CCCeeEEEEEE
Confidence            4689999999999999999999988999999999874211100  00001     1568999999998 99999999987


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..    ......+++|||++++ |.+++....  ...+++..++.++.|+++|
T Consensus        76 ~~----~~~~~~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~a  121 (305)
T 2wtk_C           76 YN----EEKQKMYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDG  121 (305)
T ss_dssp             EC----C---CEEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHH
T ss_pred             Ec----CCCCeEEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHH
Confidence            43    3456799999999766 777775433  2359999999999999876

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.69  E-value=1e-16  Score=114.38  Aligned_cols=127  Identities=11%  Similarity=0.103  Sum_probs=85.9

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHH---HhccCCCCCc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV---LKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~~~~~~i   91 (152)
                      +..+.++|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|+.+   ++.+. ||||
T Consensus        68 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~E~~~l~~l~~l~-hpni  138 (377)
T 3byv_A           68 LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ--------MKEEVLRLRLLRGIK-NQKQ  138 (377)
T ss_dssp             SSCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHH--------HHHHHHGGGGSTTCC-SHHH
T ss_pred             cCCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHH--------HHHHHHHHHhccccC-CHHH
Confidence            3455688999999999999999999988889999999997543222211111        4578844   44555 9999


Q ss_pred             ceeeeeeeecC-CCCCCc-----------------eEEEEEcccCCCChHHHHHHhhhCC---CCCCHHHHHHHHHhhhc
Q psy2812          92 PSFYGLYLRRG-GQPEED-----------------QLWFVMELCTGGSVTDLVQGMKKRG---VSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        92 ~~l~~~~~~~~-~~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~---~~l~~~~~~~~~~qi~~  150 (152)
                      +++++.+.... ..+.++                 ..|++|||+ +|+|.+++.......   ..+++..++.++.||++
T Consensus       139 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~  217 (377)
T 3byv_A          139 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIR  217 (377)
T ss_dssp             HHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHH
Confidence            99983331100 002221                 389999999 689999997543211   12335888889999987


Q ss_pred             c
Q psy2812         151 V  151 (152)
Q Consensus       151 a  151 (152)
                      |
T Consensus       218 a  218 (377)
T 3byv_A          218 L  218 (377)
T ss_dssp             H
T ss_pred             H
Confidence            6

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.69  E-value=1.7e-16  Score=113.01  Aligned_cols=118  Identities=22%  Similarity=0.414  Sum_probs=86.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||++++++
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-hpnIv~~~~~   96 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---------TYRELRLLKHMK-HENVIGLLDV   96 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEE
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHH---------HHHHHHHHHhCC-CCCCCcEEEE
Confidence            457899999999999999999999999999999998754322221111         457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +...........+|+++|++ +++|.++++.     ..+++..++.++.||++|
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~a  144 (367)
T 2fst_X           97 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRG  144 (367)
T ss_dssp             ECSCSSGGGCCCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHH
T ss_pred             EecCCccccCCeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHH
Confidence            84321112236689999999 7899998842     259999999999999876

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=3.3e-16  Score=111.73  Aligned_cols=113  Identities=22%  Similarity=0.389  Sum_probs=88.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCC---CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETG---DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~---~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..|++.+.||+|+||.||++.....+   ..+|+|.+...... .....         +.+|+.+++.+. ||||+++++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~---------~~~E~~il~~l~-hpnIv~~~~  157 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDI-GEVSQ---------FLTEGIIMKDFS-HPNVLSLLG  157 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCS-HHHHH---------HHHHHTTSTTCC-CTTBCCCCE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCH-HHHHH---------HHHHHHHHHhCC-CCCcceEEE
Confidence            45888999999999999999875433   35788887643221 11111         557999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.     ..++..+++|||+++|+|.++++   ..+..+++..++.++.|+++|
T Consensus       158 ~~~-----~~~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~qi~~a  204 (373)
T 3c1x_A          158 ICL-----RSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKG  204 (373)
T ss_dssp             EEC-----CCSSCCEEEEECCTTCBHHHHHH---CTTCCCBHHHHHHHHHHHHHH
T ss_pred             EEE-----cCCCCeEEEEECCCCCCHHHHHh---hcccCCCHHHHHHHHHHHHHH
Confidence            863     45667899999999999999995   233358999999999999876

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.69  E-value=9.4e-17  Score=111.59  Aligned_cols=120  Identities=18%  Similarity=0.255  Sum_probs=85.6

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc----CCCCCc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL----SVHPNI   91 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~i   91 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+...............     .+.+|+.++..+    . ||||
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~-----~~~~e~~~l~~l~~~~~-h~~i  100 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSV-----TCPLEVALLWKVGAGGG-HPGV  100 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------C-----CCCHHHHHHHHHHSSCC-CSSB
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhH-----HHHHHHHHHHhhcccCC-CCCe
Confidence            34467899999999999999999999889999999999754322111111110     134678888777    6 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcc-cCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMEL-CTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+..+++||+ +.+++|.+++..  .  ..+++..++.++.|+++|
T Consensus       101 ~~~~~~~------~~~~~~~~v~e~~~~~~~L~~~l~~--~--~~~~~~~~~~~~~qi~~~  151 (312)
T 2iwi_A          101 IRLLDWF------ETQEGFMLVLERPLPAQDLFDYITE--K--GPLGEGPSRCFFGQVVAA  151 (312)
T ss_dssp             CCEEEEC-----------CEEEEECCSSEEEHHHHHHH--H--CSCCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------ecCCeEEEEEEecCCCCCHHHHHHh--c--CCCCHHHHHHHHHHHHHH
Confidence            9999999      677889999999 789999999954  2  249999999999999876

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.68  E-value=4.2e-17  Score=114.87  Aligned_cols=125  Identities=12%  Similarity=0.178  Sum_probs=92.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHH-----HH-HHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEE-----EY-LVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~-----~~-~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      ..++|.+.+.||+|+||.||++.+  ++..+|+|.+............     .. .......+.+|+.++..+. ||||
T Consensus        29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i  105 (348)
T 2pml_X           29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYC  105 (348)
T ss_dssp             EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTTB
T ss_pred             ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCCc
Confidence            356899999999999999999998  8899999998743211100000     00 0000011568999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHH----hhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG----MKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      ...+..+++|||+++|+|.++++.    .......+++..++.++.|++.|
T Consensus       106 ~~~~~~~------~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~  163 (348)
T 2pml_X          106 LTCEGII------TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNS  163 (348)
T ss_dssp             CCCSEEE------ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred             ceEEEEE------eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHH
Confidence            9999999      677899999999999999998321    11113469999999999999876

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.68  E-value=1.4e-15  Score=107.23  Aligned_cols=118  Identities=27%  Similarity=0.439  Sum_probs=92.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|++.+.||+|+||.||++.+..+++.+|+|.+.....  .....        .+.+|+.+++.+. ||||++++
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~--------~~~~E~~~l~~l~-h~~iv~~~   75 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFAL--------RTLREIKILKHFK-HENIITIF   75 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS--HHHHH--------HHHHHHHHHHHCC-CTTBCCEE
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc--chHHH--------HHHHHHHHHHhCc-CCCcCCee
Confidence            3456899999999999999999999988999999999864321  11111        1457999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++..... ......+++|||+. |+|.+++..     ..+++..++.++.|++.|
T Consensus        76 ~~~~~~~~-~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~  124 (353)
T 2b9h_A           76 NIQRPDSF-ENFNEVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRA  124 (353)
T ss_dssp             EECCCSCS-TTCCCEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHH
T ss_pred             eeeccccc-CccceEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHH
Confidence            98732111 23477999999996 688888842     259999999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.68  E-value=1.1e-16  Score=111.02  Aligned_cols=111  Identities=23%  Similarity=0.330  Sum_probs=88.3

Q ss_pred             EEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc-hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeec
Q psy2812          23 KLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRR  101 (152)
Q Consensus        23 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~  101 (152)
                      ...+.||+|+||.||++..  +++.+|+|.+...... .......        +.+|+.+++.+. ||||+++++++   
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~--------~~~E~~~l~~l~-h~~i~~~~~~~---   99 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQ--------FDQEIKVMAKCQ-HENLVELLGFS---   99 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHH--------HHHHHHHHHHCC-CTTBCCEEEEE---
T ss_pred             ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHH--------HHHHHHHHHhcC-CCCeEEEEEEE---
Confidence            3347899999999999975  6788999998753321 1111111        557999999998 99999999999   


Q ss_pred             CCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         102 GGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                         ...+..+++|||+++|+|.+++..... ...+++..++.++.|++.|
T Consensus       100 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~  145 (307)
T 2nru_A          100 ---SDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANG  145 (307)
T ss_dssp             ---CSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHH
T ss_pred             ---ecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHH
Confidence               677889999999999999999965433 3369999999999999876

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.68  E-value=1.6e-16  Score=109.38  Aligned_cols=108  Identities=26%  Similarity=0.421  Sum_probs=87.3

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~  104 (152)
                      ...||+|+||.||++.+..++..+|+|.+........  ..         +.+|+.+++.+. ||||+++++.+      
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~---------~~~e~~~l~~l~-h~~iv~~~~~~------   88 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QP---------LHEEIALHKHLK-HKNIVQYLGSF------   88 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HH---------HHHHHHHHHTCC-CTTBCCEEEEE------
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH--HH---------HHHHHHHHHhCC-CCCEeeEeeEE------
Confidence            3489999999999999989999999999875422111  11         457999999998 99999999999      


Q ss_pred             CCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         105 PEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+..+++|||+++++|.+++.... ....+++..++.++.|++.|
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~  134 (295)
T 2clq_A           89 SENGFIKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEG  134 (295)
T ss_dssp             EETTEEEEEEECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHH
T ss_pred             EeCCcEEEEEEeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHH
Confidence            66788999999999999999996432 22347799999999999876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.68  E-value=7.1e-16  Score=109.80  Aligned_cols=117  Identities=21%  Similarity=0.370  Sum_probs=89.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||++++++
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~niv~~~~~  109 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR---------AYRELLLLKHMQ-HENVIGLLDV  109 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEE
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHH---------HHHHHHHHHhcC-CCCchhhhhh
Confidence            346899999999999999999999999999999999754332221111         457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +............|++|||+. ++|.+++.      ..+++..++.++.|++.|
T Consensus       110 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~a  156 (371)
T 4exu_A          110 FTPASSLRNFYDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKG  156 (371)
T ss_dssp             ECSCSSSTTCCCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHH
T ss_pred             eeccCCcccceeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHH
Confidence            943211111123499999996 67777662      249999999999999876

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.68  E-value=8.5e-16  Score=116.64  Aligned_cols=116  Identities=28%  Similarity=0.502  Sum_probs=91.1

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCC---CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVET---GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      .....++|++.+.||+|+||.||++.+..+   +..+|+|.+.....  .....        .+.+|+.+++.+. ||||
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~--~~~~~--------~~~~E~~~l~~l~-HpnI  453 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--DSVRE--------KFLQEALTMRQFD-HPHI  453 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC--HHHHH--------HHHHHHHHHHHCC-CTTB
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC--HHHHH--------HHHHHHHHHHhCC-CCCC
Confidence            345567899999999999999999998654   34688888764321  11111        1557999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      . ++..|+||||+++|+|.++++.   .+..+++..++.++.|+++|
T Consensus       454 v~l~~~~------~-~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~a  503 (656)
T 2j0j_A          454 VKLIGVI------T-ENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQLSTA  503 (656)
T ss_dssp             CCEEEEE------C-SSSCEEEEECCTTCBHHHHHHH---TTTTCCHHHHHHHHHHHHHH
T ss_pred             CeEEEEE------e-cCceEEEEEcCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHH
Confidence            9999988      3 4568999999999999999953   23358999999999999876

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.68  E-value=5.5e-16  Score=109.81  Aligned_cols=128  Identities=23%  Similarity=0.399  Sum_probs=93.7

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhH--HHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI--EEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~--~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      .....++|.+.+.||+|+||.||++.+.. +..+|+|.+..........  ....  .....+.+|+.+++.+. ||||+
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv   92 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDS--FLCKRVLREIRLLNHFH-HPNIL   92 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSH--HHHHHHHHHHHHHHHCC-CTTBC
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhh--hHHHHHHHHHHHHHhCC-CcCcc
Confidence            34566889999999999999999998744 8899999986432221100  0000  00011568999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++..... .....+|++|||++ |+|.+++.   ..+..+++..++.++.|++.|
T Consensus        93 ~~~~~~~~~~~-~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~~~~qi~~~  146 (362)
T 3pg1_A           93 GLRDIFVHFEE-PAMHKLYLVTELMR-TDLAQVIH---DQRIVISPQHIQYFMYHILLG  146 (362)
T ss_dssp             CCSEEEEECCT-TTCCEEEEEEECCS-EEHHHHHH---CTTSCCCHHHHHHHHHHHHHH
T ss_pred             ceeeeEEeccC-CCcceEEEEEccCC-CCHHHHHH---hcccCCCHHHHHHHHHHHHHH
Confidence            99999864332 24457999999996 68888874   333469999999999999876

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.67  E-value=1.1e-15  Score=110.83  Aligned_cols=112  Identities=21%  Similarity=0.306  Sum_probs=87.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-----CCCCcce
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-----VHPNIPS   93 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~   93 (152)
                      ..+|++.+.||+|+||.||++.+..+++.||+|.+.........            +..|+.++..+.     +|+||++
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~------------~~~E~~~l~~l~~~~~~~~~~iv~  163 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ------------AAEEIRILEHLRKQDKDNTMNVIH  163 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHH------------HHHHHHHHHHHHTTCTTSCSCBCC
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHH------------HHHHHHHHHHHhhccccCCcCEEE
Confidence            45799999999999999999999999999999998743211111            234555555542     2789999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      ...+.++++|||+. ++|.+++.....  ..+++..++.++.||+.|
T Consensus       164 ~~~~~------~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~a  212 (429)
T 3kvw_A          164 MLENF------TFRNHICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQC  212 (429)
T ss_dssp             EEEEE------EETTEEEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHH
T ss_pred             EEeec------ccCCeEEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHH
Confidence            99999      67789999999995 799999864322  349999999999999876

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.67  E-value=3.2e-16  Score=108.89  Aligned_cols=110  Identities=26%  Similarity=0.362  Sum_probs=87.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++.+.||+|+||.||++.+  .++.+|+|.+....    .. .        .+.+|+.+++.+. ||||+++++
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~----~~-~--------~~~~E~~~l~~l~-hp~iv~~~~   68 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESES----ER-K--------AFIVELRQLSRVN-HPNIVKLYG   68 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTT----HH-H--------HHHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChh----HH-H--------HHHHHHHHHhcCC-CCCcCeEEE
Confidence            3457899999999999999999986  46789999886321    11 1        1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+      .  +..+++|||+++|+|.+++..... ...+++..++.++.|+++|
T Consensus        69 ~~------~--~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~  114 (307)
T 2eva_A           69 AC------L--NPVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQG  114 (307)
T ss_dssp             BC------T--TTTEEEEECCTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHH
T ss_pred             EE------c--CCcEEEEEcCCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHH
Confidence            88      4  348999999999999999953221 1247899999999998876

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.67  E-value=2.2e-16  Score=109.60  Aligned_cols=122  Identities=20%  Similarity=0.276  Sum_probs=85.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchh--hHHHHHHHhhhhhHHHHHHHHhccC--CCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE--EIEEEYLVLKDLSIEEEYLVLKDLS--VHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~--~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~   93 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+........  .....        ..+|+.+++.+.  .||||++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--------~~~e~~~l~~l~~~~h~niv~   78 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS--------TVREVALLRRLEAFEHPNVVR   78 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHH--------HHHHHHHHHHHHHHCCTTBCC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchh--------HHHHHHHHHHHhhcCCCCeEE
Confidence            45789999999999999999999989999999999874321110  00000        224555544432  2999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++..... .....++++|||+. |+|.+++....  ...+++..++.++.|+++|
T Consensus        79 ~~~~~~~~~~-~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~a  132 (308)
T 3g33_A           79 LMDVCATSRT-DREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRG  132 (308)
T ss_dssp             EEEEEEECCS-SSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHH
T ss_pred             eeeeeeccCC-CCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHH
Confidence            9999854221 12236899999995 69999986422  2249999999999999876

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.67  E-value=6.3e-16  Score=106.72  Aligned_cols=111  Identities=25%  Similarity=0.355  Sum_probs=86.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhc--cCCCCCccee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD--LSVHPNIPSF   94 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~i~~l   94 (152)
                      ...++|++.+.||+|+||.||++.+  +++.+|+|.+....  ...            ...|..++..  +. ||||+++
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~------------~~~e~~~~~~~~l~-h~niv~~   67 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKS------------WFRETELYNTVMLR-HENILGF   67 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHH------------HHHHHHHHHHTCCC-CTTBCCE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chh------------hHHHHHHHHHhhcc-CcCeeeE
Confidence            3567899999999999999999986  68889999986421  111            2234444444  66 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+....  .....++++|||+++|+|.++++   .  ..+++..++.++.|+++|
T Consensus        68 ~~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~---~--~~~~~~~~~~i~~~i~~~  117 (301)
T 3q4u_A           68 IASDMTSR--HSSTQLWLITHYHEMGSLYDYLQ---L--TTLDTVSCLRIVLSIASG  117 (301)
T ss_dssp             EEEEEEEE--TTEEEEEEEECCCTTCBHHHHHT---T--CCBCHHHHHHHHHHHHHH
T ss_pred             EEeecccc--CCCceeEEehhhccCCCHHHHHh---h--cccCHHHHHHHHHHHHHH
Confidence            99865422  34577999999999999999993   2  259999999999999876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.67  E-value=1.2e-15  Score=106.13  Aligned_cols=118  Identities=21%  Similarity=0.312  Sum_probs=83.9

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ......++|++.+.||+|+||.||++.+..+++.+|+|.+......... .. .       +..+..+++.+. ||||++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-~~-~-------~~~~~~~~~~~~-h~~i~~   88 (318)
T 2dyl_A           19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN-KR-I-------LMDLDVVLKSHD-CPYIVQ   88 (318)
T ss_dssp             EEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHH-HH-H-------HHHHHHHHHTTT-CTTBCC
T ss_pred             hhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHH-HH-H-------HHHHHHHHHhcC-CCceee
Confidence            3455667999999999999999999999889999999999754322111 11 1       223445566676 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ...+.++++|||+ ++.+..+...   ....+++..++.++.|+++|
T Consensus        89 ~~~~~------~~~~~~~lv~e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~  136 (318)
T 2dyl_A           89 CFGTF------ITNTDVFIAMELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKA  136 (318)
T ss_dssp             EEEEE------ECSSEEEEEECCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEE------ecCCcEEEEEecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHH
Confidence            99999      6778999999999 5555555532   12359999999999999876

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.67  E-value=3.1e-17  Score=114.24  Aligned_cols=121  Identities=22%  Similarity=0.416  Sum_probs=95.6

Q ss_pred             cccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812           9 HINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      ......+....++|++.+.||+|+||.||++.+..   .+|+|.+............         +.+|+.+++.+. |
T Consensus        22 ~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~---------~~~e~~~l~~l~-h   88 (319)
T 2y4i_B           22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKA---------FKREVMAYRQTR-H   88 (319)
T ss_dssp             CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCC---------CCTTGGGGTTCC-C
T ss_pred             ccccccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHH---------HHHHHHHHhcCC-C
Confidence            34456677888999999999999999999998743   4899988754322111111         336788888888 9


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++      ...+..+++|||+++++|.+++.   ..+..+++..++.++.|++.|
T Consensus        89 ~~iv~~~~~~------~~~~~~~iv~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~qi~~a  142 (319)
T 2y4i_B           89 ENVVLFMGAC------MSPPHLAIITSLCKGRTLYSVVR---DAKIVLDVNKTRQIAQEIVKG  142 (319)
T ss_dssp             TTBCCCCEEE------ECSSCEEEECBCCCSEEHHHHTT---SSCCCCCSHHHHHHHHHHHHH
T ss_pred             CCEeEEEEEE------ecCCceEEEeecccCCcHHHHHH---hcCCCCCHHHHHHHHHHHHHH
Confidence            9999999999      67788999999999999999984   233469999999999999876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.67  E-value=4.3e-16  Score=108.72  Aligned_cols=121  Identities=22%  Similarity=0.352  Sum_probs=89.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEc-CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc---CCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDV-ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL---SVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~i~   92 (152)
                      ...++|++.+.||+|+||.||++.+. .+++.+|+|.+...........         .+.+|+.+++.+   . ||||+
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~~e~~~l~~l~~~~-h~~i~   77 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPL---------STIREVAVLRHLETFE-HPNVV   77 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBC---------THHHHHHHHHHHHHTC-CTTBC
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCc---------hhhHHHHHHHhhhccC-CCCeE
Confidence            34578999999999999999999985 5678899999874322111000         023566665554   5 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++..... ......+++|||++ |+|.+++....  ...+++..++.++.|+++|
T Consensus        78 ~~~~~~~~~~~-~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~  132 (326)
T 1blx_A           78 RLFDVCTVSRT-DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRG  132 (326)
T ss_dssp             CEEEEEEEEEC-SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHH
T ss_pred             eeeeeeeeccc-CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHH
Confidence            99998842111 25678999999996 69999986432  2349999999999999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.66  E-value=2.5e-16  Score=119.97  Aligned_cols=116  Identities=19%  Similarity=0.260  Sum_probs=87.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC-CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE-TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ..++|++.+.||+|+||.||++.+.. +++.+|+|.+..... .. ....        +.+|+.++..+. ||||+++++
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~-~~~~--------~~~E~~~l~~l~-hp~iv~~~~  146 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AE-AQAM--------AMAERQFLAEVV-HPSIVQIFN  146 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HH-HHHH--------HHHHHGGGGGCC-CTTBCCEEE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HH-HHHH--------HHHHHHHHHhcC-CCCcCeEee
Confidence            34789999999999999999999876 688999998864321 11 1111        457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++...+. ......|+||||++|++|.+++..      .+++..++.++.||++|
T Consensus       147 ~~~~~~~-~~~~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~a  194 (681)
T 2pzi_A          147 FVEHTDR-HGDPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPA  194 (681)
T ss_dssp             EEEEECT-TSCEEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHH
T ss_pred             eEeecCC-CCCceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHH
Confidence            9853221 111227999999999999887631      49999999999999876

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.66  E-value=1.3e-15  Score=109.37  Aligned_cols=115  Identities=23%  Similarity=0.335  Sum_probs=88.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ..+|.+.+.||+|+||.||++.+..++. +|+|.+......               ..+|+.+++.+. ||||+++++++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---------------~~~E~~il~~l~-h~niv~l~~~~  101 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---------------KNRELQIMRIVK-HPNVVDLKAFF  101 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---------------CCHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---------------HHHHHHHHHhCC-CCCcceEEEEE
Confidence            4479999999999999999999866655 888877543211               125888999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...........++++|||+++ ++.+.+......+..+++..++.++.|+++|
T Consensus       102 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  153 (394)
T 4e7w_A          102 YSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRS  153 (394)
T ss_dssp             EEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred             EecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence            765433445568999999965 5555554444445579999999999999876

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.66  E-value=5.5e-16  Score=109.54  Aligned_cols=109  Identities=14%  Similarity=0.177  Sum_probs=84.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcC--------CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVE--------TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      ..++|.+.+.||+|+||.||++.+..        .++.+|+|.+....    .            +.+|+.++..+. ||
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~----~------------~~~E~~~l~~l~-h~  102 (352)
T 2jii_A           40 SGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG----R------------LFNEQNFFQRAA-KP  102 (352)
T ss_dssp             TSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS----T------------HHHHHHHHHHHC-CH
T ss_pred             cCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc----h------------HHHHHHHHHHhc-cc
Confidence            35799999999999999999999876        47889999987531    1            346777777776 87


Q ss_pred             Ccce---------------eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPS---------------FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~---------------l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++               +++.+.     ...+..|++|||+ +++|.+++....  +..+++..++.++.|+++|
T Consensus       103 niv~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~  171 (352)
T 2jii_A          103 LQVNKWKKLYSTPLLAIPTCMGFGV-----HQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDA  171 (352)
T ss_dssp             HHHHHHHHHTTCTTCSCCCCCEEEE-----ETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhccCCccCccchhhccc-----cCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHH
Confidence            7776               444442     2367899999999 999999996432  2359999999999999886

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.66  E-value=5.5e-16  Score=106.57  Aligned_cols=117  Identities=20%  Similarity=0.249  Sum_probs=83.2

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcC-CCC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVE-TGD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ....++|++.+.||+|+||.||++.+.. ++.  .+|+|++.............        +.+|+.++..+. ||||+
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~e~~~l~~l~-h~~i~   84 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--------FIREVNAMHSLD-HRNLI   84 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHH--------HHHHHHHHHHCC-CTTBC
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHH--------HHHHHHHHHhCC-CCCcc
Confidence            3456789999999999999999998643 333  58999886532222111111        557999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      ..+ ..+++|||+++++|.+++....   ..+++..++.++.|+++|
T Consensus        85 ~~~~~~------~~~-~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~  133 (291)
T 1u46_A           85 RLYGVV------LTP-PMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEG  133 (291)
T ss_dssp             CEEEEE------CSS-SCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHH
T ss_pred             cEEEEE------ccC-CceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHH
Confidence            999998      433 4899999999999999996432   248999999999999876

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.66  E-value=1.6e-15  Score=105.46  Aligned_cols=116  Identities=19%  Similarity=0.300  Sum_probs=86.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|.+.+.||+|+||.||++.+..+++.+|+|.+....  ......         +.+|+.+++.+. ||||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~---------~~~e~~~l~~l~-h~~iv~~~~~   76 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKH---------ALREIKIIRRLD-HDNIVKVFEI   76 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHH---------HHHHHHHHHTCC-CTTBCCEEEE
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHH---------HHHHHHHHHhcC-CCCeeEEEEe
Confidence            3578999999999999999999998889999999987432  111111         457999999998 9999999988


Q ss_pred             eeecC--------CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRG--------GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~--------~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +....        .....+..+++|||++ |+|.++++   .  ..+++..++.++.|+++|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~--~~~~~~~~~~~~~qi~~~  132 (320)
T 2i6l_A           77 LGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE---Q--GPLLEEHARLFMYQLLRG  132 (320)
T ss_dssp             ECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT---T--CCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCceeEEeeccC-CCHHHHhh---c--CCccHHHHHHHHHHHHHH
Confidence            73211        0023478999999996 69998883   2  259999999999999876

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.66  E-value=2.7e-15  Score=103.31  Aligned_cols=111  Identities=23%  Similarity=0.299  Sum_probs=87.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+...... ..            +.+|+.++..+. |++++..+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~------------~~~e~~~l~~l~-~~~~i~~~~~   72 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-PQ------------LHIESKIYKMMQ-GGVGIPTIRW   72 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-CH------------HHHHHHHHHHHT-TSTTCCCEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-hH------------HHHHHHHHHHhh-cCCCCCcccc
Confidence            357899999999999999999999899999999998754322 11            346888888888 6655544444


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.     ...+..+++|||+ +++|.+++...   +..+++..++.++.|++.|
T Consensus        73 ~~-----~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~  117 (296)
T 3uzp_A           73 CG-----AEGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISR  117 (296)
T ss_dssp             EE-----EETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHH
T ss_pred             cc-----CCCCceEEEEEec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHH
Confidence            42     4567899999999 99999999532   2359999999999999876

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.66  E-value=1.1e-15  Score=108.05  Aligned_cols=116  Identities=22%  Similarity=0.380  Sum_probs=89.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|.+.+.||+|+||.||++.+..+++.+|+|.+............         +.+|+.+++.+. ||||+++++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-h~~iv~~~~~~   92 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKR---------AYRELLLLKHMQ-HENVIGLLDVF   92 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEEE
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHH---------HHHHHHHHHhcC-CCCcccHhheE
Confidence            46899999999999999999999999999999999754322211111         457999999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ............|++|||++ |+|.+++.      ..+++..++.++.|++.|
T Consensus        93 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~a  138 (353)
T 3coi_A           93 TPASSLRNFYDFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKG  138 (353)
T ss_dssp             CSCSSGGGCCCCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHH
T ss_pred             ecccccccceeEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHH
Confidence            42111011124699999996 68877762      249999999999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.66  E-value=6.9e-16  Score=110.24  Aligned_cols=116  Identities=16%  Similarity=0.247  Sum_probs=89.0

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-------CCCCc
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-------VHPNI   91 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-------~~~~i   91 (152)
                      .++|++.+.||+|+||.||++.+..+++.+|+|.+.......+.            +.+|+.+++.+.       .|+||
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~~~~~~~~~~~~i  103 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET------------ALDEIRLLKSVRNSDPNDPNREMV  103 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHH------------HHHHHHHHHHHHHSCTTCGGGGGB
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHH------------HHHHHHHHHHHhhcCCCCCCccee
Confidence            57899999999999999999999999999999998743111111            346777777664       27889


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++.+....  .....++++|||+ +++|.+++..  .....+++..++.++.||++|
T Consensus       104 v~~~~~~~~~~--~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~a  158 (397)
T 1wak_A          104 VQLLDDFKISG--VNGTHICMVFEVL-GHHLLKWIIK--SNYQGLPLPCVKKIIQQVLQG  158 (397)
T ss_dssp             CCEEEEEEEEE--TTEEEEEEEECCC-CCBHHHHHHH--TTTSCCCHHHHHHHHHHHHHH
T ss_pred             eeeecceeecC--CCCceEEEEEecc-CccHHHHHHh--cccCCCCHHHHHHHHHHHHHH
Confidence            99999884221  1567899999999 6777777743  222359999999999999886

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.65  E-value=3.9e-16  Score=109.07  Aligned_cols=123  Identities=17%  Similarity=0.247  Sum_probs=94.3

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-CCCCcc
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-VHPNIP   92 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~   92 (152)
                      ......++|++.+.||+|+||.||++.+..+++.+|+|.+.............     ...+.+|+.+++.+. +|||++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~~i~  111 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN-----GTRVPMEVVLLKKVSSGFSGVI  111 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTT-----CCEEEHHHHHHHHHCSSSCSBC
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhh-----hhHHHHHHHHHHhhccCCCCce
Confidence            34556788999999999999999999998999999999997543221000000     001346888888886 269999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCC-CChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTG-GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ..++..+++||++.+ ++|.+++..  .  ..+++..++.++.|+++|
T Consensus       112 ~~~~~~------~~~~~~~lv~e~~~~~~~L~~~l~~--~--~~l~~~~~~~i~~qi~~~  161 (320)
T 3a99_A          112 RLLDWF------ERPDSFVLILERPEPVQDLFDFITE--R--GALQEELARSFFWQVLEA  161 (320)
T ss_dssp             CEEEEE------ECSSEEEEEEECCSSEEEHHHHHHH--H--CSCCHHHHHHHHHHHHHH
T ss_pred             EEEEEE------ecCCcEEEEEEcCCCCccHHHHHhc--c--CCCCHHHHHHHHHHHHHH
Confidence            999999      678889999999976 899999853  1  259999999999999876

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.64  E-value=2.6e-15  Score=103.31  Aligned_cols=111  Identities=23%  Similarity=0.293  Sum_probs=83.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|.+....... .            +.+|+.++..+. |++++..+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~------------~~~e~~~l~~l~-~~~~i~~~~~   72 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP-Q------------LHIESKIYKMMQ-GGVGIPTIRW   72 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CC-C------------HHHHHHHHHHHT-TSTTCCCEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccch-H------------HHHHHHHHHHhc-CCCCCCeeee
Confidence            4578999999999999999999998999999999876432211 1            446888888888 6555544444


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.     ...+..+++|||+ +++|.+++...   +..+++..++.++.|++.|
T Consensus        73 ~~-----~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~  117 (296)
T 4hgt_A           73 CG-----AEGDYNVMVMELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISR  117 (296)
T ss_dssp             EE-----EETTEEEEEEECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHH
T ss_pred             ec-----CCCCceEEEEEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Confidence            32     5677899999999 99999998532   2359999999999999876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.64  E-value=1.8e-15  Score=108.11  Aligned_cols=113  Identities=21%  Similarity=0.279  Sum_probs=87.8

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC-----Ccc
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP-----NIP   92 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~i~   92 (152)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|++....    .....        +..|+.++..+..|+     +++
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~--------~~~e~~~l~~l~~~~~~~~~~iv  119 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQ--------AQIEVRLLELMNKHDTEMKYYIV  119 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----HHHHH--------HHHHHHHHHHHHHCSSGGGGGBC
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----HHHHH--------HHHHHHHHHHHHhcccccceeEE
Confidence            3578999999999999999999998899999999987421    11111        335666666654344     589


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.+      ...+.+++||||++ |+|.+++.....  ..+++..++.++.|++.|
T Consensus       120 ~~~~~~------~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~a  169 (382)
T 2vx3_A          120 HLKRHF------MFRNHLCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTA  169 (382)
T ss_dssp             CEEEEE------EETTEEEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHH
T ss_pred             Eeeeee------ccCCceEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHH
Confidence            999998      56789999999995 699999964322  349999999999999876

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.64  E-value=1.9e-15  Score=105.67  Aligned_cols=115  Identities=23%  Similarity=0.364  Sum_probs=88.4

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEE-cCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-----CCC
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKD-VETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-----VHP   89 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~   89 (152)
                      ....++|++.+.||+|+||.||++.+ ..+++.+|+|.+.......+.            +.+|+.++..+.     .|+
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~e~~~l~~l~~~~~~~~~   77 (339)
T 1z57_A           10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA------------ARSEIQVLEHLNTTDPNSTF   77 (339)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHH------------HHHHHHHHHHHHHHCTTCTT
T ss_pred             CCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHH------------HHHHHHHHHHhhhcCCCCce
Confidence            34567999999999999999999998 457888999998642111111            345677766664     134


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++.+      ...+.++++|||+ +++|.+++....  ...+++..++.++.|+++|
T Consensus        78 ~i~~~~~~~------~~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~  130 (339)
T 1z57_A           78 RCVQMLEWF------EHHGHICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKS  130 (339)
T ss_dssp             CBCCEEEEE------EETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHH
T ss_pred             eeEeeeccc------ccCCcEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHH
Confidence            599999998      6778999999999 899999996422  2358999999999999876

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.64  E-value=1.6e-15  Score=107.21  Aligned_cols=120  Identities=24%  Similarity=0.329  Sum_probs=79.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+.........            ...++..+..+. ||||++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~~~~~l~~l~-h~niv~~~~~   87 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR------------ELQIMQDLAVLH-HPNIVQLQSY   87 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCH------------HHHHHHHHHHHC-CTTBCCEEEE
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHH------------HHHHHHHHHhcC-CCCcccHHHh
Confidence            346899999999999999999999999999999988654322221            224556666777 9999999999


Q ss_pred             eeecCC-CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGG-QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~-~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +..... .....+++++|||+++ +|.+.+.........+++..++.++.|++.|
T Consensus        88 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  141 (360)
T 3e3p_A           88 FYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRS  141 (360)
T ss_dssp             EEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             hhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence            865321 1233458999999965 6666665444444579999999999999876

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.64  E-value=1.9e-17  Score=116.35  Aligned_cols=120  Identities=28%  Similarity=0.320  Sum_probs=83.1

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCc-----hhhHHHHHHHhhhhhHHHHHHHHhccC-----
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-----IEEIEEEYLVLKDLSIEEEYLVLKDLS-----   86 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~-----~~~~~~~~~~~~~~~~~~e~~~~~~~~-----   86 (152)
                      ...++|++.+.||+|+||.||++.+  +++.||+|.+......     .......        +.+|+.+++.+.     
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~--------~~~E~~~l~~l~~l~~~   86 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEE--------ILPEIIISKELSLLSGE   86 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHH--------HHHHHHHHHHHHHGGGC
T ss_pred             cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHH--------HHHHHHHHHHHHHhhcc
Confidence            3457899999999999999999987  6789999999864321     0000010        335666665553     


Q ss_pred             ---CCCCcceeeeeeeecC-----------------C-------CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHH
Q psy2812          87 ---VHPNIPSFYGLYLRRG-----------------G-------QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED  139 (152)
Q Consensus        87 ---~~~~i~~l~~~~~~~~-----------------~-------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~  139 (152)
                         .|||++++.+.+....                 +       ....+.+|+||||+++|++.+.+.   .  ..+++.
T Consensus        87 ~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~--~~~~~~  161 (336)
T 2vuw_A           87 VCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---T--KLSSLA  161 (336)
T ss_dssp             SSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---T--TCCCHH
T ss_pred             ccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---h--cCCCHH
Confidence               3666666665532110                 0       012678999999999997777662   2  258999


Q ss_pred             HHHHHHHhhhcc
Q psy2812         140 QIAYILYGTVQV  151 (152)
Q Consensus       140 ~~~~~~~qi~~a  151 (152)
                      .++.++.||+.|
T Consensus       162 ~~~~i~~qi~~a  173 (336)
T 2vuw_A          162 TAKSILHQLTAS  173 (336)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999999976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.6e-15  Score=106.29  Aligned_cols=110  Identities=23%  Similarity=0.382  Sum_probs=83.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhc--cCCCCCcceee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD--LSVHPNIPSFY   95 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~i~~l~   95 (152)
                      ..++|++.+.||+|+||.||++.+.  ++.+|+|.+....  ...            ...|..++..  +. ||||++++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~------------~~~e~~~~~~~~~~-h~~i~~~~   97 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EAS------------WFRETEIYQTVLMR-HENILGFI   97 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHH------------HHHHHHHHTSTTCC-CTTBCCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cch------------hhhHHHHHHHHhhc-CCCeeeEE
Confidence            4468999999999999999999874  8899999986421  111            1234444433  45 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+....  .....++++|||+++|+|.++++.   .  .+++..++.++.|++.|
T Consensus        98 ~~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~---~--~~~~~~~~~i~~~i~~~  146 (337)
T 3mdy_A           98 AADIKGT--GSWTQLYLITDYHENGSLYDYLKS---T--TLDAKSMLKLAYSSVSG  146 (337)
T ss_dssp             EEEEESC--GGGCEEEEEECCCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             EEEccCC--CCCCceEEEEeccCCCcHHHHhhc---c--CCCHHHHHHHHHHHHHH
Confidence            9985321  122689999999999999999942   2  48999999999999876

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.63  E-value=3.7e-15  Score=104.45  Aligned_cols=116  Identities=22%  Similarity=0.191  Sum_probs=84.9

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .....++|++.+.||+|+||.||++..  +++.+|+|++....  .....          ...++..+..+. ||||+++
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~----------~e~~~~~~~~~~-h~~i~~~   72 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN--RQNFI----------NEKNIYRVPLME-HDNIARF   72 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG--HHHHH----------HHHHHHTSTTCC-CTTBCCE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc--hhhHH----------HHHHHHHHHhcc-Ccchhhh
Confidence            345678999999999999999999975  67899999987422  11111          113444444566 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+..... .....++++|||+++|+|.++++.   .  ..++..++.++.|+++|
T Consensus        73 ~~~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~---~--~~~~~~~~~i~~qi~~~  123 (336)
T 3g2f_A           73 IVGDERVTA-DGRMEYLLVMEYYPNGSLXKYLSL---H--TSDWVSSCRLAHSVTRG  123 (336)
T ss_dssp             EEEEEEECT-TSCEEEEEEECCCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             eeccccccc-CCCceEEEEEecCCCCcHHHHHhh---c--ccchhHHHHHHHHHHHH
Confidence            875432111 345678999999999999999942   2  36899999999999876

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.63  E-value=6.4e-17  Score=122.34  Aligned_cols=122  Identities=24%  Similarity=0.320  Sum_probs=91.7

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..+|+|.+..... ......         +.+|+.++..+. ||||++++++
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~-~~~~~~---------~~~Ei~iL~~L~-HpnIV~l~~v   80 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS-PKNRER---------WCLEIQIMKKLN-HPNVVSAREV   80 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC-HHHHHH---------HHHHHHHHHHCC-BTTBCCEEEC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC-HHHHHH---------HHHHHHHHHhCC-CCCCCceeee
Confidence            34789999999999999999999888899999998865321 111111         557999999998 9999999998


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.........+..+++|||++||+|.+++..... ...+++..++.++.|++.|
T Consensus        81 ~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~a  133 (676)
T 3qa8_A           81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSA  133 (676)
T ss_dssp             CTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHH
T ss_pred             ecccccccCCCeEEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHH
Confidence            7321111236778999999999999999964332 2259999999999999876

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.63  E-value=3.2e-15  Score=109.84  Aligned_cols=111  Identities=27%  Similarity=0.354  Sum_probs=89.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||++.+..++..||+|++....... .            +..|+.++..+..+++++.+..+
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-~------------~~~E~~il~~L~~~~~i~~i~~~   71 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP-Q------------LLYESKIYRILQGGTGIPNVRWF   71 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC-C------------HHHHHHHHHHTTTSTTCCCEEEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH-H------------HHHHHHHHHHhcCCCCCCeEEEE
Confidence            3578999999999999999999998999999999887433211 1            44688888888845666666665


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ...+..+++|||+ +++|.+++...   ...+++..++.++.||+.|
T Consensus        72 ~------~~~~~~~lvme~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~a  115 (483)
T 3sv0_A           72 G------VEGDYNVLVMDLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINR  115 (483)
T ss_dssp             E------EETTEEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHH
T ss_pred             E------eeCCEEEEEEECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHH
Confidence            5      5677899999999 99999999642   2359999999999999876

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.63  E-value=2.1e-15  Score=108.43  Aligned_cols=114  Identities=23%  Similarity=0.444  Sum_probs=82.8

Q ss_pred             CCceEE-EEEeeccceeEEEEEEEc--CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKL-QELIGEGTYGEVYWAKDV--ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~-~~~lg~G~~g~V~~~~~~--~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .+.|.+ .+.||+|+||.||++.++  .++..+|+|.+....... .            +.+|+.+++.+. ||||++++
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~-~------------~~~E~~~l~~l~-hpniv~~~   84 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM-S------------ACREIALLRELK-HPNVISLQ   84 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCH-H------------HHHHHHHHHHCC-CTTBCCCC
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH-H------------HHHHHHHHHhcC-CCCeeeEe
Confidence            345766 447999999999999976  467889999987533221 1            447999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhC-----CCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR-----GVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-----~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++..    .....+|++|||++ |+|.+++......     ...+++..++.++.||+.|
T Consensus        85 ~~~~~----~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  140 (405)
T 3rgf_A           85 KVFLS----HADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG  140 (405)
T ss_dssp             EEEEE----TTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHH
T ss_pred             eEEec----CCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHH
Confidence            99854    45678999999995 6888888644321     1249999999999999886

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.62  E-value=3.4e-15  Score=104.81  Aligned_cols=109  Identities=27%  Similarity=0.373  Sum_probs=85.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhc--cCCCCCcceeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD--LSVHPNIPSFYG   96 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~i~~l~~   96 (152)
                      .++|.+.+.||+|+||.||++.+  +++.+|+|.+....  ...            +.+|..++..  +. ||||+++++
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~------------~~~e~~~~~~~~l~-h~ni~~~~~  103 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERS------------WFREAEIYQTVMLR-HENILGFIA  103 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHH------------HHHHHHHHHHSCCC-CTTBCCEEE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHH------------HHHHHHHHHHhhcC-CCcEEEEEe
Confidence            36899999999999999999987  58899999986321  111            3357777766  56 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+....  .....++++|||+++|+|.++++.   .  .+++..++.++.|++.|
T Consensus       104 ~~~~~~--~~~~~~~lv~e~~~~g~L~~~l~~---~--~~~~~~~~~i~~~i~~~  151 (342)
T 1b6c_B          104 ADNKDN--GTWTQLWLVSDYHEHGSLFDYLNR---Y--TVTVEGMIKLALSTASG  151 (342)
T ss_dssp             EEECCC--SSCCCEEEEECCCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             eecccC--CccceeEEEEeecCCCcHHHHHhc---c--CccHHHHHHHHHHHHHH
Confidence            984211  111379999999999999999953   2  48999999999999876

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.62  E-value=1.4e-15  Score=107.87  Aligned_cols=118  Identities=20%  Similarity=0.292  Sum_probs=89.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC----------
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS----------   86 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~----------   86 (152)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|++.........            +.+|+.++..+.          
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------~~~e~~~l~~l~~~~~~~~~~~   83 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA------------AEDEIKLLQRVNDADNTKEDSM   83 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHH------------HHHHHHHHHHHHHTCCSHHHHH
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhh------------hhHHHHHHHHhhcccccchhcc
Confidence            3457899999999999999999999899999999998743211111            335666655543          


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .||||+++++.+...+  .....++++||++ +++|.+++.....  ..+++..++.++.||+.|
T Consensus        84 ~~~~i~~~~~~~~~~~--~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~a  143 (373)
T 1q8y_A           84 GANHILKLLDHFNHKG--PNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLG  143 (373)
T ss_dssp             HHTTBCCCCEEEEEEE--TTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHhhccC--CCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHH
Confidence            1789999999984321  1234799999999 9999999965333  349999999999999876

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.58  E-value=2.8e-14  Score=101.54  Aligned_cols=121  Identities=17%  Similarity=0.121  Sum_probs=74.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHH---HHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE---YLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~i~~   93 (152)
                      ....+|++.+.||+|+||.||++.+..+++.+|+|.+.............        +.+|   +..+.. . |||+++
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--------~~~E~~~~~~l~~-~-hp~iv~  128 (371)
T 3q60_A           59 QGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELER--------LHEATFAAARLLG-E-SPEEAR  128 (371)
T ss_dssp             CCEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHH--------HHHHHHHHHHHHC---------
T ss_pred             CCceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHH--------HHHHHHHHHHhcc-c-Chhhhh
Confidence            34456999999999999999999998899999999998654322222211        3356   445555 5 999887


Q ss_pred             eeeeee-------ecCC-----------CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHH------HHHHHhhh
Q psy2812          94 FYGLYL-------RRGG-----------QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI------AYILYGTV  149 (152)
Q Consensus        94 l~~~~~-------~~~~-----------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~~~~qi~  149 (152)
                      ++..+.       ..+.           ......+|+||||++ |+|.+++.....   .+++...      +.++.||+
T Consensus       129 ~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~  204 (371)
T 3q60_A          129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLI  204 (371)
T ss_dssp             ---CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHH
T ss_pred             hceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHH
Confidence            653331       1100           001155899999998 899999975433   3455555      56778888


Q ss_pred             cc
Q psy2812         150 QV  151 (152)
Q Consensus       150 ~a  151 (152)
                      +|
T Consensus       205 ~a  206 (371)
T 3q60_A          205 RL  206 (371)
T ss_dssp             HH
T ss_pred             HH
Confidence            76

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.58  E-value=2e-14  Score=101.15  Aligned_cols=112  Identities=20%  Similarity=0.317  Sum_probs=86.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCC-CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC------
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETG-DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN------   90 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~------   90 (152)
                      ..++|++.+.||+|+||.||++.+..++ ..+|+|++.........            +.+|+.+++.+. |++      
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------------~~~E~~~l~~l~-~~~~~~~~~   83 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA------------ARLEINVLKKIK-EKDKENKFL   83 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHH------------HHHHHHHHHHHH-HHCTTSCSC
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhH------------HHHHHHHHHHHh-hcCCCCcee
Confidence            4578999999999999999999987776 68999998642211111            345777777665 544      


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++.+.+.+      ...+..+++|||+ ++++.+++..  .....+++..++.++.||+.|
T Consensus        84 ~~~~~~~~------~~~~~~~lv~e~~-~~~l~~~l~~--~~~~~~~~~~~~~i~~qi~~~  135 (355)
T 2eu9_A           84 CVLMSDWF------NFHGHMCIAFELL-GKNTFEFLKE--NNFQPYPLPHVRHMAYQLCHA  135 (355)
T ss_dssp             BCCEEEEE------EETTEEEEEEECC-CCBHHHHHHH--TTTCCCCHHHHHHHHHHHHHH
T ss_pred             EEEeeeee------eeCCeEEEEEecc-CCChHHHHHh--ccCCCCCHHHHHHHHHHHHHH
Confidence            88888888      6778999999999 7788887753  222359999999999999876

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.55  E-value=1.1e-14  Score=105.76  Aligned_cols=111  Identities=16%  Similarity=0.261  Sum_probs=85.1

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .....+|.+.+.||+|+||.|+.. ...+++.||+|.+......  .            +.+|+.+++.+..||||++++
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~~--~------------~~~E~~~l~~l~~HpnIv~l~   84 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECFS--F------------ADREVQLLRESDEHPNVIRYF   84 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTEE--E------------CHHHHHHHHHSCCCTTBCCEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHHH--H------------HHHHHHHHHhccCCCCcCeEE
Confidence            344557999999999999997643 3467889999998642211  0            346888998884599999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+      ......|++||||. |+|.+++..   ....+++..++.++.||++|
T Consensus        85 ~~~------~~~~~~~lv~E~~~-g~L~~~l~~---~~~~~~~~~~~~i~~qi~~a  130 (432)
T 3p23_A           85 CTE------KDRQFQYIAIELCA-ATLQEYVEQ---KDFAHLGLEPITLLQQTTSG  130 (432)
T ss_dssp             EEE------EETTEEEEEEECCS-EEHHHHHHS---SSCCCCSSCHHHHHHHHHHH
T ss_pred             EEE------ecCCEEEEEEECCC-CCHHHHHHh---cCCCccchhHHHHHHHHHHH
Confidence            998      67888999999995 699999853   23346666778889998876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.54  E-value=2.2e-14  Score=104.16  Aligned_cols=119  Identities=23%  Similarity=0.268  Sum_probs=81.2

Q ss_pred             cccccCC-CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          11 NIDSLRD-PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        11 ~~~~~~~-~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      ++..... ..+.|.+.+.||+|+||.||.+. ..+++.||+|.+....  .+.            +.+|+.++..+..||
T Consensus         5 ~~p~~~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~--~~~------------~~~E~~~l~~l~~Hp   69 (434)
T 2rio_A            5 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF--CDI------------ALMEIKLLTESDDHP   69 (434)
T ss_dssp             ---CCSCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG--HHH------------HHHHHHHHHHHTTST
T ss_pred             cccchhhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH--HHH------------HHHHHHHHHhccCCC
Confidence            3344433 34456667889999999998654 4678999999986421  111            346888888764499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCC---CCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV---SLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++.+      ...+.+|++||||. |+|.+++........   ..++..++.++.||+.|
T Consensus        70 nIv~~~~~~------~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  127 (434)
T 2rio_A           70 NVIRYYCSE------TTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG  127 (434)
T ss_dssp             TBCCEEEEE------ECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHH
T ss_pred             CcCeEEEEE------ecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHH
Confidence            999999998      77889999999995 699999964322111   12344567788898876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.43  E-value=7e-13  Score=99.25  Aligned_cols=107  Identities=16%  Similarity=0.160  Sum_probs=73.1

Q ss_pred             EeeccceeEEEEEEEcCCCCeEEEEEeecCCCc----hhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecC
Q psy2812          27 LIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN----IEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRG  102 (152)
Q Consensus        27 ~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~  102 (152)
                      ..+.|..|.+..++..-.|+.+++|.+.+....    .+.......     .+.+|+.+|+++..|+||+++++++    
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~~~~~~~i~~~~~~~----  311 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKY-----ELHNEIKFLTQPPAGFDAPAVLAHG----  311 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHH-----HHHHHHHHHHSCCTTCCCCCEEEEE----
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHH-----HHHHHHHHHHhcCCCCCeeEEEEEE----
Confidence            455666666665555557888999999754321    112221111     2668999999997799999999999    


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                        ++++.+||||||++|++|.++++.    +..+++.   .|+.||++|
T Consensus       312 --ed~~~~yLVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~A  351 (569)
T 4azs_A          312 --ENAQSGWLVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRS  351 (569)
T ss_dssp             --ECSSEEEEEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHH
T ss_pred             --EECCEEEEEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHH
Confidence              889999999999999999999953    2347665   478899876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.32  E-value=3.1e-12  Score=87.97  Aligned_cols=108  Identities=18%  Similarity=0.189  Sum_probs=68.6

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhH---H----HHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEI---E----EEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~---~----~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      .|.+.+.||+|+||.||++.+ .+++.+|+|.++.........   .    ..+.......+.+|+.+++.+. |+   +
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~---~  165 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GL---A  165 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TS---S
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CC---C
Confidence            344559999999999999998 788999999986432211100   0    0000011122668999999997 54   4


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +.+.+       ..+..|++|||++||+|.+ +.        .  .....++.|+++|
T Consensus       166 v~~~~-------~~~~~~lvmE~~~g~~L~~-l~--------~--~~~~~i~~qi~~~  205 (282)
T 1zar_A          166 VPKVY-------AWEGNAVLMELIDAKELYR-VR--------V--ENPDEVLDMILEE  205 (282)
T ss_dssp             SCCEE-------EEETTEEEEECCCCEEGGG-CC--------C--SCHHHHHHHHHHH
T ss_pred             cCeEE-------eccceEEEEEecCCCcHHH-cc--------h--hhHHHHHHHHHHH
Confidence            44444       1245799999999999988 41        1  1233577777654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.28  E-value=5.5e-12  Score=93.91  Aligned_cols=104  Identities=19%  Similarity=0.181  Sum_probs=64.1

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      ..+.||+|+||.||++.  ..+..+++|................   ....+.+|+.+++.++ ||||+++..+.     
T Consensus       340 ~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~---~~~~~~~E~~il~~l~-h~nIv~~~~~~-----  408 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENI---RKSRTAREARYLALVK-DFGIPAPYIFD-----  408 (540)
T ss_dssp             --------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHH---HHHHHHHHHHHHHHGG-GGTCCCCCEEE-----
T ss_pred             CCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHH---HHHHHHHHHHHHHhcC-CCCcCceEEEE-----
Confidence            45689999999999994  4567889887654222211111110   0112568999999998 99999544443     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ...+..|++|||++|++|.++++.            ++.++.|+++|
T Consensus       409 -~~~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~a  443 (540)
T 3en9_A          409 -VDLDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEI  443 (540)
T ss_dssp             -EETTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHH
T ss_pred             -EeCCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHH
Confidence             224456999999999999998842            44666776654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.26  E-value=2.6e-11  Score=87.47  Aligned_cols=124  Identities=13%  Similarity=0.079  Sum_probs=78.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCccee-
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSF-   94 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l-   94 (152)
                      .....|...+.||+|+||.||++.+..+++.+|+|++.............        +.+|+.++..+. | ++.... 
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~--------~~~E~~~~~~l~-~~~~~~~~~  145 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQ--------MKEEVLRLRLLR-GIKNQKQAK  145 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHH--------HHHHHHGGGGST-TCCSHHHHH
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHH--------HHHHHHHHHhhc-cCCCHHHHH
Confidence            34556899999999999999999999999999999987433222111111        446777777776 4 221111 


Q ss_pred             --------------------eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh---CCCCCCHHHHHHHHHhhhcc
Q psy2812          95 --------------------YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK---RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 --------------------~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~~~~qi~~a  151 (152)
                                          ...+.. .........+++|+++ +++|.++++....   .+..+++..++.++.|+++|
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a  223 (413)
T 3dzo_A          146 VHLRFIFPFDLVKDPQKKKMIRVRLD-ERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL  223 (413)
T ss_dssp             HHTCBCCCCEEEECCC----------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HhcccccchhhcccCCCCccccccCC-CccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence                                111100 0001123478888876 7899999965432   23357888999999999876

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.05  E-value=1.8e-10  Score=78.13  Aligned_cols=114  Identities=19%  Similarity=0.243  Sum_probs=70.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCe--EEEEEeecCCCchhhHHHH-------------HHHhhhhhHHHHHHHHhc
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDH--VAIKIMENIPENIEEIEEE-------------YLVLKDLSIEEEYLVLKD   84 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~--~a~K~i~~~~~~~~~~~~~-------------~~~~~~~~~~~e~~~~~~   84 (152)
                      .-|.+.+.||+|+||.||++.+..+|+.  +|+|+++............             ........+.+|+.++..
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3478999999999999999998778888  9999876432111100000             000111235689999998


Q ss_pred             cCCCCCc--ceeeeeeeecCCCCCCceEEEEEcccCC-C----ChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          85 LSVHPNI--PSFYGLYLRRGGQPEEDQLWFVMELCTG-G----SVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        85 ~~~~~~i--~~l~~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +. |+++  +.++..          +..++||||+.+ |    +|.++..       ..++..+..++.|++.|
T Consensus       127 l~-~~~i~~p~~~~~----------~~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~  182 (258)
T 1zth_A          127 AK-EAGVSVPQPYTY----------MKNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVEN  182 (258)
T ss_dssp             HH-HTTCCCCCEEEE----------ETTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHH
T ss_pred             HH-hCCCCCCeEEEc----------CCCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHH
Confidence            87 7654  333321          346899999942 4    5554431       12355677788887765

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.94  E-value=7.7e-10  Score=79.05  Aligned_cols=95  Identities=18%  Similarity=0.257  Sum_probs=58.4

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch-----------hhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI-----------EEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~-----------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      -|.+...||+|+||.||+|.+ .+|+.+|+|+++......           ......+..+..++..+|...+..+. ++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~  173 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE  173 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred             EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence            489999999999999999986 568899999876432110           00111122223334556777777664 44


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHH
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL  125 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  125 (152)
                      ++.....+.        ....++||||++|++|..+
T Consensus       174 gv~vp~p~~--------~~~~~LVME~i~G~~L~~l  201 (397)
T 4gyi_A          174 GFPVPEPIA--------QSRHTIVMSLVDALPMRQV  201 (397)
T ss_dssp             TCSCCCEEE--------EETTEEEEECCSCEEGGGC
T ss_pred             CCCCCeeee--------ccCceEEEEecCCccHhhh
Confidence            332221111        1123799999998887554

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.32  E-value=1.6e-06  Score=58.50  Aligned_cols=87  Identities=11%  Similarity=0.099  Sum_probs=64.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ..|.+...++.|+.+.||++..  .++.+++|...........           .+.+|+.++..+..+..++++++.. 
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~-----------~~~~E~~~l~~l~~~~~vP~v~~~~-   79 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTY-----------DVEREKDMMLWLEGKLPVPKVLHFE-   79 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTT-----------CHHHHHHHHHHHTTTSCCCCEEEEE-
T ss_pred             ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHH-----------HHHHHHHHHHHHhcCCCCCeEEEEE-
Confidence            3588888899899999999864  3678999987642111000           1447888888886577788888887 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHH
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDL  125 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~  125 (152)
                           ...+..|++||+++|.+|.+.
T Consensus        80 -----~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           80 -----RHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             -----EETTEEEEEEECCSSEEHHHH
T ss_pred             -----ecCCceEEEEEecCCeehhhc
Confidence                 566789999999999888765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.55  E-value=0.00057  Score=45.55  Aligned_cols=87  Identities=10%  Similarity=0.108  Sum_probs=57.5

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC-CCccee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH-PNIPSF   94 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-~~i~~l   94 (152)
                      ......+.+....+.|..+.||++.. .++..+++|.....  ....            +..|+.+++.+..+ -.++++
T Consensus        16 ~~~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~------------~~~E~~~l~~l~~~~~~vP~~   80 (264)
T 1nd4_A           16 VERLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNE------------LQDEAARLSWLATTGVPCAAV   80 (264)
T ss_dssp             TTTTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSC------------HHHHHHHHHHHHTTTCCBCCE
T ss_pred             HHhcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchh------------hhHHHHHHHHHHhCCCCCCeE
Confidence            33445676655444666689999864 55677999986542  1111            34677777777534 226677


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChH
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~  123 (152)
                      +...      ...+..+++|||++|.+|.
T Consensus        81 ~~~~------~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           81 LDVV------TEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             EEEE------ECSSCEEEEEECCSSEETT
T ss_pred             EEec------cCCCCCEEEEEecCCcccC
Confidence            7776      5567799999999998874

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.31  E-value=0.0012  Score=46.49  Aligned_cols=83  Identities=19%  Similarity=0.313  Sum_probs=53.0

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEee--cCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC-CCCcceeeeeeee
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIME--NIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV-HPNIPSFYGLYLR  100 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~l~~~~~~  100 (152)
                      -++.++.|.++.+|++..  .+..+++|...  ....... . .        .+.+|..++..+.. +..+++++..+  
T Consensus        42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~-~-~--------~~~~E~~~l~~L~~~~vpvP~~~~~~--  107 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPS-A-H--------AIEREYRVMDALAGTDVPVAKMYALC--  107 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC--SSCEEEEECCCC--------------------CHHHHHHHHHHHTTSSSCCCCEEEEE--
T ss_pred             eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCc-H-H--------HHHHHHHHHHHhhcCCCCCCcEEEEC--
Confidence            467889999999999875  34577887654  2211000 0 0        14578888887763 34577888776  


Q ss_pred             cCCCCCC---ceEEEEEcccCCCChHH
Q psy2812         101 RGGQPEE---DQLWFVMELCTGGSVTD  124 (152)
Q Consensus       101 ~~~~~~~---~~~~lv~e~~~~g~L~~  124 (152)
                          ...   +..|++|||++|.++.+
T Consensus       108 ----~~~~~~g~~~~vme~v~G~~l~~  130 (359)
T 3dxp_A          108 ----EDESVIGRAFYIMEFVSGRVLWD  130 (359)
T ss_dssp             ----CCTTTTSSCEEEEECCCCBCCCC
T ss_pred             ----CCCCccCCeEEEEEecCCeecCC
Confidence                333   56899999999877643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.31  E-value=0.038  Score=36.98  Aligned_cols=79  Identities=14%  Similarity=0.253  Sum_probs=53.5

Q ss_pred             eecccee-EEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCCCCC
Q psy2812          28 IGEGTYG-EVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPE  106 (152)
Q Consensus        28 lg~G~~g-~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~~~~  106 (152)
                      +..|.-+ .||+......+..+.+|.-+..  ....            +..|...+..+..+--+++++...      +.
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~------------~~~E~~~l~~l~~~vPVP~v~~~~------~~   91 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS--VAND------------VTDEMVRLNWLTAFMPLPTIKHFI------RT   91 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHH------------HHHHHHHHHHHTTTSCCCCEEEEE------EE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhH------------HHHHHHHHHHhccCCCcCeEEEEE------EE
Confidence            3344433 5888876666777888876531  1111            346778787776554577777777      56


Q ss_pred             CceEEEEEcccCCCChHHHH
Q psy2812         107 EDQLWFVMELCTGGSVTDLV  126 (152)
Q Consensus       107 ~~~~~lv~e~~~~g~L~~~l  126 (152)
                      .+..|++||+++|.++.+..
T Consensus        92 ~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           92 PDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             TTEEEEEEECCCSEEHHHHH
T ss_pred             CCeEEEEEEeeCCccccccc
Confidence            67899999999998877655

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.85  E-value=0.032  Score=38.73  Aligned_cols=77  Identities=21%  Similarity=0.247  Sum_probs=53.3

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC--CCCcceeeeeeeec
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV--HPNIPSFYGLYLRR  101 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~l~~~~~~~  101 (152)
                      -.+.|+.|....+|+...  .+..+++|.-...  ....            +..|...++.+..  ...+++.+...   
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~------------~~~E~~~L~~L~~~~~v~VP~vl~~~---  100 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSM------------FRAEADQLALLAKTNSINVPLVYGIG---  100 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHH------------HHHHHHHHHHHHHTTSSBCCCEEEEE---
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHH------------HHHHHHHHHHHHhhCCCCcceEEEEe---
Confidence            456789999999999874  4667888876532  1111            3457666666542  35677777766   


Q ss_pred             CCCCCCceEEEEEcccCCCCh
Q psy2812         102 GGQPEEDQLWFVMELCTGGSV  122 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~L  122 (152)
                         ...+..+++||+++|.++
T Consensus       101 ---~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A          101 ---NSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             ---ECSSEEEEEEECCCCCCC
T ss_pred             ---ecCCceEEEEEeccCCCC
Confidence               456789999999998764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.51  E-value=0.024  Score=40.34  Aligned_cols=86  Identities=20%  Similarity=0.080  Sum_probs=45.8

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC--CCcceeeeeeeec
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH--PNIPSFYGLYLRR  101 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~l~~~~~~~  101 (152)
                      -.+.+|.|..+.||++.....++.+++|.............    .........|..++..+...  ..+++++...   
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~----~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d---  106 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESW----PLTIDRARIESSALIRQGEHVPHLVPRVFYSD---  106 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------C----CCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE---
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCC----cCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc---
Confidence            35689999999999997655567899998653211000000    00000023566666655322  2345555432   


Q ss_pred             CCCCCCceEEEEEcccCCCC
Q psy2812         102 GGQPEEDQLWFVMELCTGGS  121 (152)
Q Consensus       102 ~~~~~~~~~~lv~e~~~~g~  121 (152)
                           .+..+++||+++|..
T Consensus       107 -----~~~~~lvmE~l~g~~  121 (397)
T 2olc_A          107 -----TEMAVTVMEDLSHLK  121 (397)
T ss_dssp             -----TTTTEEEECCCTTSE
T ss_pred             -----CCccEEEEEeCCCcc
Confidence                 233579999997643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.26  E-value=0.15  Score=34.96  Aligned_cols=78  Identities=14%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC--CcceeeeeeeecC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP--NIPSFYGLYLRRG  102 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~--~i~~l~~~~~~~~  102 (152)
                      ++.++.|....+|..     +..+++|.-..    .....         .+.+|..++..+..+.  .+++.+....   
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~---------~~~~E~~~L~~L~~~~~v~VP~~~~~~~---   82 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS----QQGAD---------ELNKEIQLLPLLVGCVKVNIPQYVYIGK---   82 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHH---------HHHHHHHHHHHHTTTCSSBCCCEEEEEE---
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC----chHHH---------HHHHHHHHHHHHHhcCCCCCCCeEeecc---
Confidence            456788888888877     45678886321    11111         1457888888886431  3556555542   


Q ss_pred             CCCCCceEEEEEcccCCCChHHH
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDL  125 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~  125 (152)
                        ...+..+++||+++|.++.+.
T Consensus        83 --~~~g~~~~v~e~i~G~~l~~~  103 (306)
T 3tdw_A           83 --RSDGNPFVGYRKVQGQILGED  103 (306)
T ss_dssp             --CTTSCEEEEEECCCSEECHHH
T ss_pred             --cCCCceEEEEeccCCeECchh
Confidence              235667899999999887663

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.05  E-value=0.24  Score=33.55  Aligned_cols=81  Identities=15%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC--CCcceeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH--PNIPSFYGL   97 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~l~~~   97 (152)
                      ....-++.+|.|..+.||+... .+|+.+.+|.-+.........           +..|+..|+.+...  -.+++.+..
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~-----------~~~Ea~~L~~L~~~~~vpvP~v~~~   82 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGL-----------FRAEALGLDWLGRSFGSPVPQVAGW   82 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTH-----------HHHHHHHHHHHTCSTTCCSCCEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhH-----------HHHHHHHHHHHHhhCCCCcceEEec
Confidence            3456678899999999999985 678889999765322111111           33677777766422  234454443


Q ss_pred             eeecCCCCCCceEEEEEcccCCCCh
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSV  122 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L  122 (152)
                      .          .-+++||+++++..
T Consensus        83 ~----------~~~lv~e~l~~~~~   97 (288)
T 3f7w_A           83 D----------DRTLAMEWVDERPP   97 (288)
T ss_dssp             E----------TTEEEEECCCCCCC
T ss_pred             c----------CceEEEEeecccCC
Confidence            2          13689999987654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=93.61  E-value=0.22  Score=34.03  Aligned_cols=99  Identities=15%  Similarity=0.104  Sum_probs=57.0

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC--cceeeeeeeecC
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN--IPSFYGLYLRRG  102 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~--i~~l~~~~~~~~  102 (152)
                      ++.++.|....+|++.     ..+++|.....    ....         .+.+|..++..+..+..  +++.+.....  
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~----~~~~---------~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--   84 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS----RGST---------NLFNEVNILKRIHNKLPLPIPEVVFTGMP--   84 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH----HHHH---------HHHHHHHHHHHHTTSSSSCCCCEEEECCC--
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc----chHH---------HHHHHHHHHHHHHhcCCCCCCceEeecCC--
Confidence            3458899999888763     45788864321    1111         14578888877643332  4444443310  


Q ss_pred             CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhc
Q psy2812         103 GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~  150 (152)
                       .......|+||++++|.++.+..-  .    .++..+...++.|+++
T Consensus        85 -~~~~~~~~~vm~~i~G~~l~~~~~--~----~l~~~~~~~~~~~l~~  125 (304)
T 3sg8_A           85 -SETYQMSFAGFTKIKGVPLTPLLL--N----NLPKQSQNQAAKDLAR  125 (304)
T ss_dssp             -CSSCSCSCEEEECCCCEECCHHHH--H----TSCHHHHHHHHHHHHH
T ss_pred             -CCCCCcceEEEcccCCeECCcccc--c----cCCHHHHHHHHHHHHH
Confidence             011134589999999988865331  1    2666666666666543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=90.93  E-value=0.49  Score=32.96  Aligned_cols=88  Identities=9%  Similarity=0.135  Sum_probs=51.3

Q ss_pred             eEEEEEe-eccceeEEEEEEEc--C----CCCeEEEEEeecCC---C-chhhHHHHHHHhhhhhHHHHHHHHhccCCC--
Q psy2812          22 FKLQELI-GEGTYGEVYWAKDV--E----TGDHVAIKIMENIP---E-NIEEIEEEYLVLKDLSIEEEYLVLKDLSVH--   88 (152)
Q Consensus        22 ~~~~~~l-g~G~~g~V~~~~~~--~----~~~~~a~K~i~~~~---~-~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--   88 (152)
                      ....+.| +.|....+|+....  .    ++..+++|.-....   . ....            +.+|..++..+..+  
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~------------~~~E~~~l~~L~~~~~   89 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYR------------LDHQFEVIRLVGELTD   89 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCC------------HHHHHHHHHHHHHHCC
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhH------------HHHHHHHHHHHhhcCC
Confidence            4456778 88888889988643  0    14567787654321   0 0011            33566666666433  


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHH
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD  124 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~  124 (152)
                      ..+++++......   ...+..|++||+++|.++.+
T Consensus        90 vpvP~v~~~~~~~---~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A           90 VPVPRVRWIETTG---DVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SCCCCEEEEECSS---TTTSSCEEEEECCCCBCCCB
T ss_pred             CCCCcEEEEccCC---CccCCceEEEEecCCCChhh
Confidence            3466777665110   11145789999998876653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=86.71  E-value=2.7  Score=28.74  Aligned_cols=29  Identities=14%  Similarity=0.207  Sum_probs=17.4

Q ss_pred             EEEeeccceeEEEEEEEcCCCCeEEEEEeec
Q psy2812          25 QELIGEGTYGEVYWAKDVETGDHVAIKIMEN   55 (152)
Q Consensus        25 ~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~   55 (152)
                      ++.|+.|..+.+|++..  .+..+++|....
T Consensus        37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~   65 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHR   65 (346)
T ss_dssp             EEECC----CEEEEEEE--TTEEEEEEEECS
T ss_pred             eeeccccccCcEEEEEe--CCCCEEEEecCC
Confidence            45666677888999875  234588888764

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=85.92  E-value=0.067  Score=39.20  Aligned_cols=56  Identities=7%  Similarity=-0.012  Sum_probs=12.2

Q ss_pred             eeEEEEEEEcCCCCeEEE------EEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          33 YGEVYWAKDVETGDHVAI------KIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        33 ~g~V~~~~~~~~~~~~a~------K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      ||.||++........||+      |.........+...         .+.+|..++..+. |||+++.+..-
T Consensus       152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~---------~~~rea~l~~~~~-H~niv~~h~f~  213 (463)
T 3cxl_A          152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLT---------SLVRRATLKENEQ-IPKYEKIHNFK  213 (463)
T ss_dssp             BCCC---------CCBGGGC---------------------------------------------CBCCCEE
T ss_pred             chhhhcccccccCCchhhhhccCccccccccccccccc---------ccccccccccccc-ccccCCCcceE
Confidence            999999987554456777      44332111111111         1446777777777 99998887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-22
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-21
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-19
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-19
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-18
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-18
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-18
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-18
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-17
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-17
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	8e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-16
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-16
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-15
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-15
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-14
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-14
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-14
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-13
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-13
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-12
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-12
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-06

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.2 bits (218), Expect = 2e-22
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 25/136 (18%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLS 74
           D R+ +  ++++G G + EV  A+D  T   VAIK +  + +      +E E  VL  + 
Sbjct: 6   DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 65

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
                        HPNI +   +Y           L+ +M+L +GG + D +        
Sbjct: 66  -------------HPNIVALDDIYE------SGGHLYLIMQLVSGGELFDRIVEKGF--- 103

Query: 135 SLSEDQIAYILYGTVQ 150
             +E   + +++  + 
Sbjct: 104 -YTERDASRLIFQVLD 118

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 5e-22
 Identities = 48/141 (34%), Positives = 65/141 (46%), Gaps = 25/141 (17%)

Query: 11  NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLV 69
           +I S+ DP+ K+   E IG+G  G VY A DV TG  VAI+ M        E I  E LV
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
           +++               +PNI ++   YL        D+LW VME   GGS+TD+V   
Sbjct: 71  MRENK-------------NPNIVNYLDSYL------VGDELWVVMEYLAGGSLTDVVTET 111

Query: 130 KKRGVSLSEDQIAYILYGTVQ 150
                   E QIA +    +Q
Sbjct: 112 CM-----DEGQIAAVCRECLQ 127

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-21
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 24  LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK 83
             +++G G  G+V    +  T +  A+K++++ P+   E+E                +  
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVE----------------LHW 59

Query: 84  DLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAY 143
             S  P+I     +Y           L  VME   GG +   +Q   +   + +E + + 
Sbjct: 60  RASQCPHIVRIVDVY--ENLYAGRKCLLIVMECLDGGELFSRIQ--DRGDQAFTEREASE 115

Query: 144 ILYGTVQ 150
           I+    +
Sbjct: 116 IMKSIGE 122

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.4 bits (208), Expect = 4e-21
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 15/131 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           ++++L E++G G   EV+ A+D+     VA+K++                        E 
Sbjct: 7   DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR--------FRREA 58

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                L+ HP I + Y         P     + VME   G ++ D+V         ++  
Sbjct: 59  QNAAALN-HPAIVAVYDTGEAET--PAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPK 111

Query: 140 QIAYILYGTVQ 150
           +   ++    Q
Sbjct: 112 RAIEVIADACQ 122

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 84.3 bits (208), Expect = 6e-21
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 19/134 (14%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DP   F     IG G++G VY+A+DV   + VAIK M    +   E  ++        I 
Sbjct: 12  DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD--------II 63

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
           +E   L+ L  HPN   + G YL       E   W VME C G +       ++     L
Sbjct: 64  KEVRFLQKLR-HPNTIQYRGCYL------REHTAWLVMEYCLGSASDL----LEVHKKPL 112

Query: 137 SEDQIAYILYGTVQ 150
            E +IA + +G +Q
Sbjct: 113 QEVEIAAVTHGALQ 126

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 7e-21
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 23/135 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIME-NIPENIEEIEEEYLVLKDLSI 75
           +P + +++   +G+G +G+VY A++ ET    A K+++    E +E+   E  +L     
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD- 67

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       HPNI      +        E+ LW ++E C GG+V  +   M +    
Sbjct: 68  ------------HPNIVKLLDAFY------YENNLWILIEFCAGGAVDAV---MLELERP 106

Query: 136 LSEDQIAYILYGTVQ 150
           L+E QI  +   T+ 
Sbjct: 107 LTESQIQVVCKQTLD 121

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 84.3 bits (208), Expect = 9e-21
 Identities = 19/132 (14%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMEN-IPENIEEIEEEYLVLKDLSIEEE 78
           + + + E +G G +G V+   +  TG     K +    P +   ++ E  ++  L     
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH---- 84

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
                    HP + + +  +       ++ ++  ++E  +GG + D    +      +SE
Sbjct: 85  ---------HPKLINLHDAFE------DKYEMVLILEFLSGGELFDR---IAAEDYKMSE 126

Query: 139 DQIAYILYGTVQ 150
            ++   +    +
Sbjct: 127 AEVINYMRQACE 138

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 1e-20
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 14/130 (10%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            +++   IG G+YG     +    G  +  K ++    ++ E E++        +  E  
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELD--YGSMTEAEKQ-------MLVSEVN 55

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L++L  HPNI  +Y   + R        L+ VME C GG +  ++    K    L E+ 
Sbjct: 56  LLRELK-HPNIVRYYDRIIDR----TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 110

Query: 141 IAYILYGTVQ 150
           +  ++     
Sbjct: 111 VLRVMTQLTL 120

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 22/126 (17%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
           K+ + E +G G +G V+   +  +      K ++    +   +++E  +L          
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR------ 59

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
                  H NI   +  +         ++L  + E  +G    D+ + +      L+E +
Sbjct: 60  -------HRNILHLHESFE------SMEELVMIFEFISGL---DIFERINTSAFELNERE 103

Query: 141 IAYILY 146
           I   ++
Sbjct: 104 IVSYVH 109

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 82.0 bits (202), Expect = 5e-20
 Identities = 22/132 (16%), Positives = 54/132 (40%), Gaps = 23/132 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPEN-IEEIEEEYLVLKDLSIEEE 78
           + + + E +G G +G V+   +  TG++ A K +    E+  E + +E   +  L     
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR---- 81

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
                    HP + + +  +       +++++  + E  +GG   +L + +      +SE
Sbjct: 82  ---------HPTLVNLHDAFE------DDNEMVMIYEFMSGG---ELFEKVADEHNKMSE 123

Query: 139 DQIAYILYGTVQ 150
           D+    +    +
Sbjct: 124 DEAVEYMRQVCK 135

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 7e-20
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 23/133 (17%)

Query: 18  PRNK----FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDL 73
           PR K    FK  +++GEG++  V  A+++ T    AIKI+E      E            
Sbjct: 2   PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY------- 54

Query: 74  SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRG 133
            +  E  V+  L  HP     Y  +       ++++L+F +     G +   ++ +    
Sbjct: 55  -VTRERDVMSRLD-HPFFVKLYFTFQ------DDEKLYFGLSYAKNGELLKYIRKIGS-- 104

Query: 134 VSLSEDQIAYILY 146
               E    +   
Sbjct: 105 --FDETCTRFYTA 115

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 79.7 bits (196), Expect = 2e-19
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 12/130 (9%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            ++ +E++G G    V       T    A+KI++         EE   + +  +  +E  
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEVD 61

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +L+ +S HPNI      Y            + V +L   G + D +       V+LSE +
Sbjct: 62  ILRKVSGHPNIIQLKDTYE------TNTFFFLVFDLMKKGELFDYL----TEKVTLSEKE 111

Query: 141 IAYILYGTVQ 150
              I+   ++
Sbjct: 112 TRKIMRALLE 121

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 80.7 bits (198), Expect = 2e-19
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
           ++ ++L   +G G Y EV+ A ++   + V +KI++ + +                I+ E
Sbjct: 34  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK--------------KIKRE 79

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
             +L++L   PNI +   +       P       V E         L Q       +L++
Sbjct: 80  IKILENLRGGPNIITLADIVK----DPVSRTPALVFEHVNNTDFKQLYQ-------TLTD 128

Query: 139 DQIAYILYGTVQ 150
             I + +Y  ++
Sbjct: 129 YDIRFYMYEILK 140

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 3e-19
 Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   KL E +G G +GEV+          VA+K ++    + +    E  ++K L    
Sbjct: 11  PRETLKLVERLGAGQFGEVWMGYY-NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ--- 66

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   Y +         ++ ++ + E    GS+ D ++     G+ L+
Sbjct: 67  ----------HQRLVRLYAVV-------TQEPIYIITEYMENGSLVDFLK--TPSGIKLT 107

Query: 138 EDQIAYILYGTVQ 150
            +++  +     +
Sbjct: 108 INKLLDMAAQIAE 120

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 5e-19
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 25/134 (18%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIE 76
            + F+    +G G  G V+      +G  +A K++  E  P    +I  E  VL + +  
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN-- 62

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                       P I  FYG +        + ++   ME   GGS+  +++   +    +
Sbjct: 63  -----------SPYIVGFYGAFY------SDGEISICMEHMDGGSLDQVLKKAGR----I 101

Query: 137 SEDQIAYILYGTVQ 150
            E  +  +    ++
Sbjct: 102 PEQILGKVSIAVIK 115

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.8 bits (191), Expect = 1e-18
 Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 21/140 (15%)

Query: 11  NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVL 70
           N D     R    ++  +G G YGEVY     +    VA+K ++     +EE  +E  V+
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
           K++              HPN+    G+         E   + + E  T G++ D +   +
Sbjct: 68  KEIK-------------HPNLVQLLGVCT------REPPFYIITEFMTYGNLLDYL--RE 106

Query: 131 KRGVSLSEDQIAYILYGTVQ 150
                +S   + Y+      
Sbjct: 107 CNRQEVSAVVLLYMATQISS 126

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 2e-18
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 17/135 (12%)

Query: 16  RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSI 75
           R     +   ++IG G++G VY AK  ++G+ VAIK +     +      E  +++ L  
Sbjct: 16  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ---DKRFKNRELQIMRKLD- 71

Query: 76  EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVS 135
                       H NI      +   G + +E  L  V++              + +  +
Sbjct: 72  ------------HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ-T 118

Query: 136 LSEDQIAYILYGTVQ 150
           L    +   +Y   +
Sbjct: 119 LPVIYVKLYMYQLFR 133

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.9 bits (189), Expect = 2e-18
 Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           P  +  + + IG G++G VY  K       VA+K++       ++++           + 
Sbjct: 6   PDGQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA---------FKN 53

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
           E  VL+    H NI  F G            QL  V + C G S+   +  ++ +     
Sbjct: 54  EVGVLRKTR-HVNILLFMGYS-------TAPQLAIVTQWCEGSSLYHHLHIIETK---FE 102

Query: 138 EDQIAYILYGTVQ 150
             ++  I   T Q
Sbjct: 103 MIKLIDIARQTAQ 115

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 2e-18
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
              + KL + IG+G +G+V        G+ VA+K ++N     +    E  V+  L    
Sbjct: 5   NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQLR--- 58

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H N+    G+ +      E+  L+ V E    GS+ D ++   +    L 
Sbjct: 59  ----------HSNLVQLLGVIVE-----EKGGLYIVTEYMAKGSLVDYLR--SRGRSVLG 101

Query: 138 EDQIAYILYGTVQ 150
            D +        +
Sbjct: 102 GDCLLKFSLDVCE 114

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 4e-18
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 25/133 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEE 77
             + L + +GEG YGEV  A +  T + VA+KI+  +   +  E I++E  + K L+   
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--- 61

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H N+  FYG           +  +  +E C+GG + D +    +  + + 
Sbjct: 62  ----------HENVVKFYGHRRE------GNIQYLFLEYCSGGELFDRI----EPDIGMP 101

Query: 138 EDQIAYILYGTVQ 150
           E       +  + 
Sbjct: 102 EPDAQRFFHQLMA 114

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 6e-18
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 18/131 (13%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F L +++G+G++G+V+ A+  +T    AIK ++     +++  E  +V        E 
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMV--------EK 53

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            VL     HP +   +  +        ++ L+FVME   GG +   +Q   K        
Sbjct: 54  RVLSLAWEHPFLTHMFCTFQ------TKENLFFVMEYLNGGDLMYHIQSCHK----FDLS 103

Query: 140 QIAYILYGTVQ 150
           +  +     + 
Sbjct: 104 RATFYAAEIIL 114

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 7e-18
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 16/134 (11%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           +  + +   E +G G +  V   ++  TG   A K +          +     +    IE
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-----KKRRTKSSRRGVSREDIE 61

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
            E  +LK++  HPN+ + + +Y        +  +  ++EL  GG + D          SL
Sbjct: 62  REVSILKEIQ-HPNVITLHEVYE------NKTDVILILELVAGGELFD----FLAEKESL 110

Query: 137 SEDQIAYILYGTVQ 150
           +E++    L   + 
Sbjct: 111 TEEEATEFLKQILN 124

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           +++++  L+G G +G VY    V     VAIK +E      + I +   +     +  E 
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEV 58

Query: 80  LVLKDLS-VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
           ++LK +S     +      +         D    ++E        DL   + +RG +L E
Sbjct: 59  VLLKKVSSGFSGVIRLLDWF------ERPDSFVLILERPEPVQ--DLFDFITERG-ALQE 109

Query: 139 DQIAYILYGTVQ 150
           +      +  ++
Sbjct: 110 ELARSFFWQVLE 121

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.5 bits (185), Expect = 2e-17
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 12/128 (9%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N F +  +IG G +GEVY  +  +TG   A+K ++     +++ E   L       E   
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 57

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           L L      P I      +         D+L F+++L  GG +   +        +    
Sbjct: 58  LSLVSTGDCPFIVCMSYAFH------TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 111

Query: 140 QIAYILYG 147
             A I+ G
Sbjct: 112 YAAEIILG 119

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.2 bits (182), Expect = 2e-17
 Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 19/131 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F++   +G+G +G VY A++ ++   +A+K++         +E +        +  E 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ--------LRREV 57

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +   L  HPNI   YG +       +  +++ ++E    G+V   +Q + K      E 
Sbjct: 58  EIQSHLR-HPNILRLYGYFH------DATRVYLILEYAPLGTVYRELQKLSK----FDEQ 106

Query: 140 QIAYILYGTVQ 150
           + A  +     
Sbjct: 107 RTATYITELAN 117

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 2e-17
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           DP++     + +G G +G V + K       VAIK+++    + +E  EE  V+ +LS  
Sbjct: 2   DPKD-LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-- 57

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
                      H  +   YG+        ++  ++ + E    G + + ++ M+ R    
Sbjct: 58  -----------HEKLVQLYGVCT------KQRPIFIITEYMANGCLLNYLREMRHR---F 97

Query: 137 SEDQIAYILYGTVQ 150
              Q+  +     +
Sbjct: 98  QTQQLLEMCKDVCE 111

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 6e-17
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 28/138 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH---VAIKIMENI--PENIEEIEEEYLVLKD 72
            R + +L   IGEG +G+V+    +   +    VAIK  +N       E+  +E L ++ 
Sbjct: 5   QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 64

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
                          HP+I    G+         E+ +W +MELCT G +      ++ R
Sbjct: 65  FD-------------HPHIVKLIGVI-------TENPVWIIMELCTLGELRSF---LQVR 101

Query: 133 GVSLSEDQIAYILYGTVQ 150
             SL    +    Y    
Sbjct: 102 KYSLDLASLILYAYQLST 119

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 7e-17
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 35/152 (23%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           PRN+    + +G G +G+V  A        +    VA+K+++  P       E       
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTEREA------ 72

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
             +  E  VL  L  H NI +  G                + E C  G + + ++  +  
Sbjct: 73  --LMSELKVLSYLGNHMNIVNLLGACT------IGGPTLVITEYCCYGDLLNFLRRKRDS 124

Query: 133 GVS--------------LSEDQIAYILYGTVQ 150
            +               L  + +    Y   +
Sbjct: 125 FICSKTSPAIMEDDELALDLEDLLSFSYQVAK 156

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 7e-17
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 16/132 (12%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
           R  ++  + +G G YG V  A D  TG  VAIK +    ++    +             E
Sbjct: 17  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR---------AYRE 67

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
             +LK +  H N+     ++       +    + VM    G  +  L++  K     L E
Sbjct: 68  LRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK-----LGE 120

Query: 139 DQIAYILYGTVQ 150
           D+I +++Y  ++
Sbjct: 121 DRIQFLVYQMLK 132

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 8e-17
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 28/141 (19%)

Query: 15  LRDPRNKFKLQEL-IGEGTYGEVYWAKDVETGDH--VAIKIM--ENIPENIEEIEEEYLV 69
           L   R+   + ++ +G G +G V             VAIK++       + EE+  E  +
Sbjct: 3   LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 62

Query: 70  LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
           +  L              +P I    G+        + + L  VME+  GG +   + G 
Sbjct: 63  MHQLD-------------NPYIVRLIGVC-------QAEALMLVMEMAGGGPLHKFLVGK 102

Query: 130 KKRGVSLSEDQIAYILYGTVQ 150
           ++    +    +A +L+    
Sbjct: 103 REE---IPVSNVAELLHQVSM 120

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 1e-16
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 24/131 (18%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGD-----HVAIKIMENIPENIEEIEEEYLVLKD 72
           PR   +  +++G G +G+V  A             VA+K+++   ++ E           
Sbjct: 35  PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA-------- 86

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
             +  E  ++  L  H NI +  G             ++ + E C  G + +    ++ +
Sbjct: 87  --LMSELKMMTQLGSHENIVNLLGACT------LSGPIYLIFEYCCYGDLLNY---LRSK 135

Query: 133 GVSLSEDQIAY 143
               SED+I Y
Sbjct: 136 REKFSEDEIEY 146

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-16
 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 16/129 (12%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
            K    IG G++  VY   D ET   VA   +++      E +           +EE  +
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------FKEEAEM 61

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           LK L  HPNI  FY  +        +  +  V EL T G++   +    KR   +    +
Sbjct: 62  LKGLQ-HPNIVRFYDSW--ESTVKGKKCIVLVTELMTSGTLKTYL----KRFKVMKIKVL 114

Query: 142 AYILYGTVQ 150
                  ++
Sbjct: 115 RSWCRQILK 123

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 3e-16
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 23/132 (17%)

Query: 19  RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
            ++    + IG G +G V+        D VAIK +     + E+  EE  V+  LS    
Sbjct: 4   PSELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS---- 58

Query: 79  YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
                    HP +   YG+ L      E+  +  V E    G ++D    ++ +    + 
Sbjct: 59  ---------HPKLVQLYGVCL------EQAPICLVFEFMEHGCLSDY---LRTQRGLFAA 100

Query: 139 DQIAYILYGTVQ 150
           + +  +     +
Sbjct: 101 ETLLGMCLDVCE 112

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 4e-16
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 17/131 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            +++  + IG G  G V  A D     +VAIK +    +N    +             E 
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR---------AYREL 67

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           +++K ++ H NI S   ++  +    E   ++ VMEL        +   +         +
Sbjct: 68  VLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-------DHE 119

Query: 140 QIAYILYGTVQ 150
           +++Y+LY  + 
Sbjct: 120 RMSYLLYQMLC 130

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-15
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 26/145 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
             N  K Q++IGEG +G+V  A+  + G  +   I        ++   ++          
Sbjct: 8   DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA--------G 59

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQG--------- 128
           E  VL  L  HPNI +  G             L+  +E    G++ D ++          
Sbjct: 60  ELEVLCKLGHHPNIINLLGACEH------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 113

Query: 129 ---MKKRGVSLSEDQIAYILYGTVQ 150
                    +LS  Q+ +      +
Sbjct: 114 FAIANSTASTLSSQQLLHFAADVAR 138

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 1e-15
 Identities = 27/152 (17%), Positives = 61/152 (40%), Gaps = 35/152 (23%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH-------VAIKIMENIPENIEEIEEEYLVL 70
           PR++  L + +GEG +G+V  A+ +            VA+K+++   +  E+   + +  
Sbjct: 11  PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDLI-- 66

Query: 71  KDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
                  E  ++K +  H NI +  G         ++  L+ ++E  + G++ + +Q  +
Sbjct: 67  ------SEMEMMKMIGKHKNIINLLGACT------QDGPLYVIVEYASKGNLREYLQARR 114

Query: 131 KRGVS------------LSEDQIAYILYGTVQ 150
             G+             LS   +    Y   +
Sbjct: 115 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 146

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-15
 Identities = 29/133 (21%), Positives = 45/133 (33%), Gaps = 22/133 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLSIEE 77
            ++     IGEG YG V  A D      VAIK +         +    E  +L       
Sbjct: 8   PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR--- 64

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H NI     +   R    E+ +  +++    G  +  L++        LS
Sbjct: 65  ----------HENIIGINDII--RAPTIEQMKDVYLVTHLMGADLYKLLKTQH-----LS 107

Query: 138 EDQIAYILYGTVQ 150
            D I Y LY  ++
Sbjct: 108 NDHICYFLYQILR 120

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 22/131 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
               LQE IG+G +GEV+  K    G+ VA+KI  +  E     E E      L      
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLR----- 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
                   H NI  F     +  G   +  LW V +    GS+ D +         ++ +
Sbjct: 56  --------HENILGFIAADNKDNGTWTQ--LWLVSDYHEHGSLFDYLNRYT-----VTVE 100

Query: 140 QIAYILYGTVQ 150
            +  +   T  
Sbjct: 101 GMIKLALSTAS 111

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 2e-15
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 23/133 (17%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEE 77
           PR   +L+  +G+G +GEV+      T   VAIK ++    + E   +E  V+K L    
Sbjct: 15  PRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLR--- 70

Query: 78  EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLS 137
                     H  +   Y +         E+ ++ V E  + GS+ D ++G  + G  L 
Sbjct: 71  ----------HEKLVQLYAVV-------SEEPIYIVTEYMSKGSLLDFLKG--ETGKYLR 111

Query: 138 EDQIAYILYGTVQ 150
             Q+  +      
Sbjct: 112 LPQLVDMAAQIAS 124

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (167), Expect = 3e-15
 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 16/136 (11%)

Query: 17  DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIE 76
           D  +K++    IG+GT+GEV+ A+  +TG  VA+K +  + EN +E           +  
Sbjct: 7   DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPI-------TAL 57

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGG--QPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
            E  +L+ L  H N+ +   +   +       +  ++ V + C       L   +    V
Sbjct: 58  REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD----LAGLLSNVLV 112

Query: 135 SLSEDQIAYILYGTVQ 150
             +  +I  ++   + 
Sbjct: 113 KFTLSEIKRVMQMLLN 128

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 5e-15
 Identities = 26/131 (19%), Positives = 56/131 (42%), Gaps = 16/131 (12%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            +++    +G G YG V  A D +TG  VA+K +    ++I   +             E 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---------TYREL 68

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK +  H N+     ++       EE    +++    G  + ++V+  K     L++D
Sbjct: 69  RLLKHMK-HENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDD 121

Query: 140 QIAYILYGTVQ 150
            + +++Y  ++
Sbjct: 122 HVQFLIYQILR 132

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.5 bits (164), Expect = 8e-15
 Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 27/153 (17%)

Query: 3   YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDH---VAIKIM--ENIP 57
           +   +  +   +     +  K++++IG G +GEV        G     VAIK +      
Sbjct: 9   FEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68

Query: 58  ENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELC 117
           +   +   E  ++                 HPN+    G+        +   +  + E  
Sbjct: 69  KQRRDFLSEASIMGQFD-------------HPNVIHLEGVVT------KSTPVMIITEFM 109

Query: 118 TGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
             GS   L   +++     +  Q+  +L G   
Sbjct: 110 ENGS---LDSFLRQNDGQFTVIQLVGMLRGIAA 139

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 1e-14
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 26  ELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL 85
           + +GEG +  VY A+D  T   VAIK ++    +  E ++        +   E  +L++L
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINR----TALREIKLLQEL 57

Query: 86  SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
           S HPNI      +        +  +  V +             +K   + L+   I   +
Sbjct: 58  S-HPNIIGLLDAFG------HKSNISLVFDFMETDLEVI----IKDNSLVLTPSHIKAYM 106

Query: 146 YGTVQ 150
             T+Q
Sbjct: 107 LMTLQ 111

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 1e-14
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 26/130 (20%)

Query: 12  IDSLRDPRNKFKLQELIGEGTYGEVYWAK-----DVETGDHVAIKIM--ENIPENIEEIE 64
           + SL  PRN  +    IGEG +G V+ A+       E    VA+K++  E   +   + +
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64

Query: 65  EEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
            E  ++ +               +PNI    G+            +  + E    G + +
Sbjct: 65  REAALMAEFD-------------NPNIVKLLGVC------AVGKPMCLLFEYMAYGDLNE 105

Query: 125 LVQGMKKRGV 134
            ++ M    V
Sbjct: 106 FLRSMSPHTV 115

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 3e-14
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 19/131 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N F   +L+G+GT+G+V   ++  TG + A+KI+       ++               E 
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAH--------TVTES 56

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            VL++   HP + +    +         D+L FVME   GG +   +     R    +E+
Sbjct: 57  RVLQNTR-HPFLTALKYAF------QTHDRLCFVMEYANGGELFFHL----SRERVFTEE 105

Query: 140 QIAYILYGTVQ 150
           +  +     V 
Sbjct: 106 RARFYGAEIVS 116

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 3e-14
 Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 22/136 (16%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH---VAIKIMENIPENIEEIEEEYLVLKDLS 74
                +L E +G+G++G V   +          VA+K ++    +  E  ++        
Sbjct: 6   GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD-------- 57

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E   +  L  H N+   YG+            +  V EL   GS+ D    ++K   
Sbjct: 58  FIREVNAMHSLD-HRNLIRLYGVV-------LTPPMKMVTELAPLGSLLDR---LRKHQG 106

Query: 135 SLSEDQIAYILYGTVQ 150
                 ++       +
Sbjct: 107 HFLLGTLSRYAVQVAE 122

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-14
 Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 28/139 (20%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKDVETGDH----VAIKIM--ENIPENIEEIEEEYLVLK 71
             +    Q++IG G +GEVY      +       VAIK +      +   +   E  ++ 
Sbjct: 5   HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMG 64

Query: 72  DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
             S             H NI    G+        +   +  + E    G++      +++
Sbjct: 65  QFS-------------HHNIIRLEGVI------SKYKPMMIITEYMENGALDKF---LRE 102

Query: 132 RGVSLSEDQIAYILYGTVQ 150
           +    S  Q+  +L G   
Sbjct: 103 KDGEFSVLQLVGMLRGIAA 121

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.5 bits (159), Expect = 5e-14
 Identities = 22/127 (17%), Positives = 55/127 (43%), Gaps = 15/127 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             F++   +G G++G V+  +    G + A+K+++       +  E           +E 
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEH--------TNDER 55

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
           L+L  ++ HP I   +G +       +  Q++ +M+   GG +  L++  ++    +++ 
Sbjct: 56  LMLSIVT-HPFIIRMWGTF------QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF 108

Query: 140 QIAYILY 146
             A +  
Sbjct: 109 YAAEVCL 115

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.5 bits (156), Expect = 9e-14
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 23/131 (17%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           N+++L   IG G++G++Y   D+  G+ VAIK+       ++    +        +  E 
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQ--------LHIES 53

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            + K +     IP+            E D    VMEL        L           S  
Sbjct: 54  KIYKMMQGGVGIPTIRWCG------AEGDYNVMVMELLGPS----LEDLFNFCSRKFSLK 103

Query: 140 QIAYILYGTVQ 150
            +  +    + 
Sbjct: 104 TVLLLADQMIS 114

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 1e-13
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 24/136 (17%)

Query: 18  PRNKFKLQE-LIGEGTYGEVYWA--KDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLS 74
            R    L++  +G G +G V     +  +    VA+KI++N   +    +E         
Sbjct: 4   DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE--------- 54

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
           +  E  V++ L  +P I    G+        E +    VME+   G +   +Q  +    
Sbjct: 55  LLAEANVMQQLD-NPYIVRMIGIC-------EAESWMLVMEMAELGPLNKYLQQNRH--- 103

Query: 135 SLSEDQIAYILYGTVQ 150
            + +  I  +++    
Sbjct: 104 -VKDKNIIELVHQVSM 118

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 2e-13
 Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 28/144 (19%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKD-----VETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
            R K  +   +G+G++G VY          E    VAIK +       E IE        
Sbjct: 18  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-------- 69

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
                E  V+K+ +   ++    G+  +            +MEL T G +   ++ ++  
Sbjct: 70  --FLNEASVMKEFN-CHHVVRLLGVVSQ------GQPTLVIMELMTRGDLKSYLRSLRPA 120

Query: 133 G------VSLSEDQIAYILYGTVQ 150
                     S  ++  +      
Sbjct: 121 MANNPVLAPPSLSKMIQMAGEIAD 144

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 4e-13
 Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIM--ENIPENIEEIEEEYLVLKDLS 74
             F+L +++G G YG+V+  + +   +TG   A+K++    I +  +  E          
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH--------- 74

Query: 75  IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGV 134
              E  VL+ +   P + + +  +        E +L  +++   GG +   +   ++   
Sbjct: 75  TRTERQVLEHIRQSPFLVTLHYAFQ------TETKLHLILDYINGGELFTHLSQRERFTE 128

Query: 135 SLSEDQIAYILYG 147
              +  +  I+  
Sbjct: 129 HEVQIYVGEIVLA 141

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.1 bits (152), Expect = 4e-13
 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 13  DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           +  +D   ++ L   +G G +  V+ AKD+    HVA+KI+       E  E+E  +L+ 
Sbjct: 8   EPYKD--ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
           ++  +     +D     +I      +  +   P    +  V E+        L    K  
Sbjct: 66  VNDAD--NTKEDSMGANHILKLLDHFNHK--GPNGVHVVMVFEVL---GENLLALIKKYE 118

Query: 133 GVSLSEDQIAYILYGTVQ 150
              +    +  I    + 
Sbjct: 119 HRGIPLIYVKQISKQLLL 136

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 8e-13
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 16/134 (11%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGD-HVAIKIMENIPENIEEIEEEYLVLKDLSIEEE 78
            +++    IGEG YG+V+ A+D++ G   VA+K +      ++  EE       LS   E
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-----RVQTGEEG----MPLSTIRE 57

Query: 79  YLVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
             VL+ L    HPN+   + +         E +L  V E       T L    K     +
Sbjct: 58  VAVLRHLETFEHPNVVRLFDVCT-VSRTDRETKLTLVFEHVDQDLTTYL---DKVPEPGV 113

Query: 137 SEDQIAYILYGTVQ 150
             + I  +++  ++
Sbjct: 114 PTETIKDMMFQLLR 127

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 1e-12
 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 21  KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYL 80
            F+  E IGEGTYG VY A++  TG+ VA+K +    E                   E  
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST---------AIREIS 53

Query: 81  VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
           +LK+L+ HPNI     +         E++L+ V E         +          +    
Sbjct: 54  LLKELN-HPNIVKLLDVIH------TENKLYLVFEFLHQDLKKFMDASALTG---IPLPL 103

Query: 141 IAYILYGTVQ 150
           I   L+  +Q
Sbjct: 104 IKSYLFQLLQ 113

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 1e-12
 Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 32/150 (21%)

Query: 18  PRNKFKLQELIGEGTYGEVYWAKD-----VETGDHVAIKIMENIPENIEEIEEEYLVLKD 72
           PR++ KL + +G G +G+V  A         T   VA+K+++    + E           
Sbjct: 11  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-------- 62

Query: 73  LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
             +  E  +L  +  H N+ +  G   +         L  ++E C  G+++  ++  +  
Sbjct: 63  --LMSELKILIHIGHHLNVVNLLGACTK-----PGGPLMVIVEFCKFGNLSTYLRSKRNE 115

Query: 133 GVS------------LSEDQIAYILYGTVQ 150
            V             L+ + +    +   +
Sbjct: 116 FVPYKVAPEDLYKDFLTLEHLICYSFQVAK 145

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 61.0 bits (147), Expect = 2e-12
 Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 23/127 (18%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
             +K+   IGEG++G ++   ++     VAIK      +  +             + +EY
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ-------------LRDEY 51

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
              K L+    IP+ Y          E      V++L        L       G   S  
Sbjct: 52  RTYKLLAGCTGIPNVYYFG------QEGLHNVLVIDLLGPSLEDLL----DLCGRKFSVK 101

Query: 140 QIAYILY 146
            +A    
Sbjct: 102 TVAMAAK 108

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 2e-12
 Identities = 21/129 (16%), Positives = 49/129 (37%), Gaps = 17/129 (13%)

Query: 22  FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLV 81
           FK  +++G G +G VY    +  G+ V I +       I+E+ E      +  I +E  V
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA------IKELREATSPKANKEILDEAYV 64

Query: 82  LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
           +  +  +P++    G+            +  + +L   G    L+  +++   ++    +
Sbjct: 65  MASVD-NPHVCRLLGIC-------LTSTVQLITQLMPFGC---LLDYVREHKDNIGSQYL 113

Query: 142 AYILYGTVQ 150
                   +
Sbjct: 114 LNWCVQIAK 122

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 4e-12
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 36/142 (25%)

Query: 9   HINIDSLRD-----------PRNKFKLQ--ELIGEGTYGEVYWAKDVE---TGDHVAIKI 52
           HI++ +L               +   +   E+IG G +G VY    ++      H A+K 
Sbjct: 3   HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 62

Query: 53  MENI--PENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQL 110
           +  I     + +   E +++KD S             HPN+ S  G+ LR      E   
Sbjct: 63  LNRITDIGEVSQFLTEGIIMKDFS-------------HPNVLSLLGICLR-----SEGSP 104

Query: 111 WFVMELCTGGSVTDLVQGMKKR 132
             V+     G + + ++     
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHN 126

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.2 bits (142), Expect = 7e-12
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 16/98 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            K++  E IGEGTYG V+ AK+ ET + VA+K +  + ++ E +              E 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSS--------ALREI 52

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELC 117
            +LK+L  H NI   + +         + +L  V E C
Sbjct: 53  CLLKELK-HKNIVRLHDVL------HSDKKLTLVFEFC 83

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 19/132 (14%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
           ++F   + +G G++G V   K  E+G+H A+KI++   + + ++++    L       E 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD--KQKVVKLKQIEHTLN------EK 92

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +L+ ++  P +      +       +   L+ VME   GG +   ++ + +     SE 
Sbjct: 93  RILQAVN-FPFLVKLEFSF------KDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEP 141

Query: 140 QIAYILYGTVQV 151
              +     V  
Sbjct: 142 HARFYAAQIVLT 153

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.8 bits (136), Expect = 5e-11
 Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 21/131 (16%)

Query: 20  NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEY 79
            K+   E IGEGTYG VY A++   G+  A+K +    E+                  E 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPST---------TIREI 51

Query: 80  LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
            +LK+L  H NI   Y +         + +L  V E        DL + +      L   
Sbjct: 52  SILKELK-HSNIVKLYDVI------HTKKRLVLVFEHLDQ----DLKKLLDVCEGGLESV 100

Query: 140 QIAYILYGTVQ 150
                L   + 
Sbjct: 101 TAKSFLLQLLN 111

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 41.7 bits (97), Expect = 7e-06
 Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 19/116 (16%)

Query: 24  LQELIGEGTYGEVYWAKDVETGDHVAIKIM-------ENIPENIEEIEEEYLVLKDLSIE 76
           + +L+GEG    V+     E      +K         + + E  +  +  + VL   S  
Sbjct: 4   IGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 77  EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
            E+  L+ L     +P  Y            +    +MEL     +  +       
Sbjct: 63  NEFRALQKLQ-GLAVPKVYAW----------EGNAVLMELIDAKELYRVRVENPDE 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.94
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.92
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.91
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.91
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.9
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.9
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.89
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.89
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.89
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.89
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.89
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.88
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.88
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.88
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.88
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.88
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.88
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.88
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.86
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.85
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.85
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.85
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.85
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.85
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.85
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.85
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.85
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.84
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.84
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.83
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.83
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.83
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.83
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.82
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.81
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.81
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.81
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.8
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.79
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.77
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.59
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.25
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.69
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	89.15
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	88.8

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4e-26  Score=154.74  Aligned_cols=119  Identities=22%  Similarity=0.389  Sum_probs=98.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+|+.||+|.+............         +.+|+.+++.++ ||||+++++++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~---------~~~E~~il~~l~-HpnIv~~~~~~   72 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM---------LVSEVNLLRELK-HPNIVRYYDRI   72 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHH---------HHHHHHHTTSCC-CTTBCCEEEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHH---------HHHHHHHHHHCC-CCCEeeEEEEE
Confidence            36899999999999999999999999999999999865443322211         568999999998 99999999988


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .+    +..+.+|+|||||+||+|.++++.....+..+++..++.++.|+++|
T Consensus        73 ~~----~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~a  121 (269)
T d2java1          73 ID----RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA  121 (269)
T ss_dssp             EC--------CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             Ee----CCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence            53    34567999999999999999997665555679999999999999987

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.9e-25  Score=151.56  Aligned_cols=119  Identities=22%  Similarity=0.367  Sum_probs=98.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      +..+.|++.+.||+|+||.||+|.++.+|+.||+|++.+.............     .+.+|+.+++.++ ||||+++++
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~-----~~~~E~~il~~l~-HpnIv~~~~   80 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-----DIEREVSILKEIQ-HPNVITLHE   80 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHH-----HHHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHH-----HHHHHHHHHHhCC-CCCCCcEEE
Confidence            3456799999999999999999999999999999999765432211100000     1568999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ++++.+|+|||||+||+|.++++..    ..+++..++.++.|+++|
T Consensus        81 ~~------~~~~~~~iv~E~~~gg~L~~~i~~~----~~l~~~~~~~~~~qi~~a  125 (293)
T d1jksa_          81 VY------ENKTDVILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNG  125 (293)
T ss_dssp             EE------ECSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEEcCCCccccchhccc----cccchhHHHHHHHHHHHH
Confidence            99      7889999999999999999999532    259999999999999987

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3e-25  Score=150.47  Aligned_cols=112  Identities=28%  Similarity=0.450  Sum_probs=94.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+++.+|+|.+.......  ...        .+.+|+.+++.++ ||||+++++++
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~--------~~~~Ei~~l~~l~-HpnIv~~~~~~   72 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPE--------NIKKEICINKMLN-HENVVKFYGHR   72 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------------CHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch--HHH--------HHHHHHHHHHhCC-CCCEeeEeeee
Confidence            468999999999999999999999999999999997543211  111        1558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.+|+|||||+||+|.++++.    +..+++..++.++.|+++|
T Consensus        73 ------~~~~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~i~~qi~~a  115 (271)
T d1nvra_          73 ------REGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAG  115 (271)
T ss_dssp             ------EETTEEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHH
T ss_pred             ------ccCceeEEEEeccCCCcHHHHHhc----CCCCCHHHHHHHHHHHHHH
Confidence                  678899999999999999999842    2359999999999999987

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=7.3e-25  Score=150.99  Aligned_cols=114  Identities=27%  Similarity=0.497  Sum_probs=94.5

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...+.|++.+.||+|+||.||+|.++.+++.||+|.+.+.......  .        .+.+|+.+++.++ ||||+++++
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~--~--------~~~~Ei~il~~l~-HpnIv~l~~   74 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--G--------SMENEIAVLHKIK-HPNIVALDD   74 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC--------------------CHHHHHHHTCC-CTTBCCEEE
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHH--H--------HHHHHHHHHHhCC-CCCCCcEEE
Confidence            3456799999999999999999999999999999999754322111  1        1457999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ++++.+|+|||||+||+|.+++..    +..+++..++.++.||++|
T Consensus        75 ~~------~~~~~~~lvmE~~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~a  119 (307)
T d1a06a_          75 IY------ESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDA  119 (307)
T ss_dssp             EE------ECSSEEEEEECCCCSCBHHHHHHT----CSCCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEeccCCCcHHHhhhc----ccCCCHHHHHHHHHHHHHH
Confidence            99      788999999999999999999942    2369999999999999987

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-24  Score=148.74  Aligned_cols=114  Identities=28%  Similarity=0.538  Sum_probs=96.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ++.+.|++++.||+|+||.||+|.++.++..+|+|.+.......  ..         .+.+|+.+++.++ ||||+++++
T Consensus         9 ~p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~---------~~~~E~~il~~l~-HpnIv~l~~   76 (288)
T d2jfla1           9 NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LE---------DYMVEIDILASCD-HPNIVKLLD   76 (288)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGG--GG---------GTHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CcccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHH--HH---------HHHHHHHHHHhCC-CCCCCeEEE
Confidence            45678999999999999999999999999999999997543211  11         1558999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ..++.+|+|||||+||+|.+++...   +..+++..++.++.||++|
T Consensus        77 ~~------~~~~~~~lvmEy~~~g~L~~~~~~~---~~~l~e~~~~~i~~qi~~g  122 (288)
T d2jfla1          77 AF------YYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDA  122 (288)
T ss_dssp             EE------EETTEEEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHH
T ss_pred             EE------eeCCeEEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHH
Confidence            99      6788999999999999999988532   2359999999999999987

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.4e-24  Score=149.25  Aligned_cols=112  Identities=16%  Similarity=0.268  Sum_probs=96.2

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||+|.++.+++.||+|.++....  .. .         .+.+|+.+++.++ ||||++++++
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~--~~-~---------~~~~Ei~il~~l~-HpnIv~~~~~   69 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQ-V---------LVKKEISILNIAR-HRNILHLHES   69 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH--HH-H---------HHHHHHHHHHHSC-CTTBCCEEEE
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc--cH-H---------HHHHHHHHHHhCC-CCCCCeEEEE
Confidence            45789999999999999999999999999999999975321  11 1         1457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      +.++.+|+|||||+||+|.++++   ..+..+++..++.++.||++|
T Consensus        70 ~------~~~~~~~lvmE~~~gg~L~~~i~---~~~~~l~e~~~~~i~~qi~~a  114 (321)
T d1tkia_          70 F------ESMEELVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEA  114 (321)
T ss_dssp             E------EETTEEEEEECCCCCCBHHHHHT---SSSCCCCHHHHHHHHHHHHHH
T ss_pred             E------EECCEEEEEEecCCCCcHHHHHH---hcCCCCCHHHHHHHHHHHHHH
Confidence            9      77889999999999999999984   333369999999999999987

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=1.5e-24  Score=148.16  Aligned_cols=120  Identities=24%  Similarity=0.386  Sum_probs=102.6

Q ss_pred             cccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCC
Q psy2812          11 NIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPN   90 (152)
Q Consensus        11 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~   90 (152)
                      +++.+..+.++|++.+.||+|+||.||+|.++.+++.||+|.++......+.            +.+|+.+++.++ |||
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~------------~~~E~~il~~l~-Hpn   74 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE------------FLKEAAVMKEIK-HPN   74 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHH------------HHHHHHHHHHCC-CTT
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHH------------HHHHHHHHHhCC-CCC
Confidence            4456778889999999999999999999999989999999998754433221            457999999998 999


Q ss_pred             cceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          91 IPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        91 i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |+++++++      ...+.++++||||++|+|.+++..  .....+++..++.++.||++|
T Consensus        75 Iv~~~~~~------~~~~~~~iv~E~~~~g~l~~~l~~--~~~~~~~~~~~~~i~~qi~~g  127 (287)
T d1opja_          75 LVQLLGVC------TREPPFYIITEFMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSA  127 (287)
T ss_dssp             BCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHH--SCTTTSCHHHHHHHHHHHHHH
T ss_pred             EecCCccE------eeCCeeEEEeecccCcchHHHhhh--ccccchHHHHHHHHHHHHHHH
Confidence            99999999      678889999999999999999853  223469999999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=4.9e-24  Score=144.92  Aligned_cols=118  Identities=25%  Similarity=0.368  Sum_probs=98.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCch---hhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENI---EEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~---~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++.+.....   ........     .+.+|+.+++.+..||||++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~-----~~~~E~~~l~~l~~hpnIv~~~   76 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE-----ATLKEVDILRKVSGHPNIIQLK   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHH-----HHHHHHHHHHHHTTCTTBCCEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHH-----HHHHHHHHHHHhcCCCCeEEEE
Confidence            478999999999999999999999999999999998654322   11111111     1568999999997799999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      .+++++|||||||+||+|.++++.   . ..+++..++.++.||++|
T Consensus        77 ~~~------~~~~~~~ivmE~~~~g~L~~~l~~---~-~~l~e~~~~~~~~qi~~a  122 (277)
T d1phka_          77 DTY------ETNTFFFLVFDLMKKGELFDYLTE---K-VTLSEKETRKIMRALLEV  122 (277)
T ss_dssp             EEE------ECSSEEEEEEECCTTCBHHHHHHH---H-SSCCHHHHHHHHHHHHHH
T ss_pred             eec------ccCcceEEEEEcCCCchHHHHHHh---c-CCCCHHHHHHHHHHHHHH
Confidence            999      788999999999999999999953   2 259999999999999987

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.8e-24  Score=150.03  Aligned_cols=114  Identities=21%  Similarity=0.327  Sum_probs=97.2

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||+|.++.+++.||+|.++......  ...        .+.+|+.+++.++ ||||+++++
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~--------~~~~Ei~il~~l~-HpnIv~l~~   71 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA--IRN--------QIIRELQVLHECN-SPYIVGFYG   71 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTT--HHH--------HHHHHGGGGGGCC-CTTBCCEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHH--HHH--------HHHHHHHHHHhCC-CCCCCcEEE
Confidence            45679999999999999999999999999999999997543221  111        1558999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      .+++++|+||||++||+|.+++...    ..+++..++.++.|+++|
T Consensus        72 ~~------~~~~~~~iVmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qil~a  116 (322)
T d1s9ja_          72 AF------YSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKG  116 (322)
T ss_dssp             EE------ECSSEEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEEcCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHH
Confidence            99      7888999999999999999999532    249999999999999987

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-24  Score=146.22  Aligned_cols=114  Identities=21%  Similarity=0.437  Sum_probs=95.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.++.+++.+|+|.+.+..........        .+.+|+.+++.++ ||||+++++++
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~--------~~~~E~~il~~l~-hpnIv~~~~~~   75 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--------QLRREVEIQSHLR-HPNILRLYGYF   75 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHH--------HHHHHHHHHHhcC-CCCCCeEEEEE
Confidence            35899999999999999999999999999999998753211111111        1457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            .+++.+|+|||||++|+|.++++..    ..+++..++.++.||++|
T Consensus        76 ------~~~~~~~ivmEy~~~g~L~~~l~~~----~~l~e~~~~~i~~qi~~a  118 (263)
T d2j4za1          76 ------HDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANA  118 (263)
T ss_dssp             ------ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEeecCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHH
Confidence                  7888999999999999999999532    249999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.91  E-value=3.8e-24  Score=149.83  Aligned_cols=112  Identities=16%  Similarity=0.337  Sum_probs=95.5

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+++.||+|++........  .         .+.+|+.+++.++ ||||++++++|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~--~---------~~~~Ei~il~~l~-HpnIv~~~~~~   95 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK--Y---------TVKNEISIMNQLH-HPKLINLHDAF   95 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHH--H---------HHHHHHHHHTTCC-STTBCCEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHH--H---------HHHHHHHHHHhCC-CCCCCcEEEEE
Confidence            4579999999999999999999999999999999975432111  1         1458999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            +.++.+|+|||||+||+|.+++.   ..+..+++..++.++.||+.|
T Consensus        96 ------~~~~~~~ivmE~~~gg~L~~~~~---~~~~~l~e~~~~~i~~qi~~a  139 (352)
T d1koba_          96 ------EDKYEMVLILEFLSGGELFDRIA---AEDYKMSEAEVINYMRQACEG  139 (352)
T ss_dssp             ------ECSSEEEEEEECCCCCBHHHHTT---CTTCCBCHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEEcCCCChHHHHHH---hcCCCCCHHHHHHHHHHHHHH
Confidence                  78899999999999999988773   333469999999999999987

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=3.5e-24  Score=149.91  Aligned_cols=113  Identities=19%  Similarity=0.382  Sum_probs=96.1

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|.++.+|+.||+|.+........   .   .     +.+|+.+++.++ ||||++++++
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~---~---~-----~~~E~~il~~l~-HpnIv~~~~~   91 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---E---T-----VRKEIQTMSVLR-HPTLVNLHDA   91 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHH---H---H-----HHHHHHHHHHTC-CTTBCCEEEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhH---H---H-----HHHHHHHHHhCC-CCCCCcEEEE
Confidence            34689999999999999999999999999999999975432111   1   1     558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++.+|+|||||+||+|.+++.   .....+++..++.++.||+.|
T Consensus        92 ~------~~~~~~~ivmE~~~gg~L~~~l~---~~~~~l~e~~~~~i~~qi~~a  136 (350)
T d1koaa2          92 F------EDDNEMVMIYEFMSGGELFEKVA---DEHNKMSEDEAVEYMRQVCKG  136 (350)
T ss_dssp             E------EETTEEEEEECCCCSCBHHHHHT---CTTSCBCHHHHHHHHHHHHHH
T ss_pred             E------EECCEEEEEEEcCCCCCHHHHHH---hhcCCCCHHHHHHHHHHHHHH
Confidence            9      67889999999999999999984   223369999999999999987

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2e-24  Score=147.57  Aligned_cols=113  Identities=23%  Similarity=0.407  Sum_probs=95.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||+|.++.+++.||+|++.+..........        .+.+|+.+++.++ ||||+++++++ 
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~--------~~~~E~~il~~l~-HpnIv~l~~~~-   77 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP--------YVTRERDVMSRLD-HPFFVKLYFTF-   77 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHHCC-STTBCCEEEEE-
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHH--------HHHHHHHHHHHcC-CCCeeEEEEEE-
Confidence            6899999999999999999999999999999999753211111111        1568999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ++++.+|+|||||+||+|.+++...    ..+++..++.++.|++.|
T Consensus        78 -----~~~~~~~ivmEy~~gg~L~~~~~~~----~~l~e~~~~~~~~qi~~a  120 (288)
T d1uu3a_          78 -----QDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSA  120 (288)
T ss_dssp             -----ECSSEEEEEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             -----EECCEEEEEEEccCCCCHHHhhhcc----CCCCHHHHHHHHHHHHHH
Confidence                 7889999999999999999988532    259999999999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-24  Score=147.23  Aligned_cols=112  Identities=40%  Similarity=0.630  Sum_probs=95.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ++.++|++++.||+|+||.||+|.++.+|+.||+|.+........+.           +.+|+.+++.++ ||||+++++
T Consensus        17 dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~-----------~~~E~~il~~l~-HpnIv~~~~   84 (293)
T d1yhwa1          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-----------IINEILVMRENK-NPNIVNYLD   84 (293)
T ss_dssp             CTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHH-----------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHH-----------HHHHHHHHHhCC-CCCEeeEeE
Confidence            45678999999999999999999999999999999987543222111           458999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      ..++.+|+|||||+||+|.+++.   ..  .+++..++.++.||+.|
T Consensus        85 ~~------~~~~~~~ivmEy~~gg~L~~~~~---~~--~l~~~~~~~i~~qi~~a  128 (293)
T d1yhwa1          85 SY------LVGDELWVVMEYLAGGSLTDVVT---ET--CMDEGQIAAVCRECLQA  128 (293)
T ss_dssp             EE------EETTEEEEEEECCTTCBHHHHHH---HS--CCCHHHHHHHHHHHHHH
T ss_pred             EE------EECCEEEEEEEecCCCcHHHHhh---cc--CCCHHHHHHHHHHHHHH
Confidence            99      67888999999999999998874   22  49999999999999987

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.9e-23  Score=139.48  Aligned_cols=115  Identities=24%  Similarity=0.293  Sum_probs=93.8

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      .|++.+.||+|+||.||+|.+..++..+|+|.+............         +.+|+.++++++ ||||+++++++..
T Consensus        10 y~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~---------~~~E~~il~~l~-HpnIv~~~~~~~~   79 (270)
T d1t4ha_          10 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR---------FKEEAEMLKGLQ-HPNIVRFYDSWES   79 (270)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH---------HHHHHHHHTTCC-CTTBCCEEEEEEE
T ss_pred             EEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHH---------HHHHHHHHHhCC-CCCeeeEEEEEee
Confidence            457888999999999999999999999999998754333222211         568999999999 9999999999854


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..  .....+|++||||++|+|.++++..    ..+++..++.++.||++|
T Consensus        80 ~~--~~~~~~~ivmE~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~g  124 (270)
T d1t4ha_          80 TV--KGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKG  124 (270)
T ss_dssp             ES--SSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             cc--ccCCEEEEEEeCCCCCcHHHHHhcc----ccccHHHHHHHHHHHHHH
Confidence            32  3456799999999999999999532    259999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=6e-24  Score=146.50  Aligned_cols=115  Identities=35%  Similarity=0.529  Sum_probs=95.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      +.+.|+.++.||+|+||.||+|.+..+++.||+|.+.............        +.+|+.+++.++ ||||++++++
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~--------~~~Ei~il~~l~-HpnIv~~~~~   83 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD--------IIKEVRFLQKLR-HPNTIQYRGC   83 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHH--------HHHHHHHHTTCC-CTTBCCEEEE
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHH--------HHHHHHHHHHCC-CCCEeeEEEE
Confidence            4456999999999999999999999999999999998654433322221        558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      .+++.+|+|||||++|+|..++.   . +..+++..++.++.||++|
T Consensus        84 ~------~~~~~~~iv~E~~~~g~l~~~~~---~-~~~l~e~~~~~i~~qi~~a  127 (309)
T d1u5ra_          84 Y------LREHTAWLVMEYCLGSASDLLEV---H-KKPLQEVEIAAVTHGALQG  127 (309)
T ss_dssp             E------EETTEEEEEEECCSEEHHHHHHH---H-TSCCCHHHHHHHHHHHHHH
T ss_pred             E------EECCEEEEEEEecCCCchHHHHH---h-CCCCCHHHHHHHHHHHHHH
Confidence            9      67888999999999998866553   2 2369999999999999987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-23  Score=146.80  Aligned_cols=115  Identities=24%  Similarity=0.361  Sum_probs=96.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|.++.+++.||+|++.+..........        .+.+|+.+++.++ ||||++++++
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~--------~~~~E~~il~~l~-hp~Iv~l~~~   73 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVA--------HTVTESRVLQNTR-HPFLTALKYA   73 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHSCC-CTTBCCEEEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHH--------HHHHHHHHHHhCC-CCCEEEEEee
Confidence            456899999999999999999999999999999999753211111111        1558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ++.+.+|+|||||+||+|.++++..    ..+++..++.++.|++.|
T Consensus        74 ~------~~~~~~~iv~ey~~gg~L~~~~~~~----~~~~e~~~~~~~~qil~a  117 (337)
T d1o6la_          74 F------QTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSA  117 (337)
T ss_dssp             E------ECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHH
T ss_pred             e------ccccccccceeccCCCchhhhhhcc----cCCcHHHHHHHHHHHhhh
Confidence            9      7889999999999999999998532    259999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=9.7e-23  Score=138.48  Aligned_cols=118  Identities=21%  Similarity=0.303  Sum_probs=96.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++............        +.+|+.+++.++ ||||+++++++
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~--------~~~E~~~l~~~~-hpniv~~~~~~   76 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR--------FRREAQNAAALN-HPAIVAVYDTG   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHH--------HHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHH--------HHHHHHHHHhcC-CCCCCccccee
Confidence            467999999999999999999999999999999998654332222211        568999999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ...+  .....+|+|||||+||+|.+++...    ..+++..++.++.||++|
T Consensus        77 ~~~~--~~~~~~~lvmE~~~g~~L~~~~~~~----~~l~~~~~~~i~~qi~~a  123 (277)
T d1o6ya_          77 EAET--PAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQA  123 (277)
T ss_dssp             EEEC--SSSEEEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             eecc--CCCceEEEEEECCCCCEehhhhccc----CCCCHHHHHHHHHHHHHH
Confidence            5432  2334689999999999999988532    259999999999999987

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7e-23  Score=138.89  Aligned_cols=117  Identities=21%  Similarity=0.345  Sum_probs=96.1

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      -+++..+.++|++.+.||+|+||.||+|.++ +++.||+|.++......+.            +.+|+.++++++ ||||
T Consensus         5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~------------~~~E~~~l~~l~-HpnI   70 (272)
T d1qpca_           5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDA------------FLAEANLMKQLQ-HQRL   70 (272)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHH------------HHHHHHHHHHCC-CTTB
T ss_pred             CCCeecCHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHH------------HHHHHHHHHhCC-CCCE
Confidence            3567788899999999999999999999974 5678999999754333221            457999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++       .++.+|+||||+++|+|.+++......  .+++..++.++.||++|
T Consensus        71 v~~~g~~-------~~~~~~iv~Ey~~~g~L~~~~~~~~~~--~l~~~~~~~i~~qi~~g  121 (272)
T d1qpca_          71 VRLYAVV-------TQEPIYIITEYMENGSLVDFLKTPSGI--KLTINKLLDMAAQIAEG  121 (272)
T ss_dssp             CCEEEEE-------CSSSCEEEEECCTTCBHHHHTTSHHHH--TCCHHHHHHHHHHHHHH
T ss_pred             eEEEeee-------ccCCeEEEEEeCCCCcHHHHHhhcCCC--CCCHHHHHHHHHHHHHH
Confidence            9999987       345689999999999999987543332  49999999999999976

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.7e-23  Score=142.64  Aligned_cols=113  Identities=22%  Similarity=0.380  Sum_probs=91.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHh-ccCCCCCcceeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLK-DLSVHPNIPSFYGLY   98 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~i~~l~~~~   98 (152)
                      ++|.+.+.||+|+||.||+|.++.+++.||+|++.+...........        +..|..++. .++ ||||+++++++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~--------~~~e~~~l~~~~~-hp~Iv~~~~~~   72 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC--------TMVEKRVLSLAWE-HPFLTHMFCTF   72 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHH--------HHHHHHHHHHHTT-CTTBCCEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHH--------HHHHHHHHHHhCC-CCcEEEEEEEE
Confidence            68999999999999999999999999999999997532111111111        335666555 566 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.+|+||||++||+|.++++..    ..+++..++.++.||+.|
T Consensus        73 ------~~~~~~yivmEy~~~g~L~~~i~~~----~~~~e~~~~~~~~qi~~a  115 (320)
T d1xjda_          73 ------QTKENLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILG  115 (320)
T ss_dssp             ------ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHH
T ss_pred             ------ccCCceeEEEeecCCCcHHHHhhcc----CCCCHHHHHHHHHHHHHH
Confidence                  7889999999999999999999532    248999999999999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=5.4e-23  Score=142.11  Aligned_cols=114  Identities=18%  Similarity=0.370  Sum_probs=94.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++.+..........        .+.+|+.+++.++ ||||+++++++
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~--------~~~~E~~il~~l~-HpnIv~~~~~~   73 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVE--------HTNDERLMLSIVT-HPFIIRMWGTF   73 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--------HHHHHHHHHHSCC-BTTBCCEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHH--------HHHHHHHHHHhcc-CcChhheeeeE
Confidence            35899999999999999999999999999999999753211111111        1558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.+|+|||||+||+|..++..    +..+++..++.++.||+.|
T Consensus        74 ------~~~~~~~ivmE~~~gg~l~~~~~~----~~~~~~~~~~~~~~qi~~a  116 (316)
T d1fota_          74 ------QDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLA  116 (316)
T ss_dssp             ------ECSSEEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHH
T ss_pred             ------eeCCeeeeEeeecCCccccccccc----cccccccHHHHHHHHHHHh
Confidence                  788999999999999999888842    2358999999999999876

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.7e-22  Score=136.36  Aligned_cols=111  Identities=23%  Similarity=0.355  Sum_probs=93.3

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|.++......+.            +.+|+.++++++ ||||++++++
T Consensus         3 dp~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~------------~~~E~~~l~~l~-HpnIv~~~g~   68 (263)
T d1sm2a_           3 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEED------------FIEEAEVMMKLS-HPKLVQLYGV   68 (263)
T ss_dssp             CCSCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHH------------HHHHHHHHHHCC-CTTBCCEEEE
T ss_pred             ChHHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHH------------HHHHHHHHHhcC-CCCcccccce
Confidence            3468999999999999999999874 5678999998754433221            457999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      ..++.+++||||+++|+|.+++..   .+..+++..++.++.||++|
T Consensus        69 ~------~~~~~~~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qia~g  113 (263)
T d1sm2a_          69 C------LEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEG  113 (263)
T ss_dssp             E------CSSSSCEEEEECCTTCBHHHHHHT---TTTCCCHHHHHHHHHHHHHH
T ss_pred             e------ccCCceEEEEEecCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHH
Confidence            9      677889999999999999999853   33468999999999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=9.7e-23  Score=143.25  Aligned_cols=117  Identities=21%  Similarity=0.330  Sum_probs=92.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.++.+|+.||+|++.+.............     ....++.+++.+. ||||+++++++
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~-----~e~~~~~~l~~~~-hpnIv~l~~~~   76 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-----NERIMLSLVSTGD-CPFIVCMSYAF   76 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHH-----HHHHHHHHHSSSC-CTTBCCEEEEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHH-----HHHHHHHHHhcCC-CCcEEEEEEEE
Confidence            46899999999999999999999999999999999743221111111110     0224566777777 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.+|+|||||+||+|.+++...    ..+++..++.++.||+.|
T Consensus        77 ------~~~~~~~ivmE~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~a  119 (364)
T d1omwa3          77 ------HTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILG  119 (364)
T ss_dssp             ------ECSSEEEEEECCCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHH
T ss_pred             ------EECCEEEEEEEecCCCcHHHHHHhc----ccccHHHHHHHHHHHHHH
Confidence                  7889999999999999999999532    258999999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.8e-22  Score=138.49  Aligned_cols=115  Identities=20%  Similarity=0.321  Sum_probs=91.9

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ...++|++.+.||+|+||.||+|.++.+++   .+|+|.+...... . ....        +.+|+.++++++ ||||++
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~-~~~~--------~~~E~~~l~~l~-HpnIv~   91 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-K-QRRD--------FLSEASIMGQFD-HPNVIH   91 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCH-H-HHHH--------HHHHHHHHTTCC-CTTBCC
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCH-H-HHHH--------HHHHHHHHHhCC-CCCCcc
Confidence            456789999999999999999999877654   4778877543221 1 1111        568999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++      ..++.++++||||++|+|.+++.   .....+++..++.++.||++|
T Consensus        92 l~g~~------~~~~~~~iv~Ey~~~g~L~~~~~---~~~~~l~~~~~~~i~~qia~g  140 (299)
T d1jpaa_          92 LEGVV------TKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAG  140 (299)
T ss_dssp             EEEEE------CSSSSCEEEEECCTTEEHHHHHH---TTTTCSCHHHHHHHHHHHHHH
T ss_pred             EEEEE------eeCCEEEEEEEecCCCcceeeec---cccCCCCHHHHHHHHHHHHHH
Confidence            99999      67888999999999999999885   333369999999999999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.3e-23  Score=139.70  Aligned_cols=115  Identities=24%  Similarity=0.332  Sum_probs=93.4

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      +|..+.++|++.+.||+|+||.||+|..   +..+|+|.++...........         +.+|+.++..++ ||||++
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~---------~~~E~~~l~~l~-HpnIv~   68 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQA---------FKNEVGVLRKTR-HVNILL   68 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHH---------HHHHHHHHTTCC-CTTBCC
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHH---------HHHHHHHHHhCC-CCCEee
Confidence            4667889999999999999999999974   335999998754333222221         568999999998 999999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.       ..+.++++||||++|+|.+++..   .+..+++..++.++.||++|
T Consensus        69 ~~~~~-------~~~~~~lv~Ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~g  116 (276)
T d1uwha_          69 FMGYS-------TAPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQG  116 (276)
T ss_dssp             EEEEE-------CSSSCEEEEECCCEEEHHHHHHT---SCCCCCHHHHHHHHHHHHHH
T ss_pred             eeEEE-------eccEEEEEEecCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHH
Confidence            99976       34568999999999999999952   33369999999999999986

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.7e-22  Score=135.51  Aligned_cols=119  Identities=25%  Similarity=0.383  Sum_probs=97.3

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      ...+++.++.++|++.+.||+|+||.||+|.++.+ +.||+|.+.......+.            +.+|+.+++.++ ||
T Consensus         7 ~~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~------------~~~E~~~l~~l~-h~   72 (285)
T d1fmka3           7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEA------------FLQEAQVMKKLR-HE   72 (285)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHH------------HHHHHHHHHHCC-CT
T ss_pred             CCCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHH------------HHHHHHHHHhcc-cC
Confidence            34466778889999999999999999999997544 57999999754433221            457999999998 99


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++      . ++..++||||+++|+|.+++.....  ..+++..++.++.||+.|
T Consensus        73 nIv~~~g~~------~-~~~~~lv~Ey~~~g~l~~~~~~~~~--~~l~~~~~~~i~~~i~~g  125 (285)
T d1fmka3          73 KLVQLYAVV------S-EEPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASG  125 (285)
T ss_dssp             TBCCEEEEE------C-SSSCEEEECCCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHH
T ss_pred             CEeEEEEEE------e-cCCeEEEEEecCCCchhhhhhhccc--ccchHHHHHHHHHHHHHH
Confidence            999999988      3 3458999999999999998864333  359999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.1e-22  Score=138.16  Aligned_cols=113  Identities=29%  Similarity=0.413  Sum_probs=90.0

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||+|.++.+++.||+|+++..........         .+.+|+.++++++ ||||+++++++ 
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~---------~~~~Ei~il~~l~-Hp~Iv~~~~~~-   70 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---------TAIREISLLKELN-HPNIVKLLDVI-   70 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCH---------HHHHHHHHHTTCC-CTTBCCEEEEE-
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHH---------HHHHHHHHHHhCC-CCcEEEecccc-
Confidence            689999999999999999999999999999999965332111111         1558999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           .+.+.+|++|||+.+ ++.+++..  .....+++..++.++.|+++|
T Consensus        71 -----~~~~~~~iv~e~~~~-~~~~~~~~--~~~~~l~e~~~~~~~~qil~~  114 (298)
T d1gz8a_          71 -----HTENKLYLVFEFLHQ-DLKKFMDA--SALTGIPLPLIKSYLFQLLQG  114 (298)
T ss_dssp             -----EETTEEEEEEECCSE-EHHHHHHH--TTTTCCCHHHHHHHHHHHHHH
T ss_pred             -----ccccceeEEEeecCC-chhhhhhh--hcccCCCHHHHHHHHHHHHHH
Confidence                 678899999999964 55555532  223359999999999999987

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.2e-22  Score=135.81  Aligned_cols=115  Identities=21%  Similarity=0.347  Sum_probs=90.2

Q ss_pred             CCCCCceEEEEE-eeccceeEEEEEEEcCC--CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          16 RDPRNKFKLQEL-IGEGTYGEVYWAKDVET--GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        16 ~~~~~~~~~~~~-lg~G~~g~V~~~~~~~~--~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...+++|.+.+. ||+|+||.||+|.++..  +..||+|.++..... .. ..        .+.+|+.++++++ ||||+
T Consensus         4 ~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~-~~-~~--------~~~~E~~il~~l~-HpnIv   72 (285)
T d1u59a_           4 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-AD-TE--------EMMREAQIMHQLD-NPYIV   72 (285)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCH-HH-HH--------HHHHHHHHHHHCC-CTTBC
T ss_pred             eecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCH-HH-HH--------HHHHHHHHHHhCC-CCCEe
Confidence            345678999885 99999999999987644  446999998754321 11 11        1568999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      +. +.+|+|||||++|+|.+++.   ..+..+++..++.++.||++|
T Consensus        73 ~l~g~~------~~-~~~~lvmE~~~~g~L~~~l~---~~~~~l~~~~~~~i~~qi~~g  121 (285)
T d1u59a_          73 RLIGVC------QA-EALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMG  121 (285)
T ss_dssp             CEEEEE------ES-SSEEEEEECCTTEEHHHHHT---TCTTTSCHHHHHHHHHHHHHH
T ss_pred             eEeeee------cc-CeEEEEEEeCCCCcHHHHhh---ccccCCCHHHHHHHHHHHHHH
Confidence            999988      43 45899999999999999874   333469999999999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4e-22  Score=138.23  Aligned_cols=121  Identities=19%  Similarity=0.399  Sum_probs=93.0

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCC-----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCC
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGD-----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHP   89 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~   89 (152)
                      +..++++|++.+.||+|+||.||+|.+...++     .+|+|.+........ ..         .+.+|+.++..+.+||
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~-~~---------~~~~E~~~l~~l~~Hp  101 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE-RE---------ALMSELKMMTQLGSHE  101 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CH---------HHHHHHHHHHHHCCCT
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHH-HH---------HHHHHHHHHHHhcCCC
Confidence            45678899999999999999999999865543     588888764322111 11         1557999999884499


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh-------------------CCCCCCHHHHHHHHHhhhc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK-------------------RGVSLSEDQIAYILYGTVQ  150 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------------~~~~l~~~~~~~~~~qi~~  150 (152)
                      ||+++++++      ..++.+|+|||||++|+|.++++..+.                   ....+++..++.++.||++
T Consensus       102 nIv~l~~~~------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~  175 (325)
T d1rjba_         102 NIVNLLGAC------TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK  175 (325)
T ss_dssp             TBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHH
T ss_pred             cEeEEEEEE------eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHH
Confidence            999999999      788899999999999999999964321                   1125899999999999998


Q ss_pred             c
Q psy2812         151 V  151 (152)
Q Consensus       151 a  151 (152)
                      |
T Consensus       176 g  176 (325)
T d1rjba_         176 G  176 (325)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.3e-22  Score=135.56  Aligned_cols=114  Identities=24%  Similarity=0.392  Sum_probs=92.4

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      |....++|++.+.||+|+||.||+|..  .++.+|+|.++..... +.            +.+|+.+++.++ ||||+++
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~-~~------------~~~E~~~l~~l~-HpnIv~~   65 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA-QA------------FLAEASVMTQLR-HSNLVQL   65 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC---HH------------HHHTHHHHTTCC-CTTBCCE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHHH-HH------------HHHHHHHHHhCC-CCCEeeE
Confidence            556778999999999999999999987  4678999999643211 11            457999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++.     +..+.+|+||||+++|+|.+++......  .+++..++.++.||++|
T Consensus        66 ~g~~~-----~~~~~~~lv~ey~~~g~L~~~l~~~~~~--~l~~~~~~~i~~~i~~a  115 (262)
T d1byga_          66 LGVIV-----EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEA  115 (262)
T ss_dssp             EEEEC-----CC--CCEEEECCCTTEEHHHHHHHHHHH--HCCHHHHHHHHHHHHHH
T ss_pred             EEEEE-----ecCCcEEEEEeccCCCCHHHHHHhcCCC--CCCHHHHHHHHHHHHhh
Confidence            99874     3456689999999999999999643322  48999999999999987

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8e-23  Score=142.25  Aligned_cols=113  Identities=20%  Similarity=0.306  Sum_probs=90.4

Q ss_pred             CCceEEEE-EeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          19 RNKFKLQE-LIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~~-~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      .++|.++. .||+|+||.||+|.++.+++.||+|.++...    .            ..+|+.++.++.+||||++++++
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~------------~~~E~~~~~~~~~hpnIv~l~~~   73 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----K------------ARREVELHWRASQCPHIVRIVDV   73 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSH----H------------HHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcH----H------------HHHHHHHHHHhcCCCCCCeEEEE
Confidence            46899875 6999999999999999999999999986421    1            34688776655449999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |.+..  ....++|+|||||+||+|.++++.  .....+++..++.++.||+.|
T Consensus        74 ~~~~~--~~~~~~~ivmEy~~gg~L~~~i~~--~~~~~l~e~~~~~i~~qi~~a  123 (335)
T d2ozaa1          74 YENLY--AGRKCLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEA  123 (335)
T ss_dssp             EEEEE--TTEEEEEEEEECCCSEEHHHHHHS--CSCCCEEHHHHHHHHHHHHHH
T ss_pred             Eeecc--cCCCEEEEEEECCCCCcHHHHHHh--cCCCCcCHHHHHHHHHHHHHH
Confidence            83211  235779999999999999999953  222369999999999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.4e-22  Score=134.47  Aligned_cols=110  Identities=20%  Similarity=0.363  Sum_probs=93.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.+ .++..||+|.++......+.            +.+|+.++..++ ||||+++++++
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~~~~------------~~~Ev~~~~~l~-HpnIv~~~g~~   68 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDE------------FIEEAKVMMNLS-HEKLVQLYGVC   68 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSSCHHH------------HHHHHHHHHTCC-CTTBCCEEEEE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcCCHHH------------HHHHHHHHHhcC-CCceeeEEEEE
Confidence            36899999999999999999997 46778999999865443322            457999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ..++.+++||||+++|+|.+++...   ...+++..++.++.|+++|
T Consensus        69 ------~~~~~~~iv~Ey~~~g~l~~~~~~~---~~~~~~~~~~~i~~qi~~g  112 (258)
T d1k2pa_          69 ------TKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEA  112 (258)
T ss_dssp             ------CCSSSEEEEEECCTTEEHHHHHHSG---GGCCCHHHHHHHHHHHHHH
T ss_pred             ------eeCCceEEEEEccCCCcHHHhhhcc---ccCCcHHHHHHHHHHHHHH
Confidence                  6788899999999999999987432   2358999999999999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=5.2e-22  Score=138.83  Aligned_cols=114  Identities=21%  Similarity=0.344  Sum_probs=95.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++.+........   ..     .+.+|+.+++.++ ||||+++++++
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~---~~-----~~~~E~~il~~l~-hpnIv~~~~~~  110 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ---IE-----HTLNEKRILQAVN-FPFLVKLEFSF  110 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTC---HH-----HHHHHHHHHTTCC-CTTBCCEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHH---HH-----HHHHHHHHHHHcC-CCcEeeccccc
Confidence            478999999999999999999999999999999987422111110   11     1568999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+.++++|||+.||+|.+++...    ..+++..++.++.||+.|
T Consensus       111 ------~~~~~~~~v~e~~~~g~l~~~l~~~----~~l~e~~~~~i~~qi~~a  153 (350)
T d1rdqe_         111 ------KDNSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLT  153 (350)
T ss_dssp             ------ECSSEEEEEEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             ------ccccccccccccccccchhhhHhhc----CCCCHHHHHHHHHHHHHH
Confidence                  7888999999999999999998532    259999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.1e-21  Score=132.97  Aligned_cols=116  Identities=28%  Similarity=0.492  Sum_probs=91.8

Q ss_pred             cCCCCCceEEEEEeeccceeEEEEEEEcCCC---CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCc
Q psy2812          15 LRDPRNKFKLQELIGEGTYGEVYWAKDVETG---DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNI   91 (152)
Q Consensus        15 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~---~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i   91 (152)
                      +..++++|++.+.||+|+||.||+|.+..++   ..+|+|.++....  .....        .+.+|+.+++.++ ||||
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~--~~~~~--------~~~~E~~~l~~l~-HpnI   70 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--DSVRE--------KFLQEALTMRQFD-HPHI   70 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS--HHHHH--------HHHHHHHHHHTCC-CTTB
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC--HHHHH--------HHHHHHHHHHhCC-CCCE
Confidence            4567889999999999999999999986543   3577787754322  11111        1568999999998 9999


Q ss_pred             ceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          92 PSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        92 ~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++++++      . ++.+|+||||+++|+|.+++..   ....+++..++.++.||++|
T Consensus        71 v~l~~~~------~-~~~~~iv~E~~~~g~l~~~~~~---~~~~l~~~~~~~~~~qi~~g  120 (273)
T d1mp8a_          71 VKLIGVI------T-ENPVWIIMELCTLGELRSFLQV---RKYSLDLASLILYAYQLSTA  120 (273)
T ss_dssp             CCEEEEE------C-SSSCEEEEECCTTEEHHHHHHH---TTTTSCHHHHHHHHHHHHHH
T ss_pred             eeEEEEE------e-cCeEEEEEEeccCCcHHhhhhc---cCCCCCHHHHHHHHHHHHHH
Confidence            9999998      3 4679999999999999998742   23369999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.2e-21  Score=132.91  Aligned_cols=122  Identities=21%  Similarity=0.346  Sum_probs=97.5

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEc-----CCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDV-----ETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVH   88 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   88 (152)
                      .+..+.++|++.+.||+|+||.||+|...     .+++.+|+|.++....... ..         .+.+|+.+++.+.+|
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~---------~~~~E~~~~~~l~~H   86 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE-RE---------ALMSELKVLSYLGNH   86 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH-HH---------HHHHHHHHHHHHCCC
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHH-HH---------HHHHHHHHHHhccCC
Confidence            46678899999999999999999999863     3456899999975432211 11         155799999998559


Q ss_pred             CCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          89 PNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        89 ~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      |||+++++++      .....++++||||++|+|.++++....              ....+++..++.++.||++|
T Consensus        87 pnIv~~~g~~------~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  157 (311)
T d1t46a_          87 MNIVNLLGAC------TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG  157 (311)
T ss_dssp             TTBCCEEEEE------CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEEE------eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHH
Confidence            9999999999      778889999999999999999965331              12258999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.3e-21  Score=133.54  Aligned_cols=118  Identities=26%  Similarity=0.422  Sum_probs=92.5

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCe--EEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDH--VAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~--~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ..++|++.+.||+|+||.||+|.++.++..  +|+|.+...... +. ...        +.+|+.++..+.+||||++++
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~-~~~--------~~~E~~~l~~l~~HpnIv~~~   77 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-DD-HRD--------FAGELEVLCKLGHHPNIINLL   77 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CH--------HHHHHHHHTTCCCCTTBCCEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccCh-HH-HHH--------HHHHHHHHHhccCCCCEeeEE
Confidence            457899999999999999999999888764  567776532221 11 111        558999999984499999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHh------------hhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM------------KKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~------------~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++      ...+.+++||||+++|+|.++++..            ......+++..++.++.||++|
T Consensus        78 ~~~------~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~g  139 (309)
T d1fvra_          78 GAC------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARG  139 (309)
T ss_dssp             EEE------EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHH
T ss_pred             EEE------ecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHH
Confidence            999      6678899999999999999999632            1223469999999999999876

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.1e-21  Score=133.44  Aligned_cols=116  Identities=22%  Similarity=0.327  Sum_probs=92.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .-+|+.++.||+|+||.||+|.+..+++.||+|.+......               ..+|+.+++.++ ||||+++++++
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---------------~~~Ei~il~~l~-h~niv~~~~~~   82 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---------------KNRELQIMRKLD-HCNIVRLRYFF   82 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---------------CCHHHHHHHHCC-CTTBCCEEEEE
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---------------HHHHHHHHHhcC-CCCCCcEEEEE
Confidence            34799999999999999999999999999999999754321               226899999998 99999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..........++|++||||+++ +.+.+......+..+++..++.++.||++|
T Consensus        83 ~~~~~~~~~~~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~a  134 (350)
T d1q5ka_          83 YSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRS  134 (350)
T ss_dssp             EEC--CCSCCEEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             EecCccCCceEEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHH
Confidence            7654334556799999999755 445554334444579999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.6e-21  Score=131.51  Aligned_cols=125  Identities=19%  Similarity=0.262  Sum_probs=99.3

Q ss_pred             ccccccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhc
Q psy2812          10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKD   84 (152)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~   84 (152)
                      .-.+.|..+.++|++.+.||+|+||.||+|.+..     +++.||+|.+...... .....         +.+|+.+++.
T Consensus        10 ~~~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~-~~~~~---------~~~E~~il~~   79 (308)
T d1p4oa_          10 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM-RERIE---------FLNEASVMKE   79 (308)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH-HHHHH---------HHHHHHHGGG
T ss_pred             cCccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccCh-HHHHH---------HHHHHHHHHH
Confidence            3335677888999999999999999999998752     3567999998753321 21111         5689999999


Q ss_pred             cCCCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------CCCCCCHHHHHHHHHhhhcc
Q psy2812          85 LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        85 ~~~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++ ||||+++++.+      ..++..++||||+++|+|.+++.....      ....+++..+..++.|+++|
T Consensus        80 l~-h~nIv~~~~~~------~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~g  145 (308)
T d1p4oa_          80 FN-CHHVVRLLGVV------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG  145 (308)
T ss_dssp             CC-CTTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred             cC-CCCEeeeeeEE------ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHH
Confidence            98 99999999999      678889999999999999999864331      11247899999999999876

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8.4e-21  Score=129.49  Aligned_cols=112  Identities=27%  Similarity=0.356  Sum_probs=94.6

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||+|.+..+++.||+|+++...........         +.+|+.+++.++ ||||+++++.+ 
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~---------~~~E~~il~~l~-h~niv~~~~~~-   70 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSS---------ALREICLLKELK-HKNIVRLHDVL-   70 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHH---------HHHHHHHHTTCC-CTTBCCEEEEE-
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHH---------HHHHHHHHHhcC-cCCEEeecccc-
Confidence            5899999999999999999999999999999999754432222221         568999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..+...+++++++.++++..+++.    ...+++..++.++.|+++|
T Consensus        71 -----~~~~~~~iv~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~q~~~a  113 (292)
T d1unla_          71 -----HSDKKLTLVFEFCDQDLKKYFDSC----NGDLDPEIVKSFLFQLLKG  113 (292)
T ss_dssp             -----ECSSEEEEEEECCSEEHHHHHHHT----TTCCCHHHHHHHHHHHHHH
T ss_pred             -----ccccceeEEeeecccccccccccc----ccccchhHHHHHHHHHHHH
Confidence                 788899999999998888777642    2358999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.7e-21  Score=132.97  Aligned_cols=118  Identities=24%  Similarity=0.376  Sum_probs=88.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|.++.+++.||+|++.+..........         +.+|+.+++.++ ||||++++++
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~---------~~~Ei~il~~l~-hpniv~l~~~   85 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR---------AYRELRLLKHMR-HENVIGLLDV   85 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHH---------HHHHHHHHHHCC-BTTBCCCSEE
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHH---------HHHHHHHHHhcC-CCCeeEEEEE
Confidence            568999999999999999999999999999999999754333222211         558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +...+......++|++|||+ +++|..+++   ..  .+++..++.++.||+.|
T Consensus        86 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~---~~--~l~~~~~~~~~~qi~~a  133 (346)
T d1cm8a_          86 FTPDETLDDFTDFYLVMPFM-GTDLGKLMK---HE--KLGEDRIQFLVYQMLKG  133 (346)
T ss_dssp             ECSCSSTTTCCCCEEEEECC-SEEHHHHHH---HC--CCCHHHHHHHHHHHHHH
T ss_pred             eccCccccccceEEEEEecc-cccHHHHHH---hc--cccHHHHHHHHHHHHHH
Confidence            95433223445689999999 667777663   22  49999999999999987

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.2e-21  Score=129.86  Aligned_cols=111  Identities=21%  Similarity=0.331  Sum_probs=84.0

Q ss_pred             CceEEE-EEeeccceeEEEEEEEcC--CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          20 NKFKLQ-ELIGEGTYGEVYWAKDVE--TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        20 ~~~~~~-~~lg~G~~g~V~~~~~~~--~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      +.+.+. +.||+|+||.||+|.++.  +++.||+|.++....... ....        +.+|+.++++++ ||||+++++
T Consensus         6 ~~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-~~~~--------~~~E~~il~~l~-HpnIv~~~g   75 (277)
T d1xbba_           6 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-LKDE--------LLAEANVMQQLD-NPYIVRMIG   75 (277)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-HHHH--------HHHHHHHHHTCC-CTTBCCEEE
T ss_pred             hhCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHH-HHHH--------HHHHHHHHHhCC-CCCCceEEE
Confidence            334443 369999999999998653  456799999864322211 1111        568999999998 999999999


Q ss_pred             eeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++      +. +..++|||||++|+|.++++.    ...+++..++.++.||++|
T Consensus        76 ~~------~~-~~~~lvmE~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~g  119 (277)
T d1xbba_          76 IC------EA-ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMG  119 (277)
T ss_dssp             EE------ES-SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHH
T ss_pred             Ee------cc-CCEEEEEEcCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHH
Confidence            88      43 357899999999999999853    2359999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=5.6e-21  Score=130.20  Aligned_cols=111  Identities=27%  Similarity=0.289  Sum_probs=89.9

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      ++|++++.||+|+||.||+|.++ +++.||+|++...........         .+.+|+.+++.++ ||||+++++.+ 
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~---------~~~~E~~il~~l~-hpnIv~~~~~~-   69 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPS---------TTIREISILKELK-HSNIVKLYDVI-   69 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCH---------HHHHHHHGGGGCC-CTTBCCEEEEE-
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHH---------HHHHHHHHHHhCC-CCcEEeeeeec-
Confidence            68999999999999999999984 778999999975432211111         1558999999998 99999999999 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                           ..++..+++||++.++.+..+.    .....+++..++.++.||+.|
T Consensus        70 -----~~~~~~~i~~e~~~~~~~~~~~----~~~~~l~~~~~~~i~~qi~~~  112 (286)
T d1ob3a_          70 -----HTKKRLVLVFEHLDQDLKKLLD----VCEGGLESVTAKSFLLQLLNG  112 (286)
T ss_dssp             -----ECSSCEEEEEECCSEEHHHHHH----TSTTCCCHHHHHHHHHHHHHH
T ss_pred             -----ccCCceeEEEEeehhhhHHHHH----hhcCCcchhhhHHHHHHHHHH
Confidence                 7888999999999766555544    223469999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.8e-21  Score=130.92  Aligned_cols=122  Identities=20%  Similarity=0.407  Sum_probs=90.7

Q ss_pred             ccCCCCCceEEEEEeeccceeEEEEEEEcCCC-------CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETG-------DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        14 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      .+..+.++|.+.+.||+|+||.||+|++...+       ..||+|.+...... .. ..+        +..|...+.++.
T Consensus         7 ~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~-~~-~~~--------~~~e~~~l~~~~   76 (299)
T d1fgka_           7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KD-LSD--------LISEMEMMKMIG   76 (299)
T ss_dssp             TTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCH-HH-HHH--------HHHHHHHHHHHC
T ss_pred             cCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccCh-HH-HHH--------HHHHHHHHHHhc
Confidence            35678899999999999999999999875543       36899988754321 11 111        456888888875


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +||||+++++++      ..++.+++|||||++|+|.++++....            ....+++..++.++.||+.|
T Consensus        77 ~HpnIv~~~~~~------~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~a  147 (299)
T d1fgka_          77 KHKNIINLLGAC------TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG  147 (299)
T ss_dssp             CCTTBCCEEEEE------CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEeccccc------ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHH
Confidence            599999999999      678889999999999999999964321            12358999999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.3e-21  Score=133.26  Aligned_cols=116  Identities=24%  Similarity=0.375  Sum_probs=90.9

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++++.||+|+||.||+|.++.+|+.||+|++............         +.+|+.+++.++ ||||++++++|
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~---------~~~Ei~il~~l~-hpnIv~~~~~f   85 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR---------AYRELVLMKCVN-HKNIISLLNVF   85 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEEE
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHH---------HHHHHHHHHhcC-CCCeeEEEEEE
Confidence            46799999999999999999999999999999999865443322221         558999999998 99999999999


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ......+...++|++||||.+ ++.+.+.      ..+++..++.++.||+.|
T Consensus        86 ~~~~~~~~~~~~~iv~Ey~~~-~l~~~~~------~~~~~~~i~~~~~qil~g  131 (355)
T d2b1pa1          86 TPQKTLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCG  131 (355)
T ss_dssp             CSCCSTTTCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHH
T ss_pred             ecccccccCceeEEEEeccch-HHHHhhh------cCCCHHHHHHHHHHHHHH
Confidence            543332356889999999965 4455441      258999999999999876

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.5e-21  Score=133.91  Aligned_cols=111  Identities=23%  Similarity=0.290  Sum_probs=84.8

Q ss_pred             EEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeeecCC
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGG  103 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~~~~  103 (152)
                      .++.||+|+||.||+|.++.+++.||+|+++......... ...     ..+.+|+.+++.++ ||||+++++++     
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~-----~~~~~Ei~il~~l~-hpnIv~~~~~~-----   69 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKD-GIN-----RTALREIKLLQELS-HPNIIGLLDAF-----   69 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC-------------C-----THHHHHHHHHHHCC-CTTBCCEEEEE-----
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhH-HHH-----HHHHHHHHHHHhCC-CCCEeEEEeee-----
Confidence            4688999999999999999999999999987543221110 000     11568999999998 99999999999     


Q ss_pred             CCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         104 QPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                       ..++++|+||||+.++++..+.    ..+..+++..++.++.||++|
T Consensus        70 -~~~~~~~ivmE~~~~~~~~~~~----~~~~~l~~~~~~~~~~qil~a  112 (299)
T d1ua2a_          70 -GHKSNISLVFDFMETDLEVIIK----DNSLVLTPSHIKAYMLMTLQG  112 (299)
T ss_dssp             -CCTTCCEEEEECCSEEHHHHHT----TCCSSCCSSHHHHHHHHHHHH
T ss_pred             -ccCCceeehhhhhcchHHhhhh----hcccCCCHHHHHHHHHHHHHH
Confidence             7888999999999877655444    333469999999999999987

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.1e-20  Score=127.18  Aligned_cols=115  Identities=21%  Similarity=0.264  Sum_probs=92.0

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCC----CeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcc
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETG----DHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIP   92 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~----~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~   92 (152)
                      ...++|+..+.||+|+||.||+|.++.++    ..||+|.+...... +. ..        .+.+|+.++++++ ||||+
T Consensus         4 i~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~-~~-~~--------~~~~E~~il~~l~-H~nIv   72 (283)
T d1mqba_           4 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQ-RV--------DFLGEAGIMGQFS-HHNII   72 (283)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH-HH-HH--------HHHHHHHHHHTCC-CTTBC
T ss_pred             CCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccCh-HH-HH--------HHHHHHHHHHhcC-CCCEe
Confidence            34568999999999999999999887654    36899998653322 11 11        1568999999998 99999


Q ss_pred             eeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          93 SFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        93 ~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++++      ...+.++++|||+.+|++.+++.   .....+++..++.++.||+.|
T Consensus        73 ~~~g~~------~~~~~~~~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~i~~~i~~g  122 (283)
T d1mqba_          73 RLEGVI------SKYKPMMIITEYMENGALDKFLR---EKDGEFSVLQLVGMLRGIAAG  122 (283)
T ss_dssp             CEEEEE------CSSSSEEEEEECCTTEEHHHHHH---HTTTCSCHHHHHHHHHHHHHH
T ss_pred             eeeEEE------ecCCceEEEEEecccCcchhhhh---cccccccHHHHHHHHHHHHHh
Confidence            999999      67788999999999999988874   333469999999999999876

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.2e-20  Score=129.53  Aligned_cols=122  Identities=21%  Similarity=0.362  Sum_probs=97.4

Q ss_pred             cccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC
Q psy2812          13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV   87 (152)
Q Consensus        13 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~   87 (152)
                      ..+..++++|++++.||+|+||.||+|+.+.     +++.||+|.+..... .+ ....        +.+|+.+++.++ 
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~-~~~~--------~~~E~~il~~l~-   74 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-AD-MQAD--------FQREAALMAEFD-   74 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HH-HHHH--------HHHHHHHHHTCC-
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC-hH-HHHH--------HHHHHHHHHhcC-
Confidence            3467789999999999999999999998753     456899999874322 11 1111        568999999998 


Q ss_pred             CCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh--------------------CCCCCCHHHHHHHHHh
Q psy2812          88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK--------------------RGVSLSEDQIAYILYG  147 (152)
Q Consensus        88 ~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~~~~q  147 (152)
                      ||||+++++++      ...+..+++|||+++|+|.++++....                    ....+++..++.++.|
T Consensus        75 h~niv~~~~~~------~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  148 (301)
T d1lufa_          75 NPNIVKLLGVC------AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ  148 (301)
T ss_dssp             CTTBCCEEEEE------CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHH
T ss_pred             CCCcccceeee------ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHH
Confidence            99999999999      678889999999999999999963211                    1224899999999999


Q ss_pred             hhcc
Q psy2812         148 TVQV  151 (152)
Q Consensus       148 i~~a  151 (152)
                      ++.|
T Consensus       149 i~~g  152 (301)
T d1lufa_         149 VAAG  152 (301)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.1e-21  Score=130.73  Aligned_cols=118  Identities=19%  Similarity=0.265  Sum_probs=92.4

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC-CCCCcceeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS-VHPNIPSFYGL   97 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~l~~~   97 (152)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.+.+............     ..+.+|+.+++.++ +||||++++++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~-----~~~~~E~~il~~l~~~h~nIv~~~~~   77 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG-----TRVPMEVVLLKKVSSGFSGVIRLLDW   77 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTC-----CEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHH-----HHHHHHHHHHHHhccCCCCccEEEEE
Confidence            4689999999999999999999999999999999975432211000000     01347889998875 38999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCC-CChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTG-GSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +      +.++..|++|||+.+ +++.++++.   . ..+++..++.++.||++|
T Consensus        78 ~------~~~~~~~lv~e~~~~~~~l~~~~~~---~-~~l~e~~~~~~~~qi~~a  122 (273)
T d1xwsa_          78 F------ERPDSFVLILERPEPVQDLFDFITE---R-GALQEELARSFFWQVLEA  122 (273)
T ss_dssp             E------ECSSEEEEEEECCSSEEEHHHHHHH---H-CSCCHHHHHHHHHHHHHH
T ss_pred             E------eeCCeEEEEEEeccCcchHHHHHhc---c-CCCCHHHHHHHHHHHHHH
Confidence            9      788999999999976 577777743   2 259999999999999987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=9.7e-21  Score=131.28  Aligned_cols=110  Identities=22%  Similarity=0.418  Sum_probs=91.4

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|+++.+++.||+|+++...  ...            +.+|+.+++.+..||||++++++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~------------~~~Ei~il~~l~~hpnIv~~~~~   98 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKK------------IKREIKILENLRGGPNIITLADI   98 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHH------------HHHHHHHHHHHTTSTTBCCEEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHH------------HHHHHHHHHhccCCCCCcEEEEE
Confidence            3468999999999999999999999999999999986422  111            44799999998669999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhccC
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQVD  152 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a~  152 (152)
                      +..    .....++++||||++++|..+.       ..+++..++.++.||+.|+
T Consensus        99 ~~~----~~~~~~~~v~e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL  142 (328)
T d3bqca1          99 VKD----PVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKAL  142 (328)
T ss_dssp             EEC----TTTCSEEEEEECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHH
T ss_pred             EEe----cCCCceeEEEeecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHH
Confidence            842    3456799999999999987654       2499999999999999873

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.2e-20  Score=128.02  Aligned_cols=125  Identities=19%  Similarity=0.333  Sum_probs=92.5

Q ss_pred             ccccCCCCCceEEEEEeeccceeEEEEEEEcC-----CCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC
Q psy2812          12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVE-----TGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS   86 (152)
Q Consensus        12 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   86 (152)
                      ...+..+.++|++.+.||+|+||.||+|.+..     +++.||+|.+....... ....         +..|...+.++.
T Consensus         5 ~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~---------~~~e~~~l~~~~   74 (299)
T d1ywna1           5 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS-EHRA---------LMSELKILIHIG   74 (299)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHH-HHHH---------HHHHHHHHHHHC
T ss_pred             CccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcH-HHHH---------HHHHHHHHHhhc
Confidence            34566788899999999999999999999754     34579999987433211 1111         446777777776


Q ss_pred             CCCCcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhh------------CCCCCCHHHHHHHHHhhhcc
Q psy2812          87 VHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK------------RGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        87 ~~~~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~~~~qi~~a  151 (152)
                      .|+||+.+++.+.     +....++++||||++|+|.++++....            .+..+++..++.++.||++|
T Consensus        75 ~h~~iv~~~~~~~-----~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~g  146 (299)
T d1ywna1          75 HHLNVVNLLGACT-----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKG  146 (299)
T ss_dssp             CCTTBCCEEEEEC-----STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEeeeeec-----cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHH
Confidence            5999999998873     455679999999999999999965332            12358999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5e-20  Score=127.16  Aligned_cols=112  Identities=20%  Similarity=0.344  Sum_probs=85.7

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCC----eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGD----HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      .++|++++.||+|+||.||+|.+..+++    .+|+|.+......  .....        +.+|+.+++.++ ||||+++
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~--------~~~E~~~l~~l~-HpnIv~l   76 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKE--------ILDEAYVMASVD-NPHVCRL   76 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHH--------HHHHHHHHHHCC-CTTBCCE
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCH--HHHHH--------HHHHHHHHHhCC-CCCEeeE
Confidence            3579999999999999999999887776    4777877542211  11111        558999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      .. +..++++|++.+|+|.+++..   ....+++..++.++.||++|
T Consensus        77 ~g~~------~~-~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~g  123 (317)
T d1xkka_          77 LGIC------LT-STVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKG  123 (317)
T ss_dssp             EEEE------ES-SSEEEEEECCTTCBHHHHHHH---TSSSCCHHHHHHHHHHHHHH
T ss_pred             EEEE------ec-CCeeEEEEeccCCcccccccc---cccCCCHHHHHHHHHHHHHH
Confidence            9998      33 457888999999999998853   33469999999999999987

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.5e-20  Score=127.36  Aligned_cols=115  Identities=20%  Similarity=0.266  Sum_probs=82.9

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCC-CC--eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVET-GD--HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~--~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      ..++|++.+.||+|+||.||+|..... ++  .||+|.+.+...........        +.+|+.+++.++ ||||+++
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~--------~~~Ei~~l~~l~-H~nIv~~   76 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD--------FIREVNAMHSLD-HRNLIRL   76 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHH--------HHHHHHHHHHCC-CTTBCCE
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHH--------HHHHHHHHHhCC-CCCEEEE
Confidence            356899999999999999999986533 33  58999887543332222221        568999999998 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++      .. +..+++|||+++|++.+++....   ..+++..++.++.||++|
T Consensus        77 ~g~~------~~-~~~~lv~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~g  123 (273)
T d1u46a_          77 YGVV------LT-PPMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEG  123 (273)
T ss_dssp             EEEE------CS-SSCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHH
T ss_pred             EEEE------ee-cchheeeeeecCcchhhhhhccc---CCCCHHHHHHHHHHHHHH
Confidence            9999      43 46789999999999999885422   259999999999999987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.8e-20  Score=129.15  Aligned_cols=118  Identities=20%  Similarity=0.377  Sum_probs=92.0

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeee
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGL   97 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~   97 (152)
                      ..++|++++.||+|+||.||+|.+..+++.||+|++++..........         +.+|+.+++.++ |||+++++++
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~---------~~~Ei~il~~l~-h~~iv~~~~~   85 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR---------TYRELRLLKHMK-HENVIGLLDV   85 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHH---------HHHHHHHHHHCC-CTTBCCCSEE
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHH---------HHHHHHHHHhcC-CCCeeeEEEE
Confidence            356899999999999999999999999999999999865433322222         558999999998 9999999999


Q ss_pred             eeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +......+.... +++++++.||+|.++++   .  ..+++..++.++.||+.|
T Consensus        86 ~~~~~~~~~~~~-~~i~~~~~gg~L~~~~~---~--~~l~e~~~~~i~~qil~a  133 (348)
T d2gfsa1          86 FTPARSLEEFND-VYLVTHLMGADLNNIVK---C--QKLTDDHVQFLIYQILRG  133 (348)
T ss_dssp             ECSCSSTTTCCC-CEEEEECCSEEHHHHHT---T--CCCCHHHHHHHHHHHHHH
T ss_pred             EeeccccccCce-EEEEEeecCCchhhhcc---c--ccccHHHHHHHHHHHHHH
Confidence            854322122333 44556677999999883   2  249999999999999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8.9e-20  Score=127.23  Aligned_cols=118  Identities=25%  Similarity=0.325  Sum_probs=88.1

Q ss_pred             CCCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceee
Q psy2812          16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFY   95 (152)
Q Consensus        16 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~   95 (152)
                      ....++|.+++.||+|+||.||+|.+..+++.||+|++++.... .....         +.+|+.+++.++ |||+++++
T Consensus         4 ~~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~---------~~~Ei~il~~l~-hp~iv~~~   72 (345)
T d1pmea_           4 FDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQR---------TLREIKILLRFR-HENIIGIN   72 (345)
T ss_dssp             CCCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCH-HHHHH---------HHHHHHHHHHCC-CTTBCCCC
T ss_pred             cCcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcCh-HHHHH---------HHHHHHHHHHcC-CCCCCcEE
Confidence            34567899999999999999999999999999999999753321 11111         558999999998 99999999


Q ss_pred             eeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          96 GLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        96 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++..... .....+|++++ +.+|+|.++++.   .  .+++..++.++.|++.|
T Consensus        73 ~~~~~~~~-~~~~~~~l~~~-~~~g~L~~~l~~---~--~l~~~~i~~i~~qil~a  121 (345)
T d1pmea_          73 DIIRAPTI-EQMKDVYLVTH-LMGADLYKLLKT---Q--HLSNDHICYFLYQILRG  121 (345)
T ss_dssp             EEECCSST-TTCCCEEEEEE-CCCEEHHHHHHH---C--CCCHHHHHHHHHHHHHH
T ss_pred             EEEeeccc-cccceEEEEEe-ecCCchhhhhhc---C--CCCHHHHHHHHHHHHHH
Confidence            99843211 12234566655 559999999952   2  49999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-20  Score=130.33  Aligned_cols=116  Identities=19%  Similarity=0.392  Sum_probs=92.6

Q ss_pred             CCCceEEEEEeeccceeEEEEEEEc---CCCCeEEEEEeecCCCchh-hHHHHHHHhhhhhHHHHHHHHhccCCCCCcce
Q psy2812          18 PRNKFKLQELIGEGTYGEVYWAKDV---ETGDHVAIKIMENIPENIE-EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPS   93 (152)
Q Consensus        18 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~~a~K~i~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   93 (152)
                      ..++|++++.||+|+||.||+|.+.   .+|+.||+|.+++.....+ .....        +.+|+.++++++.||||++
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~--------~~~E~~il~~l~h~pnIv~   93 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH--------TRTERQVLEHIRQSPFLVT   93 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGG--------CCCHHHHHHHHHTCTTBCC
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHH--------HHHHHHHHHhccCCCeEEE
Confidence            4478999999999999999999874   4688999999864322111 11111        4479999999973589999


Q ss_pred             eeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          94 FYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        94 l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      +++.+      +....++++|||+.+|+|.++++...    .+++..++.++.|++.|
T Consensus        94 ~~~~~------~~~~~~~~v~e~~~~~~L~~~i~~~~----~~~e~~~~~~~~Qi~~a  141 (322)
T d1vzoa_          94 LHYAF------QTETKLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLA  141 (322)
T ss_dssp             EEEEE------EETTEEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHH
T ss_pred             eeeee------ccCCceeeeeecccccHHHHHHHhcc----cccHHHHHHHHHHHHHH
Confidence            99999      78889999999999999999985422    48899999999999887

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1e-19  Score=125.59  Aligned_cols=121  Identities=21%  Similarity=0.295  Sum_probs=87.8

Q ss_pred             CCCCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeee
Q psy2812          17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYG   96 (152)
Q Consensus        17 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~   96 (152)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++............         +.+|+.+++.++ |||++++++
T Consensus         7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~---------~~~E~~il~~l~-h~nii~~~~   76 (318)
T d3blha1           7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---------ALREIKILQLLK-HENVVNLIE   76 (318)
T ss_dssp             CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHH---------HHHHHHHHHHCC-CTTBCCEEE
T ss_pred             CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHH---------HHHHHHHHHHhc-CCCccceEe
Confidence            4457999999999999999999999999999999998654322211111         457999999998 999999999


Q ss_pred             eeeecC--CCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          97 LYLRRG--GQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        97 ~~~~~~--~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++....  .....+.+|++|||++++++. ..   ......+++..++.++.|+++|
T Consensus        77 ~~~~~~~~~~~~~~~~~iv~e~~~~~~~~-~~---~~~~~~~~~~~~~~i~~qil~~  129 (318)
T d3blha1          77 ICRTKASPYNRCKGSIYLVFDFCEHDLAG-LL---SNVLVKFTLSEIKRVMQMLLNG  129 (318)
T ss_dssp             EEEC----------CEEEEEECCCEEHHH-HH---TCTTCCCCHHHHHHHHHHHHHH
T ss_pred             eeecccccccccCceEEEEEeccCCCccc-hh---hhcccccccHHHHHHHHHHHHH
Confidence            885421  112346799999999766543 33   2333469999999999999987

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.7e-19  Score=122.46  Aligned_cols=109  Identities=24%  Similarity=0.448  Sum_probs=84.5

Q ss_pred             EEEEeeccceeEEEEEEEcCCCC---eEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeeee
Q psy2812          24 LQELIGEGTYGEVYWAKDVETGD---HVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLR  100 (152)
Q Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~---~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~~  100 (152)
                      +.+.||+|+||.||+|.+..++.   .+|+|.++.... ......         +.+|+.++++++ ||||+++++++. 
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~---------~~~E~~~l~~l~-HpnIv~~~g~~~-   98 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQ---------FLTEGIIMKDFS-HPNVLSLLGICL-   98 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCC-HHHHHH---------HHHHHHHHHTCC-CTTBCCCCEEEE-
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccC-HHHHHH---------HHHHHHHHHhCC-CCCEeEEeEEEE-
Confidence            36789999999999999866432   588998864322 111111         568999999998 999999999874 


Q ss_pred             cCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         101 RGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                          ..++..++|||||++|+|.+++..   ....+++..++.++.|+++|
T Consensus        99 ----~~~~~~~lv~E~~~~g~l~~~~~~---~~~~~~~~~~~~i~~qia~g  142 (311)
T d1r0pa_          99 ----RSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKG  142 (311)
T ss_dssp             ----ETTTEEEEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHH
T ss_pred             ----ecCCceEEEEEEeecCchhhhhcc---ccccchHHHHHHHHHHHHHh
Confidence                356789999999999999998852   33358889999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.8e-19  Score=123.59  Aligned_cols=119  Identities=23%  Similarity=0.330  Sum_probs=86.6

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCC-CCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhcc---CCCCCccee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVET-GDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDL---SVHPNIPSF   94 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~~~~~i~~l   94 (152)
                      .++|++++.||+|+||.||+|.+..+ ++.||+|.++...........         +.+|+.+++.+   + ||||+++
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~---------~~~E~~~l~~l~~~~-HpnIv~~   75 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS---------TIREVAVLRHLETFE-HPNVVRL   75 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCT---------HHHHHHHHHHHHHTC-CTTBCCE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHH---------HHHHHHHHHHHhhcC-CCCccee
Confidence            46899999999999999999998765 567899998753222111111         33566666554   5 9999999


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++++..... .....++++|||++++++.....   .....+++..++.++.|+++|
T Consensus        76 ~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~qi~~a  128 (305)
T d1blxa_          76 FDVCTVSRT-DRETKLTLVFEHVDQDLTTYLDK---VPEPGVPTETIKDMMFQLLRG  128 (305)
T ss_dssp             EEEEEEEEC-SSEEEEEEEEECCSCBHHHHHHH---SCTTCSCHHHHHHHHHHHHHH
T ss_pred             eeeeccccc-ccCceEEEEEEeccCCchhhhhh---ccCCCCCHHHHHHHHHHHHHH
Confidence            999854332 34578999999998766544332   233469999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.79  E-value=1.5e-18  Score=118.47  Aligned_cols=110  Identities=25%  Similarity=0.354  Sum_probs=91.1

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|+++..... ..            +.+|+..+..+..|+|++.+++++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-~~------------~~~e~~~~~~l~~~~~i~~~~~~~   70 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-PQ------------LRDEYRTYKLLAGCTGIPNVYYFG   70 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-CC------------HHHHHHHHHHTTTCTTCCCEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc-HH------------HHHHHHHHHHhcCCCCCCEEEEEe
Confidence            56899999999999999999999999999999988643221 11            346778888887569999999998


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ......++||||+ +++|.++++.   .+..+++..+..++.|++.|
T Consensus        71 ------~~~~~~~~vme~~-~~~l~~~~~~---~~~~~~~~~~~~i~~q~~~~  113 (293)
T d1csna_          71 ------QEGLHNVLVIDLL-GPSLEDLLDL---CGRKFSVKTVAMAAKQMLAR  113 (293)
T ss_dssp             ------EETTEEEEEEECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHH
T ss_pred             ------ecCCccEEEEEec-CCCHHHHHHh---hccchhhHHHHHHHHHHHHH
Confidence                  6788899999999 7899998853   23359999999999999875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.1e-18  Score=118.32  Aligned_cols=110  Identities=27%  Similarity=0.350  Sum_probs=85.5

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      .+|.+.+.||+|+||.||+|+.  +|+.||+|.++...  .....          ...|+..+..++ ||||+++++++.
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~----------~e~ei~~~~~~~-HpnIv~~~~~~~   67 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWF----------REAEIYQTVMLR-HENILGFIAADN   67 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHH----------HHHHHHTSTTCC-CTTBCCEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhHHH----------HHHHHHHHhhCC-CCcCcceEEEEE
Confidence            5789999999999999999985  67899999986321  11111          224566666777 999999999986


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ..+  .....+|+||||+++|+|.++++.   .  .+++..++.++.|++.+
T Consensus        68 ~~~--~~~~~~~lv~Ey~~~g~L~~~l~~---~--~l~~~~~~~~~~~ia~g  112 (303)
T d1vjya_          68 KDN--GTWTQLWLVSDYHEHGSLFDYLNR---Y--TVTVEGMIKLALSTASG  112 (303)
T ss_dssp             EEC--SSSEEEEEEEECCTTCBHHHHHHH---C--CBCHHHHHHHHHHHHHH
T ss_pred             eCC--CcceEEEEEEecccCCCHHHHHhc---C--CCCHHHHHHHHHHHHHH
Confidence            433  233579999999999999999953   2  48999999999999864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=4.6e-18  Score=116.27  Aligned_cols=110  Identities=25%  Similarity=0.358  Sum_probs=86.3

Q ss_pred             CCceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeee
Q psy2812          19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLY   98 (152)
Q Consensus        19 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~   98 (152)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...... ..            +..|+.+++.+..|++|+.+..++
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-~~------------~~~E~~i~~~l~~~~~i~~~~~~~   72 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-PQ------------LHIESKIYKMMQGGVGIPTIRWCG   72 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-CC------------HHHHHHHHHHSTTSTTCCCEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-HH------------HHHHHHHHHHccCCCcccEEEEEE
Confidence            35799999999999999999999999999999988753221 11            346889999998445566666666


Q ss_pred             eecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          99 LRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        99 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                            ...+..+++|||+ +|++.+.+..   .+..+++..++.++.|++.|
T Consensus        73 ------~~~~~~~ivme~~-~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~  115 (299)
T d1ckia_          73 ------AEGDYNVMVMELL-GPSLEDLFNF---CSRKFSLKTVLLLADQMISR  115 (299)
T ss_dssp             ------EETTEEEEEEECC-CCBHHHHHHH---TTTCCCHHHHHHHHHHHHHH
T ss_pred             ------ecCCEEEEEEEEc-CCchhhhhhh---ccCCCcHHHHHHHHHHHHHH
Confidence                  5678899999999 6677776642   23369999999999999876

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=2e-15  Score=105.36  Aligned_cols=115  Identities=19%  Similarity=0.185  Sum_probs=81.4

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccC----------CCC
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLS----------VHP   89 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~----------~~~   89 (152)
                      .+|++++.||+|+||.||+|.++.+|+.||+|++++.....+...            +|+.+++.+.          .|+
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~------------~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE------------DEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHH------------HHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHH------------HHHHHHHHhcchhhhhhhhcCcC
Confidence            469999999999999999999999999999999975432222222            4444444432          178


Q ss_pred             CcceeeeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          90 NIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        90 ~i~~l~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ||+++++++..    ......+++++++..+........ ......+++..++.++.||++|
T Consensus        81 ~iv~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~i~~qil~a  137 (362)
T d1q8ya_          81 HILKLLDHFNH----KGPNGVHVVMVFEVLGENLLALIK-KYEHRGIPLIYVKQISKQLLLG  137 (362)
T ss_dssp             TBCCCCEEEEE----EETTEEEEEEEECCCCEEHHHHHH-HTTTSCCCHHHHHHHHHHHHHH
T ss_pred             ceEEEEEEeee----ccccceeeeeeecccccccccccc-cccccCCcHHHHHHHHHHHHHH
Confidence            99999988743    344566777777655544333332 2333469999999999999876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.25  E-value=3.4e-11  Score=76.69  Aligned_cols=107  Identities=18%  Similarity=0.176  Sum_probs=69.0

Q ss_pred             eEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchh-------hHHHHHHHhhhhhHHHHHHHHhccCCCCCccee
Q psy2812          22 FKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIE-------EIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSF   94 (152)
Q Consensus        22 ~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~-------~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l   94 (152)
                      +.+.+.||+|+||.||+|.+ .+|+.+|+|+++.......       ................|...+..+. |++++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence            36789999999999999987 4688999998764322110       0000111112223457888888888 9999887


Q ss_pred             eeeeeecCCCCCCceEEEEEcccCCCChHHHHHHhhhCCCCCCHHHHHHHHHhhhcc
Q psy2812          95 YGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYGTVQV  151 (152)
Q Consensus        95 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~~~~qi~~a  151 (152)
                      ++..      .    .+++|||++++.+.+           +++..+..++.|+++|
T Consensus        80 ~~~~------~----~~lvme~~~~~~~~~-----------l~~~~~~~i~~ql~~~  115 (191)
T d1zara2          80 YAWE------G----NAVLMELIDAKELYR-----------VRVENPDEVLDMILEE  115 (191)
T ss_dssp             EEEE------T----TEEEEECCCCEEGGG-----------CCCSCHHHHHHHHHHH
T ss_pred             EEec------C----CEEEEEeeccccccc-----------hhhHHHHHHHHHHHHH
Confidence            7654      2    269999998754322           4555566777777664

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.69  E-value=0.0032  Score=40.51  Aligned_cols=88  Identities=11%  Similarity=0.090  Sum_probs=55.3

Q ss_pred             CceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCCCCCcceeeeeee
Q psy2812          20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYL   99 (152)
Q Consensus        20 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~l~~~~~   99 (152)
                      +.|.+++..+-++.+.||+..  ..++.+.+|...........           .+..|..++..+..+--+++++... 
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~-----------~~~~E~~~l~~l~~~vpvP~vl~~~-   79 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTY-----------DVEREKDMMLWLEGKLPVPKVLHFE-   79 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTT-----------CHHHHHHHHHHHTTTSCCCCEEEEE-
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchh-----------hHHHHHHHHHHHhccCCCCcEEEEE-
Confidence            356666654444456799875  45666778876532211110           1335777776665454567777766 


Q ss_pred             ecCCCCCCceEEEEEcccCCCChHHHH
Q psy2812         100 RRGGQPEEDQLWFVMELCTGGSVTDLV  126 (152)
Q Consensus       100 ~~~~~~~~~~~~lv~e~~~~g~L~~~l  126 (152)
                           +.++..+++|++++|.++.+..
T Consensus        80 -----~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          80 -----RHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             -----EETTEEEEEEECCSSEEHHHHT
T ss_pred             -----ecCCceEEEEEecccccccccc
Confidence                 5678899999999988775543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=89.15  E-value=1.6  Score=27.05  Aligned_cols=76  Identities=13%  Similarity=0.127  Sum_probs=45.4

Q ss_pred             Eeeccc-eeEEEEEEEcCCCCeEEEEEeecCCCchhhHHHHHHHhhhhhHHHHHHHHhccCC-CCCcceeeeeeeecCCC
Q psy2812          27 LIGEGT-YGEVYWAKDVETGDHVAIKIMENIPENIEEIEEEYLVLKDLSIEEEYLVLKDLSV-HPNIPSFYGLYLRRGGQ  104 (152)
Q Consensus        27 ~lg~G~-~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~i~~l~~~~~~~~~~  104 (152)
                      .+..|. -+.||+... ..+..+.+|.-.....  ..            +..|..++..+.. +-.+++++...      
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~--~~------------l~~E~~~l~~L~~~gvpvP~v~~~~------   75 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGAL--NE------------LQDEAARLSWLATTGVPCAAVLDVV------   75 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTT--SC------------HHHHHHHHHHHHTTTCCBCCEEEEE------
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccCH--hH------------HHHHHHHHHHHHhcCCCCCceeeec------
Confidence            344444 356888864 4555678887653221  11            2245555554432 23367777766      


Q ss_pred             CCCceEEEEEcccCCCChH
Q psy2812         105 PEEDQLWFVMELCTGGSVT  123 (152)
Q Consensus       105 ~~~~~~~lv~e~~~~g~L~  123 (152)
                      ..++..+++|++++|.++.
T Consensus        76 ~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          76 TEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             ECSSCEEEEEECCSSEETT
T ss_pred             ccccceEEEEEeeeccccc
Confidence            5667899999999886653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=88.80  E-value=2.3  Score=28.58  Aligned_cols=88  Identities=18%  Similarity=0.110  Sum_probs=45.6

Q ss_pred             ceEEEEEeeccceeEEEEEEEcCCCCeEEEEEeecCCCchhh-HHHHHHHhhhhhHHHHHHHHhccCCC--CCcceeeee
Q psy2812          21 KFKLQELIGEGTYGEVYWAKDVETGDHVAIKIMENIPENIEE-IEEEYLVLKDLSIEEEYLVLKDLSVH--PNIPSFYGL   97 (152)
Q Consensus        21 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~a~K~i~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~--~~i~~l~~~   97 (152)
                      ..+ .+.||.|....||++.....++.+++|.-......... ......     ....|...+..+..+  ..+++++..
T Consensus        28 ~l~-~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~-----R~~~E~~~L~~~~~~~p~~vP~v~~~  101 (392)
T d2pula1          28 TLT-CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTID-----RARIESSALIRQGEHVPHLVPRVFYS  101 (392)
T ss_dssp             CCE-EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTT-----HHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred             Cee-EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHH-----HHHHHHHHHHHhhhhCCCCcceEEEE
Confidence            344 55689999999999987666778888864321100000 000000     012355555544322  345666544


Q ss_pred             eeecCCCCCCceEEEEEcccCCCCh
Q psy2812          98 YLRRGGQPEEDQLWFVMELCTGGSV  122 (152)
Q Consensus        98 ~~~~~~~~~~~~~~lv~e~~~~g~L  122 (152)
                      .        ++..+++||++++..+
T Consensus       102 d--------~~~~~lvmE~L~~~~~  118 (392)
T d2pula1         102 D--------TEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             E--------TTTTEEEECCCTTSEE
T ss_pred             c--------CCCCEEEEeccCCccc
Confidence            3        3345789999977554